Clone Name | bart21a03 |
---|---|
Clone Library Name | barley_pub |
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 337 bits (170), Expect = 2e-89 Identities = 245/270 (90%) Strand = Plus / Plus Query: 308 gtcatgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagcag 367 ||||||||||||| ||||| |||||||||||||||| ||||| ||||||||| ||| || Sbjct: 87876 gtcatgaggtcttactgtttgaggctcttcgcgaggccttgatagaagagatgaaagaag 87935 Query: 368 atccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtga 427 |||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 87936 atccaacggtatgtgtctttggtgaagatgtcggtcactatggaggttcttacaaggtga 87995 Query: 428 ccaagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgaga 487 |||| ||| ||||||| |||||||||||||| || || |||||||| ||||||||||||| Sbjct: 87996 ccaaaggtctggctgagatgtttggagacctacgagtccttgatacccctattgctgaga 88055 Query: 488 attcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaag 547 | |||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||| Sbjct: 88056 actcattcaccggcatgggagttggagcagcgatgaaggggttgaggcctgttgttgaag 88115 Query: 548 gcatgaacatgggcttccttctccttgctt 577 | ||||||||||| |||||||||||||||| Sbjct: 88116 gaatgaacatgggtttccttctccttgctt 88145 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 179 cagcggcgaggagcgtgcgcgtggc 203 ||||||||||||||||||||||||| Sbjct: 86330 cagcggcgaggagcgtgcgcgtggc 86354 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 44 ccgccgccgtcccctccattcctccgccaccgccagccca 83 ||||||||| | ||||||||||||| || |||||| |||| Sbjct: 86012 ccgccgccgccgcctccattcctccaccgccgccacccca 86051
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 337 bits (170), Expect = 2e-89 Identities = 245/270 (90%) Strand = Plus / Plus Query: 308 gtcatgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagcag 367 ||||||||||||| ||||| |||||||||||||||| ||||| ||||||||| ||| || Sbjct: 24709187 gtcatgaggtcttactgtttgaggctcttcgcgaggccttgatagaagagatgaaagaag 24709246 Query: 368 atccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtga 427 |||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 24709247 atccaacggtatgtgtctttggtgaagatgtcggtcactatggaggttcttacaaggtga 24709306 Query: 428 ccaagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgaga 487 |||| ||| ||||||| |||||||||||||| || || |||||||| ||||||||||||| Sbjct: 24709307 ccaaaggtctggctgagatgtttggagacctacgagtccttgatacccctattgctgaga 24709366 Query: 488 attcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaag 547 | |||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||| Sbjct: 24709367 actcattcaccggcatgggagttggagcagcgatgaaggggttgaggcctgttgttgaag 24709426 Query: 548 gcatgaacatgggcttccttctccttgctt 577 | ||||||||||| |||||||||||||||| Sbjct: 24709427 gaatgaacatgggtttccttctccttgctt 24709456 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 179 cagcggcgaggagcgtgcgcgtggc 203 ||||||||||||||||||||||||| Sbjct: 24707641 cagcggcgaggagcgtgcgcgtggc 24707665 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 44 ccgccgccgtcccctccattcctccgccaccgccagccca 83 ||||||||| | ||||||||||||| || |||||| |||| Sbjct: 24707323 ccgccgccgccgcctccattcctccaccgccgccacccca 24707362 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 45 cgccgccg-tcccctccattcctccgcc 71 |||||||| ||||||||||||||||||| Sbjct: 313904 cgccgccgctcccctccattcctccgcc 313931
>dbj|AK103256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124A09, full insert sequence Length = 2662 Score = 337 bits (170), Expect = 2e-89 Identities = 245/270 (90%) Strand = Plus / Plus Query: 308 gtcatgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagcag 367 ||||||||||||| ||||| |||||||||||||||| ||||| ||||||||| ||| || Sbjct: 1454 gtcatgaggtcttactgtttgaggctcttcgcgaggccttgatagaagagatgaaagaag 1513 Query: 368 atccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtga 427 |||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 1514 atccaacggtatgtgtctttggtgaagatgtcggtcactatggaggttcttacaaggtga 1573 Query: 428 ccaagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgaga 487 |||| ||| ||||||| |||||||||||||| || || |||||||| ||||||||||||| Sbjct: 1574 ccaaaggtctggctgagatgtttggagacctacgagtccttgatacccctattgctgaga 1633 Query: 488 attcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaag 547 | |||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||| Sbjct: 1634 actcattcaccggcatgggagttggagcagcgatgaaggggttgaggcctgttgttgaag 1693 Query: 548 gcatgaacatgggcttccttctccttgctt 577 | ||||||||||| |||||||||||||||| Sbjct: 1694 gaatgaacatgggtttccttctccttgctt 1723
>dbj|AK069197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008A03, full insert sequence Length = 1178 Score = 323 bits (163), Expect = 4e-85 Identities = 238/263 (90%) Strand = Plus / Plus Query: 315 ggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagcagatccaac 374 |||||| ||||| |||||||||||||||| ||||| ||||||||| ||| ||||||||| Sbjct: 1 ggtcttactgtttgaggctcttcgcgaggccttgatagaagagatgaaagaagatccaac 60 Query: 375 ggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtgaccaaggg 434 ||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 61 ggtatgtgtctttggtgaagatgtcggtcactatggaggttcttacaaggtgaccaaagg 120 Query: 435 tttggctgatatgtttggagaccttcgggttcttgatacacctattgctgagaattcatt 494 | ||||||| |||||||||||||| || || |||||||| |||||||||||||| ||||| Sbjct: 121 tctggctgagatgtttggagacctacgagtccttgatacccctattgctgagaactcatt 180 Query: 495 cacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaaggcatgaa 554 ||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||| Sbjct: 181 caccggcatgggagttggagcagcgatgaaggggttgaggcctgttgttgaaggaatgaa 240 Query: 555 catgggcttccttctccttgctt 577 |||||| |||||||||||||||| Sbjct: 241 catgggtttccttctccttgctt 263
