ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart20g05 |
|---|---|
| Clone Library Name | barley_pub |
>SYN2_MOUSE (Q64332) Synapsin-2 (Synapsin II)| Length = 586 Score = 37.0 bits (84), Expect = 0.036 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Frame = -2 Query: 530 PAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNG--IS 357 P + PP ++ RRLP SG P SSSS + + + +S P+R G + Sbjct: 460 PGQPQGMQPPGKVLPPRRLP-------SGPSLPSSSSSSS---SSSSSSSAPQRPGGPTT 509 Query: 356 WHASAASLRSSACERCSPEGAGKKRPAP 273 H A+S +S E +P+ A ++P P Sbjct: 510 THGDASSSSNSLAEAQAPQAAPAQKPQP 537
>HAT3_ARATH (P46602) Homeobox-leucine zipper protein HAT3 (HD-ZIP protein 3)| Length = 315 Score = 36.6 bits (83), Expect = 0.047 Identities = 33/77 (42%), Positives = 35/77 (45%), Gaps = 17/77 (22%) Frame = +1 Query: 367 FLRGIDVNRAPATGGAS-EDEEPGAXX-XXXXXXXXXGKR------RAPTRSGGG----- 507 FLRGIDVNRAP+T EDE G GK+ A GGG Sbjct: 75 FLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELMAAAGAVGGGRVEDN 134 Query: 508 EQERA----GAGSDDED 546 E ERA G GSDDED Sbjct: 135 EIERASCSLGGGSDDED 151
>HAT4_ARATH (Q05466) Homeobox-leucine zipper protein HAT4 (HD-ZIP protein 4)| (HD-ZIP protein ATHB-2) Length = 284 Score = 34.7 bits (78), Expect = 0.18 Identities = 22/60 (36%), Positives = 28/60 (46%) Frame = +1 Query: 367 FLRGIDVNRAPATGGASEDEEPGAXXXXXXXXXXXGKRRAPTRSGGGEQERAGAGSDDED 546 F+RGIDVNR P+T DE+ G GKR R + + + SDDED Sbjct: 67 FIRGIDVNRPPSTAEYG-DEDAGVSSPNSTVSSSTGKR--SEREEDTDPQGSRGISDDED 123
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 34.3 bits (77), Expect = 0.23 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%) Frame = -2 Query: 545 SSSSLPAPARSCSPPPLLVGARRLPLRLDSVLSGDDA----------PGSSSSLAPPVAG 396 +SSS+PA + S + L + +P S+LS A P SSSS P + Sbjct: 18 ASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASS 77 Query: 395 ARLTSIPRRNGISWHASAASLRSSA 321 + +TS+ + +S+ASL SS+ Sbjct: 78 SFITSLVSSSSQQSSSSSASLTSSS 102
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 34.3 bits (77), Expect = 0.23 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Frame = -2 Query: 530 PAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNG--IS 357 P + PP ++ RRLP SG P SSSS + + + +S P+R G S Sbjct: 460 PGQPQGMQPPGKVLPPRRLP-------SGPSLPPSSSSSS---SSSSSSSAPQRPGGPTS 509 Query: 356 WHASAASLRSSACERCSPEGAGKKRPAP 273 +A+S +S E +P+ A ++P P Sbjct: 510 TQVNASSSSNSLAEPQAPQAAPPQKPQP 537
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 33.9 bits (76), Expect = 0.31 Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 3/88 (3%) Frame = -2 Query: 527 APARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNGISWHA 348 AP S SPPP+ GA P R S P S+ P+ T P++ + Sbjct: 690 APQTSSSPPPVRRGASSSPQRRQS-------PSPSTR---PIRRVSRTPEPKKIKKAASP 739 Query: 347 SAASLRSSACERC---SPEGAGKKRPAP 273 S S+R + R SPE A KK PAP Sbjct: 740 SPQSVRRVSSSRSVSGSPEPAAKKPPAP 767
>RAI1_MOUSE (Q61818) Retinoic acid-induced protein 1| Length = 1889 Score = 33.1 bits (74), Expect = 0.52 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = -1 Query: 378 PAKERHLVARQRRQPPIICMRALLAGGGRKEEAGAIPGLLQLLLAPQRHR 229 PAK+R L+ R G GR+E A + PGLL+ + +PQR R Sbjct: 1216 PAKKRSLILRSNNGS---------GGDGREERAESSPGLLRRMASPQRAR 1256
