Clone Name | bart21b01 |
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Clone Library Name | barley_pub |
>TOM20_SOLTU (P92792) Mitochondrial import receptor subunit TOM20 (Translocase| of outer membrane 20 kDa subunit) Length = 204 Score = 169 bits (428), Expect = 6e-42 Identities = 82/132 (62%), Positives = 102/132 (77%) Frame = +1 Query: 175 LFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALR 354 L FF+ A K+A+ TY +NPLDADNLTRWGGALLELSQ ES + + DA SKL+EAL Sbjct: 10 LLFFEHARKSAETTYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEALT 69 Query: 355 IDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANELYRKSLDLS 534 ++P K DALWCLGNA TS F T + +A FEKAT CFQ+A D +P+N+LYRKSL+++ Sbjct: 70 VNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYRKSLEVT 129 Query: 535 SKAPELHLEIHR 570 +KAPELH+EIHR Sbjct: 130 AKAPELHMEIHR 141
>TO202_ARATH (P82873) Mitochondrial import receptor subunit TOM20-2 (Translocase| of outer membrane 20 kDa subunit 2) Length = 210 Score = 139 bits (349), Expect = 8e-33 Identities = 70/135 (51%), Positives = 91/135 (67%) Frame = +1 Query: 169 EGLFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEA 348 E L F+ A K ++A Y +PLD++NL +WGGALLELSQ PE+ L DA SKL+EA Sbjct: 9 ERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLNDAISKLEEA 68 Query: 349 LRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANELYRKSLD 528 L I+P K ALWC+ NA T+ F+ + +A E F+KAT FQRA + +P N+ YRKSLD Sbjct: 69 LTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGNDTYRKSLD 128 Query: 529 LSSKAPELHLEIHRQ 573 S KAPELH++ Q Sbjct: 129 SSLKAPELHMQFMNQ 143
>TO204_ARATH (P82805) Mitochondrial import receptor subunit TOM20-4 (Translocase| of outer membrane 20 kDa subunit 4) Length = 187 Score = 138 bits (347), Expect = 1e-32 Identities = 74/129 (57%), Positives = 93/129 (72%) Frame = +1 Query: 169 EGLFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEA 348 E L F+ A K A+ATY +NPLDA+NLTRW GALLELSQ P+ + + +A KL EA Sbjct: 8 ERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQTEPKQM--ILEAILKLGEA 65 Query: 349 LRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANELYRKSLD 528 L IDP K DALW +GNA S GF +S+ +A++ FEKA+ FQ AV+ +P +ELYRKSL Sbjct: 66 LVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYRKSLT 125 Query: 529 LSSKAPELH 555 L+SKAPELH Sbjct: 126 LASKAPELH 134
>TO203_ARATH (P82874) Mitochondrial import receptor subunit TOM20-3 (Translocase| of outer membrane 20 kDa subunit 3) Length = 202 Score = 136 bits (343), Expect = 4e-32 Identities = 65/133 (48%), Positives = 93/133 (69%) Frame = +1 Query: 175 LFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALR 354 + F+ + A+ TY NPLDADNLTRWGG LLELSQ H+ ++ + +++A +K +EAL Sbjct: 10 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL 69 Query: 355 IDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANELYRKSLDLS 534 IDP K +A+WC+GNA TS F T + +A F+ AT FQ+AVD +P N Y KSL+++ Sbjct: 70 IDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMT 129 Query: 535 SKAPELHLEIHRQ 573 +KAP+LH E ++Q Sbjct: 130 AKAPQLHAEAYKQ 142
