ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart21a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475682.1| Oryza sativa (japonica cultivar-group), predic... 254 3e-64
2dbj|AK072992.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 3e-64
3gb|AY109667.1| Zea mays CL644_1 mRNA sequence 147 5e-32
4gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 111 3e-21
5gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome... 111 3e-21
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
7ref|NM_191431.1| Oryza sativa (japonica cultivar-group), predic... 105 2e-19
8dbj|AK060471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
9dbj|AK103491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 4e-17
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
11dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
12gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 46 0.13
13gb|AC159429.1| Trypanosoma brucei chromosome 7 clone RPCI93-28B1... 46 0.13
14ref|XM_819184.1| Trypanosoma brucei TREU927 clone RPCI93-28B13 h... 46 0.13
15gb|BT016862.1| Zea mays clone Contig695 mRNA sequence 44 0.50
16gb|AF229829.1|AF229829 Pseudomonas fluorescens strain ATCC 17400... 44 0.50
17gb|AC164550.2| Mus musculus BAC clone RP23-469K15 from chromosom... 40 7.9
18gb|AC119432.7| Mus musculus chromosome 18, clone RP24-114K9, com... 40 7.9
19gb|AC101859.18| Mus musculus chromosome 1, clone RP23-309H12, co... 40 7.9
20gb|AC010503.8| Homo sapiens chromosome 19 clone CTD-2396E7, comp... 40 7.9
21gb|AC107828.16| Mus musculus chromosome 18, clone RP23-213N4, co... 40 7.9
22gb|AC130661.14| Mus musculus chromosome 12, clone RP23-337K17, c... 40 7.9
23dbj|AB084364.1| Pseudocarteria mucosa chloroplast psaB gene for ... 40 7.9 
>ref|XM_475682.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 780

 Score =  254 bits (128), Expect = 3e-64
 Identities = 250/292 (85%), Gaps = 9/292 (3%)
 Strand = Plus / Plus

                                                                       
Query: 272 aaccctaacccggtcgtcgccaaggtcgtgctgtccctcgaccccctcagctccgccgag 331
           ||||||||||| ||||||||||||||||| || ||||| |||| |||| ||||||  |||
Sbjct: 127 aaccctaaccccgtcgtcgccaaggtcgtcctctcccttgacctcctccgctccgaggag 186

                                                                       
Query: 332 ccttccctccagttcaagatggagatgtctcaaactagtgtagctagcacttgcaatcta 391
           || |||||||||||||||||||||||| ||||||||         | |||| |||||  |
Sbjct: 187 ccctccctccagttcaagatggagatggctcaaact---------aacactggcaataca 237

                                                                       
Query: 392 ccaaagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctgag 451
           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 238 ccaaagagttactccttgaatatgtccaaggattttgtaccaatgtgtgttttctctgag 297

                                                                       
Query: 452 actaatcaaggaaaactctcatgcgaaggaaaagttgagcataaattcgacatggaacct 511
            |||| ||||| ||||| ||||| ||||||||||| ||||||||||| |||||| | |||
Sbjct: 298 tctaaccaagggaaactttcatgtgaaggaaaagtcgagcataaatttgacatgaagcct 357

                                                               
Query: 512 cacaaggataacttattgaactacgcaaagttatgccgtgaaagaacacaaa 563
           ||||  ||||| ||  ||||||| | |||||||||||||||||| |||||||
Sbjct: 358 cacagtgataatttggtgaactatggaaagttatgccgtgaaaggacacaaa 409



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                       
Query: 152 atgggcgacgaggcgaagtacctggagacggcgcgggcggattgctccgtgtggctcatg 211
           |||||||| ||||| |||||||| |||||||||||||| ||  ||||||||||||| |||
Sbjct: 1   atgggcgaggaggccaagtacctcgagacggcgcgggccgagcgctccgtgtggctgatg 60

                                                  
Query: 212 aagtgnnnnnnngtcgtctcccaggcttggcagggcgcc 250
           |||||       |||||||| || || ||||||||||||
Sbjct: 61  aagtgccccccggtcgtctcgcacgcctggcagggcgcc 99
to top
>dbj|AK072992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147N17, full
           insert sequence
          Length = 1290

 Score =  254 bits (128), Expect = 3e-64
 Identities = 250/292 (85%), Gaps = 9/292 (3%)
 Strand = Plus / Plus

