ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart21a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197271.1| Oryza sativa (japonica cultivar-group) putative... 190 3e-45
2gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 gen... 188 1e-44
3gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 gen... 172 8e-40
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 172 8e-40
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 172 8e-40
6ref|XM_549803.1| Oryza sativa (japonica cultivar-group), mRNA 90 9e-15
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
8dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
9dbj|AK101455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 9e-15
10dbj|AP008219.1| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
11gb|AY103842.1| Zea mays PCO143295 mRNA sequence 68 3e-08
12ref|NM_191079.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
13dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
14dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
15dbj|AK100654.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
16ref|XM_476421.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
18dbj|AK102922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
19dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
20ref|NM_194185.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.47
21gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.47
22gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 44 0.47
23gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 44 0.47
24emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 44 0.47
25emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 44 0.47
26emb|BX640420.1| Bordetella pertussis strain Tohama I, complete g... 44 0.47
27emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.47
28emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 44 0.47
29gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 44 0.47
30gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 44 0.47
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
32dbj|AK101313.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
33gb|BC108399.1| Mus musculus transcription factor-like 5 (basic h... 42 1.8
34gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.8
35ref|XM_366808.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 42 1.8
36gb|AC152001.3| Ornithorhynchus anatinus BAC clone OABb-256A1 fro... 42 1.8
37emb|X52522.1|RGHUPSL Rhodocyclus gelatinosus hupSL genes for upt... 42 1.8
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
39ref|XM_344923.2| PREDICTED: Rattus norvegicus X-ray radiation re... 42 1.8
40gb|AF197897.1|AF197897 Takifugu rubripes Nemo-like kinase (NLK) ... 42 1.8
41gb|AF064564.2|AF064564 Fugu rubripes neurofibromatosis type 1 (N... 42 1.8
42gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
43emb|AL732560.11| Mouse DNA sequence from clone RP24-209P15 on ch... 42 1.8
44ref|NM_188661.1| Oryza sativa (japonica cultivar-group), Ozsa826... 40 7.3
45gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 7.3
46ref|NM_189327.1| Oryza sativa (japonica cultivar-group), predic... 40 7.3
47ref|NM_184932.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.3
48gb|BT017850.1| Zea mays clone EL01N0510G07.c mRNA sequence 40 7.3
49gb|AY540995.1| Achromobacter xylosoxidans subsp. denitrificans s... 40 7.3
50gb|AY196994.1| Streptomyces griseoruber heda cluster, complete s... 40 7.3
51gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 7.3
52gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.3
53gb|AF322256.1| Streptomyces antibioticus simocyclinone biosynthe... 40 7.3
54gb|AF324838.1| Streptomyces antibioticus simocyclinone biosynthe... 40 7.3
55gb|AF029344.2| Burkholderia cepacia putative transcription facto... 40 7.3
56gb|AY231150.1| Myxococcus xanthus TodK (todK) and DotR (dotR) ge... 40 7.3
57gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.3
58emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 o... 40 7.3
59emb|BX070879.1|CNS09QUR Single read from an extremity of a full-... 40 7.3
60gb|CP000088.1| Thermobifida fusca YX, complete genome 40 7.3
61emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.3
62emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 40 7.3
63gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell... 40 7.3
64gb|AC010055.6| Drosophila melanogaster 3L BAC RP98-24H3 (Roswell... 40 7.3
65gb|AE011857.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.3
66gb|AF510072.1| Drosophila melanogaster PARKIN (parkin) gene, com... 40 7.3
67ref|NM_168885.1| Drosophila melanogaster parkin CG10523-RC, tran... 40 7.3
68ref|NM_168884.1| Drosophila melanogaster parkin CG10523-RB, tran... 40 7.3
69gb|AY058754.1| Drosophila melanogaster SD01679 full length cDNA 40 7.3
70gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 40 7.3
71dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
72dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
73gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.3
74gb|AY093423.3| Drosophila melanogaster PARKIN (parkin) mRNA, com... 40 7.3
75dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
76ref|XM_312882.2| Anopheles gambiae str. PEST ENSANGP00000014729 ... 40 7.3
77emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right termin... 40 7.3
78dbj|AK064696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
79dbj|AK060059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
80emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left termina... 40 7.3
81gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74... 40 7.3
82gb|AC174766.1| Gasterosteus aculeatus clone VMRC28-42K14, comple... 40 7.3
83gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, com... 40 7.3
84gb|U09349.1|ABU09349 Azospirillum brasilense Sp7 UDP-glucose 4-e... 40 7.3 
>ref|NM_197271.1| Oryza sativa (japonica cultivar-group) putative ascorbate oxidase
            (OSJNBb0015K05.9), mRNA
          Length = 1722

 Score =  190 bits (96), Expect = 3e-45
 Identities = 234/280 (83%)
 Strand = Plus / Plus

                                                                        
Query: 169  ggaccagttcgacaagacgctgtccatgaaccaggcgcggtctgtccgctggaacctgag 228
            |||||||||||||||| |  | ||||||||||| || || || ||| | |||||||||||
Sbjct: 918  ggaccagttcgacaagtccttctccatgaaccaagctcgctccgtcaggtggaacctgag 977

                                                                        
Query: 229  cgccggcgcggcgcggcccaacccgcagggctccttccggtacgcgtccatcaacgtcac 288
             ||||| |||||| |||| ||||| ||||| || ||| ||||| |||| |||||||| ||
Sbjct: 978  tgccggagcggcgaggccgaacccacagggatcgttcaggtactcgtcgatcaacgtgac 1037

