ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart20f10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 385 bits (194), Expect = e-103 Identities = 254/274 (92%) Strand = Plus / Plus Query: 274 tcggcggctccggtgcctccttcgaagacgagccgccgctcctcgaggagctcggcatca 333 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9988841 tcggcggctccggggcctccttcgaggacgagccgccgctcctcgaggagctcggcatca 9988900 Query: 334 acacgcgccagatctggcggaagacgctctccatcctccacccgctccgctccgccgacc 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9988901 acacgcgccagatctggcggaagacgctctccatcctccacccgctccgctccgccgatc 9988960 Query: 394 cgtcgctccacgcagacgccgatctctccggccccttcctgttcctcttatccttcggtc 453 | || |||||||| |||||||| ||||| ||||| ||||| |||||| | |||||||| | Sbjct: 9988961 cctccctccacgccgacgccgacctctcgggcccgttcctcttcctcctctccttcggcc 9989020 Query: 454 tcttccagctcctggctggtaagttccacttcgggatcgtcctcgggtgggtcactgtcg 513 |||||||||| || || || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 9989021 tcttccagctgctcgccggcaagttccacttcgggatcgtcctcgggtgggtcaccgtcg 9989080 Query: 514 cctccctcttcctctacttcgtcttgtccatgct 547 | ||||||||||||||||||||||| |||||||| Sbjct: 9989081 cttccctcttcctctacttcgtcttctccatgct 9989114 Score = 123 bits (62), Expect = 6e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 82 tgccaccggtggtcttcaacccctccacaccagcccaccgccgccaccctatccccggac 141 |||| ||||||||||||| |||||||| || ||||||||||||| ||| ||| || Sbjct: 9988640 tgccgccggtggtcttcactccctccacccctacccaccgccgccatcctcccccaggga 9988699 Query: 142 ccggcgcctctccgccacccgccttcgcgcctccccgcccctccacctcctccgccgcca 201 ||||| |||| ||||| || ||||||||||||||||||||||||||||| |||| ||| | Sbjct: 9988700 ccggcccctccccgccgccggccttcgcgcctccccgcccctccacctcatccggcgcga 9988759 Query: 202 accccctgcccttcatgtccttcgac 227 |||| || |||||||||||||||||| Sbjct: 9988760 accctctccccttcatgtccttcgac 9988785 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 174 ccccgcccctccacctcctccgcc 197 |||||||||||||||||||||||| Sbjct: 19056202 ccccgcccctccacctcctccgcc 19056179 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 22 acccagatctcggaaccctcgcggtcgccgc 52 |||||||||||| ||||||||| |||||||| Sbjct: 9988561 acccagatctcgaaaccctcgccgtcgccgc 9988591 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 35076849 cctccacctcctccgccgcca 35076869 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 cagcccaccgccgccaccctatccc 136 ||||||||||||||||||| ||||| Sbjct: 12542591 cagcccaccgccgccacccgatccc 12542615 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 6356416 ctccacctcctccgccgcca 6356397 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ccctccacctcctccgccgc 199 |||||||||||||||||||| Sbjct: 954391 ccctccacctcctccgccgc 954410
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 385 bits (194), Expect = e-103 Identities = 254/274 (92%) Strand = Plus / Plus Query: 274 tcggcggctccggtgcctccttcgaagacgagccgccgctcctcgaggagctcggcatca 333 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 38757 tcggcggctccggggcctccttcgaggacgagccgccgctcctcgaggagctcggcatca 38816 Query: 334 acacgcgccagatctggcggaagacgctctccatcctccacccgctccgctccgccgacc 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 38817 acacgcgccagatctggcggaagacgctctccatcctccacccgctccgctccgccgatc 38876 Query: 394 cgtcgctccacgcagacgccgatctctccggccccttcctgttcctcttatccttcggtc 453 | || |||||||| |||||||| ||||| ||||| ||||| |||||| | |||||||| | Sbjct: 38877 cctccctccacgccgacgccgacctctcgggcccgttcctcttcctcctctccttcggcc 38936 Query: 454 tcttccagctcctggctggtaagttccacttcgggatcgtcctcgggtgggtcactgtcg 513 |||||||||| || || || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 38937 tcttccagctgctcgccggcaagttccacttcgggatcgtcctcgggtgggtcaccgtcg 38996 Query: 514 cctccctcttcctctacttcgtcttgtccatgct 547 | ||||||||||||||||||||||| |||||||| Sbjct: 38997 cttccctcttcctctacttcgtcttctccatgct 39030 Score = 123 bits (62), Expect = 6e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 82 tgccaccggtggtcttcaacccctccacaccagcccaccgccgccaccctatccccggac 141 |||| ||||||||||||| |||||||| || ||||||||||||| ||| ||| || Sbjct: 38556 tgccgccggtggtcttcactccctccacccctacccaccgccgccatcctcccccaggga 38615 Query: 142 ccggcgcctctccgccacccgccttcgcgcctccccgcccctccacctcctccgccgcca 201 ||||| |||| ||||| || ||||||||||||||||||||||||||||| |||| ||| | Sbjct: 38616 ccggcccctccccgccgccggccttcgcgcctccccgcccctccacctcatccggcgcga 38675 Query: 202 accccctgcccttcatgtccttcgac 227 |||| || |||||||||||||||||| Sbjct: 38676 accctctccccttcatgtccttcgac 38701 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 22 acccagatctcggaaccctcgcggtcgccgc 52 |||||||||||| ||||||||| |||||||| Sbjct: 38477 acccagatctcgaaaccctcgccgtcgccgc 38507
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 385 bits (194), Expect = e-103 Identities = 254/274 (92%) Strand = Plus / Plus Query: 274 tcggcggctccggtgcctccttcgaagacgagccgccgctcctcgaggagctcggcatca 333 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9986962 tcggcggctccggggcctccttcgaggacgagccgccgctcctcgaggagctcggcatca 9987021 Query: 334 acacgcgccagatctggcggaagacgctctccatcctccacccgctccgctccgccgacc 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9987022 acacgcgccagatctggcggaagacgctctccatcctccacccgctccgctccgccgatc 9987081 Query: 394 cgtcgctccacgcagacgccgatctctccggccccttcctgttcctcttatccttcggtc 453 | || |||||||| |||||||| ||||| ||||| ||||| |||||| | |||||||| | Sbjct: 9987082 cctccctccacgccgacgccgacctctcgggcccgttcctcttcctcctctccttcggcc 9987141 Query: 454 tcttccagctcctggctggtaagttccacttcgggatcgtcctcgggtgggtcactgtcg 513 |||||||||| || || || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 