ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart20f09 |
|---|---|
| Clone Library Name | barley_pub |
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 37.4 bits (85), Expect = 0.031 Identities = 25/100 (25%), Positives = 45/100 (45%) Frame = +2 Query: 146 TKVTKGGASTALYTAPLSAGRPLVFDLSAPSITTPCSGQTTTVTLSANSTDGSNPLSPVS 325 + V++ +ST+ ++ +S D+S+ + S + ++S +++ S+ S VS Sbjct: 177 SSVSQSASSTSDVSSSVSQSSSSASDVSSSVSQSSSSASDVSSSVSQSASSTSDVSSSVS 236 Query: 326 FXXXXXXXXXPSGSVGVSGLARSGSSFPAQVSSTQKVANS 445 SGS VS + S SSFP SS + S Sbjct: 237 QSASSTSGVSSSGSQSVSSASGSSSSFPQSTSSASTASGS 276
>HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant protein 1| precursor Length = 1802 Score = 35.0 bits (79), Expect = 0.15 Identities = 26/98 (26%), Positives = 44/98 (44%) Frame = +2 Query: 173 TALYTAPLSAGRPLVFDLSAPSITTPCSGQTTTVTLSANSTDGSNPLSPVSFXXXXXXXX 352 T+ +AP++ SAP+ + + +V ++ +ST S+P +P + Sbjct: 617 TSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAI--SSTYTS 674 Query: 353 XPSGSVGVSGLARSGSSFPAQVSSTQKVANSFALCLPS 466 PS V VS S S PA +SST + S + + S Sbjct: 675 SPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 712 Score = 35.0 bits (79), Expect = 0.15 Identities = 26/98 (26%), Positives = 44/98 (44%) Frame = +2 Query: 173 TALYTAPLSAGRPLVFDLSAPSITTPCSGQTTTVTLSANSTDGSNPLSPVSFXXXXXXXX 352 T+ +AP++ SAP+ + + + ++ +ST S+P +PV+ Sbjct: 533 TSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAI--SSTYTS 590 Query: 353 XPSGSVGVSGLARSGSSFPAQVSSTQKVANSFALCLPS 466 PS V VS S S PA +SST + S + + S Sbjct: 591 SPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 628 Score = 33.5 bits (75), Expect = 0.45 Identities = 24/98 (24%), Positives = 42/98 (42%) Frame = +2 Query: 173 TALYTAPLSAGRPLVFDLSAPSITTPCSGQTTTVTLSANSTDGSNPLSPVSFXXXXXXXX 352 T+ +AP++ SAP+ + + + ++ +ST S+P +P + Sbjct: 505 TSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAI--SSTYTS 562 Query: 353 XPSGSVGVSGLARSGSSFPAQVSSTQKVANSFALCLPS 466 PS V VS S S P +SST + S + + S Sbjct: 563 SPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSS 600
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 34.7 bits (78), Expect = 0.20 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 4/117 (3%) Frame = +2 Query: 143 LTKVTKGGASTALYTAPLSAGRPLVFDLSAPSIT----TPCSGQTTTVTLSANSTDGSNP 310 L T A+++ ++ +S+ PL S + T T S Q T +L +ST S P Sbjct: 232 LNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTP 291 Query: 311 LSPVSFXXXXXXXXXPSGSVGVSGLARSGSSFPAQVSSTQKVANSFALCLPSDGVGA 481 LS + P SV + + S+ + VSS + P V + Sbjct: 292 LSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNS 348 Score = 29.6 bits (65), Expect = 6.4 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 5/117 (4%) Frame = +2 Query: 146 TKVTKGGASTALYTAPLSA-----GRPLVFDLSAPSITTPCSGQTTTVTLSANSTDGSNP 310 T +T ++TA +A ++ + S PS +TP S +T SA+ST P Sbjct: 253 TPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPS-STPLSSANSTTATSASST----P 307 Query: 311 LSPVSFXXXXXXXXXPSGSVGVSGLARSGSSFPAQVSSTQKVANSFALCLPSDGVGA 481 L+ V+ P SV + + S+ +SS + A P V + Sbjct: 308 LTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNS 364