                                                                        
Query: 289  gcaggcgtacctgctgcggagcaccgcacccgtggagattggcgggaagcgcagggcggc 348
            |||||||||||||||||||||||| || || |||  |||   ||||  |||| | ||| |
Sbjct: 1038 gcaggcgtacctgctgcggagcacggcgccggtgacgatcaacgggcggcgccgcgcgac 1097

                                                                        
Query: 349  gctcaacggtctgtccttctccccgccggagacgccgctgcggctcgccgacgcgtatgg 408
            ||| ||||| ||||||||| | ||||| ||||||||||||||||||||||||||||| ||
Sbjct: 1098 gctgaacgggctgtccttcacaccgccagagacgccgctgcggctcgccgacgcgtacgg 1157

                                                    
Query: 409  cgtggagggcgcctacacgctcgacttcccggaccggccg 448
            |||   ||||| |||| |||||||||||||||| ||||||
Sbjct: 1158 cgtcaggggcgtctactcgctcgacttcccggagcggccg 1197



 Score =  107 bits (54), Expect = 4e-20
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                       
Query: 2   tactccttcctcctcaccaccgaccagaacgcctgctccgactactacgtcgtcgccagc 61
           |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 850 tactccttcctcgtcaccaccgaccagaacgcgagctccgactactacgtcgtcgccagc 909

                     
Query: 62  gcccgcatgg 71
           || |||||||
Sbjct: 910 gcgcgcatgg 919



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                              
Query: 489  tcatcaacggcacctaccgggggttcatggagctcatcttccataacaac 538
            ||||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 1229 tcatcaacggcacctaccgcggcttcatggagctcatcttccagaacaac 1278
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>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete
              sequence
          Length = 151991

 Score =  188 bits (95), Expect = 1e-44
 Identities = 174/200 (87%), Gaps = 4/200 (2%)
 Strand = Plus / Minus

                                                                          
Query: 2      tactccttcctcctcaccaccgaccagaacgcctgctccgactactacgtcgtcgccagc 61
              |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 146129 tactccttcctcgtcaccaccgaccagaacgcgagctccgactactacgtcgtcgccagc 146070

                                                                          
Query: 62     gcccgcatggtcaacgagtccctctggcagcgcgtcaccggcgtcgccgtcctccgctac 121
              || |||||||| |||||  || | ||||  |||||| |||||||||||||||||||||||
Sbjct: 146069 gcgcgcatggtgaacgacaccgtgtggcgccgcgtcgccggcgtcgccgtcctccgctac 146010

                                                                          
Query: 122    tccaactcgggcggcgcggcgtccggcccgctcccgaacccgccccaggaccagttcgac 181
              |||||||| || ||||    | |||||||||||||  |||| ||||||||||||||||||
Sbjct: 146009 tccaactccgggggcg----ggccggcccgctccccgaccctccccaggaccagttcgac 145954

                                  
Query: 182    aagacgctgtccatgaacca 201
              ||| |  | |||||||||||
Sbjct: 145953 aagtccttctccatgaacca 145934



 Score =  172 bits (87), Expect = 8e-40
 Identities = 195/231 (84%)
 Strand = Plus / Minus

                                                                          
Query: 218    tggaacctgagcgccggcgcggcgcggcccaacccgcagggctccttccggtacgcgtcc 277
              ||||||||||| ||||| |||||| |||| ||||| ||||| || ||| ||||| |||| 
Sbjct: 145297 tggaacctgagtgccggagcggcgaggccgaacccacagggatcgttcaggtactcgtcg 145238

                                                                          
Query: 278    atcaacgtcacgcaggcgtacctgctgcggagcaccgcacccgtggagattggcgggaag 337
              |||||||| |||||||||||||||||||||||||| || || |||  |||   ||||  |
Sbjct: 145237 atcaacgtgacgcaggcgtacctgctgcggagcacggcgccggtgacgatcaacgggcgg 145178

                                                                          
Query: 338    cgcagggcggcgctcaacggtctgtccttctccccgccggagacgccgctgcggctcgcc 397
              ||| | ||| |||| ||||| ||||||||| | ||||| |||||||||||||||||||||
Sbjct: 145177 cgccgcgcgacgctgaacgggctgtccttcacaccgccagagacgccgctgcggctcgcc 145118

                                                                 
Query: 398    gacgcgtatggcgtggagggcgcctacacgctcgacttcccggaccggccg 448
              |||||||| |||||   ||||| |||| |||||||||||||||| ||||||
Sbjct: 145117 gacgcgtacggcgtcaggggcgtctactcgctcgacttcccggagcggccg 145067



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                
Query: 489    tcatcaacggcacctaccgggggttcatggagctcatcttccataacaac 538
              ||||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 145035 tcatcaacggcacctaccgcggcttcatggagctcatcttccagaacaac 144986
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>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete
             sequence
          Length = 123292

 Score =  172 bits (87), Expect = 8e-40
 Identities = 195/231 (84%)
 Strand = Plus / Minus

                                                                         
Query: 218   tggaacctgagcgccggcgcggcgcggcccaacccgcagggctccttccggtacgcgtcc 277
             ||||||||||| ||||| |||||| |||| ||||| ||||| || ||| ||||| |||| 
Sbjct: 61650 tggaacctgagtgccggagcggcgaggccgaacccacagggatcgttcaggtactcgtcg 61591

                                                                         
Query: 278   atcaacgtcacgcaggcgtacctgctgcggagcaccgcacccgtggagattggcgggaag 337
             |||||||| |||||||||||||||||||||||||| || || |||  |||   ||||  |
Sbjct: 61590 atcaacgtgacgcaggcgtacctgctgcggagcacggcgccggtgacgatcaacgggcgg 61531

