ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart20e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105601.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 3e-98
2dbj|AK101147.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 3e-98
3ref|XM_475457.1| Oryza sativa (japonica cultivar-group), predic... 361 2e-96
4dbj|AK073984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
5gb|AY108562.1| Zea mays PCO098370 mRNA sequence 172 8e-40
6gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 153 7e-34
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
8ref|XM_472721.1| Oryza sativa (japonica cultivar-group), predic... 147 5e-32
9emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4,... 147 5e-32
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
11dbj|AK121783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 5e-32
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 2e-12
13gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 82 2e-12
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
15ref|XM_532646.2| PREDICTED: Canis familiaris similar to WD repea... 44 0.49
16emb|CR712982.2|CNS0GD36 Tetraodon nigroviridis full-length cDNA 44 0.49
17gb|AY657912.1| Synthetic construct Peudomonas aeruginosa clone F... 42 1.9
18gb|AE007246.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 42 1.9
19gb|AE011768.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.9
20gb|AC152170.4| Ornithorhynchus anatinus BAC clone OABb-47A1 from... 42 1.9
21dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
22gb|AE004793.1| Pseudomonas aeruginosa PAO1, section 354 of 529 o... 42 1.9
23dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
24dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
25gb|U38648.1|EHBIOTOP2 Erwinia herbicola biotin synthetase (bioB)... 42 1.9
26gb|L10064.1|STMMUTA Streptomyces cinnamonensis methylmalonyl-CoA... 42 1.9
27ref|XM_465099.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.6
28gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.6
29ref|XM_414530.1| PREDICTED: Gallus gallus similar to KIAA1181 pr... 40 7.6
30gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
31gb|AF543198.1| Hordeum vulgare subsp. vulgare phosphate transpor... 40 7.6
32ref|XM_569654.1| Cryptococcus neoformans var. neoformans JEC21 e... 40 7.6
33gb|AC122421.4| Mus musculus BAC clone RP24-169J24 from chromosom... 40 7.6
34ref|XM_765470.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 7.6
35gb|AC100550.7| Mus musculus chromosome 9, clone RP23-152P11, com... 40 7.6
36emb|AL590406.6| Human DNA sequence from clone RP11-418P12 on chr... 40 7.6
37gb|AC011276.12| Homo sapiens chromosome , clone RP11-13J17, comp... 40 7.6
38gb|AC055855.9| Homo sapiens chromosome 15, clone RP11-352G18, co... 40 7.6
39gb|CP000088.1| Thermobifida fusca YX, complete genome 40 7.6
40emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 7.6
41gb|AC150250.1| Uncultured bacterium zdt-25h12 clone zdt-25h12, c... 40 7.6
42gb|AC110081.3| Homo sapiens BAC clone RP11-453M2 from 4, complet... 40 7.6
43gb|CP000249.1| Frankia sp. CcI3, complete genome 40 7.6
44emb|CR523788.1| Gallus gallus finished cDNA, clone ChEST559k5 40 7.6
45gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 40 7.6
46dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
47dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
48gb|AE009496.1| Brucella melitensis 16M chromosome I, section 53 ... 40 7.6
49dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
50dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.6
51gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 7.6
52emb|X75348.1|GGDNAIB3 G.gallus (white, leggerans) Avian Integrin... 40 7.6
53dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
54dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
55emb|Y14327.1|SEY14327 Saccharopolyspora erythraea partial ermE a... 40 7.6
56dbj|AK066972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
57emb|AL732598.10| Zebrafish DNA sequence from clone CH211-10E8 in... 40 7.6
58gb|AF110180.1|AF110180 Triticum aestivum high-affinity phosphate... 40 7.6
59emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 7.6 
>dbj|AK105601.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A06, full
           insert sequence
          Length = 1630

 Score =  367 bits (185), Expect = 3e-98
 Identities = 341/393 (86%)
 Strand = Plus / Plus