>dbj|AK101464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040H13, full insert sequence Length = 1406 Score = 276 bits (139), Expect = 8e-71 Identities = 238/271 (87%) Strand = Plus / Plus Query: 307 ggtcatgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagca 366 |||||||||||| || |||| ||||| ||||| || | ||||| ||||||||| ||| | Sbjct: 286 ggtcatgaggtcctgttgtttgaggcccttcgagaagcattgatagaagagatgaaagaa 345 Query: 367 gatccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtg 426 ||||| || || ||||| ||||||||||| || ||||||||||| ||||| || |||||| Sbjct: 346 gatcctacagtttgtgtatttggtgaagatgttggtcactatggaggttcatataaggtg 405 Query: 427 accaagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgag 486 |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 406 accaagggcttggctgagatgtttggagaccttcgggttcttgatacccctattgctgag 465 Query: 487 aattcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaa 546 ||||| ||| | ||||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 466 aattctttcgctggcatgggagttggagcagcaatgaaggggctaaggccaattgttgaa 525 Query: 547 ggcatgaacatgggcttccttctccttgctt 577 |||||||||||||| |||||||||||||||| Sbjct: 526 ggcatgaacatgggtttccttctccttgctt 556
>dbj|AK063753.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A03, full insert sequence Length = 1415 Score = 276 bits (139), Expect = 8e-71 Identities = 238/271 (87%) Strand = Plus / Plus Query: 307 ggtcatgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagca 366 |||||||||||| || |||| ||||| ||||| || | ||||| ||||||||| ||| | Sbjct: 285 ggtcatgaggtcctgttgtttgaggcccttcgagaagcattgatagaagagatgaaagaa 344 Query: 367 gatccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtg 426 ||||| || || ||||| ||||||||||| || ||||||||||| ||||| || |||||| Sbjct: 345 gatcctacagtttgtgtatttggtgaagatgttggtcactatggaggttcatataaggtg 404 Query: 427 accaagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgag 486 |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 405 accaagggcttggctgagatgtttggagaccttcgggttcttgatacccctattgctgag 464 Query: 487 aattcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaa 546 ||||| ||| | ||||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 465 aattctttcgctggcatgggagttggagcagcaatgaaggggctaaggccaattgttgaa 524 Query: 547 ggcatgaacatgggcttccttctccttgctt 577 |||||||||||||| |||||||||||||||| Sbjct: 525 ggcatgaacatgggtttccttctccttgctt 555
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 274 bits (138), Expect = 3e-70 Identities = 237/270 (87%) Strand = Plus / Plus Query: 308 gtcatgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagcag 367 ||||||||||| || |||| ||||| ||||| || | ||||| ||||||||| ||| || Sbjct: 26235839 gtcatgaggtcctgttgtttgaggcccttcgagaagcattgatagaagagatgaaagaag 26235898 Query: 368 atccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtga 427 |||| || || ||||| ||||||||||| || ||||||||||| ||||| || ||||||| Sbjct: 26235899 atcctacagtttgtgtatttggtgaagatgttggtcactatggaggttcatataaggtga 26235958 Query: 428 ccaagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgaga 487 ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 26235959 ccaagggcttggctgagatgtttggagaccttcgggttcttgatacccctattgctgaga 26236018 Query: 488 attcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaag 547 |||| ||| | ||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 26236019 attctttcgctggcatgggagttggagcagcaatgaaggggctaaggccaattgttgaag 26236078 Query: 548 gcatgaacatgggcttccttctccttgctt 577 ||||||||||||| |||||||||||||||| Sbjct: 26236079 gcatgaacatgggtttccttctccttgctt 26236108
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 274 bits (138), Expect = 3e-70 Identities = 237/270 (87%) Strand = Plus / Plus Query: 308 gtcatgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagcag 367 ||||||||||| || |||| ||||| ||||| || | ||||| ||||||||| ||| || Sbjct: 26164015 gtcatgaggtcctgttgtttgaggcccttcgagaagcattgatagaagagatgaaagaag 26164074 Query: 368 atccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtga 427 |||| || || ||||| ||||||||||| || ||||||||||| ||||| || ||||||| Sbjct: 26164075 atcctacagtttgtgtatttggtgaagatgttggtcactatggaggttcatataaggtga 26164134 Query: 428 ccaagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgaga 487 ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 26164135 ccaagggcttggctgagatgtttggagaccttcgggttcttgatacccctattgctgaga 26164194 Query: 488 attcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaag 547 |||| ||| | ||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 26164195 attctttcgctggcatgggagttggagcagcaatgaaggggctaaggccaattgttgaag 26164254 Query: 548 gcatgaacatgggcttccttctccttgctt 577 ||||||||||||| |||||||||||||||| Sbjct: 26164255 gcatgaacatgggtttccttctccttgctt 26164284
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 274 bits (138), Expect = 3e-70 Identities = 237/270 (87%) Strand = Plus / Plus Query: 308 gtcatgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagcag 367 ||||||||||| || |||| ||||| ||||| || | ||||| ||||||||| ||| || Sbjct: 126077 gtcatgaggtcctgttgtttgaggcccttcgagaagcattgatagaagagatgaaagaag 126136 Query: 368 atccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtga 427 |||| || || ||||| ||||||||||| || ||||||||||| ||||| || ||||||| Sbjct: 126137 atcctacagtttgtgtatttggtgaagatgttggtcactatggaggttcatataaggtga 126196 Query: 428 ccaagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgaga 487 ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 126197 ccaagggcttggctgagatgtttggagaccttcgggttcttgatacccctattgctgaga 126256 Query: 488 attcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaag 547 |||| ||| | ||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 126257 attctttcgctggcatgggagttggagcagcaatgaaggggctaaggccaattgttgaag 126316 Query: 548 gcatgaacatgggcttccttctccttgctt 577 ||||||||||||| |||||||||||||||| Sbjct: 126317 gcatgaacatgggtttccttctccttgctt 126346