                                                                         
Query: 338   cgcagggcggcgctcaacggtctgtccttctccccgccggagacgccgctgcggctcgcc 397
             ||| | ||| |||| ||||| ||||||||| | ||||| |||||||||||||||||||||
Sbjct: 61530 cgccgcgcgacgctgaacgggctgtccttcacaccgccagagacgccgctgcggctcgcc 61471

                                                                
Query: 398   gacgcgtatggcgtggagggcgcctacacgctcgacttcccggaccggccg 448
             |||||||| |||||   ||||| |||| |||||||||||||||| ||||||
Sbjct: 61470 gacgcgtacggcgtcaggggcgtctactcgctcgacttcccggagcggccg 61420



 Score =  170 bits (86), Expect = 3e-39
 Identities = 171/200 (85%), Gaps = 7/200 (3%)
 Strand = Plus / Minus

                                                                         
Query: 2     tactccttcctcctcaccaccgaccagaacgcctgctccgactactacgtcgtcgccagc 61
             |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 62479 tactccttcctcgtcaccaccgaccagaacgcgagctccgactactacgtcgtcgccagc 62420

                                                                         
Query: 62    gcccgcatggtcaacgagtccctctggcagcgcgtcaccggcgtcgccgtcctccgctac 121
             || |||||||| |||||  || | ||||  |||||| |||||||||||||||||||||||
Sbjct: 62419 gcgcgcatggtgaacgacaccgtgtggcgccgcgtcgccggcgtcgccgtcctccgctac 62360

                                                                         
Query: 122   tccaactcgggcggcgcggcgtccggcccgctcccgaacccgccccaggaccagttcgac 181
             |||||||       | ||| | |||||||||||||  |||| ||||||||||||||||||
Sbjct: 62359 tccaact-------cccgggggccggcccgctccccgaccctccccaggaccagttcgac 62307

                                 
Query: 182   aagacgctgtccatgaacca 201
             ||| |  | |||||||||||
Sbjct: 62306 aagtccttctccatgaacca 62287



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                               
Query: 489   tcatcaacggcacctaccgggggttcatggagctcatcttccataacaac 538
             ||||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 61388 tcatcaacggcacctaccgcggcttcatggagctcatcttccagaacaac 61339
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  172 bits (87), Expect = 8e-40
 Identities = 195/231 (84%)
 Strand = Plus / Plus

                                                                            
Query: 218      tggaacctgagcgccggcgcggcgcggcccaacccgcagggctccttccggtacgcgtcc 277
                ||||||||||| ||||| |||||| |||| ||||| ||||| || ||| ||||| |||| 
Sbjct: 18933391 tggaacctgagtgccggagcggcgaggccgaacccacagggatcgttcaggtactcgtcg 18933450

                                                                            
Query: 278      atcaacgtcacgcaggcgtacctgctgcggagcaccgcacccgtggagattggcgggaag 337
                |||||||| |||||||||||||||||||||||||| || || |||  |||   ||||  |
Sbjct: 18933451 atcaacgtgacgcaggcgtacctgctgcggagcacggcgccggtgacgatcaacgggcgg 18933510

                                                                            
Query: 338      cgcagggcggcgctcaacggtctgtccttctccccgccggagacgccgctgcggctcgcc 397
                ||| | ||| |||| ||||| ||||||||| | ||||| |||||||||||||||||||||
Sbjct: 18933511 cgccgcgcgacgctgaacgggctgtccttcacaccgccagagacgccgctgcggctcgcc 18933570

                                                                   
Query: 398      gacgcgtatggcgtggagggcgcctacacgctcgacttcccggaccggccg 448
                |||||||| |||||   ||||| |||| |||||||||||||||| ||||||
Sbjct: 18933571 gacgcgtacggcgtcaggggcgtctactcgctcgacttcccggagcggccg 18933621



 Score =  170 bits (86), Expect = 3e-39
 Identities = 171/200 (85%), Gaps = 7/200 (3%)
 Strand = Plus / Plus

                                                                            
Query: 2        tactccttcctcctcaccaccgaccagaacgcctgctccgactactacgtcgtcgccagc 61
                |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 18932562 tactccttcctcgtcaccaccgaccagaacgcgagctccgactactacgtcgtcgccagc 18932621

                                                                            
Query: 62       gcccgcatggtcaacgagtccctctggcagcgcgtcaccggcgtcgccgtcctccgctac 121
                || |||||||| |||||  || | ||||  |||||| |||||||||||||||||||||||
Sbjct: 18932622 gcgcgcatggtgaacgacaccgtgtggcgccgcgtcgccggcgtcgccgtcctccgctac 18932681

                                                                            
Query: 122      tccaactcgggcggcgcggcgtccggcccgctcccgaacccgccccaggaccagttcgac 181
                |||||||       | ||| | |||||||||||||  |||| ||||||||||||||||||
Sbjct: 18932682 tccaact-------cccgggggccggcccgctccccgaccctccccaggaccagttcgac 18932734

                                    
Query: 182      aagacgctgtccatgaacca 201
                ||| |  | |||||||||||
Sbjct: 18932735 aagtccttctccatgaacca 18932754



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                  
Query: 489      tcatcaacggcacctaccgggggttcatggagctcatcttccataacaac 538
                ||||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 18933653 tcatcaacggcacctaccgcggcttcatggagctcatcttccagaacaac 18933702
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  172 bits (87), Expect = 8e-40
 Identities = 195/231 (84%)
 Strand = Plus / Plus

                                                                            
Query: 218      tggaacctgagcgccggcgcggcgcggcccaacccgcagggctccttccggtacgcgtcc 277
                ||||||||||| ||||| |||||| |||| ||||| ||||| || ||| ||||| |||| 
Sbjct: 18944645 tggaacctgagtgccggagcggcgaggccgaacccacagggatcgttcaggtactcgtcg 18944704