>DOS_HUMAN (Q8N350) Protein Dos| Length = 725 Score = 32.7 bits (73), Expect = 0.76 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 4/71 (5%) Frame = -2 Query: 558 PSESSVVMAGRSAGGARKNGPPPKMAAPTPSLGRQSANELATFCVLDT----WAGNEEPE 391 P E + R+ P P +A+P P+LGR A E A D+ AG+ PE Sbjct: 372 PQEDFIQYIARAGDAVAFPHPRPFLASPPPALGRLEAAEAAGGASPDSPPERGAGSAGPE 431 Query: 390 RASPETPTEPE 358 + P P EP+ Sbjct: 432 QQQP--PLEPD 440
>MDR3_CAEEL (P34713) Multidrug resistance protein 3 (EC 3.6.3.44) (P-glycoprotein| C) Length = 1268 Score = 32.7 bits (73), Expect = 0.76 Identities = 22/78 (28%), Positives = 35/78 (44%) Frame = -2 Query: 234 GAERSKTSGRPALRGAV*SAVEAPPLVTLVSRGLPTVATVEAASRRSTRTGLDGNILGLC 55 GA + SG R A+ A+ P + L+ + ++ S + + LD LG Sbjct: 1162 GASGGRLSGGQKQRVAIARAIVRDPKILLLDEA---TSALDTESEKIVQEALDKARLGRT 1218 Query: 54 CVVLCWKLGIEINADAVI 1 CVV+ +L NAD +I Sbjct: 1219 CVVIAHRLSTIQNADKII 1236
>MTSS1_MOUSE (Q8R1S4) Metastasis suppressor protein 1 (Missing in metastasis| protein) Length = 759 Score = 32.3 bits (72), Expect = 0.99 Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 18/125 (14%) Frame = +2 Query: 227 SAPSITTPCSGQTTTVTLSANSTD----GSNPLSPVSFXXXXXXXXXPSGSVGVSGLARS 394 S+PS T + S NS+D GS+ SP S V +S ++ Sbjct: 265 SSPSTTMSRKSSVCSSLNSVNSSDSRSSGSHSHSPSSHYRYRSSNLAQQAPVRLSSVSSH 324 Query: 395 GSSF------------PAQVSSTQKVANSFALCLPSDGVGAAIFGGGPFFLAPPADR--P 532 S F P + +++N F+ C S A G GPF PA R P Sbjct: 325 DSGFISQDAFQSKSPSPMPPEAANQLSNGFSHCSLSSESHAGPVGAGPFPHCLPASRLLP 384 Query: 533 AITTL 547 +T++ Sbjct: 385 RVTSV 389
>FMP1_PSEAE (P17838) Fimbrial protein precursor (Pilin) (Strain P1)| Length = 157 Score = 32.3 bits (72), Expect = 0.99 Identities = 21/54 (38%), Positives = 28/54 (51%) Frame = +2 Query: 143 LTKVTKGGASTALYTAPLSAGRPLVFDLSAPSITTPCSGQTTTVTLSANSTDGS 304 + KVT GG TA S G +V + A + TP G+T T+TL N+ GS Sbjct: 85 VAKVTTGG------TAAASGGCTIVATMKASDVATPLRGKTLTLTL-GNADKGS 131
>BLNK_HUMAN (Q8WV28) B-cell linker protein (Cytoplasmic adapter protein)| (B-cell adapter containing SH2 domain protein) (B-cell adapter containing Src homology 2 domain protein) (Src homology 2 domain-containing leukocyte protein of 65 kDa) (SLP-65) Length = 456 Score = 32.3 bits (72), Expect = 0.99 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -2 Query: 567 SGTPSESSVVMAGRSAGGARKNGPPPKMAAPTPSLGRQSANELAT 433 S TP+ +GR++G PPP +P P G++ L T Sbjct: 214 SSTPASPPGTASGRNSGAWETKSPPPAAPSPLPRAGKKPTTPLKT 258
>IF2_XANOR (Q5GXU9) Translation initiation factor IF-2| Length = 906 Score = 32.0 bits (71), Expect = 1.3 Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 2/123 (1%) Frame = -2 Query: 555 SESSVVMAGRSAGGARKNGPPPKMAAPTPSLGRQSAN--ELATFCVLDTWAGNEEPERAS 382 +E+ A +A A P P AAPTPS +A + + G P + Sbjct: 169 AEAERKAAEEAAAAASAPAPAPVAAAPTPSAAAPAARAPSSPSSAPRPSRPGGASP-ASR 227 Query: 381 PETPTEPEGXXXXXXXXANETGDSGLLPSVELAESVTVVVCPLHGVVMDGAERSKTSGRP 202 P TP P+ G ++ VE ++ LH D A RS G+P Sbjct: 228 PSTPARPDDRNNAAKHKTR--GSHVMVAGVEDDDATKRFAGQLHLSAADRARRSNVRGKP 285 Query: 201 ALR 193 R Sbjct: 286 TGR 288