9987142 tcttccagctgctcgccggcaagttccacttcgggatcgtcctcgggtgggtcaccgtcg 9987201 Query: 514 cctccctcttcctctacttcgtcttgtccatgct 547 | ||||||||||||||||||||||| |||||||| Sbjct: 9987202 cttccctcttcctctacttcgtcttctccatgct 9987235 Score = 123 bits (62), Expect = 6e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 82 tgccaccggtggtcttcaacccctccacaccagcccaccgccgccaccctatccccggac 141 |||| ||||||||||||| |||||||| || ||||||||||||| ||| ||| || Sbjct: 9986761 tgccgccggtggtcttcactccctccacccctacccaccgccgccatcctcccccaggga 9986820 Query: 142 ccggcgcctctccgccacccgccttcgcgcctccccgcccctccacctcctccgccgcca 201 ||||| |||| ||||| || ||||||||||||||||||||||||||||| |||| ||| | Sbjct: 9986821 ccggcccctccccgccgccggccttcgcgcctccccgcccctccacctcatccggcgcga 9986880 Query: 202 accccctgcccttcatgtccttcgac 227 |||| || |||||||||||||||||| Sbjct: 9986881 accctctccccttcatgtccttcgac 9986906 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 174 ccccgcccctccacctcctccgcc 197 |||||||||||||||||||||||| Sbjct: 19050243 ccccgcccctccacctcctccgcc 19050220 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 22 acccagatctcggaaccctcgcggtcgccgc 52 |||||||||||| ||||||||| |||||||| Sbjct: 9986682 acccagatctcgaaaccctcgccgtcgccgc 9986712 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 35166921 cctccacctcctccgccgcca 35166941 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 cagcccaccgccgccaccctatccc 136 ||||||||||||||||||| ||||| Sbjct: 12539354 cagcccaccgccgccacccgatccc 12539378 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 6355629 ctccacctcctccgccgcca 6355610 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ccctccacctcctccgccgc 199 |||||||||||||||||||| Sbjct: 954389 ccctccacctcctccgccgc 954408
>dbj|AK064364.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-C01, full insert sequence Length = 1407 Score = 369 bits (186), Expect = 7e-99 Identities = 252/274 (91%) Strand = Plus / Plus Query: 274 tcggcggctccggtgcctccttcgaagacgagccgccgctcctcgaggagctcggcatca 333 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 356 tcggcggctccggggcctccttcgaggacgagccgccgctcctcgaggagctcggcatca 415 Query: 334 acacgcgccagatctggcggaagacgctctccatcctccacccgctccgctccgccgacc 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 416 acacgcgccagatctggcggaagacgctctccatcctccacccgctccgctccgccgatc 475 Query: 394 cgtcgctccacgcagacgccgatctctccggccccttcctgttcctcttatccttcggtc 453 | || |||||||| |||||||| ||||| ||||| ||||| ||||| | |||||||| | Sbjct: 476 cctccctccacgccgacgccgacctctcgggcccgttcctcttcctactctccttcggcc 535 Query: 454 tcttccagctcctggctggtaagttccacttcgggatcgtcctcgggtgggtcactgtcg 513 ||||| |||| || || || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 536 tcttctagctgctcgccggcaagttccacttcgggatcgtcctcgggtgggtcaccgtcg 595 Query: 514 cctccctcttcctctacttcgtcttgtccatgct 547 | ||||||||||||||||||||||| |||||||| Sbjct: 596 cttccctcttcctctacttcgtcttctccatgct 629 Score = 123 bits (62), Expect = 6e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 82 tgccaccggtggtcttcaacccctccacaccagcccaccgccgccaccctatccccggac 141 |||| ||||||||||||| |||||||| || ||||||||||||| ||| ||| || Sbjct: 155 tgccgccggtggtcttcactccctccacccctacccaccgccgccatcctcccccaggga 214 Query: 142 ccggcgcctctccgccacccgccttcgcgcctccccgcccctccacctcctccgccgcca 201 ||||| |||| ||||| || ||||||||||||||||||||||||||||| |||| ||| | Sbjct: 215 ccggcccctccccgccgccggccttcgcgcctccccgcccctccacctcatccggcgcga 274 Query: 202 accccctgcccttcatgtccttcgac 227 |||| || |||||||||||||||||| Sbjct: 275 accctctccccttcatgtccttcgac 300 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 22 acccagatctcggaaccctcgcggtcgccgc 52 |||||||||||| ||||||||| |||||||| Sbjct: 76 acccagatctcgaaaccctcgccgtcgccgc 106
>dbj|AK073108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023N20, full insert sequence Length = 930 Score = 307 bits (155), Expect = 2e-80 Identities = 209/227 (92%) Strand = Plus / Plus Query: 321 gagctcggcatcaacacgcgccagatctggcggaagacgctctccatcctccacccgctc 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gagctcggcatcaacacgcgccagatctggcggaagacgctctccatcctccacccgctc 60 Query: 381 cgctccgccgacccgtcgctccacgcagacgccgatctctccggccccttcctgttcctc 440 ||||||||||| || || |||||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 61 cgctccgccgatccctccctccacgccgacgccgacctctcgggcccgttcctcttcctc 120 Query: 441 ttatccttcggtctcttccagctcctggctggtaagttccacttcgggatcgtcctcggg 500 | |||||||| ||||||||||| || || || ||||||||||||||||||||||||||| Sbjct: 121 ctctccttcggcctcttccagctgctcgccggcaagttccacttcgggatcgtcctcggg 180 Query: 501 tgggtcactgtcgcctccctcttcctctacttcgtcttgtccatgct 547 |||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 181 tgggtcaccgtcgcttccctcttcctctacttcgtcttctccatgct 227
>gb|BT019216.1| Zea mays clone Contig889.F mRNA sequence Length = 1036 Score = 295 bits (149), Expect = 8e-77 Identities = 230/257 (89%) Strand = Plus / Plus Query: 291 tccttcgaagacgagccgccgctcctcgaggagctcggcatcaacacgcgccagatctgg 350 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 61 tccttcgaggacgagccgccgctcctcgaggagctcggtatcaacacgcgccagatctgg 120 Query: 351 cggaagacgctctccatcctccacccgctccgctccgccgacccgtcgctccacgcagac 410 ||||||||| |||||||||||||||||||||||||||||||||| || |||||||| ||| Sbjct: 121 cggaagacgatctccatcctccacccgctccgctccgccgacccctccctccacgccgac 180 Query: 411 gccgatctctccggccccttcctgttcctcttatccttcggtctcttccagctcctggct 470 ||||| || || ||||| ||||| |||||| | ||||| || || ||||||||||| || Sbjct: 181 gccgacctgtcgggcccgttcctcttcctcctttcctttggactattccagctcctcgcg 240 Query: 471 ggtaagttccacttcgggatcgtcctcgggtgggtcactgtcgcctccctcttcctctac 530 || ||||||||||| |||||||| ||||| |||||||| || || || |||||||||||| Sbjct: 241 gggaagttccactttgggatcgtgctcggctgggtcaccgtggcgtctctcttcctctac 300 Query: 531 ttcgtcttgtccatgct 547 |||||||| |||||||| Sbjct: 301 ttcgtcttctccatgct 317