                                                                       
Query: 162 gggagatggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacg 221
           |||||||||| ||| |||||   ||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 195 gggagatggaggggttcctgcagaagctgaaggggctggacgcgtaccccaaggtgaacg 254

                                                                       
Query: 222 aggacttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtca 281
           |||||||||||||||| |||||||||||||||||||||||| || || || || ||||||
Sbjct: 255 aggacttctacaagcggacgctctccggcggcgtcgtcacggtcgtcgcctccgtcgtca 314

                                                                       
Query: 282 tgctgctcctcttcgtctccgagacgaagtcgtatttttattcagcaaccgagaccaagc 341
           ||||||| || ||||||||||||||   ||| ||||||||||||||||| ||||| ||||
Sbjct: 315 tgctgctgctgttcgtctccgagacccggtcatatttttattcagcaacagagactaagc 374

                                                                       
Query: 342 tagtggtagacacgtcaagaggagaaaggctaagagtaaattttgatattactttcccga 401
           ||||||| ||||| |||||||| ||||||||| |||| ||||||||  | ||||| ||||
Sbjct: 375 tagtggttgacacatcaagaggggaaaggctacgagttaattttgacgtaacttttccga 434

                                                                       
Query: 402 gtattccttgcacccttctcagtgttgatacaagggatattagtggcgagcagcaccagg 461
           || |||| ||||||||||||||||||||||| | |||||||||||| |||||||| || |
Sbjct: 435 gtgttccctgcacccttctcagtgttgataccatggatattagtggagagcagcatcatg 494

                                                                       
Query: 462 acattaggcatgacattgaaaagaaaagattggactcacatggtaacgtcattgaatcaa 521
           ||||||||||||| || |||||||   |||| ||| |||||||||| ||||||||  | |
Sbjct: 495 acattaggcatgatatagaaaagaggcgattagacgcacatggtaatgtcattgaggcta 554

                                            
Query: 522 gaaaagaaggcattggtggaacaaagattgaga 554
           |||||||||||||||||||| ||||||| ||||
Sbjct: 555 gaaaagaaggcattggtggagcaaagatagaga 587
to top
>dbj|AK101147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026P06, full
           insert sequence
          Length = 1874

 Score =  367 bits (185), Expect = 3e-98
 Identities = 341/393 (86%)
 Strand = Plus / Plus

                                                                       
Query: 162 gggagatggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacg 221
           |||||||||| ||| |||||   ||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 208 gggagatggaggggttcctgcagaagctgaaggggctggacgcgtaccccaaggtgaacg 267

                                                                       
Query: 222 aggacttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtca 281
           |||||||||||||||| |||||||||||||||||||||||| || || || || ||||||
Sbjct: 268 aggacttctacaagcggacgctctccggcggcgtcgtcacggtcgtcgcctccgtcgtca 327

                                                                       
Query: 282 tgctgctcctcttcgtctccgagacgaagtcgtatttttattcagcaaccgagaccaagc 341
           ||||||| || ||||||||||||||   ||| ||||||||||||||||| ||||| ||||
Sbjct: 328 tgctgctgctgttcgtctccgagacccggtcatatttttattcagcaacagagactaagc 387

                                                                       
Query: 342 tagtggtagacacgtcaagaggagaaaggctaagagtaaattttgatattactttcccga 401
           ||||||| ||||| |||||||| ||||||||| |||| ||||||||  | ||||| ||||
Sbjct: 388 tagtggttgacacatcaagaggggaaaggctacgagttaattttgacgtaacttttccga 447

                                                                       
Query: 402 gtattccttgcacccttctcagtgttgatacaagggatattagtggcgagcagcaccagg 461
           || |||| ||||||||||||||||||||||| | |||||||||||| |||||||| || |
Sbjct: 448 gtgttccctgcacccttctcagtgttgataccatggatattagtggagagcagcatcatg 507