>PTHB_ECOLI (P56580) Glucitol/sorbitol-specific phosphotransferase enzyme IIB| component (EC 2.7.1.69) (PTS system glucitol/sorbitol-specific EIIB component) (EII-Gut) Length = 319 Score = 32.0 bits (71), Expect = 1.3 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 5/110 (4%) Frame = -2 Query: 576 GWRSGTPSESSVVMAGRSAGGARKNGPPPKMAAPTPSL-GRQSANELATFCVLDTWAGNE 400 G++ G P+E+ + +A GG + G PK PT ++ + LA + V D + Sbjct: 53 GFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGV 112 Query: 399 EPERASPETPTEPE----GXXXXXXXXANETGDSGLLPSVELAESVTVVV 262 + E + P+ G E D GLL V + TV V Sbjct: 113 KEENITVVGDATPQPSSVGRDYDTSKKITEQSD-GLLAKVGMGMGSTVAV 161
>PQE1_CAEEL (Q10124) Putative RNA exonuclease pqe-1 (PolyQ enhancer protein 1)| Length = 1647 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +1 Query: 43 QHNTTQAQNVAVQASP-GAPPARRLHGGDRRQASAHQGNQGR 165 Q +T QA N+ A+ G PP + + G R Q +AHQ G+ Sbjct: 115 QMSTQQAANLRKNAAAAGTPPKQAMQGASREQGNAHQPTAGQ 156
>COAT_SMSV4 (P36285) Capsid protein precursor (Coat protein)| Length = 703 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +2 Query: 311 LSPVSFXXXXXXXXXPSGSVGVSGLARSGSSFPAQVSSTQKVANSFALCLPSDGVGAA 484 L P + G V L++ GSS+ + ST V+NSF SDG G+A Sbjct: 102 LPPFTITGTHHYYATKPGEVVSGILSKLGSSWDPSLRSTADVSNSFTFRAESDGPGSA 159
>ITAD_RAT (Q9QYE7) Integrin alpha-D precursor (CD11d antigen)| Length = 1161 Score = 31.2 bits (69), Expect = 2.2 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Frame = +2 Query: 386 ARSGSSFPAQVSSTQKVANSFALCLPSDG-----VGAAIFGGGPFFLAPPADRPAITTLL 550 +RS SSF ++S F+ L SDG VG+ + GG F L PP RP + Sbjct: 342 SRSSSSFQHEMSQ-----EGFSSALTSDGPVLGAVGSFSWSGGAF-LYPPNTRPTFINMS 395 Query: 551 SDGVPLR 571 + V +R Sbjct: 396 QENVDMR 402
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 31.2 bits (69), Expect = 2.2 Identities = 35/136 (25%), Positives = 49/136 (36%), Gaps = 9/136 (6%) Frame = +2 Query: 197 SAGRPLVFDLSAP---SITTPCSGQTTTVTLSANSTDGSNPLSPV-SFXXXXXXXXXPSG 364 S G P L AP TTP + TTT L ++ ++P+ S P+ Sbjct: 754 SMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAF 813 Query: 365 SVGVSGLARSGSSFPAQVSSTQKVANSFALCLPSDGVGAAIFG---GGPFFLAPPADRPA 535 G++ + S SS S+ + F P AA F G F P P Sbjct: 814 GFGINSV--SSSSVSTTTSTATAASQPFLFGAPQ--ASAASFTPAMGSIFQFGKPPALPT 869 Query: 536 ITTL--LSDGVPLRQP 577 TT+ S +P P Sbjct: 870 TTTVTTFSQSLPTAVP 885
>UNG_PRVKA (P52507) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 316 Score = 30.4 bits (67), Expect = 3.8 Identities = 23/62 (37%), Positives = 27/62 (43%) Frame = -2 Query: 564 GTPSESSVVMAGRSAGGARKNGPPPKMAAPTPSLGRQSANELATFCVLDTWAGNEEPERA 385 GTP+ S A +A GA + PPP APT A F V +W EPE A Sbjct: 63 GTPAAS----AATTATGADASAPPPDPGAPTWDA------FAAEFDVAPSWRALLEPEIA 112 Query: 384 SP 379 P Sbjct: 113 KP 114