>gb|AY104779.1| Zea mays PCO116203 mRNA sequence Length = 1131 Score = 246 bits (124), Expect = 7e-62 Identities = 232/268 (86%) Strand = Plus / Plus Query: 310 catgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagcagat 369 ||||||||||||||||| || |||||||| |||| ||||||||||||||| || |||| Sbjct: 365 catgaggtcttgctgtttgaagctcttcgtgaggccttgatggaagagatggaattagat 424 Query: 370 ccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtgacc 429 ||||| |||||||| ||||||||||| || || || || |||||||||||||||||||| Sbjct: 425 ccaacagtgtgtgtgtttggtgaagatgttggccattacggtggttcttacaaggtgaca 484 Query: 430 aagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgagaat 489 || ||||||||||||| |||||| |||||||| ||||| || || |||||||| ||||| Sbjct: 485 aaaggtttggctgatacgtttggtgaccttcgagttctggacacccctattgcggagaac 544 Query: 490 tcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaaggc 549 || || || ||||||||||||||||| || ||||| ||||||||||| || |||||||| Sbjct: 545 tcgtttactggcatgggagttggagcgggaatgaaagggctgaggcccgtcgttgaaggc 604 Query: 550 atgaacatgggcttccttctccttgctt 577 ||||||||||| ||||| |||||||||| Sbjct: 605 atgaacatgggattcctgctccttgctt 632
>gb|AF457974.1| Zea mays clone cho1c.pk002.m4, mRNA sequence Length = 510 Score = 238 bits (120), Expect = 2e-59 Identities = 231/268 (86%) Strand = Plus / Plus Query: 310 catgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagcagat 369 ||||||||||||||||| || |||||||| |||| ||||||||||||||| || |||| Sbjct: 202 catgaggtcttgctgtttgaagctcttcgtgaggccttgatggaagagatggaattagat 261 Query: 370 ccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtgacc 429 ||||| |||||||| ||||||||||| || || || || |||||||||||||||||||| Sbjct: 262 ccaacagtgtgtgtatttggtgaagatgttggccattacggtggttcttacaaggtgaca 321 Query: 430 aagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgagaat 489 || ||||||||||||| ||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 322 aaaggtttggctgatacgtttggagaccttcgagttctggacacccctattgcggagaac 381 Query: 490 tcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaaggc 549 || || || ||||||||||||||||| || ||||| ||| |||| || || |||||||| Sbjct: 382 tcgtttactggcatgggagttggagcgggaatgaaagggttgagacccgtcgttgaaggc 441 Query: 550 atgaacatgggcttccttctccttgctt 577 ||||||||||| ||||| |||||||||| Sbjct: 442 atgaacatgggattcctgctccttgctt 469
>gb|BT016687.1| Zea mays clone Contig520 mRNA sequence Length = 1423 Score = 222 bits (112), Expect = 1e-54 Identities = 229/268 (85%) Strand = Plus / Plus Query: 310 catgaggtcttgctgttcgaggctcttcgcgagggtttgatggaagagatgcaagcagat 369 ||||||||||||||||| || |||||||| |||| ||||||||||||||| || |||| Sbjct: 259 catgaggtcttgctgtttgaagctcttcgtgaggccttgatggaagagatggaattagat 318 Query: 370 ccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtgacc 429 ||||| |||||||| ||||||||||| || || || || |||||||||||||||||||| Sbjct: 319 ccaacagtgtgtgtgtttggtgaagatgttggccattacggtggttcttacaaggtgaca 378 Query: 430 aagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgagaat 489 || || |||||||||| ||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 379 aaagggttggctgatacgtttggagaccttcgagttctggacacccctattgcggagaac 438 Query: 490 tcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaaggc 549 || || || ||||||||||||||||| || ||||| ||| |||| || | |||||||| Sbjct: 439 tcgtttactggcatgggagttggagcgggaatgaaagggttgagacccctcgttgaaggc 498 Query: 550 atgaacatgggcttccttctccttgctt 577 ||||||||||| ||||| |||||||||| Sbjct: 499 atgaacatgggattcctgctccttgctt 526
>gb|BT016727.1| Zea mays clone Contig560 mRNA sequence Length = 1617 Score = 208 bits (105), Expect = 1e-50 Identities = 183/209 (87%) Strand = Plus / Plus Query: 367 gatccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtg 426 |||||||| ||||| ||| | |||||||| || ||||| ||||| ||||| ||||||||| Sbjct: 446 gatccaacagtgtgcgtcatgggtgaagatgttggtcattatggaggttcgtacaaggtg 505 Query: 427 accaagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgag 486 ||||| || |||||||| ||||| ||||| || ||||| |||||||| ||||| || ||| Sbjct: 506 accaaagggttggctgagatgttcggagatctccgggtccttgatacccctatcgccgag 565 Query: 487 aattcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaa 546 || || ||||| ||||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 566 aactccttcactggcatgggagttggagcagcaatgaaggggctgaggcctgttgtggaa 625 Query: 547 ggcatgaacatgggcttccttctccttgc 575 ||||||||||||||||||||||||||||| Sbjct: 626 ggcatgaacatgggcttccttctccttgc 654
>gb|AY108511.1| Zea mays PCO079010 mRNA sequence Length = 1714 Score = 200 bits (101), Expect = 4e-48 Identities = 182/209 (87%) Strand = Plus / Plus Query: 367 gatccaacggtgtgtgtctttggtgaagacgtcggtcactatggtggttcttacaaggtg 426 |||||||| ||||| ||| | |||||||| || ||||| ||||| ||||| ||||||||| Sbjct: 460 gatccaacagtgtgcgtcatgggtgaagatgttggtcattatggaggttcatacaaggtg 519 Query: 427 accaagggtttggctgatatgtttggagaccttcgggttcttgatacacctattgctgag 486 ||||| || |||||||| ||||| ||||| || ||||| |||||||| ||||| || ||| Sbjct: 520 accaaagggttggctgagatgttcggagatctccgggtccttgatacccctatcgccgag 579 Query: 487 aattcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattgaa 546 || || ||||| ||||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 580 aactccttcactggcatgggagttggagcagcaatgaaggggctgaggcctgttgtggaa 639 Query: 547 ggcatgaacatgggcttccttctccttgc 575 |||||||||||||| |||||||||||||| Sbjct: 640 ggcatgaacatgggtttccttctccttgc 668