                                                                       
Query: 272 aaccctaacccggtcgtcgccaaggtcgtgctgtccctcgaccccctcagctccgccgag 331
           ||||||||||| ||||||||||||||||| || ||||| |||| |||| ||||||  |||
Sbjct: 299 aaccctaaccccgtcgtcgccaaggtcgtcctctcccttgacctcctccgctccgaggag 358

                                                                       
Query: 332 ccttccctccagttcaagatggagatgtctcaaactagtgtagctagcacttgcaatcta 391
           || |||||||||||||||||||||||| ||||||||         | |||| |||||  |
Sbjct: 359 ccctccctccagttcaagatggagatggctcaaact---------aacactggcaataca 409

                                                                       
Query: 392 ccaaagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctgag 451
           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 410 ccaaagagttactccttgaatatgtccaaggattttgtaccaatgtgtgttttctctgag 469

                                                                       
Query: 452 actaatcaaggaaaactctcatgcgaaggaaaagttgagcataaattcgacatggaacct 511
            |||| ||||| ||||| ||||| ||||||||||| ||||||||||| |||||| | |||
Sbjct: 470 tctaaccaagggaaactttcatgtgaaggaaaagtcgagcataaatttgacatgaagcct 529

                                                               
Query: 512 cacaaggataacttattgaactacgcaaagttatgccgtgaaagaacacaaa 563
           ||||  ||||| ||  ||||||| | |||||||||||||||||| |||||||
Sbjct: 530 cacagtgataatttggtgaactatggaaagttatgccgtgaaaggacacaaa 581



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 83/100 (83%)
 Strand = Plus / Plus

                                                                       
Query: 151 gatgggcgacgaggcgaagtacctggagacggcgcgggcggattgctccgtgtggctcat 210
           ||||||||| ||||| |||||||| |||||||||||||| ||  ||||||||||||| ||
Sbjct: 172 gatgggcgaggaggccaagtacctcgagacggcgcgggccgagcgctccgtgtggctgat 231

                                                   
Query: 211 gaagtgnnnnnnngtcgtctcccaggcttggcagggcgcc 250
           ||||||       |||||||| || || ||||||||||||
Sbjct: 232 gaagtgccccccggtcgtctcgcacgcctggcagggcgcc 271
to top
>gb|AY109667.1| Zea mays CL644_1 mRNA sequence
          Length = 858

 Score =  147 bits (74), Expect = 5e-32
 Identities = 143/166 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 aagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctgagact 454
           ||||| ||||| |||||||||||||| ||||| || || |||||||||||||| ||  ||
Sbjct: 28  aagagctactctttgaatatgttcaaagatttcgtgcctatgtgtgttttctccgaatct 87

                                                                       
Query: 455 aatcaaggaaaactctcatgcgaaggaaaagttgagcataaattcgacatggaacctcac 514
           || ||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 88  aaccaagggaaactttcatgcgaaggaaaagtcgagcataaatttgacatggaacctcac 147

                                                         
Query: 515 aaggataacttattgaactacgcaaagttatgccgtgaaagaacac 560
           |  ||||| ||   |||||| | ||||||||| |||||||||||||
Sbjct: 148 agtgataatttggcgaactatggaaagttatgtcgtgaaagaacac 193
to top
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17,
              complete sequence
          Length = 139829

 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                          
Query: 391    accaaagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctga 450
              |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 131410 accaaagagttactccttgaatatgtccaaggattttgtaccaatgtgtgttttctctga 131351

                          
Query: 451    gactaatcaagg 462
              | |||| |||||
Sbjct: 131350 gtctaaccaagg 131339



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                          
Query: 464    aaactctcatgcgaaggaaaagttgagcataaattcgacatggaacctcacaaggataac 523
              ||||| ||||| ||||||||||| ||||||||||| |||||| | |||||||  ||||| 
Sbjct: 130612 aaactttcatgtgaaggaaaagtcgagcataaatttgacatgaagcctcacagtgataat 130553

                                                      
Query: 524    ttattgaactacgcaaagttatgccgtgaaagaacacaaa 563
              ||  ||||||| | |||||||||||||||||| |||||||
Sbjct: 130552 ttggtgaactatggaaagttatgccgtgaaaggacacaaa 130513



