ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart21b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TOM20_SOLTU (P92792) Mitochondrial import receptor subunit TOM20... 169 6e-42
2TO202_ARATH (P82873) Mitochondrial import receptor subunit TOM20... 139 8e-33
3TO204_ARATH (P82805) Mitochondrial import receptor subunit TOM20... 138 1e-32
4TO203_ARATH (P82874) Mitochondrial import receptor subunit TOM20... 136 4e-32
5TO201_ARATH (P82872) Mitochondrial import receptor subunit TOM20... 125 9e-29
6SGTB_MOUSE (Q8VD33) Small glutamine-rich tetratricopeptide repea... 32 1.1
7ROK1_NEUCR (Q7SFC8) ATP-dependent RNA helicase rok-1 (EC 3.6.1.-) 32 1.4
8RPIA_BIFLO (Q8G3X9) Ribose-5-phosphate isomerase A (EC 5.3.1.6) ... 32 1.4
9SGTB_HUMAN (Q96EQ0) Small glutamine-rich tetratricopeptide repea... 32 1.4
10SERC_ARATH (Q96255) Phosphoserine aminotransferase, chloroplast ... 32 1.8
11OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide N-acetylgluco... 31 3.1
12OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide N-acetylglu... 31 3.1
13YBL2_SFV3L (P27403) BEL-2 protein 30 4.0
14SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide N-a... 30 4.0
15SYT_CORGL (Q8NPZ0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 30 4.0
16OGT1_CAEEL (O18158) UDP-N-acetylglucosamine--peptide N-acetylglu... 30 5.2
17CU013_HUMAN (O95447) Protein C21orf13 30 6.8
18PEX5_KLULA (Q6CT48) Peroxisomal targeting signal receptor (Perox... 29 8.9
19TRFE_MOUSE (Q921I1) Serotransferrin precursor (Transferrin) (Sid... 29 8.9

>TOM20_SOLTU (P92792) Mitochondrial import receptor subunit TOM20 (Translocase|
           of outer membrane 20 kDa subunit)
          Length = 204

 Score =  169 bits (428), Expect = 6e-42
 Identities = 82/132 (62%), Positives = 102/132 (77%)
 Frame = +1

Query: 175 LFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALR 354
           L FF+ A K+A+ TY +NPLDADNLTRWGGALLELSQ     ES + + DA SKL+EAL 
Sbjct: 10  LLFFEHARKSAETTYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEALT 69

Query: 355 IDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANELYRKSLDLS 534
           ++P K DALWCLGNA TS  F T +  +A   FEKAT CFQ+A D +P+N+LYRKSL+++
Sbjct: 70  VNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYRKSLEVT 129

Query: 535 SKAPELHLEIHR 570
           +KAPELH+EIHR
Sbjct: 130 AKAPELHMEIHR 141



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>TO202_ARATH (P82873) Mitochondrial import receptor subunit TOM20-2 (Translocase|
           of outer membrane 20 kDa subunit 2)
          Length = 210

 Score =  139 bits (349), Expect = 8e-33
 Identities = 70/135 (51%), Positives = 91/135 (67%)
 Frame = +1

Query: 169 EGLFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEA 348
           E L  F+ A K ++A Y  +PLD++NL +WGGALLELSQ    PE+   L DA SKL+EA
Sbjct: 9   ERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLNDAISKLEEA 68

Query: 349 LRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANELYRKSLD 528
           L I+P K  ALWC+ NA T+  F+  +  +A E F+KAT  FQRA + +P N+ YRKSLD
Sbjct: 69  LTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGNDTYRKSLD 128

Query: 529 LSSKAPELHLEIHRQ 573
            S KAPELH++   Q
Sbjct: 129 SSLKAPELHMQFMNQ 143



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>TO204_ARATH (P82805) Mitochondrial import receptor subunit TOM20-4 (Translocase|
           of outer membrane 20 kDa subunit 4)
          Length = 187

 Score =  138 bits (347), Expect = 1e-32
 Identities = 74/129 (57%), Positives = 93/129 (72%)
 Frame = +1

Query: 169 EGLFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEA 348
           E L  F+ A K A+ATY +NPLDA+NLTRW GALLELSQ    P+ +  + +A  KL EA
Sbjct: 8   ERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQTEPKQM--ILEAILKLGEA 65

Query: 349 LRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANELYRKSLD 528
           L IDP K DALW +GNA  S GF +S+  +A++ FEKA+  FQ AV+ +P +ELYRKSL 
Sbjct: 66  LVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYRKSLT 125

Query: 529 LSSKAPELH 555
           L+SKAPELH
Sbjct: 126 LASKAPELH 134



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>TO203_ARATH (P82874) Mitochondrial import receptor subunit TOM20-3 (Translocase|
           of outer membrane 20 kDa subunit 3)
          Length = 202