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 486 gaattcattcacgggcatgggagttggagcaggcatgaaggggctgaggcctgttattga 545 |||||| ||| | ||||||||||||||||||| ||||||||||| ||||| || |||| Sbjct: 1 gaattctttcgctggcatgggagttggagcagcaatgaaggggctaaggccaattgttga 60 Query: 546 aggcatgaacatgggcttccttctccttgctt 577 ||||||||||||||| |||||||||||||||| Sbjct: 61 aggcatgaacatgggtttccttctccttgctt 92
>ref|NM_102751.3| Arabidopsis thaliana PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA); pyruvate dehydrogenase (acetyl-transferring) AT1G30120 (PDH-E1 BETA) mRNA, complete cds Length = 1565 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 412 ggttcttacaaggtgaccaagggtttggctgatatgtttggagaccttcgggttcttgat 471 ||||| |||||||| ||||| || | ||||||| ||||| ||||| ||||||| || Sbjct: 506 ggttcctacaaggtaaccaaaggccttgctgataaatttggtgacctcagggttctcgac 565 Query: 472 acacctattgctgagaattcattcacgggcatgggagttggagcaggcatgaaggggctg 531 || |||||| ||| ||| ||||||| || ||||| ||||||| | ||||| || || Sbjct: 566 actcctatttgtgaaaatgcattcaccggtatgggcattggagctgccatgactggtcta 625 Query: 532 aggcctgttattgaaggcatgaacatgggcttccttctcct 572 || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 626 agacccgttattgaaggtatgaacatgggtttcctcctcct 666
>gb|U80186.1|ATU80186 Arabidopsis thaliana pyruvate dehydrogenase E1 beta subunit mRNA, nuclear gene encoding plastid protein, complete cds Length = 1441 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 412 ggttcttacaaggtgaccaagggtttggctgatatgtttggagaccttcgggttcttgat 471 ||||| |||||||| ||||| || | ||||||| ||||| ||||| ||||||| || Sbjct: 358 ggttcctacaaggtaaccaaaggccttgctgataaatttggtgacctcagggttctcgac 417 Query: 472 acacctattgctgagaattcattcacgggcatgggagttggagcaggcatgaaggggctg 531 || |||||| ||| ||| ||||||| || ||||| ||||||| | ||||| || || Sbjct: 418 actcctatttgtgaaaatgcattcaccggtatgggcattggagctgccatgactggtcta 477 Query: 532 aggcctgttattgaaggcatgaacatgggcttccttctcct 572 || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 478 agacccgttattgaaggtatgaacatgggtttcctcctcct 518
>gb|AY093988.1| Arabidopsis thaliana At1g30120/T2H7_8 mRNA, complete cds Length = 1221 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 412 ggttcttacaaggtgaccaagggtttggctgatatgtttggagaccttcgggttcttgat 471 ||||| |||||||| ||||| || | ||||||| ||||| ||||| ||||||| || Sbjct: 352 ggttcctacaaggtaaccaaaggccttgctgataaatttggtgacctcagggttctcgac 411 Query: 472 acacctattgctgagaattcattcacgggcatgggagttggagcaggcatgaaggggctg 531 || |||||| ||| ||| ||||||| || ||||| ||||||| | ||||| || || Sbjct: 412 actcctatttgtgaaaatgcattcaccggtatgggcattggagctgccatgactggtcta 471 Query: 532 aggcctgttattgaaggcatgaacatgggcttccttctcct 572 || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 472 agacccgttattgaaggtatgaacatgggtttcctcctcct 512
>gb|AF361583.1| Arabidopsis thaliana At1g30120/T2H7_8 mRNA, complete cds Length = 1502 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 412 ggttcttacaaggtgaccaagggtttggctgatatgtttggagaccttcgggttcttgat 471 ||||| |||||||| ||||| || | ||||||| ||||| ||||| ||||||| || Sbjct: 443 ggttcctacaaggtaaccaaaggccttgctgataaatttggtgacctcagggttctcgac 502 Query: 472 acacctattgctgagaattcattcacgggcatgggagttggagcaggcatgaaggggctg 531 || |||||| ||| ||| ||||||| || ||||| ||||||| | ||||| || || Sbjct: 503 actcctatttgtgaaaatgcattcaccggtatgggcattggagctgccatgactggtcta 562 Query: 532 aggcctgttattgaaggcatgaacatgggcttccttctcct 572 || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 563 agacccgttattgaaggtatgaacatgggtttcctcctcct 603
>dbj|AK221898.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-28-A12 Length = 1443 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 412 ggttcttacaaggtgaccaagggtttggctgatatgtttggagaccttcgggttcttgat 471 ||||| |||||||| ||||| || | ||||||| ||||| ||||| ||||||| || Sbjct: 377 ggttcctacaaggtaaccaaaggccttgctgataaatttggtgacctcagggttctcgac 436 Query: 472 acacctattgctgagaattcattcacgggcatgggagttggagcaggcatgaaggggctg 531 || |||||| ||| ||| ||||||| || ||||| ||||||| | ||||| || || Sbjct: 437 actcctatttgtgaaaatgcattcaccggtatgggcattggagctgccatgactggtcta 496 Query: 532 aggcctgttattgaaggcatgaacatgggcttccttctcct 572 || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 497 agacccgttattgaaggtatgaacatgggtttcctcctcct 537
>gb|AC074176.5|AC074176 Arabidopsis thaliana chromosome 1 BAC T2H7 genomic sequence, complete sequence Length = 72058 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 412 ggttcttacaaggtgaccaagggtttggctgatatgtttggagaccttcgggttcttgat 471 ||||| |||||||| ||||| || | ||||||| ||||| ||||| ||||||| || Sbjct: 41796 ggttcctacaaggtaaccaaaggccttgctgataaatttggtgacctcagggttctcgac 41855 Query: 472 acacctattgctgagaattcattcacgggcatgggagttggagcaggcatgaaggggctg 531 || |||||| ||| ||| ||||||| || ||||| ||||||| | ||||| || || Sbjct: 41856 actcctatttgtgaaaatgcattcaccggtatgggcattggagctgccatgactggtcta 41915 Query: 532 aggcctgttattgaaggcatgaacatgggcttccttctcct 572 || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 41916 agacccgttattgaaggtatgaacatgggtttcctcctcct 41956
>gb|AY087733.1| Arabidopsis thaliana clone 38062 mRNA, complete sequence Length = 1562 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 412 ggttcttacaaggtgaccaagggtttggctgatatgtttggagaccttcgggttcttgat 471 ||||| |||||||| ||||| || | ||||||| ||||| ||||| ||||||| || Sbjct: 506 ggttcctacaaggtaaccaaaggccttgctgataaatttggtgacctcagggttctcgac 565 Query: 472 acacctattgctgagaattcattcacgggcatgggagttggagcaggcatgaaggggctg 531 || |||||| ||| ||| ||||||| || ||||| ||||||| | ||||| || || Sbjct: 566 actcctatttgtgaaaatgcattcaccggtatgggcattggagctgccatgactggtcta 625 Query: 532 aggcctgttattgaaggcatgaacatgggcttccttctcct 572 || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 626 agacccgttattgaaggtatgaacatgggtttcctcctcct 666