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 153 ccgccacccgccttcgcgcctccccgcccctccacctcctcc 194 |||||||||||| ||||||||||| ||||||| |||||||| Sbjct: 7568587 ccgccacccgcccgcgcgcctcccctcccctcctcctcctcc 7568546 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 cccctccacctcctccgccgcc 200 |||||||||||||||||||||| Sbjct: 16010862 cccctccacctcctccgccgcc 16010841 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 35642708 cctccacctcctccgccgcca 35642688 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 27202345 cctccacctcctccgccgcca 27202365 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ccgccacccgccttcgcgcc 172 |||||||||||||||||||| Sbjct: 31266324 ccgccacccgccttcgcgcc 31266343
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 153 ccgccacccgccttcgcgcctccccgcccctccacctcctcc 194 |||||||||||| ||||||||||| ||||||| |||||||| Sbjct: 162293 ccgccacccgcccgcgcgcctcccctcccctcctcctcctcc 162252
>ref|XM_468898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 174 ccccgcccctccacctcctccgcc 197 |||||||||||||||||||||||| Sbjct: 139 ccccgcccctccacctcctccgcc 116
>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete sequence Length = 171437 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 174 ccccgcccctccacctcctccgcc 197 |||||||||||||||||||||||| Sbjct: 101375 ccccgcccctccacctcctccgcc 101398
>gb|AY330343.1| Odocoileus hemionus prion protein (prnp) gene, complete cds Length = 65476 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 169 cgcctccccgcccctccacctcctccgccgcc 200 ||||||||||||||| |||||||||| ||||| Sbjct: 24957 cgcctccccgcccctgcacctcctcctccgcc 24988
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.12 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 172 ctccccgcc-cctccacctcctccgccgcca 201 ||||||||| ||||||||||||||||||||| Sbjct: 27872917 ctccccgccgcctccacctcctccgccgcca 27872947 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 ccctccacctcctccgccgcca 201 |||||||||||||||||||||| Sbjct: 22757478 ccctccacctcctccgccgcca 22757457
>dbj|AK073119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001C17, full insert sequence Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 172 ctccccgcc-cctccacctcctccgccgcca 201 ||||||||| ||||||||||||||||||||| Sbjct: 24 ctccccgccgcctccacctcctccgccgcca 54
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.12 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 172 ctccccgcc-cctccacctcctccgccgcca 201 ||||||||| ||||||||||||||||||||| Sbjct: 27896905 ctccccgccgcctccacctcctccgccgcca 27896935 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 ccctccacctcctccgccgcca 201 |||||||||||||||||||||| Sbjct: 23067388 ccctccacctcctccgccgcca 23067367
>ref|XM_479972.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgccaacccc 206 ||||||||||||||||||||| |||| Sbjct: 373 cctccacctcctccgccgccatcccc 348
>ref|XM_465568.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1885 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 cccctccacctcctccgccgcc 200 |||||||||||||||||||||| Sbjct: 168 cccctccacctcctccgccgcc 147
>gb|AC120984.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0026G02, complete sequence Length = 123472 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 ccctccacctcctccgccgcca 201 |||||||||||||||||||||| Sbjct: 118278 ccctccacctcctccgccgcca 118257
>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0088K21, complete sequence Length = 153239 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 ccctccacctcctccgccgcca 201 |||||||||||||||||||||| Sbjct: 17195 ccctccacctcctccgccgcca 17174
>gb|AC020908.7| Homo sapiens chromosome 19 clone CTD-2528A14, complete sequence Length = 174034 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 ctccacaccagcccaccgccgc 125 |||||||||||||||||||||| Sbjct: 150936 ctccacaccagcccaccgccgc 150957
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgccaacccc 206 ||||||||||||||||||||| |||| Sbjct: 2012263 cctccacctcctccgccgccatcccc 2012238
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 tcgcggtcgccgcggccatggc 61 |||||||||||||||||||||| Sbjct: 6481302 tcgcggtcgccgcggccatggc 6481281 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 cgcggtcgccgcggccatggc 61 ||||||||||||||||||||| Sbjct: 5770971 cgcggtcgccgcggccatggc 5770951 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cctcgcggtcgccgcggcca 57 |||||||||||||||||||| Sbjct: 8363970 cctcgcggtcgccgcggcca 8363951
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgccaacccc 206 ||||||||||||||||||||| |||| Sbjct: 5793 cctccacctcctccgccgccatcccc 5768
>dbj|AP004852.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1371_D04 Length = 105468 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 cccctccacctcctccgccgcc 200 |||||||||||||||||||||| Sbjct: 41797 cccctccacctcctccgccgcc 41776
>dbj|AP004787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0403C01 Length = 145635 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 cccctccacctcctccgccgcc 200 |||||||||||||||||||||| Sbjct: 9096 cccctccacctcctccgccgcc 9075
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgccaacccc 206 ||||||||||||||||||||| |||| Sbjct: 137461 cctccacctcctccgccgccatcccc 137436