                                                                            
Query: 278      atcaacgtcacgcaggcgtacctgctgcggagcaccgcacccgtggagattggcgggaag 337
                |||||||| |||||||||||||||||||||||||| || || |||  |||   ||||  |
Sbjct: 18944705 atcaacgtgacgcaggcgtacctgctgcggagcacggcgccggtgacgatcaacgggcgg 18944764

                                                                            
Query: 338      cgcagggcggcgctcaacggtctgtccttctccccgccggagacgccgctgcggctcgcc 397
                ||| | ||| |||| ||||| ||||||||| | ||||| |||||||||||||||||||||
Sbjct: 18944765 cgccgcgcgacgctgaacgggctgtccttcacaccgccagagacgccgctgcggctcgcc 18944824

                                                                   
Query: 398      gacgcgtatggcgtggagggcgcctacacgctcgacttcccggaccggccg 448
                |||||||| |||||   ||||| |||| |||||||||||||||| ||||||
Sbjct: 18944825 gacgcgtacggcgtcaggggcgtctactcgctcgacttcccggagcggccg 18944875



 Score =  170 bits (86), Expect = 3e-39
 Identities = 171/200 (85%), Gaps = 7/200 (3%)
 Strand = Plus / Plus

                                                                            
Query: 2        tactccttcctcctcaccaccgaccagaacgcctgctccgactactacgtcgtcgccagc 61
                |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 18943816 tactccttcctcgtcaccaccgaccagaacgcgagctccgactactacgtcgtcgccagc 18943875

                                                                            
Query: 62       gcccgcatggtcaacgagtccctctggcagcgcgtcaccggcgtcgccgtcctccgctac 121
                || |||||||| |||||  || | ||||  |||||| |||||||||||||||||||||||
Sbjct: 18943876 gcgcgcatggtgaacgacaccgtgtggcgccgcgtcgccggcgtcgccgtcctccgctac 18943935

                                                                            
Query: 122      tccaactcgggcggcgcggcgtccggcccgctcccgaacccgccccaggaccagttcgac 181
                |||||||       | ||| | |||||||||||||  |||| ||||||||||||||||||
Sbjct: 18943936 tccaact-------cccgggggccggcccgctccccgaccctccccaggaccagttcgac 18943988

                                    
Query: 182      aagacgctgtccatgaacca 201
                ||| |  | |||||||||||
Sbjct: 18943989 aagtccttctccatgaacca 18944008



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                  
Query: 489      tcatcaacggcacctaccgggggttcatggagctcatcttccataacaac 538
                ||||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 18944907 tcatcaacggcacctaccgcggcttcatggagctcatcttccagaacaac 18944956
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>ref|XM_549803.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2162

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 2   tactccttcctcctcaccaccgaccagaacgcctgctccgactactacgtcgtcgccagc 61
           ||||||||||| |||||||  ||||||||||||| | |||||||||||||||||||||||
Sbjct: 886 tactccttccttctcaccatggaccagaacgcctccaccgactactacgtcgtcgccagc 945

                
Query: 62  gcccg 66
           |||||
Sbjct: 946 gcccg 950



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                              
Query: 96   tcaccggcgtcgccgtcctccgctactccaactc 129
            |||||||||||||| |||||| ||||||||||||
Sbjct: 974  tcaccggcgtcgccatcctccactactccaactc 1007
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             complete sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 2     tactccttcctcctcaccaccgaccagaacgcctgctccgactactacgtcgtcgccagc 61
             ||||||||||| |||||||  ||||||||||||| | |||||||||||||||||||||||
Sbjct: 12605 tactccttccttctcaccatggaccagaacgcctccaccgactactacgtcgtcgccagc 12664

                  
Query: 62    gcccg 66
             |||||
Sbjct: 12665 gcccg 12669



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 213      tccgctggaacctgagcgccggcgcggcgcggcccaacccgcagggctcct 263
                |||||||||||||||  ||  ||||||||||||||||||||||||| ||||
Sbjct: 34741382 tccgctggaacctgacggcgagcgcggcgcggcccaacccgcaggggtcct 34741432



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 96    tcaccggcgtcgccgtcctccgctactccaactc 129
             |||||||||||||| |||||| ||||||||||||
Sbjct: 12693 tcaccggcgtcgccatcctccactactccaactc 12726



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 442      ccggccggacccggacgccgccgcgcgc 469
                ||||||||| |||| |||||||||||||
Sbjct: 42186775 ccggccggagccggccgccgccgcgcgc 42186802



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 451     cccggacgccgccgcgcgcc 470
               ||||||||||||||||||||
Sbjct: 7481629 cccggacgccgccgcgcgcc 7481610
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>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0672D08
          Length = 173729

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 2     tactccttcctcctcaccaccgaccagaacgcctgctccgactactacgtcgtcgccagc 61
             ||||||||||| |||||||  ||||||||||||| | |||||||||||||||||||||||
Sbjct: 10407 tactccttccttctcaccatggaccagaacgcctccaccgactactacgtcgtcgccagc 10466

                  
Query: 62    gcccg 66
             |||||
Sbjct: 10467 gcccg 10471



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 96    tcaccggcgtcgccgtcctccgctactccaactc 129
             |||||||||||||| |||||| ||||||||||||
Sbjct: 10495 tcaccggcgtcgccatcctccactactccaactc 10528
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>dbj|AK101455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040A20, full
           insert sequence
          Length = 2162