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccggccccaaa 171 |||| |||||||||||||||||||||||| Sbjct: 682447 ccaccaccaccaccaccgccggccccaaa 682475
>emb|AJ718742.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC21-1-310, cultivar Bright Yellow 2 Length = 235 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 538 gttattgaaggcatgaacatgggcttccttct 569 ||||||||||| |||||||||||||| ||||| Sbjct: 142 gttattgaaggaatgaacatgggctttcttct 173
>gb|AF051249.1|AF051249 Picea mariana pyruvate dehydrogenase E1 beta subunit (Sb68) mRNA, partial cds Length = 1047 Score = 48.1 bits (24), Expect = 0.032 Identities = 75/92 (81%) Strand = Plus / Plus Query: 469 gatacacctattgctgagaattcattcacgggcatgggagttggagcaggcatgaagggg 528 |||||||| || || |||||||| ||||| || ||||| ||||| || | ||||| ||| Sbjct: 52 gatacacccatagccgagaattctttcacagggatgggtgttggggctgccatgacaggg 111 Query: 529 ctgaggcctgttattgaaggcatgaacatggg 560 | ||||||||||| ||||| ||||| ||||| Sbjct: 112 ttaaggcctgttatagaaggaatgaatatggg 143
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 542 ttgaaggcatgaacatgggcttccttctcct 572 |||| |||||||||||||||||||| ||||| Sbjct: 1113829 ttgagggcatgaacatgggcttcctgctcct 1113859
>ref|XM_617989.2| PREDICTED: Bos taurus similar to glutamate receptor, ionotropic, NMDA2B, transcript variant 1 (LOC537804), mRNA Length = 4576 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccggcccca 169 ||||||||||||||||| ||||||||| Sbjct: 3031 ccactaccaccaccaccaccggcccca 3057
>ref|XM_877232.1| PREDICTED: Bos taurus similar to glutamate receptor, ionotropic, NMDA2B, transcript variant 3 (LOC537804), mRNA Length = 4594 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccggcccca 169 ||||||||||||||||| ||||||||| Sbjct: 3049 ccactaccaccaccaccaccggcccca 3075
>ref|XM_877185.1| PREDICTED: Bos taurus similar to glutamate receptor, ionotropic, NMDA2B, transcript variant 2 (LOC537804), mRNA Length = 4579 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccggcccca 169 ||||||||||||||||| ||||||||| Sbjct: 3034 ccactaccaccaccaccaccggcccca 3060
>ref|XM_450298.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1689 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 cgcctcgttcactccgccgccg 52 |||||||||||||||||||||| Sbjct: 58 cgcctcgttcactccgccgccg 79
>ref|XM_960188.1| Neurospora crassa OR74A hypothetical protein (NCU08378.1) partial mRNA Length = 2826 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgccgg 164 |||||||||||||||||||||| Sbjct: 2369 ccactaccaccaccaccgccgg 2348
>ref|XM_329423.1| Neurospora crassa OR74A hypothetical protein (NCU08378.1) partial mRNA Length = 2826 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgccgg 164 |||||||||||||||||||||| Sbjct: 2369 ccactaccaccaccaccgccgg 2348
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 141 cgccactaccaccaccaccgcc 162 |||||||||||||||||||||| Sbjct: 1153147 cgccactaccaccaccaccgcc 1153126
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 cgcctcgttcactccgccgccg 52 |||||||||||||||||||||| Sbjct: 3916046 cgcctcgttcactccgccgccg 3916067 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ttcctccgccaccgccagccc 82 ||||||||||||||||||||| Sbjct: 16205122 ttcctccgccaccgccagccc 16205142
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Minus Query: 388 ggtgaagacgtcggtcactatggtggttcttacaaggtgaccaagg 433 ||||||||||| || |||||||| || |||||||| || ||||||| Sbjct: 124644 ggtgaagacgtaggacactatggcggctcttacaaagtcaccaagg 124599
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0574F11 Length = 159891 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 cgcctcgttcactccgccgccg 52 |||||||||||||||||||||| Sbjct: 47558 cgcctcgttcactccgccgccg 47579
>dbj|AK102536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096I21, full insert sequence Length = 1689 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 cgcctcgttcactccgccgccg 52 |||||||||||||||||||||| Sbjct: 58 cgcctcgttcactccgccgccg 79
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 141 cgccactaccaccaccaccgcc 162 |||||||||||||||||||||| Sbjct: 1186679 cgccactaccaccaccaccgcc 1186658
>dbj|AP000344.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1269D1 Length = 186421 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 gtcccggaggcaggctggtggc 245 |||||||||||||||||||||| Sbjct: 123989 gtcccggaggcaggctggtggc 123968
>ref|NM_188568.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 423 ccactaccaccaccaccgccg 443
>gb|AF016680.2| Caenorhabditis elegans cosmid R12A1, complete sequence Length = 40554 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 gtgtgtgtctttggtgaagac 396 ||||||||||||||||||||| Sbjct: 30902 gtgtgtgtctttggtgaagac 30922
>gb|AC111023.12| Mus musculus chromosome 19, clone RP23-221A9, complete sequence Length = 228107 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 catacacgccactaccaccaccacc 159 ||||||| ||||||||||||||||| Sbjct: 40842 catacacaccactaccaccaccacc 40818
>gb|AC120559.10| Mus musculus chromosome 9, clone RP24-566A4, complete sequence Length = 141300 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 catacacgccactaccaccaccacc 159 ||||||| ||||||||||||||||| Sbjct: 59385 catacacaccactaccaccaccacc 59409
>ref|XM_954800.1| Neurospora crassa OR74A hypothetical protein (NCU02249.1) partial mRNA Length = 2229 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccggccc 167 |||| |||||||||||||||||||| Sbjct: 316 ccaccaccaccaccaccgccggccc 340