>dbj|AK065847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042H05, full insert sequence Length = 1886 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 cccctccacctcctccgccgcc 200 |||||||||||||||||||||| Sbjct: 169 cccctccacctcctccgccgcc 148
>ref|XM_468520.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3336 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 81 cctccacctcctccgccgcca 61
>ref|XM_478424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2115 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 172 ctccccgcccctccacctcctccgccgcc 200 |||||| ||||||| |||||||||||||| Sbjct: 47 ctcccctcccctcctcctcctccgccgcc 19
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tcgccgcggccatggcgaagg 66 ||||||||||||||||||||| Sbjct: 1995668 tcgccgcggccatggcgaagg 1995648
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 77750 cctccacctcctccgccgcca 77770
>ref|XM_448682.1| Candida glabrata CBS138, CAGL0K10714g partial mRNA Length = 2118 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 caccggtggtcttcaacccct 105 ||||||||||||||||||||| Sbjct: 1213 caccggtggtcttcaacccct 1233
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03, from chromosome 3, complete sequence Length = 124550 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 cagcccaccgccgccaccctatccc 136 ||||||||||||||||||| ||||| Sbjct: 45350 cagcccaccgccgccacccgatccc 45326
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 caccggtggtcttcaacccct 105 ||||||||||||||||||||| Sbjct: 1043236 caccggtggtcttcaacccct 1043256
>emb|AJ010302.1|RSP010302 Rhodobacter sphaeroides photosynthetic gene cluster Length = 40707 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 tcgccgcggccatggcgaagg 66 ||||||||||||||||||||| Sbjct: 25482 tcgccgcggccatggcgaagg 25502
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 cagcccaccgccgccaccctatccc 136 ||||||||||||||||||| ||||| Sbjct: 134398 cagcccaccgccgccacccgatccc 134374
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 3579669 cctccacctcctccgccgcca 3579649
>gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene cluster, partial sequence Length = 66280 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 tcgccgcggccatggcgaagg 66 ||||||||||||||||||||| Sbjct: 50590 tcgccgcggccatggcgaagg 50610
>dbj|AK145702.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0031H06 product:sphingomyelin phosphodiesterase 1, acid lysosomal, full insert sequence Length = 2411 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 425 ccccttcctgttcctcttatc 445 ||||||||||||||||||||| Sbjct: 21 ccccttcctgttcctcttatc 1
>ref|XM_690805.1| PREDICTED: Danio rerio similar to Nesprin 1 (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin) (LOC567511), mRNA Length = 5865 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tctccatcctccacccgctcc 381 ||||||||||||||||||||| Sbjct: 1334 tctccatcctccacccgctcc 1314
>gb|S71770.1| carotenoid gene cluster: crtI=phytoene desaturase, crtB=phytoene synthase [Rhodobacter sphaeroides, Genomic, 3084 nt] Length = 3084 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 tcgccgcggccatggcgaagg 66 ||||||||||||||||||||| Sbjct: 946 tcgccgcggccatggcgaagg 966
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 172 ctccccgcccctccacctcctccgccgcc 200 |||||| ||||||| |||||||||||||| Sbjct: 19885086 ctcccctcccctcctcctcctccgccgcc 19885058 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 16436757 cctccacctcctccgccgcc 16436776
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 ccgcccctccacctcctccgccgcc 200 |||||||||| |||||||||||||| Sbjct: 4879619 ccgcccctcctcctcctccgccgcc 4879595
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 gctccgctccgccgacccgtcgctc 401 ||||||||||||||||||| ||||| Sbjct: 4534312 gctccgctccgccgacccgccgctc 4534336 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 ccgcccctccacctcctccgccgccaaccccc 207 ||||||| |||||| | ||||||||||||||| Sbjct: 997045 ccgccccgccaccttccccgccgccaaccccc 997014
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 98794 cctccacctcctccgccgcca 98814
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 159100 cctccacctcctccgccgcca 159080
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 53016 cctccacctcctccgccgcca 53036
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 172 ctccccgcccctccacctcctccgccgcc 200 |||||| ||||||| |||||||||||||| Sbjct: 49736 ctcccctcccctcctcctcctccgccgcc 49708
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 172 ctccccgcccctccacctcctccgccgcc 200 |||||| ||||||| |||||||||||||| Sbjct: 125245 ctcccctcccctcctcctcctccgccgcc 125217
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 3322 cctccacctcctccgccgcca 3302
>emb|BX511113.8| Zebrafish DNA sequence from clone DKEY-38J10 in linkage group 17, complete sequence Length = 191193 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tctccatcctccacccgctcc 381 ||||||||||||||||||||| Sbjct: 39393 tctccatcctccacccgctcc 39373
>dbj|AK111117.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-B10, full insert sequence Length = 458 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 122 cctccacctcctccgccgcca 142
>dbj|AK109007.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H05, full insert sequence Length = 1527 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 985 cctccacctcctccgccgcca 965
>dbj|AK073195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020J08, full insert sequence Length = 3335 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcca 201 ||||||||||||||||||||| Sbjct: 80 cctccacctcctccgccgcca 60