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 33.1 bits (74), Expect = 0.52 Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 7/111 (6%) Frame = -2 Query: 545 SSSSLPAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRN 366 S S P ++ SPPP+ GA P R S P S+ P+ T P++ Sbjct: 697 SPSPRPRAPQTSSPPPVRRGASSSPQRRQS-------PSPSTR---PIRRVSRTPEPKKI 746 Query: 365 GISWHASAASLRSSACERC---SPEGAGKKRPAPF----QDCCSCCWRPSV 234 + S S+R + R SPE A KK PAP S W P+V Sbjct: 747 KKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPTSPVQSQSPSTNWSPAV 797
>EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 393 Score = 32.7 bits (73), Expect = 0.68 Identities = 24/80 (30%), Positives = 31/80 (38%) Frame = -2 Query: 530 PAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNGISWH 351 P P S PPP PL + S+S LA +AGA+L + R S Sbjct: 190 PPPTGSTPPPPP-------PLPAGGAQGTNHDESSASGLAAALAGAKLRRVQRPEDASGG 242 Query: 350 ASAASLRSSACERCSPEGAG 291 +S + S R S G G Sbjct: 243 SSPSGTSKSDANRASSGGGG 262
>EVL_MOUSE (P70429) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 414 Score = 32.7 bits (73), Expect = 0.68 Identities = 24/80 (30%), Positives = 31/80 (38%) Frame = -2 Query: 530 PAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNGISWH 351 P P S PPP PL + S+S LA +AGA+L + R S Sbjct: 190 PPPTGSTPPPPP-------PLPAGGAQGTNHDESSASGLAAALAGAKLRRVQRPEDASGG 242 Query: 350 ASAASLRSSACERCSPEGAG 291 +S + S R S G G Sbjct: 243 SSPSGTSKSDANRASSGGGG 262
>KAZD1_HUMAN (Q96I82) Kazal-type serine protease inhibitor domain-containing| protein 1 precursor Length = 304 Score = 32.7 bits (73), Expect = 0.68 Identities = 26/90 (28%), Positives = 31/90 (34%), Gaps = 3/90 (3%) Frame = -2 Query: 506 PPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNGISWHASAASLRS 327 PPP A LP+ L ++ L PP GAR + P W A Sbjct: 3 PPPRPAAALALPVLLLLLVV----------LTPPPTGARPSPGPDYLRRGWMRLLAE--G 50 Query: 326 SACERCSPEGAGKKR---PAPFQDCCSCCW 246 C C PE R +D C CCW Sbjct: 51 EGCAPCRPEECAAPRGCLAGRVRDACGCCW 80
>EVL_HUMAN (Q9UI08) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 416 Score = 32.7 bits (73), Expect = 0.68 Identities = 23/81 (28%), Positives = 30/81 (37%) Frame = -2 Query: 533 LPAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNGISW 354 +P P +PPP PL S S LA +AGA+L + R S Sbjct: 190 VPPPPTGATPPP------PPPLPAGGAQGSSHDESSMSGLAAAIAGAKLRRVQRPEDASG 243 Query: 353 HASAASLRSSACERCSPEGAG 291 +S + S R S G G Sbjct: 244 GSSPSGTSKSDANRASSGGGG 264
>EVL_PONPY (Q5R896) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 422 Score = 32.3 bits (72), Expect = 0.89 Identities = 23/81 (28%), Positives = 30/81 (37%) Frame = -2 Query: 533 LPAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNGISW 354 +P P +PPP PL S S LA +AGA+L + R S Sbjct: 196 VPPPPTGATPPP------PPPLPAGGAQGSSHDESSVSGLAAAIAGAKLRRVQRPEDASG 249 Query: 353 HASAASLRSSACERCSPEGAG 291 +S + S R S G G Sbjct: 250 GSSPSGTSKSDANRASSGGGG 270
>CAC1S_RABIT (P07293) Voltage-dependent L-type calcium channel alpha-1S subunit| (Voltage-gated calcium channel alpha subunit Cav1.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 3, skeletal muscle) Length = 1873 Score = 31.6 bits (70), Expect = 1.5 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = -2 Query: 434 PGSSSSLAPPVAGARLTSIPRRNGISWHASAASLRSSACERCSPEGAGKKRPAP 273 PG + APP + ++ P G + SL+ A +R S EG+ +RPAP Sbjct: 1729 PGMPINQAPPAPCQQPSTDPPERGQRRTSLTGSLQDEAPQRRSSEGSTPRRPAP 1782
>INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)| (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase) (Phosphatidylinositol polyphosphate 5-phosphatase type IV) Length = 644 Score = 31.2 bits (69), Expect = 2.0 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Frame = -2 Query: 527 APARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTS--IPRRN 366 APA SCSPP L + +P + VLS + GS SS P++G +S +P R+ Sbjct: 123 APAHSCSPPCLSTSLQEIP-KSRGVLSSE--RGSPSSGGNPLSGVASSSPNLPHRD 175
>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)| Length = 701 Score = 30.8 bits (68), Expect = 2.6 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -2 Query: 530 PAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARL 387 PAPAR PPP + G+R P + G +PG+ +L + G+ L Sbjct: 568 PAPARPTMPPPQVSGSRSSP-PAPPLPPGSGSPGTPQALPRRLVGSSL 614
>LAMBV_CHICK (Q01636) Laminin beta-1 chain variant (Laminin beta-1-2 chain)| (Fragment) Length = 198 Score = 30.8 bits (68), Expect = 2.6 Identities = 27/90 (30%), Positives = 34/90 (37%) Frame = -2 Query: 539 SSLPAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNGI 360 S P AR SPPP LP R +V +G D G S PP A G Sbjct: 36 SRAPPHARPRSPPPPAPSPPPLPPRPAAVRAGRDRVGRVFSRLPPGCAA---------GS 86 Query: 359 SWHASAASLRSSACERCSPEGAGKKRPAPF 270 + A+ L A + G +RP P+ Sbjct: 87 CYPATGDLLVGRAPRLSASSTCGLRRPQPY 116
>CBX2_HUMAN (Q14781) Chromobox protein homolog 2| Length = 532 Score = 30.4 bits (67), Expect = 3.4 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 3/66 (4%) Frame = -2 Query: 533 LPAPARSCSPPPL---LVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNG 363 L APA S PPPL + G L G A + +LA + G + S P R G Sbjct: 193 LGAPA-SKLPPPLSAPVAGLAALKAHAKEACGGPSAMATPENLASLMKG--MASSPGRGG 249 Query: 362 ISWHAS 345 ISW +S Sbjct: 250 ISWQSS 255
>DLX3_HUMAN (O60479) Homeobox protein DLX-3| Length = 287 Score = 30.4 bits (67), Expect = 3.4 Identities = 26/67 (38%), Positives = 30/67 (44%) Frame = -2 Query: 545 SSSSLPAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRN 366 SS S PAPARS PPPL A P LD P +S A ++G L P + Sbjct: 219 SSHSTPAPARSQLPPPLPYSAS--PSYLDD-------PTNSWYHAQNLSGPHLQQQPPQP 269 Query: 365 GISWHAS 345 HAS Sbjct: 270 ATLHHAS 276
>ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein| ATHB-4) Length = 318 Score = 30.4 bits (67), Expect = 3.4 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 12/72 (16%) Frame = +1 Query: 367 FLRGIDVNRAPATGGASEDEEPGAXXXX--XXXXXXXGKRRAPTRSGGGEQERA------ 522 FLRG +VNRA ++ + EE A G +R + GG++ A Sbjct: 83 FLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSGNKRDLAVARGGDENEAERASCS 142 Query: 523 ----GAGSDDED 546 GSDDED Sbjct: 143 RGGGSGGSDDED 154
>AKAP8_CANFA (Q5VK71) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)| (AKAP 95) Length = 698 Score = 30.0 bits (66), Expect = 4.4 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 3/86 (3%) Frame = -2 Query: 530 PAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAG---ARLTSIPRRNGI 360 P+P+R PPP L P D + G G + P G R+ PRR G Sbjct: 241 PSPSR---PPPSLFSQSMAP---DFGVMGMQGAGGYDNSVPYGCGRSQTRMRDRPRRRGF 294 Query: 359 SWHASAASLRSSACERCSPEGAGKKR 282 +RC P+G G+KR Sbjct: 295 --------------DRCGPDGMGRKR 306