 Score =  136 bits (343), Expect = 4e-32
 Identities = 65/133 (48%), Positives = 93/133 (69%)
 Frame = +1

Query: 175 LFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALR 354
           +  F+   + A+ TY  NPLDADNLTRWGG LLELSQ H+  ++ + +++A +K +EAL 
Sbjct: 10  ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL 69

Query: 355 IDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANELYRKSLDLS 534
           IDP K +A+WC+GNA TS  F T +  +A   F+ AT  FQ+AVD +P N  Y KSL+++
Sbjct: 70  IDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMT 129

Query: 535 SKAPELHLEIHRQ 573
           +KAP+LH E ++Q
Sbjct: 130 AKAPQLHAEAYKQ 142



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>TO201_ARATH (P82872) Mitochondrial import receptor subunit TOM20-1 (Translocase|
           of outer membrane 20 kDa subunit 1)
          Length = 188

 Score =  125 bits (314), Expect = 9e-29
 Identities = 68/132 (51%), Positives = 86/132 (65%)
 Frame = +1

Query: 175 LFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALR 354
           L FF+   K A+ TY  NP DADNL RWG ALLELSQ  N  +SLK ++DA SKL++A+ 
Sbjct: 4   LNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDAIL 63

Query: 355 IDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANELYRKSLDLS 534
           IDP K DA+WCLGNA TS    T +  QA   F  A   F  AV  +P N++Y KSL+++
Sbjct: 64  IDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLEMA 123

Query: 535 SKAPELHLEIHR 570
            KAP+LH   H+
Sbjct: 124 DKAPQLHTGFHK 135



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>SGTB_MOUSE (Q8VD33) Small glutamine-rich tetratricopeptide repeat-containing|
           protein B
          Length = 304

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 20/73 (27%), Positives = 37/73 (50%)
 Frame = +1

Query: 322 DAESKLDEALRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPA 501
           DA    ++A+ ID   + A   +G A T           A   FE+A   +Q+A+D++P 
Sbjct: 137 DAIKDCEKAIAIDSKYSKAYGRMGLALT-----------AMNKFEEAVTSYQKALDLDPE 185

Query: 502 NELYRKSLDLSSK 540
           N+ Y+ +L ++ +
Sbjct: 186 NDSYKSNLKIAEQ 198



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>ROK1_NEUCR (Q7SFC8) ATP-dependent RNA helicase rok-1 (EC 3.6.1.-)|
          Length = 781

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
 Frame = +1

Query: 208 KATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALRIDPNKAD-ALW 384
           K TY  +P+ ADN+TR G  +    QM + P  L+     E  L++A  ++  K +  + 
Sbjct: 186 KYTYGIHPVLADNITRQGFRVPTEVQMGSLPLQLR----PEMALEKATDVEDVKVEKGID 241

Query: 385 CLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANE 507
            LG APT  G   S  + A +   K     +RA D  P  +
Sbjct: 242 FLGVAPTGSGKTISFLIPAIDAIIK-----RRAEDYTPETD 277



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>RPIA_BIFLO (Q8G3X9) Ribose-5-phosphate isomerase A (EC 5.3.1.6)|
           (Phosphoriboisomerase A) (PRI)
          Length = 232

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 512 YNSFAGSTSTALWKQPVAFSKHSLAWTVSEVKNPREVGAFP 390
           +N   G  +  LW++ VA + + + W V E K    +G FP
Sbjct: 96  FNGIKGGGAALLWEKIVATNSNQIVWIVDESKVVDTIGKFP 136



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>SGTB_HUMAN (Q96EQ0) Small glutamine-rich tetratricopeptide repeat-containing|
           protein B (Small glutamine-rich protein with
           tetratricopeptide repeats 2)
          Length = 304

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 20/73 (27%), Positives = 37/73 (50%)
 Frame = +1

Query: 322 DAESKLDEALRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPA 501
           DA    ++A+ ID   + A   +G A T           A   FE+A   +Q+A+D++P 
Sbjct: 137 DAIKDCEKAIAIDSKYSKAYGRMGLALT-----------ALNKFEEAVTSYQKALDLDPE 185

Query: 502 NELYRKSLDLSSK 540
           N+ Y+ +L ++ +
Sbjct: 186 NDSYKSNLKIAEQ 198



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>SERC_ARATH (Q96255) Phosphoserine aminotransferase, chloroplast precursor (EC|
           2.6.1.52) (PSAT)
          Length = 430

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = +1

Query: 211 ATYDENPL---DADNLTRWGGALLELSQM-HNGPESLKCLEDAESKLDEALRIDPNKADA 378
           AT  EN L    AD L  W G+ + + +M H G E L  ++ AES L + L I P +   
Sbjct: 81  ATLPENVLLKAQAD-LYNWRGSGMSVMEMSHRGKEFLSIIQKAESDLRQLLEI-PQEYSV 138

