Clone Name | bart20f06 |
---|---|
Clone Library Name | barley_pub |
>HAG1_SCHPO (Q8X1T0) UPF0326 protein hag1| Length = 201 Score = 33.9 bits (76), Expect = 0.35 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3 Query: 6 NLLTNNCNHFSNEVVKFLVGSTIPSYI 86 +LL NCNHF+N L GS IPS++ Sbjct: 99 SLLERNCNHFTNAAAIELTGSPIPSFL 125
>CG146_ARATH (Q93VG8) UPF0326 protein At4g17486| Length = 224 Score = 32.3 bits (72), Expect = 1.0 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 Query: 6 NLLTNNCNHFSNEVVKFLVGSTIPSYI 86 +L+ NCNHF+ EV L G IP +I Sbjct: 119 HLIAKNCNHFTEEVCLQLTGKPIPGWI 145
>CG146_PONPY (Q5R456) UPF0326 protein CGI-146 homolog| Length = 194 Score = 30.8 bits (68), Expect = 3.0 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 6 NLLTNNCNHFSNEVVKFLVGSTIPSYI 86 +L+ NCNHFS+ + + L G IP +I Sbjct: 102 HLMHKNCNHFSSALSEILCGKEIPRWI 128
>CG146_MOUSE (Q9D291) UPF0326 protein CGI-146 homolog| Length = 194 Score = 30.8 bits (68), Expect = 3.0 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 6 NLLTNNCNHFSNEVVKFLVGSTIPSYI 86 +L+ NCNHFS+ + + L G IP +I Sbjct: 102 HLMHKNCNHFSSALSEILCGKEIPRWI 128
>CG146_HUMAN (Q9BSY9) UPF0326 protein CGI-146| Length = 194 Score = 30.8 bits (68), Expect = 3.0 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 6 NLLTNNCNHFSNEVVKFLVGSTIPSYI 86 +L+ NCNHFS+ + + L G IP +I Sbjct: 102 HLMHKNCNHFSSALSEILCGKEIPRWI 128
>ACCN4_HUMAN (Q96FT7) Amiloride-sensitive cation channel 4 (Amiloride-sensitive| cation channel 4, pituitary) (Acid-sensing ion channel 4) Length = 647 Score = 30.0 bits (66), Expect = 5.0 Identities = 20/56 (35%), Positives = 25/56 (44%) Frame = +2 Query: 188 ASTIRACSCSSGADTAFHEKHSE*NCKGCDGEQ*QRDHPACSATHTQGSGSGADTS 355 A T +GAD H++ E K +Q QR H C A GSGS + TS Sbjct: 25 AGTHAGADSCAGADKGSHKETIEERDKRQQRQQRQRQHQGCGAA---GSGSDSPTS 77
>PCDG5_HUMAN (Q9Y5G8) Protocadherin gamma A5 precursor (PCDH-gamma-A5)| Length = 931 Score = 29.3 bits (64), Expect = 8.6 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +3 Query: 30 HFSNEVVKFLVGSTIPSYILDQPKEAMKSPIGALIMPMIQGLETTL 167 HFS +VV G P +L+QP + K + L++ + G + L Sbjct: 177 HFSLDVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVL 222
>CPGL1_MOUSE (Q9D1A2) Cytosolic nonspecific dipeptidase (Glutamate| carboxypeptidase-like protein 1) (CNDP dipeptidase 2) Length = 475 Score = 29.3 bits (64), Expect = 8.6 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = -3 Query: 194 WRLYXXXXXXXCLQPLNHRHYQCADRALHRLLGLVEDVARNRGT 63 +++Y + NH HYQ RAL + G+ D+ R G+ Sbjct: 374 FKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTREGGS 417 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,406,296 Number of Sequences: 219361 Number of extensions: 1258629 Number of successful extensions: 3973 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3832 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3968 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)