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                          
Query: 151    gatgggcgacgaggcgaagtacctggagacggcgcgggcggattgctccgtgtggctcat 210
              ||||||||| ||||| |||||||| |||||||||||||| ||  ||||||||||||| ||
Sbjct: 132093 gatgggcgaggaggccaagtacctcgagacggcgcgggccgagcgctccgtgtggctgat 132034

                                                      
Query: 211    gaagtgnnnnnnngtcgtctcccaggcttggcagggcgcc 250
              ||||||       |||||||| || || ||||||||||||
Sbjct: 132033 gaagtgccccccggtcgtctcgcacgcctggcagggcgcc 131994



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                          
Query: 272    aaccctaacccggtcgtcgccaaggtcgtgctgtccctcgaccccctcagctccgccgag 331
              ||||||||||| ||||||||||||||||| || ||||| |||| |||| ||||||  |||
Sbjct: 131966 aaccctaaccccgtcgtcgccaaggtcgtcctctcccttgacctcctccgctccgaggag 131907

                          
Query: 332    ccttccctccag 343
              || |||||||||
Sbjct: 131906 ccctccctccag 131895



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 341    cagttcaagatggagatgtctcaaacta 368
              |||||||||||||||||| |||||||||
Sbjct: 131451 cagttcaagatggagatggctcaaacta 131424
to top
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11,
            complete sequence
          Length = 162772

 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                        
Query: 391  accaaagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctga 450
            |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 5212 accaaagagttactccttgaatatgtccaaggattttgtaccaatgtgtgttttctctga 5153

                        
Query: 451  gactaatcaagg 462
            | |||| |||||
Sbjct: 5152 gtctaaccaagg 5141



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                        
Query: 464  aaactctcatgcgaaggaaaagttgagcataaattcgacatggaacctcacaaggataac 523
            ||||| ||||| ||||||||||| ||||||||||| |||||| | |||||||  ||||| 
Sbjct: 4414 aaactttcatgtgaaggaaaagtcgagcataaatttgacatgaagcctcacagtgataat 4355

                                                    
Query: 524  ttattgaactacgcaaagttatgccgtgaaagaacacaaa 563
            ||  ||||||| | |||||||||||||||||| |||||||
Sbjct: 4354 ttggtgaactatggaaagttatgccgtgaaaggacacaaa 4315



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                        
Query: 151  gatgggcgacgaggcgaagtacctggagacggcgcgggcggattgctccgtgtggctcat 210
            ||||||||| ||||| |||||||| |||||||||||||| ||  ||||||||||||| ||
Sbjct: 5895 gatgggcgaggaggccaagtacctcgagacggcgcgggccgagcgctccgtgtggctgat 5836

                                                    
Query: 211  gaagtgnnnnnnngtcgtctcccaggcttggcagggcgcc 250
            ||||||       |||||||| || || ||||||||||||
Sbjct: 5835 gaagtgccccccggtcgtctcgcacgcctggcagggcgcc 5796



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                        
Query: 272  aaccctaacccggtcgtcgccaaggtcgtgctgtccctcgaccccctcagctccgccgag 331
            ||||||||||| ||||||||||||||||| || ||||| |||| |||| ||||||  |||
Sbjct: 5768 aaccctaaccccgtcgtcgccaaggtcgtcctctcccttgacctcctccgctccgaggag 5709

                        
Query: 332  ccttccctccag 343
            || |||||||||
Sbjct: 5708 ccctccctccag 5697



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 341  cagttcaagatggagatgtctcaaacta 368
            |||||||||||||||||| |||||||||
Sbjct: 5253 cagttcaagatggagatggctcaaacta 5226
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                            
Query: 391      accaaagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctga 450
                |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 25062557 accaaagagttactccttgaatatgtccaaggattttgtaccaatgtgtgttttctctga 25062498

                            
Query: 451      gactaatcaagg 462
                | |||| |||||
Sbjct: 25062497 gtctaaccaagg 25062486



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                            
Query: 464      aaactctcatgcgaaggaaaagttgagcataaattcgacatggaacctcacaaggataac 523
                ||||| ||||| ||||||||||| ||||||||||| |||||| | |||||||  ||||| 
Sbjct: 25061759 aaactttcatgtgaaggaaaagtcgagcataaatttgacatgaagcctcacagtgataat 25061700