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 2   tactccttcctcctcaccaccgaccagaacgcctgctccgactactacgtcgtcgccagc 61
           ||||||||||| |||||||  ||||||||||||| | |||||||||||||||||||||||
Sbjct: 886 tactccttccttctcaccatggaccagaacgcctccaccgactactacgtcgtcgccagc 945

                
Query: 62  gcccg 66
           |||||
Sbjct: 946 gcccg 950



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                              
Query: 96   tcaccggcgtcgccgtcctccgctactccaactc 129
            |||||||||||||| |||||| ||||||||||||
Sbjct: 974  tcaccggcgtcgccatcctccactactccaactc 1007
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>dbj|AP008219.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             fosmid clone:OSJNOa264G09
          Length = 31687

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 2     tactccttcctcctcaccaccgaccagaacgcctgctccgactactacgtcgtcgccagc 61
             ||||||||||| |||||||  ||||||||||||| | |||||||||||||||||||||||
Sbjct: 12605 tactccttccttctcaccatggaccagaacgcctccaccgactactacgtcgtcgccagc 12664

                  
Query: 62    gcccg 66
             |||||
Sbjct: 12665 gcccg 12669



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 96    tcaccggcgtcgccgtcctccgctactccaactc 129
             |||||||||||||| |||||| ||||||||||||
Sbjct: 12693 tcaccggcgtcgccatcctccactactccaactc 12726
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>gb|AY103842.1| Zea mays PCO143295 mRNA sequence
          Length = 1337

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 190 gtccatgaaccaggcgcggtctgtccgctggaacctgagcgccggcgcggcgcggcccaa 249
           |||||| ||||||||  ||||  |||||||||||||||  ||| |||| ||||| |||||
Sbjct: 227 gtccatcaaccaggccaggtcgttccgctggaacctgacggccagcgccgcgcgccccaa 286

                         
Query: 250 cccgcagggctcct 263
           ||||||||||||||
Sbjct: 287 cccgcagggctcct 300
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>ref|NM_191079.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1662

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 213  tccgctggaacctgagcgccggcgcggcgcggcccaacccgcagggctcct 263
            |||||||||||||||  ||  ||||||||||||||||||||||||| ||||
Sbjct: 977  tccgctggaacctgacggcgagcgcggcgcggcccaacccgcaggggtcct 1027
to top
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1148D12
          Length = 132060

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 213   tccgctggaacctgagcgccggcgcggcgcggcccaacccgcagggctcct 263
             |||||||||||||||  ||  ||||||||||||||||||||||||| ||||
Sbjct: 56622 tccgctggaacctgacggcgagcgcggcgcggcccaacccgcaggggtcct 56672
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>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0454H12
          Length = 161004

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 213 tccgctggaacctgagcgccggcgcggcgcggcccaacccgcagggctcct 263
           |||||||||||||||  ||  ||||||||||||||||||||||||| ||||
Sbjct: 554 tccgctggaacctgacggcgagcgcggcgcggcccaacccgcaggggtcct 604
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>dbj|AK100654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111E13, full
            insert sequence
          Length = 2451

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 213  tccgctggaacctgagcgccggcgcggcgcggcccaacccgcagggctcct 263
            |||||||||||||||  ||  ||||||||||||||||||||||||| ||||
Sbjct: 1161 tccgctggaacctgacggcgagcgcggcgcggcccaacccgcaggggtcct 1211
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>ref|XM_476421.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1968

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                        
Query: 194  atgaaccaggcgcggtctgtccgctggaacctgagcgccggcgcggcgcggcccaacccg 253
            |||||||||||| ||||  |||| ||||||||||  ||  |||||||| |||||||||||
Sbjct: 992  atgaaccaggcgaggtcgttccggtggaacctgacggcgagcgcggcgaggcccaacccg 1051

                 
Query: 254  caggg 258
            |||||
Sbjct: 1052 caggg 1056
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                           
Query: 194     atgaaccaggcgcggtctgtccgctggaacctgagcgccggcgcggcgcggcccaacccg 253
               |||||||||||| ||||  |||| ||||||||||  ||  |||||||| |||||||||||
Sbjct: 1055583 atgaaccaggcgaggtcgttccggtggaacctgacggcgagcgcggcgaggcccaacccg 1055642

                    
Query: 254     caggg 258
               |||||
Sbjct: 1055643 caggg 1055647



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                             
Query: 213     tccgctggaacctgagcgccggcgcggcgcggcccaacccgcaggg 258
               |||| ||||||||||  ||  |||||||| ||||||||||||||||
Sbjct: 1063214 tccggtggaacctgacggcgagcgcggcgaggcccaacccgcaggg 1063259
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>dbj|AK102922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114C13, full
            insert sequence
          Length = 1967

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                        
Query: 194  atgaaccaggcgcggtctgtccgctggaacctgagcgccggcgcggcgcggcccaacccg 253
            |||||||||||| ||||  |||| ||||||||||  ||  |||||||| |||||||||||
Sbjct: 992  atgaaccaggcgaggtcgttccggtggaacctgacggcgagcgcggcgaggcccaacccg 1051

                 
Query: 254  caggg 258
            |||||
Sbjct: 1052 caggg 1056
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>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0022B05
          Length = 151317

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 194   atgaaccaggcgcggtctgtccgctggaacctgagcgccggcgcggcgcggcccaacccg 253
             |||||||||||| ||||  |||| ||||||||||  ||  |||||||| |||||||||||
Sbjct: 53171 atgaaccaggcgaggtcgttccggtggaacctgacggcgagcgcggcgaggcccaacccg 53230