>TO201_ARATH (P82872) Mitochondrial import receptor subunit TOM20-1 (Translocase| of outer membrane 20 kDa subunit 1) Length = 188 Score = 125 bits (314), Expect = 9e-29 Identities = 68/132 (51%), Positives = 86/132 (65%) Frame = +1 Query: 175 LFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALR 354 L FF+ K A+ TY NP DADNL RWG ALLELSQ N +SLK ++DA SKL++A+ Sbjct: 4 LNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDAIL 63 Query: 355 IDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANELYRKSLDLS 534 IDP K DA+WCLGNA TS T + QA F A F AV +P N++Y KSL+++ Sbjct: 64 IDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLEMA 123 Query: 535 SKAPELHLEIHR 570 KAP+LH H+ Sbjct: 124 DKAPQLHTGFHK 135
>SGTB_MOUSE (Q8VD33) Small glutamine-rich tetratricopeptide repeat-containing| protein B Length = 304 Score = 32.3 bits (72), Expect = 1.1 Identities = 20/73 (27%), Positives = 37/73 (50%) Frame = +1 Query: 322 DAESKLDEALRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPA 501 DA ++A+ ID + A +G A T A FE+A +Q+A+D++P Sbjct: 137 DAIKDCEKAIAIDSKYSKAYGRMGLALT-----------AMNKFEEAVTSYQKALDLDPE 185 Query: 502 NELYRKSLDLSSK 540 N+ Y+ +L ++ + Sbjct: 186 NDSYKSNLKIAEQ 198
>ROK1_NEUCR (Q7SFC8) ATP-dependent RNA helicase rok-1 (EC 3.6.1.-)| Length = 781 Score = 32.0 bits (71), Expect = 1.4 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 1/101 (0%) Frame = +1 Query: 208 KATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALRIDPNKAD-ALW 384 K TY +P+ ADN+TR G + QM + P L+ E L++A ++ K + + Sbjct: 186 KYTYGIHPVLADNITRQGFRVPTEVQMGSLPLQLR----PEMALEKATDVEDVKVEKGID 241 Query: 385 CLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPANE 507 LG APT G S + A + K +RA D P + Sbjct: 242 FLGVAPTGSGKTISFLIPAIDAIIK-----RRAEDYTPETD 277
>RPIA_BIFLO (Q8G3X9) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 232 Score = 32.0 bits (71), Expect = 1.4 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -2 Query: 512 YNSFAGSTSTALWKQPVAFSKHSLAWTVSEVKNPREVGAFP 390 +N G + LW++ VA + + + W V E K +G FP Sbjct: 96 FNGIKGGGAALLWEKIVATNSNQIVWIVDESKVVDTIGKFP 136
>SGTB_HUMAN (Q96EQ0) Small glutamine-rich tetratricopeptide repeat-containing| protein B (Small glutamine-rich protein with tetratricopeptide repeats 2) Length = 304 Score = 32.0 bits (71), Expect = 1.4 Identities = 20/73 (27%), Positives = 37/73 (50%) Frame = +1 Query: 322 DAESKLDEALRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVEPA 501 DA ++A+ ID + A +G A T A FE+A +Q+A+D++P Sbjct: 137 DAIKDCEKAIAIDSKYSKAYGRMGLALT-----------ALNKFEEAVTSYQKALDLDPE 185 Query: 502 NELYRKSLDLSSK 540 N+ Y+ +L ++ + Sbjct: 186 NDSYKSNLKIAEQ 198
>SERC_ARATH (Q96255) Phosphoserine aminotransferase, chloroplast precursor (EC| 2.6.1.52) (PSAT) Length = 430 Score = 31.6 bits (70), Expect = 1.8 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Frame = +1 Query: 211 ATYDENPL---DADNLTRWGGALLELSQM-HNGPESLKCLEDAESKLDEALRIDPNKADA 378 AT EN L AD L W G+ + + +M H G E L ++ AES L + L I P + Sbjct: 81 ATLPENVLLKAQAD-LYNWRGSGMSVMEMSHRGKEFLSIIQKAESDLRQLLEI-PQEYSV 138 Query: 379 LWCLGNAPT 405 L+ G A T Sbjct: 139 LFLQGGATT 147
>OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase 110 kDa subunit (EC 2.4.1.-) (O-GlcNAc transferase p110 subunit) Length = 1036 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = +1 Query: 316 LEDAESKLDEALRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVE 495 L++A EA+RI P ADA +GN T++ + + A C+ RA+ + Sbjct: 367 LQEALMHYKEAIRISPTFADAYSNMGN-----------TLKEMQDVQGALQCYTRAIQIN 415 Query: 496 PA 501 PA Sbjct: 416 PA 417