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 30.0 bits (66), Expect = 4.4 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = -2 Query: 530 PAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPV 402 PA A S PP+L A P+ L S +PG +SS PP+ Sbjct: 898 PAAAASIKSPPVLGSAAASPVHLKSPSLPAPSPGWTSSPKPPL 940
>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)| Length = 1426 Score = 30.0 bits (66), Expect = 4.4 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = -2 Query: 530 PAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPV 402 PA A S PP+L A P+ L S +PG +SS PP+ Sbjct: 899 PAAAASIKSPPVLGSAAASPVHLKSPSLPAPSPGWTSSPKPPL 941
>LPHN1_RAT (O88917) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) (CIRL-1) Length = 1515 Score = 29.6 bits (65), Expect = 5.8 Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Frame = -2 Query: 497 LLVGARRLPL---RLDSVLSGDDAPGSSSSLAPPVAGAR-LTSIPRRNGISWHASAASLR 330 LL A PL R SVL D S S A A +R L+S P R+ + +AS A+LR Sbjct: 1376 LLYKALEEPLLLPRAQSVLYQSDLDESESCTAEDGATSRPLSSPPGRDSL--YASGANLR 1433 Query: 329 SS-ACERCSPEGAGKKRPAP 273 S + SPEG + P P Sbjct: 1434 DSPSYPDSSPEGPNEALPPP 1453
>LPHN1_BOVIN (O97831) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) Length = 1472 Score = 29.6 bits (65), Expect = 5.8 Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Frame = -2 Query: 497 LLVGARRLPL---RLDSVLSGDDAPGSSSSLAPPVAGAR-LTSIPRRNGISWHASAASLR 330 LL A PL R SVL D S S A A +R L+S P R+ + +AS A+LR Sbjct: 1333 LLYKALEEPLLLPRAQSVLYQSDLDESESCTAEDGATSRPLSSPPGRDSL--YASGANLR 1390 Query: 329 SS-ACERCSPEGAGKKRPAP 273 S + SPEG + P P Sbjct: 1391 DSPSYPDSSPEGPSEALPPP 1410
>CACM_YEAST (P80235) Putative mitochondrial carnitine O-acetyltransferase (EC| 2.3.1.7) Length = 687 Score = 29.6 bits (65), Expect = 5.8 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = -2 Query: 497 LLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRR 369 +L AR + + + S DD SSSSLA A L +IPR+ Sbjct: 366 ILSFARGVTKNVVDIFSDDDGKPSSSSLASAAHSANLITIPRK 408
>LPHN1_MOUSE (Q80TR1) Latrophilin-1 (Calcium-independent alpha-latrotoxin receptor| 1) (Lectomedin-2) (Fragment) Length = 1406 Score = 29.6 bits (65), Expect = 5.8 Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Frame = -2 Query: 497 LLVGARRLPL---RLDSVLSGDDAPGSSSSLAPPVAGAR-LTSIPRRNGISWHASAASLR 330 LL A PL R SVL D S S A A +R L+S P R+ + +AS A+LR Sbjct: 1267 LLYKALEEPLLLPRAQSVLYQSDLDESESCTAEDGATSRPLSSPPGRDSL--YASGANLR 1324 Query: 329 SS-ACERCSPEGAGKKRPAP 273 S + SPEG + P P Sbjct: 1325 DSPSYPDSSPEGPNEALPPP 1344
>LPHN1_HUMAN (O94910) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) (Lectomedin-2) Length = 1474 Score = 29.6 bits (65), Expect = 5.8 Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Frame = -2 Query: 497 LLVGARRLPL---RLDSVLSGDDAPGSSSSLAPPVAGAR-LTSIPRRNGISWHASAASLR 330 LL A PL R SVL D S S A A +R L+S P R+ + +AS A+LR Sbjct: 1335 LLYKALEEPLLLPRAQSVLYQSDLDESESCTAEDGATSRPLSSPPGRDSL--YASGANLR 1392 Query: 329 SS-ACERCSPEGAGKKRPAP 273 S + SPEG + P P Sbjct: 1393 DSPSYPDSSPEGPSEALPPP 1412