>dbj|AK068547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157I07, full insert sequence Length = 2372 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 cagcccaccgccgccaccctatccc 136 ||||||||||||||||||| ||||| Sbjct: 173 cagcccaccgccgccacccgatccc 197
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 ccgcccctccacctcctccgccgcc 200 |||||||||| |||||||||||||| Sbjct: 152027 ccgcccctcctcctcctccgccgcc 152003
>emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chromosome 2, complete sequence Length = 193932 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 514 cctccctcttcctctacttcgtctt 538 ||||||||||||||| ||||||||| Sbjct: 154877 cctccctcttcctcttcttcgtctt 154901
>ref|NM_123898.2| Arabidopsis thaliana beta-amylase AT5G45300 transcript variant AT5G45300.1 mRNA, complete cds Length = 2271 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 268 cctccacctcctccgccgcc 249
>ref|NM_001036937.1| Arabidopsis thaliana beta-amylase AT5G45300 transcript variant AT5G45300.2 mRNA, complete cds Length = 2271 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 273 cctccacctcctccgccgcc 254
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ccctccacctcctccgccgc 199 |||||||||||||||||||| Sbjct: 109588 ccctccacctcctccgccgc 109607
>gb|DQ205538.1| Bos taurus prion protein (PRNP) and prion-like protein doppel (PRND) genes, complete cds; PRNT (PRNT) gene, exons 1 and 2; and putative protein gene, complete cds Length = 104027 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 cgcctccccgcccctccacctcctccgccgcc 200 ||||||||||||||| | |||||||| ||||| Sbjct: 49374 cgcctccccgcccctgcccctcctcctccgcc 49405
>ref|NM_187685.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3393 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 387 ctccacctcctccgccgcca 406
>ref|XM_467759.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1778 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ccgccacccgccttcgcgcc 172 |||||||||||||||||||| Sbjct: 943 ccgccacccgccttcgcgcc 962
>ref|XM_506969.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1734_E02.38 mRNA Length = 1828 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ccgccacccgccttcgcgcc 172 |||||||||||||||||||| Sbjct: 943 ccgccacccgccttcgcgcc 962
>ref|NM_197065.1| Oryza sativa (japonica cultivar-group) putative membrane-associated salt-inducible protein (OSJNBa0012L23.56), mRNA Length = 1737 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccgcccctccacctcctccg 195 |||||||||||||||||||| Sbjct: 456 ccgcccctccacctcctccg 475
>ref|NM_196191.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0032N04.22), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 13 cctccacctcctccgccgcc 32
>ref|XM_478011.1| Oryza sativa (japonica cultivar-group), mRNA Length = 600 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 533 cctccacctcctccgccgcc 514
>ref|NM_189998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1449 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 107 cctccacctcctccgccgcc 126
>gb|AF004877.1| Homo sapiens pro-alpha 2(I) collagen (COL1A2) gene, complete cds Length = 38682 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cgcctccccgcccctccacc 188 |||||||||||||||||||| Sbjct: 1776 cgcctccccgcccctccacc 1757
>ref|XM_581198.2| PREDICTED: Bos taurus similar to polycystin 1 isoform 2 precursor (LOC504986), partial mRNA Length = 4945 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cccgcccctccacctcctcc 194 |||||||||||||||||||| Sbjct: 4842 cccgcccctccacctcctcc 4861
>ref|XM_368161.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01083.4) partial mRNA Length = 1911 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 245 cctccacctcctccgccgcc 226
>ref|XM_368809.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00435.4) partial mRNA Length = 1629 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cccgcccctccacctcctcc 194 |||||||||||||||||||| Sbjct: 830 cccgcccctccacctcctcc 811
>gb|AY944236.1| Bos taurus prion preproprotein (PRNP) and prion-like protein doppel preproprotein (PRND) genes, complete cds; and RASSF2 gene, complete sequence Length = 207929 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 cgcctccccgcccctccacctcctccgccgcc 200 ||||||||||||||| | |||||||| ||||| Sbjct: 61642 cgcctccccgcccctgcccctcctcctccgcc 61673
>gb|AE007265.1| Sinorhizobium meliloti 1021 plasmid pSymA section 71 of 121 of the complete plasmid sequence Length = 10695 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ctcgcggtcgccgcggccatggcg 62 |||| ||||||||||||||||||| Sbjct: 3567 ctcgaggtcgccgcggccatggcg 3544
>gb|AC168270.1| Mus musculus BAC clone RP23-173C15 from chromosome 3, complete sequence Length = 216449 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ctagccaactacccagatct 31 |||||||||||||||||||| Sbjct: 60624 ctagccaactacccagatct 60605
>gb|AY190952.1| Drosophila virilis clone DVIF01_45_G15 (D1418) genomic sequence Length = 39016 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ctccacaccagcccaccgcc 123 |||||||||||||||||||| Sbjct: 35848 ctccacaccagcccaccgcc 35867
>gb|AC002074.2| Homo sapiens BAC clone GS1-56H18 from 7, complete sequence Length = 116660 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cgcctccccgcccctccacc 188 |||||||||||||||||||| Sbjct: 105266 cgcctccccgcccctccacc 105247
>gb|AC007335.7| Homo sapiens chromosome 16 clone RP11-165M2, complete sequence Length = 134482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 cttcctgttcctcttatcct 447 |||||||||||||||||||| Sbjct: 60291 cttcctgttcctcttatcct 60272