                  
Query: 254   caggg 258
             |||||
Sbjct: 53231 caggg 53235



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 213   tccgctggaacctgagcgccggcgcggcgcggcccaacccgcaggg 258
             |||| ||||||||||  ||  |||||||| ||||||||||||||||
Sbjct: 60802 tccggtggaacctgacggcgagcgcggcgaggcccaacccgcaggg 60847
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>ref|NM_194185.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 255

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 213 tccgctggaacctgagcgccggcgcggcgcggcccaacccgcaggg 258
           |||| ||||||||||  ||  |||||||| ||||||||||||||||
Sbjct: 8   tccggtggaacctgacggcgagcgcggcgaggcccaacccgcaggg 53
to top
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06,
              complete sequence
          Length = 144457

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 217    ctggaacctgagcgccggcgcggcgc 242
              |||||| |||||||||||||||||||
Sbjct: 102940 ctggaagctgagcgccggcgcggcgc 102915
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 430     cgacttcccggaccggccggac 451
               ||||||||||||||||||||||
Sbjct: 1324424 cgacttcccggaccggccggac 1324403
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 449     gacccggacgccgccgcgcgcc 470
               ||||||||||||||||||||||
Sbjct: 1510658 gacccggacgccgccgcgcgcc 1510679
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>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 430    cgacttcccggaccggccggac 451
              ||||||||||||||||||||||
Sbjct: 291150 cgacttcccggaccggccggac 291129
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>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 223   cctgagcgccggcgcggcgcgg 244
             ||||||||||||||||||||||
Sbjct: 96429 cctgagcgccggcgcggcgcgg 96408
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>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12
          Length = 348134

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 223    cctgagcgccggcgcggcgcgg 244
              ||||||||||||||||||||||
Sbjct: 274687 cctgagcgccggcgcggcgcgg 274666
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 449     gacccggacgccgccgcgcgcc 470
               ||||||||||||||||||||||
Sbjct: 2845377 gacccggacgccgccgcgcgcc 2845398
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>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             5/14
          Length = 299450

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 430   cgacttcccggaccggccggac 451
             ||||||||||||||||||||||
Sbjct: 11587 cgacttcccggaccggccggac 11566
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>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 226    gagcgccggcgcggcgcggccc 247
              ||||||||||||||||||||||
Sbjct: 176315 gagcgccggcgcggcgcggccc 176294
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 449    gacccggacgccgccgcgcgcc 470
              ||||||||||||||||||||||
Sbjct: 392867 gacccggacgccgccgcgcgcc 392846
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 217     ctggaacctgagcgccggcgcggcgc 242
               |||||| |||||||||||||||||||
Sbjct: 8770498 ctggaagctgagcgccggcgcggcgc 8770473
to top
>dbj|AK101313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034A12, full
           insert sequence
          Length = 1250

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 217 ctggaacctgagcgccggcgcggcgc 242
           |||||| |||||||||||||||||||
Sbjct: 750 ctggaagctgagcgccggcgcggcgc 775
to top
>gb|BC108399.1| Mus musculus transcription factor-like 5 (basic helix-loop-helix),
           mRNA (cDNA clone MGC:118431 IMAGE:6394526), complete cds
          Length = 2237

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 230 gccggcgcggcgcggcccaac 250
           |||||||||||||||||||||
Sbjct: 102 gccggcgcggcgcggcccaac 82
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 87     ggcagcgcgtcaccggcgtcg 107
              |||||||||||||||||||||
Sbjct: 423654 ggcagcgcgtcaccggcgtcg 423634
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>ref|XM_366808.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02884.4) partial mRNA
          Length = 1050

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 487 cgtcatcaacggcacctaccg 507
           |||||||||||||||||||||
Sbjct: 270 cgtcatcaacggcacctaccg 290
to top
>gb|AC152001.3| Ornithorhynchus anatinus BAC clone OABb-256A1 from chromosome unknown,
              complete sequence
          Length = 162942

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    gggcggcgcggcgtccggccc 150
              |||||||||||||||||||||
Sbjct: 115679 gggcggcgcggcgtccggccc 115699
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>emb|X52522.1|RGHUPSL Rhodocyclus gelatinosus hupSL genes for uptake-hydrogenase subunits
          Length = 3991

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 449  gacccggacgccgccgcgcgc 469
            |||||||||||||||||||||
Sbjct: 1771 gacccggacgccgccgcgcgc 1791
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 457      cgccgccgcgcgccatcgggtcgcg 481
                |||||||||||||||||| ||||||
Sbjct: 11889217 cgccgccgcgcgccatcgtgtcgcg 11889241
to top
>ref|XM_344923.2| PREDICTED: Rattus norvegicus X-ray radiation resistance associated
           1 (predicted) (Xrra1_predicted), mRNA
          Length = 1416

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 518 gagctcatcttccataacaac 538
           |||||||||||||||||||||
Sbjct: 253 gagctcatcttccataacaac 273
to top
>gb|AF197897.1|AF197897 Takifugu rubripes Nemo-like kinase (NLK) and FN5 protein (FN5) genes,
             complete cds; and neurofibromatosis type 1 neurofibromin
             (NF1) gene, partial cds
          Length = 16370

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 436   cccggaccggccggacccgga 456
             |||||||||||||||||||||
Sbjct: 14007 cccggaccggccggacccgga 14027
to top
>gb|AF064564.2|AF064564 Fugu rubripes neurofibromatosis type 1 (NF1), A-kinase anchor protein
            (AKAP84), BAW protein (BAW), and WSB1 protein (WSB1)
            genes, complete cds
          Length = 49254

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 436  cccggaccggccggacccgga 456
            |||||||||||||||||||||
Sbjct: 1906 cccggaccggccggacccgga 1926
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 457      cgccgccgcgcgccatcgggtcgcg 481
                |||||||||||||||||| ||||||
Sbjct: 11888887 cgccgccgcgcgccatcgtgtcgcg 11888911
to top
>emb|AL732560.11| Mouse DNA sequence from clone RP24-209P15 on chromosome 2, complete
            sequence
          Length = 104663