                                                                       
Query: 462 acattaggcatgacattgaaaagaaaagattggactcacatggtaacgtcattgaatcaa 521
           ||||||||||||| || |||||||   |||| ||| |||||||||| ||||||||  | |
Sbjct: 508 acattaggcatgatatagaaaagaggcgattagacgcacatggtaatgtcattgaggcta 567

                                            
Query: 522 gaaaagaaggcattggtggaacaaagattgaga 554
           |||||||||||||||||||| ||||||| ||||
Sbjct: 568 gaaaagaaggcattggtggagcaaagatagaga 600
to top
>ref|XM_475457.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1155

 Score =  361 bits (182), Expect = 2e-96
 Identities = 323/370 (87%)
 Strand = Plus / Plus

                                                                       
Query: 185 aagctcaaggggctcgacgcctaccccaaggtcaacgaggacttctacaagcgcacgctc 244
           ||||| |||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct: 19  aagctgaaggggctggacgcgtaccccaaggtgaacgaggacttctacaagcggacgctc 78

                                                                       
Query: 245 tccggcggcgtcgtcacgctcctctccgccttcgtcatgctgctcctcttcgtctccgag 304
           |||||||||||||||||| || || || || ||||||||||||| || ||||||||||||
Sbjct: 79  tccggcggcgtcgtcacggtcgtcgcctccgtcgtcatgctgctgctgttcgtctccgag 138

                                                                       
Query: 305 acgaagtcgtatttttattcagcaaccgagaccaagctagtggtagacacgtcaagagga 364
           ||   ||| ||||||||||||||||| ||||| ||||||||||| ||||| |||||||| 
Sbjct: 139 acccggtcatatttttattcagcaacagagactaagctagtggttgacacatcaagaggg 198

                                                                       
Query: 365 gaaaggctaagagtaaattttgatattactttcccgagtattccttgcacccttctcagt 424
           ||||||||| |||| ||||||||  | ||||| |||||| |||| |||||||||||||||
Sbjct: 199 gaaaggctacgagttaattttgacgtaacttttccgagtgttccctgcacccttctcagt 258

                                                                       
Query: 425 gttgatacaagggatattagtggcgagcagcaccaggacattaggcatgacattgaaaag 484
           |||||||| | |||||||||||| |||||||| || |||||||||||||| || ||||||
Sbjct: 259 gttgataccatggatattagtggagagcagcatcatgacattaggcatgatatagaaaag 318

                                                                       
Query: 485 aaaagattggactcacatggtaacgtcattgaatcaagaaaagaaggcattggtggaaca 544
           |   |||| ||| |||||||||| ||||||||  | ||||||||||||||||||||| ||
Sbjct: 319 aggcgattagacgcacatggtaatgtcattgaggctagaaaagaaggcattggtggagca 378

                     
Query: 545 aagattgaga 554
           ||||| ||||
Sbjct: 379 aagatagaga 388
to top
>dbj|AK073984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072O04, full
            insert sequence
          Length = 3048

 Score =  232 bits (117), Expect = 1e-57
 Identities = 210/241 (87%)
 Strand = Plus / Plus

                                                                        
Query: 314  tatttttattcagcaaccgagaccaagctagtggtagacacgtcaagaggagaaaggcta 373
            ||||||||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 835  tatttttattcagcaacagagactaagctagtggttgacacatcaagaggggaaaggcta 894

                                                                        
Query: 374  agagtaaattttgatattactttcccgagtattccttgcacccttctcagtgttgataca 433
             |||| ||||||||  | ||||| |||||| |||| ||||||||||||||||||||||| 
Sbjct: 895  cgagttaattttgacgtaacttttccgagtgttccctgcacccttctcagtgttgatacc 954