>gb|BT009437.1| Triticum aestivum clone wlmk4.pk0012.c2:fis, full insert mRNA sequence Length = 1966 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gcggtcgccgcggccatggc 61 |||||||||||||||||||| Sbjct: 1534 gcggtcgccgcggccatggc 1515
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 cgcgccagatctggcggaagacgc 360 ||||||||| |||||||||||||| Sbjct: 2416037 cgcgccagaactggcggaagacgc 2416060
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 36542 ctccacctcctccgccgcca 36523
>emb|AL513465.1|NCB13A5 Neurospora crassa DNA linkage group V BAC clone B13A5 Length = 72305 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 58699 cctccacctcctccgccgcc 58680
>emb|AL353822.2|NC15E6 Neurospora crassa DNA linkage group V Cosmid contig 15E6 Length = 61843 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 54955 cctccacctcctccgccgcc 54974
>gb|AC120746.5| Rattus norvegicus BAC CH230-25H1 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 234610 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 ccccttcctgttcctcttat 444 |||||||||||||||||||| Sbjct: 211798 ccccttcctgttcctcttat 211817
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 128959 cctccacctcctccgccgcc 128978
>gb|AC117806.11| Mus musculus chromosome 15, clone RP24-566D14, complete sequence Length = 194925 Score = 40.1 bits (20), Expect = 7.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 198 gccaaccccctg-cccttcatgtccttc 224 |||||||||||| ||||||||||||||| Sbjct: 89359 gccaaccccctgacccttcatgtccttc 89332
>gb|AC020766.10| Homo sapiens chromosome 16 clone RP11-70N16, complete sequence Length = 173595 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cttcctgttcctcttatcct 447 |||||||||||||||||||| Sbjct: 132175 cttcctgttcctcttatcct 132194
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ccgcccctccacctcctccg 195 |||||||||||||||||||| Sbjct: 139603 ccgcccctccacctcctccg 139584
>gb|AC084773.5| Homo sapiens chromosome 15, clone RP11-137H12, complete sequence Length = 167421 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ctctccatcctccacccgct 379 |||||||||||||||||||| Sbjct: 91402 ctctccatcctccacccgct 91383
>gb|AY128494.1| Drosophila melanogaster RH42690 full insert cDNA Length = 1853 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ccacctcctccgccgccaac 203 |||||||||||||||||||| Sbjct: 1443 ccacctcctccgccgccaac 1424
>gb|AC091211.3| Drosophila melanogaster 3L BAC RP98-26E12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194589 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 178328 ctccacctcctccgccgcca 178347
>gb|AC091228.3| Drosophila melanogaster 3L BAC RP98-10L9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156142 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 66057 ctccacctcctccgccgcca 66038
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ccacctcctccgccgccaac 203 |||||||||||||||||||| Sbjct: 90548 ccacctcctccgccgccaac 90567
>ref|NM_139801.2| Drosophila melanogaster CG10103-RA (CG10103), mRNA Length = 1628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 890 ctccacctcctccgccgcca 871
>ref|NM_134476.1| Drosophila melanogaster CG14218-RA (CG14218), mRNA Length = 1047 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 517 cctccacctcctccgccgcc 536
>ref|NM_132109.1| Drosophila melanogaster CG3198-RA (CG3198), mRNA Length = 2334 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ccacctcctccgccgccaac 203 |||||||||||||||||||| Sbjct: 1442 ccacctcctccgccgccaac 1423
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 103421 cctccacctcctccgccgcc 103402
>gb|AC087533.7| Homo sapiens, clone RP11-89A4, complete sequence Length = 154179 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ctcttccagctcctggctgg 472 |||||||||||||||||||| Sbjct: 101037 ctcttccagctcctggctgg 101018
>gb|AY012590.1| Drosophila virilis strain B42 no on or off transient A (nonA) gene, exon 2 and partial cds Length = 493 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 275 cctccacctcctccgccgcc 256
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccgcccctccacctcctccg 195 |||||||||||||||||||| Sbjct: 147558 ccgcccctccacctcctccg 147577
>gb|AY069431.1| Drosophila melanogaster LD14015 full length cDNA Length = 1645 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 890 ctccacctcctccgccgcca 871
>gb|AC125227.6| Mus musculus BAC clone RP23-42I13 from chromosome 7, complete sequence Length = 211209 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ccccttcctgttcctcttat 444 |||||||||||||||||||| Sbjct: 65677 ccccttcctgttcctcttat 65658
>gb|BT006482.1| Arabidopsis thaliana At5g45300 gene, complete cds Length = 2070 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 245 cctccacctcctccgccgcc 226
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 cgcccctccacctcctccgccgcc 200 ||||||||| |||||||||||||| Sbjct: 21734224 cgcccctcctcctcctccgccgcc 21734247
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ccgcccctccacctcctccg 195 |||||||||||||||||||| Sbjct: 17784483 ccgcccctccacctcctccg 17784464 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 11810898 cctccacctcctccgccgcc 11810917
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 6299933 cctccacctcctccgccgcc 6299952 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 3294114 cctccacctcctccgccgcc 3294095 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 1290472 cctccacctcctccgccgcc 1290491
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 17946941 ctccacctcctccgccgcca 17946922 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ggtcgccgcggccatggcga 63 |||||||||||||||||||| Sbjct: 5030848 ggtcgccgcggccatggcga 5030867