>SYNC2_ARATH (Q9SW95) Asparaginyl-tRNA synthetase, cytoplasmic 2 (EC 6.1.1.22)| (Asparagine--tRNA ligase 2) (AsnRS 2) Length = 638 Score = 30.4 bits (67), Expect = 3.8 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 5/41 (12%) Frame = -2 Query: 543 VVMAG--RSAGGARKNGPPPKM---AAPTPSLGRQSANELA 436 VV+ G +SA +KN PPP + AAP+PS G A+ A Sbjct: 50 VVIGGWVKSARAVKKNSPPPPLPVVAAPSPSSGGDQAHTTA 90
>DIS1_SCHPO (Q09933) Phosphoprotein p93| Length = 882 Score = 30.4 bits (67), Expect = 3.8 Identities = 33/106 (31%), Positives = 43/106 (40%) Frame = +2 Query: 128 VGKPLLTKVTKGGASTALYTAPLSAGRPLVFDLSAPSITTPCSGQTTTVTLSANSTDGSN 307 V PL T K A T +PL + P L+ S++T S T T S S Sbjct: 549 VASPLKTSPVKL-AVTPQAPSPLPSSNPSQASLTEESLSTR-SSPTKPSTTSLRSQ---- 602 Query: 308 PLSPVSFXXXXXXXXXPSGSVGVSGLARSGSSFPAQVSSTQKVANS 445 S V+ S S GVS A S SFP+ S ++K+ S Sbjct: 603 --SLVNRFASSTLKAPSSSSKGVSNAASSKQSFPSSPSISKKLETS 646
>PME17_MOUSE (Q60696) Melanocyte protein Pmel 17 precursor (Silver locus| protein) Length = 626 Score = 30.0 bits (66), Expect = 4.9 Identities = 16/69 (23%), Positives = 26/69 (37%) Frame = -2 Query: 477 PTPSLGRQSANELATFCVLDTWAGNEEPERASPETPTEPEGXXXXXXXXANETGDSGLLP 298 PT + ++ ++ T V+DT + TPT P G S LLP Sbjct: 354 PTTEVTATTSEQMLTSAVIDTTLAEVSTTEGTGTTPTRPSGTTVAQATTTEGPDASPLLP 413 Query: 297 SVELAESVT 271 + S++ Sbjct: 414 TQSSTGSIS 422
>LEU3_SYNEL (P59029) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 361 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -2 Query: 321 TGDSGLLPSVELAESVTVVVCPLHGVVMDGAERSKTS 211 TG G+LPS L ES + P+HG D A + K + Sbjct: 260 TGSIGMLPSASLGESGPALFEPVHGSAPDIAGQDKAN 296
>LEU3_METCA (Q606F4) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 360 Score = 30.0 bits (66), Expect = 4.9 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = -2 Query: 321 TGDSGLLPSVELAESVTVVVCPLHGVVMDGAER 223 TG G+LPS LAES + P+HG D A R Sbjct: 258 TGSIGMLPSASLAESGKGMYEPIHGSAPDIAGR 290
>DACT1_HUMAN (Q9NYF0) Dapper homolog 1 (hDPR1) (Heptacellular carcinoma novel| gene 3 protein) Length = 836 Score = 29.6 bits (65), Expect = 6.4 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Frame = +1 Query: 16 IDFDSKLPTQHNTTQAQNVAVQASPGAPPARRLHGGDRRQA---SAHQGNQGRRLHGALH 186 +DF S+ +Q + +A V Q PG P+ RLH G R ++ ++G L G + Sbjct: 538 LDFKSEGSSQ-SLEEAHLVKAQFIPGQQPSVRLHRGHRNMGVVKNSSLKHRGPALQGLEN 596 Query: 187 GAPQRRPPT 213 G P R T Sbjct: 597 GLPTVREKT 605
>IF2_BURPS (Q63TP8) Translation initiation factor IF-2| Length = 975 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = -2 Query: 570 RSGTPSESSVVMAGRSAGGAR----KNGPPPKMAAPTPSLGRQSANEL 439 +SGT S VV+AG + G R +NG P K A P+ + Q +E+ Sbjct: 673 QSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGPSIPVEIQGLSEV 720
>IF2_BURP1 (Q3JSY9) Translation initiation factor IF-2| Length = 975 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = -2 Query: 570 RSGTPSESSVVMAGRSAGGAR----KNGPPPKMAAPTPSLGRQSANEL 439 +SGT S VV+AG + G R +NG P K A P+ + Q +E+ Sbjct: 673 QSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGPSIPVEIQGLSEV 720
>IF2_BURMA (Q62KK9) Translation initiation factor IF-2| Length = 975 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = -2 Query: 570 RSGTPSESSVVMAGRSAGGAR----KNGPPPKMAAPTPSLGRQSANEL 439 +SGT S VV+AG + G R +NG P K A P+ + Q +E+ Sbjct: 673 QSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGPSIPVEIQGLSEV 720
>CFTR_XENLA (P26363) Cystic fibrosis transmembrane conductance regulator (CFTR)| (cAMP-dependent chloride channel) (ATP-binding cassette transporter sub-family C member 7) Length = 1485 Score = 29.6 bits (65), Expect = 6.4 Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = +2 Query: 248 PCSGQTTTVTLSANSTDGSNP-LSPVSFXXXXXXXXXPSGSVGVSGLARSGSS 403 P GQ T LSAN DG N L +SF P VG+ G SG S Sbjct: 1208 PSGGQMTVKNLSANYIDGGNTVLENISF------SLSPGQRVGLLGRTGSGKS 1254
>CFTR_PAPAN (Q9TSP5) Cystic fibrosis transmembrane conductance regulator (CFTR)| (cAMP-dependent chloride channel) (ATP-binding cassette transporter sub-family C member 7) Length = 1481 Score = 29.6 bits (65), Expect = 6.4 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +2 Query: 248 PCSGQTTTVTLSANSTDGSNP-LSPVSFXXXXXXXXXPSGSVGVSGLARSGSS 403 P GQ T L+A T+G NP L +SF P VG+ G SG S Sbjct: 1206 PSGGQMTVKDLTAKYTEGGNPILENISF------SISPGQRVGLLGRTGSGKS 1252
>CFTR_MACNE (Q9TUQ2) Cystic fibrosis transmembrane conductance regulator (CFTR)| (cAMP-dependent chloride channel) (ATP-binding cassette transporter sub-family C member 7) Length = 1481 Score = 29.6 bits (65), Expect = 6.4 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +2 Query: 248 PCSGQTTTVTLSANSTDGSNP-LSPVSFXXXXXXXXXPSGSVGVSGLARSGSS 403 P GQ T L+A T+G NP L +SF P VG+ G SG S Sbjct: 1206 PSGGQMTVKDLTAKYTEGGNPILENISF------SISPGQRVGLLGRTGSGKS 1252
>CFTR_MACMU (Q00553) Cystic fibrosis transmembrane conductance regulator (CFTR)| (cAMP-dependent chloride channel) (ATP-binding cassette transporter sub-family C member 7) Length = 1481 Score = 29.6 bits (65), Expect = 6.4 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +2 Query: 248 PCSGQTTTVTLSANSTDGSNP-LSPVSFXXXXXXXXXPSGSVGVSGLARSGSS 403 P GQ T L+A T+G NP L +SF P VG+ G SG S Sbjct: 1206 PSGGQMTVKDLTAKYTEGGNPILENISF------SISPGQRVGLLGRTGSGKS 1252
>CFTR_MACFU (Q7JII7) Cystic fibrosis transmembrane conductance regulator (CFTR)| (cAMP-dependent chloride channel) (ATP-binding cassette transporter sub-family C member 7) Length = 1481 Score = 29.6 bits (65), Expect = 6.4 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +2 Query: 248 PCSGQTTTVTLSANSTDGSNP-LSPVSFXXXXXXXXXPSGSVGVSGLARSGSS 403 P GQ T L+A T+G NP L +SF P VG+ G SG S Sbjct: 1206 PSGGQMTVKDLTAKYTEGGNPILENISF------SISPGQRVGLLGRTGSGKS 1252