>PDLI5_RAT (Q62920) PDZ and LIM domain protein 5 (Enigma homolog) (Enigma-like| PDZ and LIM domains protein) Length = 591 Score = 29.6 bits (65), Expect = 5.8 Identities = 21/91 (23%), Positives = 38/91 (41%) Frame = -2 Query: 545 SSSSLPAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRN 366 SS + P P + +PPPL S L P ++ +PP G +PR+ Sbjct: 158 SSHASPPPVAAVTPPPLSA----------SGLHASANPSAAQCSSPPNTGKPAVHVPRQP 207 Query: 365 GISWHASAASLRSSACERCSPEGAGKKRPAP 273 ++ S ++ + +R +G K++ P Sbjct: 208 TVTSVCSESAQELAEGQRRGSQGDIKQQNGP 238
>I11RA_RAT (Q99MF4) Interleukin-11 receptor alpha chain precursor| (IL-11R-alpha) (IL-11RA) Length = 431 Score = 29.3 bits (64), Expect = 7.6 Identities = 18/41 (43%), Positives = 20/41 (48%) Frame = -2 Query: 497 LLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIP 375 L VGA L L L SG D P LAP + G +L IP Sbjct: 381 LAVGALALGLWLRLRRSGKDGPQKPGFLAPMIPGDKLPGIP 421
>Y215_ADE02 (P03291) Hypothetical protein F-215| Length = 215 Score = 29.3 bits (64), Expect = 7.6 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = -2 Query: 518 RSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNGISWHASAA 339 R C+ PP + L L + LSG +PG SSS GAR R S + A Sbjct: 66 RFCARPP----STTPKLILSNSLSGSSSPGPSSSR----RGARFR---RSTAASSRSPAT 114 Query: 338 SLRS-SACERCSP 303 S RS S+C R +P Sbjct: 115 SARSTSSCPRAAP 127
>BORG5_MOUSE (Q91W92) Cdc42 effector protein 1 (Binder of Rho GTPases 5)| Length = 409 Score = 29.3 bits (64), Expect = 7.6 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 2/78 (2%) Frame = -2 Query: 539 SSLPAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPR--RN 366 +SLPAPA + SP P + SVL P + + +P G ++ S R+ Sbjct: 279 TSLPAPAAASSP-----SRGHFPNGVTSVLG----PAAEAKPSPVGEGPQVPSNMTFDRH 329 Query: 365 GISWHASAASLRSSACER 312 G SW AS AS +S R Sbjct: 330 GASWGASRASWGASRASR 347
>CAC1H_RAT (Q9EQ60) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) Length = 2359 Score = 29.3 bits (64), Expect = 7.6 Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 5/84 (5%) Frame = -2 Query: 518 RSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNG-----ISW 354 R PPPL+ P+ P SS +L VA A L S +G + Sbjct: 1066 RGSLPPPLITHTAATPM---------PTPKSSPNL--DVAHALLDSRRSSSGSVDPQLGD 1114 Query: 353 HASAASLRSSACERCSPEGAGKKR 282 S ASLRSS C P AG R Sbjct: 1115 QKSLASLRSSPCTPWGPNSAGSSR 1138
>DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-containing| protein A) (Single-strand DNA-binding protein NF-GMB) Length = 372 Score = 28.9 bits (63), Expect = 9.9 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 472 GKRRAPTRSGGGEQERAGAGSDD 540 G+RR P R+ GE+E G+GS + Sbjct: 183 GRRRGPPRNYAGEEEEEGSGSSE 205
>GLAS_DROME (P13360) Protein glass| Length = 604 Score = 28.9 bits (63), Expect = 9.9 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Frame = -2 Query: 530 PAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGSSSSLA---PPVAGARLTSIPRRNGI 360 PAP + PPL VG + P +P ++SSLA P G + + P ++ Sbjct: 351 PAPTGLGALPPLTVGEKESP-----------SPPANSSLAGYYPTGVGNQGYTPPHKSPT 399 Query: 359 SWHASAASLRSSACE 315 S+ A+A L SA E Sbjct: 400 SYQAAALGLSLSAFE 414