>ref|XM_331024.1| Neurospora crassa OR74A hypothetical protein (NCU02249.1) partial mRNA Length = 2229 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccggccc 167 |||| |||||||||||||||||||| Sbjct: 316 ccaccaccaccaccaccgccggccc 340
>ref|XM_705892.1| Candida albicans SC5314 hypothetical protein (CaO19.736), mRNA Length = 1571 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 851 ccactaccaccaccaccgccg 831
>ref|XM_705879.1| Candida albicans SC5314 RNA polymerase I activation mediator protein (CaO19.8355), mRNA Length = 1571 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 851 ccactaccaccaccaccgccg 831
>gb|AC161206.10| Mus musculus chromosome 15, clone RP24-299A13, complete sequence Length = 165791 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 cacgccactaccaccaccacc 159 ||||||||||||||||||||| Sbjct: 119853 cacgccactaccaccaccacc 119873
>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence Length = 209383 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 557 tgggcttccttctccttgctt 577 ||||||||||||||||||||| Sbjct: 195402 tgggcttccttctccttgctt 195382
>gb|AC136022.3| Mus musculus BAC clone RP24-497H18 from chromosome 8, complete sequence Length = 165677 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 107280 ccactaccaccaccaccgccg 107300
>ref|XM_535428.2| PREDICTED: Canis familiaris similar to CG5913-PA (LOC478254), mRNA Length = 1192 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 1113 ccactaccaccaccaccgccg 1093
>gb|AC121999.3| Mus musculus BAC clone RP24-318P16 from chromosome 8, complete sequence Length = 192510 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 83560 ccactaccaccaccaccgccg 83580
>gb|AC124690.4| Mus musculus BAC clone RP24-157B13 from chromosome 1, complete sequence Length = 178992 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 catacacgccactaccaccaccacc 159 ||||||| ||||||||||||||||| Sbjct: 132211 catacacaccactaccaccaccacc 132235
>gb|AC165156.3| Mus musculus BAC clone RP23-298I7 from chromosome 9, complete sequence Length = 198962 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 catacacgccactaccaccaccacc 159 ||||||| ||||||||||||||||| Sbjct: 11282 catacacaccactaccaccaccacc 11258
>gb|AC158905.4| Mus musculus chromosome 19, clone RP23-237A13, complete sequence Length = 171018 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 catacacgccactaccaccaccacc 159 ||||||| ||||||||||||||||| Sbjct: 53891 catacacaccactaccaccaccacc 53915
>emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clone B13D24 Length = 107482 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgccggccc 167 |||| |||||||||||||||||||| Sbjct: 106650 ccaccaccaccaccaccgccggccc 106626
>gb|AC108221.4| Homo sapiens BAC clone RP11-783P19 from 4, complete sequence Length = 59605 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 51921 ccactaccaccaccaccgccg 51901
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 gaaggcatgaacatgggcttc 564 ||||||||||||||||||||| Sbjct: 1475136 gaaggcatgaacatgggcttc 1475156
>ref|XM_681709.1| PREDICTED: Danio rerio similar to MGC83995 protein (LOC558490), mRNA Length = 1736 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 gagggtttgatggaagagatg 360 ||||||||||||||||||||| Sbjct: 789 gagggtttgatggaagagatg 769
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 7008574 ccactaccaccaccaccgccg 7008594
>dbj|AB162925.1| Octopus vulgaris CT gene for cephalotocin, complete cds Length = 3888 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 2698 ccactaccaccaccaccgccg 2718
>gb|AC068274.5| Homo sapiens BAC clone RP11-119B15 from 2, complete sequence Length = 118955 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 catacacgccactaccaccaccacc 159 |||||||| |||||||||||||||| Sbjct: 86288 catacacgtcactaccaccaccacc 86312
>ref|XM_219976.3| PREDICTED: Rattus norvegicus procollagen, type XVII, alpha 1 (predicted) (Col17a1_predicted), mRNA Length = 6514 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 cgccactaccaccaccaccgccggc 165 |||||| |||||||||||||||||| Sbjct: 2689 cgccaccaccaccaccaccgccggc 2665
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 130392 ccactaccaccaccaccgccg 130412
>gb|AF214521.1|AF214521 Sus scrofa AMPK gamma subunit (PRKAG3) gene, complete cds Length = 5888 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 511 ggagcaggcatgaaggggctg 531 ||||||||||||||||||||| Sbjct: 4964 ggagcaggcatgaaggggctg 4944
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ttcctccgccaccgccagccc 82 ||||||||||||||||||||| Sbjct: 21638 ttcctccgccaccgccagccc 21658
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ttcctccgccaccgccagccc 82 ||||||||||||||||||||| Sbjct: 109723 ttcctccgccaccgccagccc 109743
>dbj|AK110431.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-B08, full insert sequence Length = 3324 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 213 ccactaccaccaccaccgccg 233
>gb|AC104225.18| Mus musculus chromosome 15, clone RP23-74H8, complete sequence Length = 246325 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 cacgccactaccaccaccacc 159 ||||||||||||||||||||| Sbjct: 210686 cacgccactaccaccaccacc 210706
>emb|CT009720.16| Mouse DNA sequence from clone RP23-21J17 on chromosome 9, complete sequence Length = 216098 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 catacacgccactaccaccaccacc 159 ||||||| ||||||||||||||||| Sbjct: 153115 catacacaccactaccaccaccacc 153091
>gb|AC134337.3| Mus musculus BAC clone RP23-252I24 from 8, complete sequence Length = 169201 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 557 tgggcttccttctccttgctt 577 ||||||||||||||||||||| Sbjct: 8021 tgggcttccttctccttgctt 8001