>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase 110 kDa subunit (EC 2.4.1.-) (O-GlcNAc transferase p110 subunit) Length = 1046 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = +1 Query: 316 LEDAESKLDEALRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVE 495 L++A EA+RI P ADA +GN T++ + + A C+ RA+ + Sbjct: 377 LQEALMHYKEAIRISPTFADAYSNMGN-----------TLKEMQDVQGALQCYTRAIQIN 425 Query: 496 PA 501 PA Sbjct: 426 PA 427
>YBL2_SFV3L (P27403) BEL-2 protein| Length = 388 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +1 Query: 292 NGPES-LKCLEDAESKLDEALRIDPNKADALWCLGNAP 402 + PES L LED E + +LRI N D +W LGN+P Sbjct: 15 SNPESGLILLEDTE-RSHSSLRIGQNAPDGVWPLGNSP 51
>SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase SEC (EC 2.4.1.-) (Protein SECRET AGENT) Length = 977 Score = 30.4 bits (67), Expect = 4.0 Identities = 22/77 (28%), Positives = 33/77 (42%) Frame = +1 Query: 184 FDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALRIDP 363 F A + + Y NPL DNL G +L + C+ ++ +EALRI P Sbjct: 69 FKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYD------MCI----ARNEEALRIQP 118 Query: 364 NKADALWCLGNAPTSRG 414 A+ + NA +G Sbjct: 119 QFAECYGNMANAWKEKG 135
>SYT_CORGL (Q8NPZ0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 695 Score = 30.4 bits (67), Expect = 4.0 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +1 Query: 250 TRWGGALLELSQMHNGPESLKCLEDAESKLDEALRIDPNKA 372 T G A+ EL + GPE++ C +DAE +L + + A Sbjct: 29 TAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPETTA 69
>OGT1_CAEEL (O18158) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase (EC 2.4.1.-) (O-GlcNAc) (OGT) Length = 1151 Score = 30.0 bits (66), Expect = 5.2 Identities = 20/62 (32%), Positives = 27/62 (43%) Frame = +1 Query: 316 LEDAESKLDEALRIDPNKADALWCLGNAPTSRGFFTSETVQANECFEKATGCFQRAVDVE 495 L DA EA+RI P ADA +GN G ++ A C+ RA+ + Sbjct: 481 LNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSA-----------AIACYNRAIQIN 529 Query: 496 PA 501 PA Sbjct: 530 PA 531
>CU013_HUMAN (O95447) Protein C21orf13| Length = 670 Score = 29.6 bits (65), Expect = 6.8 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%) Frame = -2 Query: 560 SKCSSGAFD---DKSNDFLYNSFAGSTSTALWKQPVAFSKHSLAWTVSEV---KNPREVG 399 S+CS G+ D S DFL + + + KQPV K + VS++ K +E+ Sbjct: 54 SQCSCGSLSSQYDYSEDFLCDCSEKAINRNYLKQPVVKEKEKKKYNVSKISQSKGQKEIS 113 Query: 398 AFPKH 384 KH Sbjct: 114 VEKKH 118
>PEX5_KLULA (Q6CT48) Peroxisomal targeting signal receptor (Peroxin-5) (PTS1| receptor) Length = 566 Score = 29.3 bits (64), Expect = 8.9 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Frame = +1 Query: 439 ANECFEKATGCFQRAVDVEPANEL----YRKSLDLSSKAPELHLEIHRQIASQAS 591 ANE F K CF+ A++V P +EL SL S+++ E H+ +A + S Sbjct: 428 ANEEFGKTIDCFRTALEVNPNDELMWNRLGASLANSNRSEEAIQAYHKALALKPS 482
>TRFE_MOUSE (Q921I1) Serotransferrin precursor (Transferrin) (Siderophilin)| (Beta-1-metal-binding globulin) Length = 697 Score = 29.3 bits (64), Expect = 8.9 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = -2 Query: 575 ICLWISKCSSGAFDDKSNDFLYNSFAGSTSTALWKQPVAFSKHSLAWTVSEVKNPRE 405 +C+ KC+ +N YN + G+ + K VAF KH +E KNP E Sbjct: 519 LCIGPLKCAP------NNKEEYNGYTGAFRCLVEKGDVAFVKHQTVLDNTEGKNPAE 569 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.132 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,734,141 Number of Sequences: 219361 Number of extensions: 1351844 Number of successful extensions: 4396 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 4216 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4393 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)