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 230  gccggcgcggcgcggcccaac 250
            |||||||||||||||||||||
Sbjct: 4889 gccggcgcggcgcggcccaac 4909
to top
>ref|NM_188661.1| Oryza sativa (japonica cultivar-group), Ozsa8264 predicted mRNA
          Length = 2952

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 cccggacgccgccgcgcgcc 470
           ||||||||||||||||||||
Sbjct: 60  cccggacgccgccgcgcgcc 79
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    gcagcgcgtcaccggcgtcg 107
             ||||||||||||||||||||
Sbjct: 13971 gcagcgcgtcaccggcgtcg 13952
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>ref|NM_189327.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2355

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 442 ccggccggacccggacgccgccgcgcgc 469
           ||||||||| |||| |||||||||||||
Sbjct: 900 ccggccggagccggccgccgccgcgcgc 927
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>ref|NM_184932.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 958

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 449 gacccggacgccgccgcgcg 468
           ||||||||||||||||||||
Sbjct: 365 gacccggacgccgccgcgcg 384
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>gb|BT017850.1| Zea mays clone EL01N0510G07.c mRNA sequence
          Length = 1007

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 442 ccggccggacccggacgccg 461
           ||||||||||||||||||||
Sbjct: 311 ccggccggacccggacgccg 330
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>gb|AY540995.1| Achromobacter xylosoxidans subsp. denitrificans strain EST4002 plasmid
             pEST4011, complete sequence
          Length = 76958

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   gcgcggcgtccggcccgctc 154
             ||||||||||||||||||||
Sbjct: 49482 gcgcggcgtccggcccgctc 49501
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>gb|AY196994.1| Streptomyces griseoruber heda cluster, complete sequence
          Length = 45603

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   gcgccggcgcggcgcggccc 247
             ||||||||||||||||||||
Sbjct: 25410 gcgccggcgcggcgcggccc 25429
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     gagcgccggcgcggcgcggc 245
               ||||||||||||||||||||
Sbjct: 1404595 gagcgccggcgcggcgcggc 1404614
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 449      gacccggacgccgccgcgcg 468
                ||||||||||||||||||||
Sbjct: 14382373 gacccggacgccgccgcgcg 14382392
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>gb|AF322256.1| Streptomyces antibioticus simocyclinone biosynthetic gene cluster,
            partial sequence
          Length = 39428

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   ctggcagcgcgtcaccggcg 104
            ||||||||||||||||||||
Sbjct: 4191 ctggcagcgcgtcaccggcg 4210
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>gb|AF324838.1| Streptomyces antibioticus simocyclinone biosynthetic gene cluster,
            partial sequence
          Length = 34869

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   ctggcagcgcgtcaccggcg 104
            ||||||||||||||||||||
Sbjct: 8473 ctggcagcgcgtcaccggcg 8492
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>gb|AF029344.2| Burkholderia cepacia putative transcription factor, malonate
            decarboxylase epsilon-subunit (mdcH), MdcB (mdcB), MdcG
            (mdcG), malonate decarboxylase gamma-subunit (mdcE),
            malonate decarboxylase beta-subunit (mdcD), malonate
            decarboxylase delta-subunit (mdcC), malonate
            decarboxylase alpha-subunit (mdcA), proline
            dehydrogenase/pyrroline-5-carboxylate dehydrogenase
            bifunctional protein (putA), leucine-responsive
            regulatory protein (lrp), chloride-channel protein,
            chloromuconate cycloisomerase (tfdD), indole acetamide
            hydrolase (iaaH), LysR-type transcription factor (tfdR),
            chlorocatechol 1,2-dioxygenase (tfdC), dienelactone
            hydrolase (tfdE), 2,4-dichlorophenol hydroxylase (tfdB),
            putative transport protein (tfdK),
            2,4-D/alpha-ketoglutarate dioxygenase (tfdA),
            maleylacetate reductase (tfdF), and putative transposase
            genes, complete cds; and unknown genes
          Length = 36642

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  gcgcggcgtccggcccgctc 154
            ||||||||||||||||||||
Sbjct: 5662 gcgcggcgtccggcccgctc 5643
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>gb|AY231150.1| Myxococcus xanthus TodK (todK) and DotR (dotR) genes, complete cds
          Length = 3248

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 370  cccgccggagacgccgctgcggct 393
            |||||||||||||||| |||||||
Sbjct: 1748 cccgccggagacgccggtgcggct 1771
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 458     gccgccgcgcgccatcgggt 477
               ||||||||||||||||||||
Sbjct: 4093752 gccgccgcgcgccatcgggt 4093771
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>emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 on chromosome 1p34.1-35
             Contains the OPRD1 gene for opioid receptor delta 1, two
             novel genes, the 5' end of the  EPB41 gene for erythrocyte
             membrane protein band 4.1 (elliptocytosis 1, RH-linked)
             and a CpG island, complete sequence
          Length = 148540

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   ggaccggccggacccggacg 458
             ||||||||||||||||||||
Sbjct: 71097 ggaccggccggacccggacg 71116
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>emb|BX070879.1|CNS09QUR Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC8AG10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1021

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ggcgcggtctgtccgctgga 221
           ||||||||||||||||||||
Sbjct: 509 ggcgcggtctgtccgctgga 528
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 495     acggcacctaccgggggttc 514
               ||||||||||||||||||||
Sbjct: 2311395 acggcacctaccgggggttc 2311376
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>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    agcgccggcgcggcgcggcc 246
              ||||||||||||||||||||
Sbjct: 250482 agcgccggcgcggcgcggcc 250463
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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    agcgccggcgcggcgcggcc 246
              ||||||||||||||||||||
Sbjct: 248574 agcgccggcgcggcgcggcc 248555
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>gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 182960