>gb|AF001305.1|PCAF001305 Pneumocystis carinii f. sp. carinii protease 1 gene, complete cds Length = 3072 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgccg 163 ||||||||||||||||||||| Sbjct: 2461 ccactaccaccaccaccgccg 2481
>emb|CR848818.10| Zebrafish DNA sequence from clone DKEY-38O19 in linkage group 16, complete sequence Length = 208738 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gagggtttgatggaagagatg 360 ||||||||||||||||||||| Sbjct: 111794 gagggtttgatggaagagatg 111814
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 gaaggcatgaacatgggcttc 564 ||||||||||||||||||||| Sbjct: 145746 gaaggcatgaacatgggcttc 145726
>ref|NM_187633.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 45 cgccgccg-tcccctccattcctccgcc 71 |||||||| ||||||||||||||||||| Sbjct: 543 cgccgccgctcccctccattcctccgcc 516
>ref|NM_001013443.1| Danio rerio eukaryotic translation initiation factor 4, gamma 2b (eif4g2b), mRNA Length = 4030 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ggtttggctgatatgtttgg 452 |||||||||||||||||||| Sbjct: 1285 ggtttggctgatatgtttgg 1304
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgccactaccaccaccaccg 160 |||||||||||||||||||| Sbjct: 65521 cgccactaccaccaccaccg 65540
>gb|AC157938.9| Mus musculus chromosome 5, clone RP23-307P18, complete sequence Length = 188926 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgcc 162 |||||||||||||||||||| Sbjct: 60387 ccactaccaccaccaccgcc 60406
>gb|AC164164.3| Mus musculus BAC clone RP23-180E6 from chromosome 12, complete sequence Length = 245260 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgcc 162 |||||||||||||||||||| Sbjct: 37875 ccactaccaccaccaccgcc 37856
>ref|XM_417758.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 4932703L02 (LOC419611), mRNA Length = 1878 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 gcatcagcggcgaggagcgtgcgc 198 |||||||||||| ||||||||||| Sbjct: 482 gcatcagcggcgcggagcgtgcgc 459
>ref|XM_717453.1| Candida albicans SC5314 putative transcription factor (CaO19_1499), mRNA Length = 3435 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgcc 162 |||||||||||||||||||| Sbjct: 434 ccactaccaccaccaccgcc 453
>ref|XM_717315.1| Candida albicans SC5314 putative transcription factor (CaO19_9075), mRNA Length = 3435 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgcc 162 |||||||||||||||||||| Sbjct: 434 ccactaccaccaccaccgcc 453
>ref|XM_455516.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F09603g predicted mRNA Length = 1065 Score = 40.1 bits (20), Expect = 7.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 386 ttggtgaagacgtcggtcactatggtggttcttacaaggtgaccaagggttt 437 |||||||||| || | ||| ||| |||| |||||||||| ||||||||||| Sbjct: 149 ttggtgaagaagttgctcaatataatggtgcttacaaggttaccaagggttt 200
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 541 attgaaggcatgaacatgggcttccttctcct 572 |||||||| |||||||||||||| || ||||| Sbjct: 1836665 attgaaggtatgaacatgggctttctgctcct 1836634
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 45 cgccgccg-tcccctccattcctccgcc 71 |||||||| ||||||||||||||||||| Sbjct: 313906 cgccgccgctcccctccattcctccgcc 313933
>ref|XM_549336.2| PREDICTED: Canis familiaris similar to PAS domain containing 1 (LOC492216), mRNA Length = 3825 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ctgcattccaccaaaaccca 104 |||||||||||||||||||| Sbjct: 672 ctgcattccaccaaaaccca 653
>gb|AC122461.3| Mus musculus BAC clone RP24-293D14 from chromosome 12, complete sequence Length = 172126 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ccactaccaccaccaccgcc 162 |||||||||||||||||||| Sbjct: 136399 ccactaccaccaccaccgcc 136418
>ref|XM_822961.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.61.0450) partial mRNA Length = 2595 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 tgtgtgtctttggtgaagac 396 |||||||||||||||||||| Sbjct: 1574 tgtgtgtctttggtgaagac 1555
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 45 cgccgccg-tcccctccattcctccgcc 71 |||||||| ||||||||||||||||||| Sbjct: 41434 cgccgccgctcccctccattcctccgcc 41461
>ref|XM_807865.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510847.70) partial mRNA Length = 10161 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 accaccaccaccgccggccc 167 |||||||||||||||||||| Sbjct: 1161 accaccaccaccgccggccc 1142
>emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chromosome 9, complete sequence Length = 117273 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 aacatgggcttccttctcct 572 |||||||||||||||||||| Sbjct: 23494 aacatgggcttccttctcct 23513
>ref|XM_787994.1| PREDICTED: Strongylocentrotus purpuratus similar to heterogeneous nuclear ribonucleoprotein H2 (LOC588303), mRNA Length = 2612 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgcc 162 |||||||||||||||||||| Sbjct: 980 ccactaccaccaccaccgcc 961
>emb|AL162259.12| Human DNA sequence from clone RP3-405J11 on chromosome 1p34.1-34.3, complete sequence Length = 66118 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgcc 162 |||||||||||||||||||| Sbjct: 25382 ccactaccaccaccaccgcc 25363
>emb|AL035419.12|HS1100H13 Human DNA sequence from clone RP5-1100H13 on chromosome 20q11.2 Contains the 3' end of the gene for a novel protein (KIAA1219), a novel gene, a HSPC037 pseudogene, the C20orf95 gene for a novel RhoGAP domain-containing protein and two CpG islands, complete sequence Length = 116792 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 acgccactaccaccaccacc 159 |||||||||||||||||||| Sbjct: 87517 acgccactaccaccaccacc 87498