                                                        
Query: 524      ttattgaactacgcaaagttatgccgtgaaagaacacaaa 563
                ||  ||||||| | |||||||||||||||||| |||||||
Sbjct: 25061699 ttggtgaactatggaaagttatgccgtgaaaggacacaaa 25061660



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                            
Query: 151      gatgggcgacgaggcgaagtacctggagacggcgcgggcggattgctccgtgtggctcat 210
                ||||||||| ||||| |||||||| |||||||||||||| ||  ||||||||||||| ||
Sbjct: 25063240 gatgggcgaggaggccaagtacctcgagacggcgcgggccgagcgctccgtgtggctgat 25063181

                                                        
Query: 211      gaagtgnnnnnnngtcgtctcccaggcttggcagggcgcc 250
                ||||||       |||||||| || || ||||||||||||
Sbjct: 25063180 gaagtgccccccggtcgtctcgcacgcctggcagggcgcc 25063141



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 272      aaccctaacccggtcgtcgccaaggtcgtgctgtccctcgaccccctcagctccgccgag 331
                ||||||||||| ||||||||||||||||| || ||||| |||| |||| ||||||  |||
Sbjct: 25063113 aaccctaaccccgtcgtcgccaaggtcgtcctctcccttgacctcctccgctccgaggag 25063054

                            
Query: 332      ccttccctccag 343
                || |||||||||
Sbjct: 25063053 ccctccctccag 25063042



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 341      cagttcaagatggagatgtctcaaacta 368
                |||||||||||||||||| |||||||||
Sbjct: 25062598 cagttcaagatggagatggctcaaacta 25062571
to top
>ref|NM_191431.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 786

 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                       
Query: 391 accaaagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctga 450
           ||||||||||||||||||||| ||||||||||||||||| || |||||||| || |||||
Sbjct: 231 accaaagagttactccttgaacatgttcaaggattttgtgccaatgtgtgtcttttctga 290

                                                                       
Query: 451 gactaatcaaggaaaactctcatgcgaaggaaaagttgagcataaattcgacatggaacc 510
             | || ||||| || || ||||||||||| ||||| | ||| ||||| |||||||||||
Sbjct: 291 atccaaccaagggaagctttcatgcgaagggaaagtcgggcacaaatttgacatggaacc 350

                
Query: 511 tcaca 515
            ||||
Sbjct: 351 gcaca 355



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 161 gaggcgaagtacctggagacggcgcgggcggattgctccgtgtggctcatgaagtg 216
           ||||||||| | ||||||||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 10  gaggcgaagaatctggagacggcccgggccgaccgctccgtgtggctcatgaagtg 65



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 342 agttcaagatggagatgtctcaaac 366
           ||||||||||||||||| |||||||
Sbjct: 191 agttcaagatggagatggctcaaac 215



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 aaccctaacccggtcgtcgccaag 295
           ||||||||||| ||||||||||||
Sbjct: 169 aaccctaaccccgtcgtcgccaag 192
to top
>dbj|AK060471.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E06, full
           insert sequence
          Length = 1325

 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                       
Query: 391 accaaagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctga 450
           ||||||||||||||||||||| ||||||||||||||||| || |||||||| || |||||
Sbjct: 405 accaaagagttactccttgaacatgttcaaggattttgtgccaatgtgtgtcttttctga 464

                                                                       
Query: 451 gactaatcaaggaaaactctcatgcgaaggaaaagttgagcataaattcgacatggaacc 510
             | || ||||| || || ||||||||||| ||||| | ||| ||||| |||||||||||
Sbjct: 465 atccaaccaagggaagctttcatgcgaagggaaagtcgggcacaaatttgacatggaacc 524

                
Query: 511 tcaca 515
            ||||
Sbjct: 525 gcaca 529



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 161 gaggcgaagtacctggagacggcgcgggcggattgctccgtgtggctcatgaagtg 216
           ||||||||| | ||||||||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 136 gaggcgaagaatctggagacggcccgggccgaccgctccgtgtggctcatgaagtg 191



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 272 aaccctaacccggtcgtcgccaaggtcgtgctgtccctcgaccccctcagctccgccgag 331
           ||||||||||| ||||||||||||||| |  | ||||||||||| ||| ||||||  || 
Sbjct: 295 aaccctaaccccgtcgtcgccaaggtcatcgtctccctcgacccgctccgctccgaagat 354