>CFTR_MACFA (Q7JII8) Cystic fibrosis transmembrane conductance regulator (CFTR)| (cAMP-dependent chloride channel) (ATP-binding cassette transporter sub-family C member 7) Length = 1481 Score = 29.6 bits (65), Expect = 6.4 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +2 Query: 248 PCSGQTTTVTLSANSTDGSNP-LSPVSFXXXXXXXXXPSGSVGVSGLARSGSS 403 P GQ T L+A T+G NP L +SF P VG+ G SG S Sbjct: 1206 PSGGQMTVKDLTAKYTEGGNPILENISF------SISPGQRVGLLGRTGSGKS 1252
>SIX5_HUMAN (Q8N196) Homeobox protein SIX5 (DM locus-associated homeodomain| protein) Length = 739 Score = 29.6 bits (65), Expect = 6.4 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Frame = -2 Query: 567 SGTPSE----SSVVMAGRSAGGARKNGP---PPKMAAPTPSLGRQSANELATFCVLDTWA 409 SG+P+ V++ G + G A GP AP P Q A+E T VLD Sbjct: 331 SGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQT 390 Query: 408 GNEEPERASPETP 370 G E A E P Sbjct: 391 GEVRLEEAQSEAP 403
>MARCS_MOUSE (P26645) Myristoylated alanine-rich C-kinase substrate (MARCKS)| Length = 308 Score = 29.3 bits (64), Expect = 8.4 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = -2 Query: 531 GRSAGGARKNGPPPKMAAPTPSLGRQSANELATFCVLDTWAGNE--EPERASPETPTEPE 358 G A GA G + AA G + E A + AG E E E A PE P +PE Sbjct: 173 GAEAEGATAEGAKDEAAAAAGGEGAAAPGEQAGGAGAEGAAGGEPREAEAAEPEQPEQPE 232
>LEU31_ARATH (Q9SA14) 3-isopropylmalate dehydrogenase 1, chloroplast precursor| (EC 1.1.1.85) (Beta-IPM dehydrogenase 1) (IMDH 1) (3-IPM-DH 1) Length = 406 Score = 29.3 bits (64), Expect = 8.4 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -2 Query: 321 TGDSGLLPSVELAESVTVVVCPLHGVVMDGAERSKTS 211 TG G+LPS L ES + P+HG D A + K + Sbjct: 299 TGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKAN 335
>CRF1_ASPFU (Q8J0P4) Probable glycosidase crf1 precursor (EC 3.2.-.-) (Crh-like| protein) (Allergen Asp f 9) Length = 395 Score = 29.3 bits (64), Expect = 8.4 Identities = 27/117 (23%), Positives = 46/117 (39%) Frame = +2 Query: 146 TKVTKGGASTALYTAPLSAGRPLVFDLSAPSITTPCSGQTTTVTLSANSTDGSNPLSPVS 325 + VT STA + S+ P L+ + TP T++ +NS+ + P + Sbjct: 275 SSVTSSTTSTASSASSTSSKTPSTSTLATSTKATPTPSGTSS---GSNSSSSAEPTTTGG 331 Query: 326 FXXXXXXXXXPSGSVGVSGLARSGSSFPAQVSSTQKVANSFALCLPSDGVGAAIFGG 496 SGS G + +GSS A S+T +++ A + A+ G Sbjct: 332 TGSSNTGSGSGSGS-GSGSSSSTGSSTSAGASATPELSQGAAGSIKGSVTACALVFG 387
>LEU33_ARATH (Q9FMT1) 3-isopropylmalate dehydrogenase 3, chloroplast precursor| (EC 1.1.1.85) (Beta-IPM dehydrogenase 3) (IMDH 3) (3-IPM-DH 3) Length = 409 Score = 29.3 bits (64), Expect = 8.4 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -2 Query: 321 TGDSGLLPSVELAESVTVVVCPLHGVVMDGAERSKTS 211 TG G+LPS L ES + P+HG D A + K + Sbjct: 302 TGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKAN 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,096,914 Number of Sequences: 219361 Number of extensions: 1149490 Number of successful extensions: 5366 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4925 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5352 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