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 7.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 386 ttggtgaagacgtcggtcactatggtggttcttacaaggtgaccaagggttt 437 |||||||||| || | ||| ||| |||| |||||||||| ||||||||||| Sbjct: 883694 ttggtgaagaagttgctcaatataatggtgcttacaaggttaccaagggttt 883643
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 gaaggcatgaacatgggctt 563 |||||||||||||||||||| Sbjct: 419 gaaggcatgaacatgggctt 438
>emb|AL645571.18| Mouse DNA sequence from clone RP23-39H1 on chromosome 11 Contains a general transcription factor II A, 1 (Gtf2a1) pseudogene, the 3' end of the Pkd1l1 gene for polycystic kidney disease 1 like 1 and a heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3) pseudogene, complete sequence Length = 235198 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgcc 162 |||||||||||||||||||| Sbjct: 229883 ccactaccaccaccaccgcc 229864
>emb|BX470202.7| Zebrafish DNA sequence from clone CH211-283J22 in linkage group 18, complete sequence Length = 133410 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ggtttggctgatatgtttgg 452 |||||||||||||||||||| Sbjct: 64006 ggtttggctgatatgtttgg 63987
>gb|AC116424.1| Homo sapiens 3 BAC RP11-265F19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 tgaggcctgttattgaaggc 549 |||||||||||||||||||| Sbjct: 11067 tgaggcctgttattgaaggc 11048
>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042K08, from chromosome 2, complete sequence Length = 164628 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgccactaccaccaccaccg 160 |||||||||||||||||||| Sbjct: 34201 cgccactaccaccaccaccg 34220
>ref|XM_703359.1| PREDICTED: Danio rerio similar to eIF4G-related protein NAT1B, transcript variant 3 (LOC563050), mRNA Length = 4022 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ggtttggctgatatgtttgg 452 |||||||||||||||||||| Sbjct: 1401 ggtttggctgatatgtttgg 1420
>ref|XM_703358.1| PREDICTED: Danio rerio similar to eIF4G-related protein NAT1B, transcript variant 2 (LOC563050), mRNA Length = 4133 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ggtttggctgatatgtttgg 452 |||||||||||||||||||| Sbjct: 1401 ggtttggctgatatgtttgg 1420
>ref|XM_681462.1| PREDICTED: Danio rerio similar to eIF4G-related protein NAT1B, transcript variant 1 (LOC563050), mRNA Length = 4133 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ggtttggctgatatgtttgg 452 |||||||||||||||||||| Sbjct: 1401 ggtttggctgatatgtttgg 1420
>gb|AC026473.7| Homo sapiens chromosome 16 clone RP11-51O6, complete sequence Length = 170393 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 132 acgcatacacgccactaccaccaccacc 159 |||||||||| |||| |||||||||||| Sbjct: 134872 acgcatacacaccaccaccaccaccacc 134845
>gb|AC148988.5| Mus musculus BAC clone RP23-85B15 from chromosome 7, complete sequence Length = 154177 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 gcgcgggggcgcgtcccggaggca 235 ||||||||||| |||||||||||| Sbjct: 102052 gcgcgggggcgggtcccggaggca 102029
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cgccactaccaccaccaccg 160 |||||||||||||||||||| Sbjct: 7405277 cgccactaccaccaccaccg 7405258
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 42 ctccgccgccgtcccctccattcctccg 69 |||||||||||||| |||||| |||||| Sbjct: 3714285 ctccgccgccgtccactccatgcctccg 3714312
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gaggctcttcgcgagggttt 347 |||||||||||||||||||| Sbjct: 1994047 gaggctcttcgcgagggttt 1994028
>dbj|AB096101.1| Danio rerio mRNA for eIF4G-related protein NAT1B, complete cds Length = 4030 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ggtttggctgatatgtttgg 452 |||||||||||||||||||| Sbjct: 1285 ggtttggctgatatgtttgg 1304
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 42 ctccgccgccgtcccctccattcctccg 69 |||||||||||||| |||||| |||||| Sbjct: 108513 ctccgccgccgtccactccatgcctccg 108540
>emb|BX571951.7| Zebrafish DNA sequence from clone DKEY-5A9 in linkage group 18, complete sequence Length = 157583 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ggtttggctgatatgtttgg 452 |||||||||||||||||||| Sbjct: 63986 ggtttggctgatatgtttgg 63967
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cgccactaccaccaccaccg 160 |||||||||||||||||||| Sbjct: 7475363 cgccactaccaccaccaccg 7475344
>gb|BC109409.1| Danio rerio cDNA clone IMAGE:7282183 Length = 4041 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ggtttggctgatatgtttgg 452 |||||||||||||||||||| Sbjct: 1301 ggtttggctgatatgtttgg 1320
>gb|AC149220.3| Mus musculus BAC clone RP23-412J12 from 7, complete sequence Length = 172077 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgcc 162 |||||||||||||||||||| Sbjct: 75696 ccactaccaccaccaccgcc 75677
>dbj|AP006420.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT15N15, TM0309, complete sequence Length = 89501 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccactaccaccaccaccgc 161 |||||||||||||||||||| Sbjct: 4966 gccactaccaccaccaccgc 4947
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgccactaccaccaccaccg 160 |||||||||||||||||||| Sbjct: 7346 cgccactaccaccaccaccg 7365
>emb|AL591478.19| Mouse DNA sequence from clone RP23-140D14 on chromosome 2, complete sequence Length = 236979 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ccactaccaccaccaccgcc 162 |||||||||||||||||||| Sbjct: 40864 ccactaccaccaccaccgcc 40845 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,437,140 Number of Sequences: 3902068 Number of extensions: 6437140 Number of successful extensions: 129631 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 128423 Number of HSP's gapped (non-prelim): 1210 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)