                                              
Query: 332 ccttccctccagttcaagatggagatgtctcaaac 366
           |     ||||||||||||||||||||| |||||||
Sbjct: 355 cagcagctccagttcaagatggagatggctcaaac 389
to top
>dbj|AK103491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130N17, full
           insert sequence
          Length = 1276

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 107/125 (85%), Gaps = 1/125 (0%)
 Strand = Plus / Plus

                                                                       
Query: 391 accaaagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctga 450
           ||||||||||||||||||||| ||||||||||||||||| || |||||||| || |||||
Sbjct: 408 accaaagagttactccttgaacatgttcaaggattttgtgccaatgtgtgtctt-tctga 466

                                                                       
Query: 451 gactaatcaaggaaaactctcatgcgaaggaaaagttgagcataaattcgacatggaacc 510
             | || ||||| || || ||||||||||| ||||| | ||| ||||| |||||||||||
Sbjct: 467 atccaaccaagggaagctttcatgcgaagggaaagtcgggcacaaatttgacatggaacc 526

                
Query: 511 tcaca 515
            ||||
Sbjct: 527 gcaca 531



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 161 gaggcgaagtacctggagacggcgcgggcggattgctccgtgtggctcatgaagtg 216
           ||||||||| | ||||||||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 139 gaggcgaagaatctggagacggcccgggccgaccgctccgtgtggctcatgaagtg 194



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 272 aaccctaacccggtcgtcgccaaggtcgtgctgtccctcgaccccctcagctccgccgag 331
           ||||||||||| ||||||||||||||| |  | ||||||||||| ||| ||||||  || 
Sbjct: 298 aaccctaaccccgtcgtcgccaaggtcatcgtctccctcgacccgctccgctccgaagat 357

                                              
Query: 332 ccttccctccagttcaagatggagatgtctcaaac 366
           |     ||||||||||||||||||||| |||||||
Sbjct: 358 cagcagctccagttcaagatggagatggctcaaac 392
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                            
Query: 391      accaaagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctga 450
                ||||||||||||||||||||| ||||||||||||||||| || |||||||| || |||||
Sbjct: 32593858 accaaagagttactccttgaacatgttcaaggattttgtgccaatgtgtgtcttttctga 32593799



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                        
Query: 161      gaggcgaagtacctggagacggcgcgggcggattgctccgtgtggctcatgaagtg 216
                ||||||||| | ||||||||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 32594927 gaggcgaagaatctggagacggcccgggccgaccgctccgtgtggctcatgaagtg 32594872



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 272      aaccctaacccggtcgtcgccaaggtcgtgctgtccctcgaccccctcagctccg 326
                ||||||||||| ||||||||||||||| |  | ||||||||||| ||| ||||||
Sbjct: 32594768 aaccctaaccccgtcgtcgccaaggtcatcgtctccctcgacccgctccgctccg 32594714



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 341      cagttcaagatggagatgtctcaaac 366
                |||||||||||||||||| |||||||
Sbjct: 32593899 cagttcaagatggagatggctcaaac 32593874



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 470      tcatgcgaaggaaaagttgagcataaattcgacatggaacctcaca 515
                ||||||||||| ||||| | ||| ||||| ||||||||||| ||||
Sbjct: 32592589 tcatgcgaagggaaagtcgggcacaaatttgacatggaaccgcaca 32592544
to top
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0695H10
          Length = 136883

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                         
Query: 391   accaaagagttactccttgaatatgttcaaggattttgtacccatgtgtgttttctctga 450
             ||||||||||||||||||||| ||||||||||||||||| || |||||||| || |||||
Sbjct: 56653 accaaagagttactccttgaacatgttcaaggattttgtgccaatgtgtgtcttttctga 56594



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 161   gaggcgaagtacctggagacggcgcgggcggattgctccgtgtggctcatgaagtg 216
             ||||||||| | ||||||||||| ||||| ||  ||||||||||||||||||||||
Sbjct: 57722 gaggcgaagaatctggagacggcccgggccgaccgctccgtgtggctcatgaagtg 57667



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 272   aaccctaacccggtcgtcgccaaggtcgtgctgtccctcgaccccctcagctccg 326
             ||||||||||| ||||||||||||||| |  | ||||||||||| ||| ||||||
Sbjct: 57563 aaccctaaccccgtcgtcgccaaggtcatcgtctccctcgacccgctccgctccg 57509



