ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart20e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, comp... 46 0.019
2gb|U36790.1|OCU36790 Oryctolagus cuniculus putative chloride cha... 42 0.30
3gb|U36789.1|OCU36789 Oryctolagus cuniculus putative chloride cha... 42 0.30
4gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipie... 40 1.2
5ref|XM_426303.1| PREDICTED: Gallus gallus LOC428747 (LOC428747),... 40 1.2
6gb|AY452788.1| uncultured foraminiferan clone McM5 SSU ribosomal... 40 1.2
7gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, com... 40 1.2
8emb|AJ307768.1|NSP307768 Nemogullmia sp. A330 partial 18S rRNA g... 40 1.2
9ref|XM_482490.1| Oryza sativa (japonica cultivar-group), mRNA 38 4.6
10ref|XM_468448.1| Oryza sativa (japonica cultivar-group), mRNA 38 4.6
11ref|NM_190668.1| Oryza sativa (japonica cultivar-group), predic... 38 4.6
12ref|NM_190978.1| Oryza sativa (japonica cultivar-group), predic... 38 4.6
13gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome... 38 4.6
14emb|AL645703.18| Human DNA sequence from clone RP3-484O5 on chro... 38 4.6
15emb|AL162391.15| Human DNA sequence from clone RP11-438L3 on chr... 38 4.6
16emb|AL031716.8|HS360B4 Human DNA sequence from clone LA16c-360B4... 38 4.6
17emb|X63281.1|RNNMYC R.norvegicus N-myc gene 38 4.6
18gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8 38 4.6
19gb|DQ384260.1| Anomochloa marantoidea clone AmTS2-dupl tasselsee... 38 4.6
20gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 38 4.6
21emb|BX296548.20| Pig DNA sequence from clone PigE-193I9, complet... 38 4.6
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
23dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
26dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
27dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
28dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
29dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
30dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 38 4.6
31dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
32dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
33dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
34dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
35dbj|AP005494.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
36dbj|AK107033.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.6
37dbj|AK103477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.6
38dbj|AK071291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.6
39dbj|AK070692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.6
40ref|NM_210178.1| Eremothecium gossypii AEL037Cp (AEL037C), mRNA 38 4.6
41gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 4.6
42ref|NM_001013096.1| Rattus norvegicus v-myc myelocytomatosis vir... 38 4.6
43gb|AE017221.1| Thermus thermophilus HB27, complete genome 38 4.6
44gb|M33159.1|TTHISOR T.thermophilus insertion sequences Is1000A a... 38 4.6 
>gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, complete sequence
          Length = 183307

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 69     ctccggctcccctcccaccgccgcccctgcc 99
              |||| |||||||||||||||| |||||||||
Sbjct: 148141 ctccagctcccctcccaccgcagcccctgcc 148111
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>gb|U36790.1|OCU36790 Oryctolagus cuniculus putative chloride channel mRNA, complete cds
          Length = 2344

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 82  cccaccgccgcccctgccacc 102
           |||||||||||||||||||||
Sbjct: 674 cccaccgccgcccctgccacc 654
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>gb|U36789.1|OCU36789 Oryctolagus cuniculus putative chloride channel mRNA, complete cds
          Length = 2553

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 82  cccaccgccgcccctgccacc 102
           |||||||||||||||||||||
Sbjct: 721 cccaccgccgcccctgccacc 701
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>gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940136D9, complete sequence
          Length = 121820

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    ccgttgccgtggacgagggc 65
             ||||||||||||||||||||
Sbjct: 57788 ccgttgccgtggacgagggc 57769
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>ref|XM_426303.1| PREDICTED: Gallus gallus LOC428747 (LOC428747), mRNA
          Length = 3339

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 72   cggctcccctcccaccgccgcccc 95
            ||||||||| ||||||||||||||
Sbjct: 3030 cggctccccccccaccgccgcccc 3007
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>gb|AY452788.1| uncultured foraminiferan clone McM5 SSU ribosomal RNA gene, partial
           sequence
          Length = 960

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 78  ccctcccaccgccgcccctg 97
           ||||||||||||||||||||
Sbjct: 276 ccctcccaccgccgcccctg 295
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>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence
          Length = 182230

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 76    tcccctcccaccgccgcccctgcc 99
             |||||||||||| |||||||||||
Sbjct: 63951 tcccctcccaccaccgcccctgcc 63974
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>emb|AJ307768.1|NSP307768 Nemogullmia sp. A330 partial 18S rRNA gene, isolate A330
          Length = 1097