Query: 379 LWCLGNAPT 405
           L+  G A T
Sbjct: 139 LFLQGGATT 147



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>OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1036

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +1

Query: 316 LEDAESKLDEALRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVE 495
           L++A     EA+RI P  ADA   +GN           T++  +  + A  C+ RA+ + 
Sbjct: 367 LQEALMHYKEAIRISPTFADAYSNMGN-----------TLKEMQDVQGALQCYTRAIQIN 415

Query: 496 PA 501
           PA
Sbjct: 416 PA 417



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>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1046

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +1

Query: 316 LEDAESKLDEALRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVE 495
           L++A     EA+RI P  ADA   +GN           T++  +  + A  C+ RA+ + 
Sbjct: 377 LQEALMHYKEAIRISPTFADAYSNMGN-----------TLKEMQDVQGALQCYTRAIQIN 425

Query: 496 PA 501
           PA
Sbjct: 426 PA 427



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>YBL2_SFV3L (P27403) BEL-2 protein|
          Length = 388

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 292 NGPES-LKCLEDAESKLDEALRIDPNKADALWCLGNAP 402
           + PES L  LED E +   +LRI  N  D +W LGN+P
Sbjct: 15  SNPESGLILLEDTE-RSHSSLRIGQNAPDGVWPLGNSP 51



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>SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SEC (EC 2.4.1.-)
           (Protein SECRET AGENT)
          Length = 977

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/77 (28%), Positives = 33/77 (42%)
 Frame = +1

Query: 184 FDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALRIDP 363
           F  A + +   Y  NPL  DNL   G    +L +         C+    ++ +EALRI P
Sbjct: 69  FKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYD------MCI----ARNEEALRIQP 118

Query: 364 NKADALWCLGNAPTSRG 414
             A+    + NA   +G
Sbjct: 119 QFAECYGNMANAWKEKG 135



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>SYT_CORGL (Q8NPZ0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 695

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 250 TRWGGALLELSQMHNGPESLKCLEDAESKLDEALRIDPNKA 372
           T  G A+ EL   + GPE++ C +DAE +L +   +    A
Sbjct: 29  TAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPETTA 69



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>OGT1_CAEEL (O18158) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase (EC 2.4.1.-) (O-GlcNAc)
           (OGT)
          Length = 1151

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/62 (32%), Positives = 27/62 (43%)
 Frame = +1

Query: 316 LEDAESKLDEALRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVE 495
           L DA     EA+RI P  ADA   +GN     G  ++           A  C+ RA+ + 
Sbjct: 481 LNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSA-----------AIACYNRAIQIN 529

Query: 496 PA 501
           PA
Sbjct: 530 PA 531



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>CU013_HUMAN (O95447) Protein C21orf13|
          Length = 670

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
 Frame = -2

Query: 560 SKCSSGAFD---DKSNDFLYNSFAGSTSTALWKQPVAFSKHSLAWTVSEV---KNPREVG 399
           S+CS G+     D S DFL +    + +    KQPV   K    + VS++   K  +E+ 
Sbjct: 54  SQCSCGSLSSQYDYSEDFLCDCSEKAINRNYLKQPVVKEKEKKKYNVSKISQSKGQKEIS 113

Query: 398 AFPKH 384
              KH
Sbjct: 114 VEKKH 118



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>PEX5_KLULA (Q6CT48) Peroxisomal targeting signal receptor (Peroxin-5) (PTS1|
           receptor)
          Length = 566

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +1

Query: 439 ANECFEKATGCFQRAVDVEPANEL----YRKSLDLSSKAPELHLEIHRQIASQAS 591
           ANE F K   CF+ A++V P +EL       SL  S+++ E     H+ +A + S
Sbjct: 428 ANEEFGKTIDCFRTALEVNPNDELMWNRLGASLANSNRSEEAIQAYHKALALKPS 482



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>TRFE_MOUSE (Q921I1) Serotransferrin precursor (Transferrin) (Siderophilin)|
           (Beta-1-metal-binding globulin)
          Length = 697

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -2

Query: 575 ICLWISKCSSGAFDDKSNDFLYNSFAGSTSTALWKQPVAFSKHSLAWTVSEVKNPRE 405
           +C+   KC+       +N   YN + G+    + K  VAF KH      +E KNP E
Sbjct: 519 LCIGPLKCAP------NNKEEYNGYTGAFRCLVEKGDVAFVKHQTVLDNTEGKNPAE 569


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.132    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,734,141
Number of Sequences: 219361
Number of extensions: 1351844
Number of successful extensions: 4396
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4393
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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