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 341   cagttcaagatggagatgtctcaaac 366
             |||||||||||||||||| |||||||
Sbjct: 56694 cagttcaagatggagatggctcaaac 56669



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 470   tcatgcgaaggaaaagttgagcataaattcgacatggaacctcaca 515
             ||||||||||| ||||| | ||| ||||| ||||||||||| ||||
Sbjct: 55384 tcatgcgaagggaaagtcgggcacaaatttgacatggaaccgcaca 55339
to top
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 333    cttccctccagttcaagatggagatgt 359
              |||||||||||||||| ||||||||||
Sbjct: 873851 cttccctccagttcaaaatggagatgt 873877
to top
>gb|AC159429.1| Trypanosoma brucei chromosome 7 clone RPCI93-28B13, complete sequence
          Length = 152128

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 333    cttccctccagttcaagatggagatgt 359
              |||||||||||||||| ||||||||||
Sbjct: 119026 cttccctccagttcaaaatggagatgt 119000
to top
>ref|XM_819184.1| Trypanosoma brucei TREU927 clone RPCI93-28B13 hypothetical protein
           (Tb927.7.3340) partial mRNA
          Length = 1533

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 333 cttccctccagttcaagatggagatgt 359
           |||||||||||||||| ||||||||||
Sbjct: 748 cttccctccagttcaaaatggagatgt 722
to top
>gb|BT016862.1| Zea mays clone Contig695 mRNA sequence
          Length = 1573

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 286  cgtcgccaaggtcgtgctgtccctcg 311
            ||||||||||| ||||||||||||||
Sbjct: 1352 cgtcgccaaggacgtgctgtccctcg 1327
to top
>gb|AF229829.1|AF229829 Pseudomonas fluorescens strain ATCC 17400 trehalose operon, complete
            sequence
          Length = 4487

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 113  aaatcgcgagaccacccgcggc 134
            ||||||||||||||||||||||
Sbjct: 3590 aaatcgcgagaccacccgcggc 3569
to top
>gb|AC164550.2| Mus musculus BAC clone RP23-469K15 from chromosome 12, complete
            sequence
          Length = 161775

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  agccttccctccagttcaag 349
            ||||||||||||||||||||
Sbjct: 8796 agccttccctccagttcaag 8815
to top
>gb|AC119432.7| Mus musculus chromosome 18, clone RP24-114K9, complete sequence
          Length = 190138

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 408  tgaatatgttcaaggatttt 427
            ||||||||||||||||||||
Sbjct: 5142 tgaatatgttcaaggatttt 5161
to top
>gb|AC101859.18| Mus musculus chromosome 1, clone RP23-309H12, complete sequence
          Length = 217332

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 427    tgtacccatgtgtgttttct 446
              ||||||||||||||||||||
Sbjct: 126688 tgtacccatgtgtgttttct 126707
to top
>gb|AC010503.8| Homo sapiens chromosome 19 clone CTD-2396E7, complete sequence
          Length = 141295

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   tctcccaggcttggcagggc 247
             ||||||||||||||||||||
Sbjct: 42394 tctcccaggcttggcagggc 42375
to top
>gb|AC107828.16| Mus musculus chromosome 18, clone RP23-213N4, complete sequence
          Length = 212092

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    tgaatatgttcaaggatttt 427
              ||||||||||||||||||||
Sbjct: 144866 tgaatatgttcaaggatttt 144885
to top
>gb|AC130661.14| Mus musculus chromosome 12, clone RP23-337K17, complete sequence
          Length = 199656

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   agccttccctccagttcaag 349
             ||||||||||||||||||||
Sbjct: 81117 agccttccctccagttcaag 81098
to top
>dbj|AB084364.1| Pseudocarteria mucosa chloroplast psaB gene for P700 chlorophyll
           a-apoprotein A2, partial cds, strain:NIES-522
          Length = 1392

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 556 aacacaaagtctatggttaa 575
           ||||||||||||||||||||
Sbjct: 522 aacacaaagtctatggttaa 541


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,890,137
Number of Sequences: 3902068
Number of extensions: 3890137
Number of successful extensions: 75269
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75102
Number of HSP's gapped (non-prelim): 161
length of query: 580
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 557
effective length of database: 17,143,297,704
effective search space: 9548816821128
effective search space used: 9548816821128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top