>CAC1H_MOUSE (O88427) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) Length = 2365 Score = 28.9 bits (63), Expect = 9.9 Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 7/86 (8%) Frame = -2 Query: 518 RSCSPPPLLVGARRLPL-------RLDSVLSGDDAPGSSSSLAPPVAGARLTSIPRRNGI 360 R PPPL+ P+ LD + D+ SSS P G + Sbjct: 1066 RGSLPPPLITHTAATPMPTPKSSPHLDMAHTLLDSRRSSSGSVDPQLGDQ---------- 1115 Query: 359 SWHASAASLRSSACERCSPEGAGKKR 282 S ASLRSS C P AG R Sbjct: 1116 ---KSLASLRSSPCAPWGPNSAGSSR 1138
>ARI3A_HUMAN (Q99856) AT-rich interactive domain-containing protein 3A (ARID| domain-containing protein 3A) (B-cell regulator of IgH transcription) (Bright) (E2F-binding protein 1) Length = 593 Score = 28.9 bits (63), Expect = 9.9 Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 11/113 (9%) Frame = +1 Query: 238 LGRQQQLQQSWNGAGLFFP----APSGEQRSHADDRRLAALACHEMPFLRGIDVNRA--- 396 L RQQ+ +Q P AP G R+ D+ R A + + + RA Sbjct: 11 LQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAAAA 70 Query: 397 ----PATGGASEDEEPGAXXXXXXXXXXXGKRRAPTRSGGGEQERAGAGSDDE 543 PA+ G SED PG+ G R G GE+ SD++ Sbjct: 71 GLGHPASPGGSEDGPPGSEEEDAAREGTPGS-PGRGREGPGEEHFEDMASDED 122
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 28.9 bits (63), Expect = 9.9 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Frame = -2 Query: 545 SSSSLPAPARSCSPPPLLVGARRLPLRLDSVLSGDDAPGS-SSSLAPPVAGARLTSIPRR 369 +SSS + S SP P R P R D V G+ P + + APP A + + P R Sbjct: 176 ASSSSGSSGSSGSPGPSAAPRRWSPARGDPV--GEPGPAARPRTPAPPAQPAAVAAAPAR 233 Query: 368 NGISWHASAASLRSSACERCSPEGAG 291 G + AS A+ SA P G G Sbjct: 234 RGPASPASPAAGPVSA-----PGGGG 254
>LYOX_BOVIN (P33072) Protein-lysine 6-oxidase precursor (EC 1.4.3.13) (Lysyl| oxidase) Length = 418 Score = 28.9 bits (63), Expect = 9.9 Identities = 13/42 (30%), Positives = 19/42 (45%) Frame = -2 Query: 359 SWHASAASLRSSACERCSPEGAGKKRPAPFQDCCSCCWRPSV 234 +W A SL+ A RC+P A ++P Q WR + Sbjct: 4 AWTALLGSLQLCALVRCAPPAASHRQPPREQAAAPGAWRQKI 45
>DBPA_XENLA (Q5PQD5) DNA-binding protein A (Cold shock domain-containing| protein A) Length = 361 Score = 28.9 bits (63), Expect = 9.9 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 472 GKRRAPTRSGGGEQERAGAGSDD 540 G+RR P R+ GE+E G+GS + Sbjct: 175 GRRRGPPRNYAGEEEEEGSGSSE 197
>DBPA_RAT (Q62764) DNA-binding protein A (Cold shock domain-containing| protein A) (Muscle Y-box protein YB2) (Y-box-binding protein-A) (RYB-A) Length = 361 Score = 28.9 bits (63), Expect = 9.9 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 472 GKRRAPTRSGGGEQERAGAGSDD 540 G+RR P R+ GE+E G+GS + Sbjct: 175 GRRRGPPRNYAGEEEEEGSGSSE 197
>DBPA_MOUSE (Q9JKB3) DNA-binding protein A (Cold shock domain-containing| protein A) (Y-box protein 3) Length = 361 Score = 28.9 bits (63), Expect = 9.9 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 472 GKRRAPTRSGGGEQERAGAGSDD 540 G+RR P R+ GE+E G+GS + Sbjct: 175 GRRRGPPRNYAGEEEEEGSGSSE 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.128 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,878,785 Number of Sequences: 219361 Number of extensions: 1059763 Number of successful extensions: 3030 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 2820 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3015 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