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 40722669 cctccacctcctccgccgcc 40722650
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 122287 cctccacctcctccgccgcc 122268
>gb|AC008507.11| Homo sapiens chromosome 19 clone CTC-448F2, complete sequence Length = 179005 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 cccttcctgttcctcttatccttc 449 ||||||||||||||||| |||||| Sbjct: 33613 cccttcctgttcctcttctccttc 33636
>gb|AC078863.15|AC078863 Mus musculus BAC RP23-406N7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 188008 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 26700 cctccacctcctccgccgcc 26681
>gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, complete sequence Length = 196085 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cctctccgccacccgccttc 167 |||||||||||||||||||| Sbjct: 28904 cctctccgccacccgccttc 28885
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 25315 cctccacctcctccgccgcc 25296
>ref|XM_216050.2| PREDICTED: Rattus norvegicus LIM homeobox protein 2 (predicted) (Lhx2_predicted), mRNA Length = 2429 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 110 cctccacctcctccgccgcc 129
>gb|AY186999.1| Drosophila virilis unc-5 (unc-5) gene, partial cds; and ap (ap), vlc (vlc), CG17337 (CG17337), and CG13533 (CG13533) genes, complete cds Length = 83253 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ctccacaccagcccaccgcc 123 |||||||||||||||||||| Sbjct: 45785 ctccacaccagcccaccgcc 45804
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 656180 cctccacctcctccgccgcc 656199
>gb|AF163764.1|AF163764 Bos taurus prion protein PrP (PrnP) gene, alternatively spliced, promoter, exons 1a, 1b, and 2, partial sequence Length = 6923 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 cgcctccccgcccctccacctcctccgccgcc 200 ||||||||||||||| | |||||||| ||||| Sbjct: 4276 cgcctccccgcccctgcccctcctcctccgcc 4307
>dbj|AP005448.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0404G11 Length = 167623 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 77548 cctccacctcctccgccgcc 77567
>dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0663H05 Length = 161938 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 32212 cctccacctcctccgccgcc 32231
>dbj|AP005884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0598D02 Length = 155238 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 61476 cctccacctcctccgccgcc 61495
>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0069P02 Length = 163033 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 10046 cctccacctcctccgccgcc 10027
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1734_E02 Length = 168566 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ccgccacccgccttcgcgcc 172 |||||||||||||||||||| Sbjct: 146167 ccgccacccgccttcgcgcc 146186
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1118_G04 Length = 134464 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ccgccacccgccttcgcgcc 172 |||||||||||||||||||| Sbjct: 36192 ccgccacccgccttcgcgcc 36211
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0071G09 Length = 169148 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 13247 ctccacctcctccgccgcca 13228
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 152130 ctccacctcctccgccgcca 152111
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ggtcgccgcggccatggcga 63 |||||||||||||||||||| Sbjct: 72962 ggtcgccgcggccatggcga 72981
>dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0563F09 Length = 174905 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 121346 cctccacctcctccgccgcc 121365
>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0011D16 Length = 177329 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 170427 cctccacctcctccgccgcc 170408
>dbj|AB020744.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9E15 Length = 62052 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 35338 cctccacctcctccgccgcc 35319
>dbj|AK117140.1| Arabidopsis thaliana At5g45300 mRNA for putative beta-amylase, complete cds, clone: RAFL16-68-D16 Length = 2272 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 268 cctccacctcctccgccgcc 249
>dbj|AK120714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002A11, full insert sequence Length = 2214 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 199 cctccacctcctccgccgcc 218
>dbj|AK104976.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-H07, full insert sequence Length = 2293 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 24 cctccacctcctccgccgcc 43
>dbj|AK098873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C18, full insert sequence Length = 1778 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ccgccacccgccttcgcgcc 172 |||||||||||||||||||| Sbjct: 944 ccgccacccgccttcgcgcc 963
>dbj|AK072143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F03, full insert sequence Length = 3267 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 213 ctccacctcctccgccgcca 232
>dbj|AK071363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092F04, full insert sequence Length = 2303 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ggtcgccgcggccatggcga 63 |||||||||||||||||||| Sbjct: 1945 ggtcgccgcggccatggcga 1964
>dbj|AK071210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085L01, full insert sequence Length = 737 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 cgcccctccacctcctccgccgcc 200 ||||||||| |||||||||||||| Sbjct: 470 cgcccctcctcctcctccgccgcc 493