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 78  ccctcccaccgccgcccctg 97
           ||||||||||||||||||||
Sbjct: 275 ccctcccaccgccgcccctg 294
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>ref|XM_482490.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1941

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 45   gccgttgccgtggacgagggcgg 67
            |||||||||||||| ||||||||
Sbjct: 1329 gccgttgccgtggaggagggcgg 1307
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>ref|XM_468448.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 921

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 76 tcccctcccaccgccgcccctgc 98
          |||||||||||||||||| ||||
Sbjct: 81 tcccctcccaccgccgccactgc 59
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>ref|NM_190668.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1359

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 86   ccgccgcccctgccacctc 104
            |||||||||||||||||||
Sbjct: 1207 ccgccgcccctgccacctc 1189
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>ref|NM_190978.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1365

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 75  ctcccctcccaccgccgcc 93
           |||||||||||||||||||
Sbjct: 123 ctcccctcccaccgccgcc 141
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>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             B1356F10, complete sequence
          Length = 170681

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 75    ctcccctcccaccgccgcc 93
             |||||||||||||||||||
Sbjct: 85606 ctcccctcccaccgccgcc 85624
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>emb|AL645703.18| Human DNA sequence from clone RP3-484O5 on chromosome 1 Contains part
             of the PRKCZ gene for protein kinase C (zeta) and two CpG
             islands, complete sequence
          Length = 47568

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 77    cccctcccaccgccgcccctgcc 99
             |||| ||||||||||||||||||
Sbjct: 36496 ccccccccaccgccgcccctgcc 36518
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>emb|AL162391.15| Human DNA sequence from clone RP11-438L3 on chromosome 9 Contains the
             5' end of a novel gene, complete sequence
          Length = 28420

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 76    tcccctcccaccgccgccc 94
             |||||||||||||||||||
Sbjct: 21207 tcccctcccaccgccgccc 21189
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>emb|AL031716.8|HS360B4 Human DNA sequence from clone LA16c-360B4 on chromosome 16 Contains
             part of a gene for a PUTATIVE novel protein similar to
             predicted bacterial and worm proteins and ESTs, complete
             sequence
          Length = 23388

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 36    ctcaccccggccgttgccgtgga 58
             |||||||| ||||||||||||||
Sbjct: 10809 ctcacccctgccgttgccgtgga 10831
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>emb|X63281.1|RNNMYC R.norvegicus N-myc gene
          Length = 6951

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 77   cccctcccaccgccgcccc 95
            |||||||||||||||||||
Sbjct: 1103 cccctcccaccgccgcccc 1121
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>gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8
          Length = 278911

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 36    ctcaccccggccgttgccgtgga 58
             |||||||| ||||||||||||||
Sbjct: 88335 ctcacccctgccgttgccgtgga 88357
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>gb|DQ384260.1| Anomochloa marantoidea clone AmTS2-dupl tasselseed2-like
           short-chain dehydrogenase/reductase gene, partial cds
          Length = 741

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  ctcccctcccaccgccgcc 93
           |||||||||||||||||||
Sbjct: 120 ctcccctcccaccgccgcc 102
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 79     cctcccaccgccgcccctg 97
              |||||||||||||||||||
Sbjct: 564420 cctcccaccgccgcccctg 564402
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>emb|BX296548.20| Pig DNA sequence from clone PigE-193I9, complete sequence
          Length = 172252

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 73    ggctcccctcccaccgccgcccc 95
             ||||||||||||||| |||||||
Sbjct: 59088 ggctcccctcccaccaccgcccc 59110
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 75       ctcccctcccaccgccgcc 93
                |||||||||||||||||||
Sbjct: 21562087 ctcccctcccaccgccgcc 21562105
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 35      gctcaccccggccgttgccgtgg 57
               |||||| ||||||||||||||||
Sbjct: 6558068 gctcacaccggccgttgccgtgg 6558090
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 76       tcccctcccaccgccgcccctgc 98
                |||||||||||||||||| ||||
Sbjct: 35290356 tcccctcccaccgccgccactgc 35290334



 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 75       ctcccctcccaccgccgcc 93
                |||||||||||||||||||
Sbjct: 11607758 ctcccctcccaccgccgcc 11607776
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 86       ccgccgcccctgccacctc 104
                |||||||||||||||||||
Sbjct: 37006392 ccgccgcccctgccacctc 37006374



 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 75       ctcccctcccaccgccgcc 93
                |||||||||||||||||||
Sbjct: 34129248 ctcccctcccaccgccgcc 34129266



