Clone Name | bart20h06 |
---|---|
Clone Library Name | barley_pub |
>NFI_METKA (Q8X260) Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease)| (Deoxyribonuclease V) (DNase V) Length = 229 Score = 31.6 bits (70), Expect = 1.9 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -1 Query: 607 PQRAQTENGALHVLVVGGWVVRRDVEQRVVLEVLPHRCTGASCIVTTLRIIR 452 P R +H V G++VR D E R V+ HRC + TLR++R Sbjct: 145 PSRIGDTTPLVHRGEVVGYLVRTDAEARPVVVSPGHRCNLEDAVRWTLRLVR 196
>GPR56_GORGO (Q50DM6) G-protein coupled receptor 56 precursor| Length = 687 Score = 30.8 bits (68), Expect = 3.2 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Frame = +2 Query: 167 YWNRTAGADHFFVVPHDF--------GACFHYQEEKAIERGILPLLRRATLVQTFGQKDH 322 YWNR AG H HDF CF +QEE + PLL AT V ++ + Sbjct: 93 YWNRHAGRLHLLYGKHDFLLSDKASSLLCFQHQEESLAQGP--PLL--ATSVTSWWSPQN 148 Query: 323 VCL-KEGSINIPPYAPP 370 V L S ++PP Sbjct: 149 VSLPSAASFTFSFHSPP 165
>CPXU_RHISN (P55540) Cytochrome P450 BJ-4 homolog (EC 1.14.14.-)| Length = 447 Score = 30.0 bits (66), Expect = 5.5 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Frame = +2 Query: 119 PRIMRSAVQFISSHWPYWNRTAGADHFF--VVPHDFGACFHYQEEKAIERGILPLLRRAT 292 PR++R A + + SH +W A H V PH F H A+ I P L T Sbjct: 39 PRLLRRAERTLGSH--FWLDFGPAGHLMTCVDPHAFALLRHKDVSSALIEEIAPELLGGT 96 Query: 293 LVQTFG 310 LV G Sbjct: 97 LVAQDG 102
>NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 precursor (Notch| 4) (hNotch4) [Contains: Notch 4 extracellular truncation; Notch 4 intracellular domain] Length = 2003 Score = 24.6 bits (52), Expect(2) = 6.3 Identities = 8/20 (40%), Positives = 11/20 (55%) Frame = +1 Query: 478 CKRRPCIGVGELQEQPSVRH 537 C+ PC G+ Q+QP H Sbjct: 555 CRSSPCANGGQCQDQPGAFH 574 Score = 23.5 bits (49), Expect(2) = 6.3 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = +2 Query: 569 DMQRAIFCLCPLGW 610 D+ A FCLCP G+ Sbjct: 606 DLPGAFFCLCPSGF 619
>DNMBP_MOUSE (Q6TXD4) Dynamin-binding protein (Scaffold protein Tuba)| Length = 1580 Score = 29.6 bits (65), Expect = 7.2 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = +2 Query: 275 LLRRATLVQTFGQKDHVCLKEGSINIPPYAPPQKMKTHLVPPETPRSIFVYFRGLFYDTA 454 ++RR +++ + +KD V + S ++P A P++ KT PP PR+ L D + Sbjct: 572 IVRRFSIMDFYSEKDIV--RGSSNSLPSQAFPERRKTLRPPPPRPRTPTPISSHLLVDQS 629 Query: 455 NDPEGGYYARGAR 493 P R +R Sbjct: 630 PKPVPTLVVRPSR 642
>KLOT_HUMAN (Q9UEF7) Klotho precursor (EC 3.2.1.31) [Contains: Klotho peptide]| Length = 1012 Score = 29.6 bits (65), Expect = 7.2 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 8/42 (19%) Frame = +2 Query: 428 FRGLFYD--------TANDPEGGYYARGARASVWENFKNNPL 529 F+G F D A EGG+ G AS+W+ F ++PL Sbjct: 57 FQGTFPDGFLWAVGSAAYQTEGGWQQHGKGASIWDTFTHHPL 98
>KLOT_MACFA (Q8WP17) Klotho precursor (EC 3.2.1.31) [Contains: Klotho peptide]| Length = 1014 Score = 29.6 bits (65), Expect = 7.2 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 8/42 (19%) Frame = +2 Query: 428 FRGLFYD--------TANDPEGGYYARGARASVWENFKNNPL 529 F+G F D A EGG+ G AS+W+ F ++PL Sbjct: 59 FQGTFPDGFLWAVGSAAYQTEGGWQQHGKGASIWDTFTHHPL 100
>SPT6H_CAEBR (Q93148) Suppressor of Ty 6 homolog (Abnormal embryogenesis protein| 5) Length = 1521 Score = 29.6 bits (65), Expect = 7.2 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -3 Query: 257 QSPFLPDNGSMPQSHAARRRNDQHLLSGS 171 + F+ D+G P+ H R R D+H+ G+ Sbjct: 169 EDDFIEDDGDAPRRHRKRHRGDEHIPEGA 197
>GPR56_PONPY (Q50DM5) G-protein coupled receptor 56 precursor| Length = 687 Score = 29.6 bits (65), Expect = 7.2 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 8/82 (9%) Frame = +2 Query: 167 YWNRTAGADHFFVVPHDF--------GACFHYQEEKAIERGILPLLRRATLVQTFGQKDH 322 YWNR AG H HDF CF +QEE + PLL AT V ++ + Sbjct: 93 YWNRHAGRLHLLYGKHDFLLSDKASSLLCFQHQEESLAQGP--PLL--ATSVTSWWSPQN 148 Query: 323 VCLKEGSINIPPYAPPQKMKTH 388 + L + + P H Sbjct: 149 ISLPSAASFTFSFHSPSHTAAH 170
>RTXE_DROME (Q9NBX4) Probable RNA-directed DNA polymerase from transposon| X-element (EC 2.7.7.49) (Reverse transcriptase) Length = 908 Score = 29.3 bits (64), Expect = 9.4 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +2 Query: 380 KTHLVPPETPRSIFVYFRGLFYDTANDPEGGYYARGARASVWENFKNNPLFDIST 544 +TH ETP+ G TANDP GG GA + + + PL I+T Sbjct: 37 ETHCKGAETPKLF-----GFVAYTANDPSGGNAKGGAAILIKNSLAHFPLTPIAT 86 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,896,365 Number of Sequences: 219361 Number of extensions: 2400753 Number of successful extensions: 6058 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5788 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6057 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)