>dbj|AK069060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005G23, full insert sequence Length = 2323 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 53 cctccacctcctccgccgcc 72
>dbj|AK069047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C11, full insert sequence Length = 996 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 cgcccctccacctcctccgccgcc 200 ||||||||| |||||||||||||| Sbjct: 474 cgcccctcctcctcctccgccgcc 497
>dbj|AK066948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089A07, full insert sequence Length = 1335 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ccctccacctcctccgccgc 199 |||||||||||||||||||| Sbjct: 103 ccctccacctcctccgccgc 122
>dbj|AK065536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028P07, full insert sequence Length = 1946 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 370 cctccacctcctccgccgcc 389
>dbj|AK061968.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H01, full insert sequence Length = 1828 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ccgccacccgccttcgcgcc 172 |||||||||||||||||||| Sbjct: 943 ccgccacccgccttcgcgcc 962
>gb|AY106900.1| Zea mays PCO142538 mRNA sequence Length = 1029 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cgccgcggccatggcgaagg 66 |||||||||||||||||||| Sbjct: 570 cgccgcggccatggcgaagg 551
>tpe|BN000291.1|BTA000291 TPA: TPA_exp: Bos taurus prp gene for prion protein Length = 78056 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 cgcctccccgcccctccacctcctccgccgcc 200 ||||||||||||||| | |||||||| ||||| Sbjct: 49376 cgcctccccgcccctgcccctcctcctccgcc 49407
>gb|AE003561.3| Drosophila melanogaster chromosome 3L, section 24 of 83 of the complete sequence Length = 274289 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ctccacctcctccgccgcca 201 |||||||||||||||||||| Sbjct: 105916 ctccacctcctccgccgcca 105935
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 228053 cctccacctcctccgccgcc 228034
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ccacctcctccgccgccaac 203 |||||||||||||||||||| Sbjct: 132435 ccacctcctccgccgccaac 132454
>gb|AC171642.3| Rhesus Macaque BAC CH250-405K12 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 138125 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cgcctccccgcccctccacc 188 |||||||||||||||||||| Sbjct: 39550 cgcctccccgcccctccacc 39569
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ccgcccctccacctcctccg 195 |||||||||||||||||||| Sbjct: 17793736 ccgcccctccacctcctccg 17793717 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 11818238 cctccacctcctccgccgcc 11818257
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 cgcccctccacctcctccgccgcc 200 ||||||||| |||||||||||||| Sbjct: 21662569 cgcccctcctcctcctccgccgcc 21662592
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 cgcccctccacctcctccgccgcc 200 ||||||||| |||||||||||||| Sbjct: 78327 cgcccctcctcctcctccgccgcc 78304
>emb|AJ298878.1|BTA298878 Bos taurus prp gene for prion protein Length = 78056 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 cgcctccccgcccctccacctcctccgccgcc 200 ||||||||||||||| | |||||||| ||||| Sbjct: 49376 cgcctccccgcccctgcccctcctcctccgcc 49407
>emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chromosome 2, complete sequence Length = 198573 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 180553 cctccacctcctccgccgcc 180572
>emb|AL139193.4|CNS01DXA Human chromosome 14 DNA sequence BAC R-661G16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 162691 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gtctcttccagctcctggct 470 |||||||||||||||||||| Sbjct: 121313 gtctcttccagctcctggct 121294
>emb|Z14132.1|MMASM1G M.musculus (balb-c) gene for sphingomyelin phosphodiesterase Length = 4775 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ccccttcctgttcctcttat 444 |||||||||||||||||||| Sbjct: 628 ccccttcctgttcctcttat 609
>gb|AF494280.1| Homo sapiens GC-binding transcription factor Sp3 gene, partial cds Length = 9596 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cctctccgccacccgccttc 167 |||||||||||||||||||| Sbjct: 1095 cctctccgccacccgccttc 1114
>dbj|AB004317.1| Homo sapiens DNA for human type I collagen alpha 2 chain, partial cds Length = 7800 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cgcctccccgcccctccacc 188 |||||||||||||||||||| Sbjct: 3122 cgcctccccgcccctccacc 3103
>dbj|D26150.1|BOVPRPA Bovine PrP gene for prion protein, promoter region (exon 1 and exon 2) Length = 3404 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 cgcctccccgcccctccacctcctccgccgcc 200 ||||||||||||||| | |||||||| ||||| Sbjct: 749 cgcctccccgcccctgcccctcctcctccgcc 780
>dbj|AK090434.1| Homo sapiens mRNA for FLJ00351 protein Length = 5349 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 atctctccggccccttcctg 434 |||||||||||||||||||| Sbjct: 4496 atctctccggccccttcctg 4477
>emb|AJ315596.1|BNA315596 Brassica napus microsatellite, clone Na10-B10 Length = 509 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctccacctcctccgccgcc 200 |||||||||||||||||||| Sbjct: 209 cctccacctcctccgccgcc 190 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,153,038 Number of Sequences: 3902068 Number of extensions: 4153038 Number of successful extensions: 117314 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 113337 Number of HSP's gapped (non-prelim): 3978 length of query: 554 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 531 effective length of database: 17,143,297,704 effective search space: 9103091080824 effective search space used: 9103091080824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