 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 75       ctcccctcccaccgccgcc 93
                |||||||||||||||||||
Sbjct: 25327085 ctcccctcccaccgccgcc 25327103
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>dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1158C05
          Length = 145514

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 75     ctcccctcccaccgccgcc 93
              |||||||||||||||||||
Sbjct: 124129 ctcccctcccaccgccgcc 124147
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>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034E02
          Length = 165497

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 75     ctcccctcccaccgccgcc 93
              |||||||||||||||||||
Sbjct: 125726 ctcccctcccaccgccgcc 125744
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>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1402_H07
          Length = 140620

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    ccgccgcccctgccacctc 104
             |||||||||||||||||||
Sbjct: 96696 ccgccgcccctgccacctc 96678
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>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0683F02
          Length = 153388

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 86   ccgccgcccctgccacctc 104
            |||||||||||||||||||
Sbjct: 7533 ccgccgcccctgccacctc 7515
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 59     cgagggcggactccggctcccct 81
              ||||||||| |||||||||||||
Sbjct: 875080 cgagggcggcctccggctcccct 875102
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>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1119_A01
          Length = 108727

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 76    tcccctcccaccgccgcccctgc 98
             |||||||||||||||||| ||||
Sbjct: 40690 tcccctcccaccgccgccactgc 40668
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>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0663E10
          Length = 162297

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 75    ctcccctcccaccgccgcc 93
             |||||||||||||||||||
Sbjct: 17085 ctcccctcccaccgccgcc 17103
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>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0010K08
          Length = 184760

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 75    ctcccctcccaccgccgcc 93
             |||||||||||||||||||
Sbjct: 54047 ctcccctcccaccgccgcc 54065
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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0474F11
          Length = 139544

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 76     tcccctcccaccgccgcccctgc 98
              |||||||||||||||||| ||||
Sbjct: 102406 tcccctcccaccgccgccactgc 102384
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>dbj|AP005494.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0086M15
          Length = 153491

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 35     gctcaccccggccgttgccgtgg 57
              |||||| ||||||||||||||||
Sbjct: 139543 gctcacaccggccgttgccgtgg 139565
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>dbj|AK107033.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-B06, full
           insert sequence
          Length = 789

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 75  ctcccctcccaccgccgcc 93
           |||||||||||||||||||
Sbjct: 124 ctcccctcccaccgccgcc 142
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>dbj|AK103477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130D23, full
           insert sequence
          Length = 1824

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 76  tcccctcccaccgccgcccctgc 98
           |||||||||||||||||| ||||
Sbjct: 173 tcccctcccaccgccgccactgc 151
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>dbj|AK071291.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088O08,
          full insert sequence
          Length = 1077

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 76 tcccctcccaccgccgcccctgc 98
          |||||||||||||||||| ||||
Sbjct: 59 tcccctcccaccgccgccactgc 37
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>dbj|AK070692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058J09,
          full insert sequence
          Length = 2277

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 75 ctcccctcccaccgccgcc 93
          |||||||||||||||||||
Sbjct: 5  ctcccctcccaccgccgcc 23
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>ref|NM_210178.1| Eremothecium gossypii AEL037Cp (AEL037C), mRNA
          Length = 1401

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 79   cctcccaccgccgcccctg 97
            |||||||||||||||||||
Sbjct: 1115 cctcccaccgccgcccctg 1133
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 75       ctcccctcccaccgccgcc 93
                |||||||||||||||||||
Sbjct: 21872286 ctcccctcccaccgccgcc 21872304
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>ref|NM_001013096.1| Rattus norvegicus v-myc myelocytomatosis viral related oncogene,
           neuroblastoma derived (avian) (mapped) (Mycn_mapped),
           mRNA
          Length = 2604

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 77  cccctcccaccgccgcccc 95
           |||||||||||||||||||
Sbjct: 123 cccctcccaccgccgcccc 141
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 59     cgagggcggactccggctcccct 81
              ||||||||| |||||||||||||
Sbjct: 541661 cgagggcggcctccggctcccct 541683
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>gb|M33159.1|TTHISOR T.thermophilus insertion sequences Is1000A and Is1000B
          Length = 6434

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 59   cgagggcggactccggctcccct 81
            ||||||||| |||||||||||||
Sbjct: 2868 cgagggcggcctccggctcccct 2846


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 705,772
Number of Sequences: 3902068
Number of extensions: 705772
Number of successful extensions: 54192
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53737
Number of HSP's gapped (non-prelim): 455
length of query: 104
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 83
effective length of database: 17,151,101,840
effective search space: 1423541452720
effective search space used: 1423541452720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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