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    tccttctccccgccggagac 381
              ||||||||||||||||||||
Sbjct: 158638 tccttctccccgccggagac 158619
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>gb|AC010055.6| Drosophila melanogaster 3L BAC RP98-24H3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163098

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   tccttctccccgccggagac 381
             ||||||||||||||||||||
Sbjct: 42083 tccttctccccgccggagac 42064
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>gb|AE011857.1| Xanthomonas axonopodis pv. citri str. 306,  section 235 of 469 of the
            complete genome
          Length = 12995

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   acgtcgtcgccagcgcccgc 67
            ||||||||||||||||||||
Sbjct: 6822 acgtcgtcgccagcgcccgc 6841
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>gb|AF510072.1| Drosophila melanogaster PARKIN (parkin) gene, complete cds
          Length = 1888

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 tccttctccccgccggagac 381
           ||||||||||||||||||||
Sbjct: 867 tccttctccccgccggagac 848
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>ref|NM_168885.1| Drosophila melanogaster parkin CG10523-RC, transcript variant C
           (park), mRNA
          Length = 1609

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 tccttctccccgccggagac 381
           ||||||||||||||||||||
Sbjct: 787 tccttctccccgccggagac 768
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>ref|NM_168884.1| Drosophila melanogaster parkin CG10523-RB, transcript variant B
           (park), mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 tccttctccccgccggagac 381
           ||||||||||||||||||||
Sbjct: 813 tccttctccccgccggagac 794
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>gb|AY058754.1| Drosophila melanogaster SD01679 full length cDNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 tccttctccccgccggagac 381
           ||||||||||||||||||||
Sbjct: 734 tccttctccccgccggagac 715
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>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
              sequence
          Length = 158714

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    gacccggacgccgccgcgcg 468
              ||||||||||||||||||||
Sbjct: 131602 gacccggacgccgccgcgcg 131621
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 449      gacccggacgccgccgcgcg 468
                ||||||||||||||||||||
Sbjct: 14377348 gacccggacgccgccgcgcg 14377367
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>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1294_F06
          Length = 121088

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 442   ccggccggacccggacgccgccgcgcgc 469
             ||||||||| |||| |||||||||||||
Sbjct: 59973 ccggccggagccggccgccgccgcgcgc 60000
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 381     cgccgctgcggctcgccgacgcgt 404
               |||||| |||||||||||||||||
Sbjct: 3806867 cgccgccgcggctcgccgacgcgt 3806844



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 132     gcggcgcggcgtccggcccg 151
               ||||||||||||||||||||
Sbjct: 3168502 gcggcgcggcgtccggcccg 3168483
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>gb|AY093423.3| Drosophila melanogaster PARKIN (parkin) mRNA, complete cds
          Length = 1478

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 tccttctccccgccggagac 381
           ||||||||||||||||||||
Sbjct: 734 tccttctccccgccggagac 715
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>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0708G02
          Length = 168976

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   cccggacgccgccgcgcgcc 470
             ||||||||||||||||||||
Sbjct: 30421 cccggacgccgccgcgcgcc 30402
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>ref|XM_312882.2| Anopheles gambiae str. PEST ENSANGP00000014729
           (ENSANGG00000012240), partial mRNA
          Length = 1521

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ggcgcggtctgtccgctgga 221
           ||||||||||||||||||||
Sbjct: 847 ggcgcggtctgtccgctgga 866
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>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     ctacgtcgtcgccagcgccc 65
              ||||||||||||||||||||
Sbjct: 154540 ctacgtcgtcgccagcgccc 154521
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>dbj|AK064696.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F11, full
           insert sequence
          Length = 1754

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 cccggacgccgccgcgcgcc 470
           ||||||||||||||||||||
Sbjct: 186 cccggacgccgccgcgcgcc 205
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>dbj|AK060059.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F04, full
           insert sequence
          Length = 950

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 449 gacccggacgccgccgcgcg 468
           ||||||||||||||||||||
Sbjct: 384 gacccggacgccgccgcgcg 403
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>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     ctacgtcgtcgccagcgccc 65
              ||||||||||||||||||||
Sbjct: 154540 ctacgtcgtcgccagcgccc 154521
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>gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74 of 83 of the complete
              sequence
          Length = 313157

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    tccttctccccgccggagac 381
              ||||||||||||||||||||
Sbjct: 243294 tccttctccccgccggagac 243313
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>gb|AC174766.1| Gasterosteus aculeatus clone VMRC28-42K14, complete sequence
          Length = 134249

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   acgcaggcgtacctgctgcg 306
             ||||||||||||||||||||
Sbjct: 48194 acgcaggcgtacctgctgcg 48175
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>gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, complete sequence
          Length = 99448

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   gcgcggcgtccggcccgctc 154
             ||||||||||||||||||||
Sbjct: 66649 gcgcggcgtccggcccgctc 66630
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>gb|U09349.1|ABU09349 Azospirillum brasilense Sp7 UDP-glucose 4-epimerase (exoB2) gene,
           complete cds
          Length = 1201

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 229 cgccggcgcggcgcggcccaaccc 252
           ||||||||||||||||||| ||||
Sbjct: 920 cgccggcgcggcgcggcccgaccc 897


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,986,589
Number of Sequences: 3902068
Number of extensions: 2986589
Number of successful extensions: 74368
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70549
Number of HSP's gapped (non-prelim): 3818
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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