                                                                        
Query: 434  agggatattagtggcgagcagcaccaggacattaggcatgacattgaaaagaaaagattg 493
            | |||||||||||| |||||||| || |||||||||||||| || |||||||   |||| 
Sbjct: 955  atggatattagtggagagcagcatcatgacattaggcatgatatagaaaagaggcgatta 1014

                                                                        
Query: 494  gactcacatggtaacgtcattgaatcaagaaaagaaggcattggtggaacaaagattgag 553
            ||| |||||||||| ||||||||  | ||||||||||||||||||||| ||||||| |||
Sbjct: 1015 gacgcacatggtaatgtcattgaggctagaaaagaaggcattggtggagcaaagatagag 1074

             
Query: 554  a 554
            |
Sbjct: 1075 a 1075
to top
>gb|AY108562.1| Zea mays PCO098370 mRNA sequence
          Length = 835

 Score =  172 bits (87), Expect = 8e-40
 Identities = 159/183 (86%)
 Strand = Plus / Plus

                                                                       
Query: 200 gacgcctaccccaaggtcaacgaggacttctacaagcgcacgctctccggcggcgtcgtc 259
           ||||| ||||||||||| |||||||||||||||||| | |||||||  |||||| |||||
Sbjct: 265 gacgcgtaccccaaggtgaacgaggacttctacaagtggacgctctttggcggcatcgtc 324

                                                                       
Query: 260 acgctcctctccgccttcgtcatgctgctcctcttcgtctccgagacgaagtcgtatttt 319
           |||||| || ||||| |||||||| |||| |||||| |||||||||| | ||| ||||||
Sbjct: 325 acgctcgtcgccgccgtcgtcatgttgcttctcttcatctccgagaccaggtcatatttt 384

                                                                       
Query: 320 tattcagcaaccgagaccaagctagtggtagacacgtcaagaggagaaaggctaagagta 379
           ||||||||||| ||||| ||| |||| || ||||| |||||| ||||||||||| |||||
Sbjct: 385 tattcagcaacagagactaagttagttgtggacacatcaagaagagaaaggctacgagta 444

              
Query: 380 aat 382
           |||
Sbjct: 445 aat 447
to top
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0088I06, complete sequence
          Length = 187651

 Score =  153 bits (77), Expect = 7e-34
 Identities = 128/145 (88%)
 Strand = Plus / Plus

                                                                        
Query: 162  gggagatggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacg 221
            |||||||||| ||| |||||   ||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 4610 gggagatggaggggttcctgcagaagctgaaggggctggacgcgtaccccaaggtgaacg 4669

                                                                        
Query: 222  aggacttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtca 281
            |||||||||||||||| |||||||||||||||||||||||| || || || || ||||||
Sbjct: 4670 aggacttctacaagcggacgctctccggcggcgtcgtcacggtcgtcgcctccgtcgtca 4729

                                     
Query: 282  tgctgctcctcttcgtctccgagac 306
            ||||||| || ||||||||||||||
Sbjct: 4730 tgctgctgctgttcgtctccgagac 4754



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                        
Query: 392  actttcccgagtattccttgcacccttctcagtgttgatacaagggatattagtggcgag 451
            ||||| |||||| |||| ||||||||||||||||||||||| | |||||||||||| |||
Sbjct: 5836 acttttccgagtgttccctgcacccttctcagtgttgataccatggatattagtggagag 5895

                           
Query: 452  cagcaccaggacatt 466
            ||||| || ||||||
Sbjct: 5896 cagcatcatgacatt 5910



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                        
Query: 314  tatttttattcagcaaccgagaccaagctagtggtagacacgtcaagaggagaaaggcta 373
            ||||||||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 5595 tatttttattcagcaacagagactaagctagtggttgacacatcaagaggggaaaggcta 5654

                 
Query: 374  agagt 378
             ||||
Sbjct: 5655 cgagt 5659



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                        
Query: 467  aggcatgacattgaaaagaaaagattggactcacatggtaacgtcattgaatcaagaaaa 526
            |||||||| || |||||||   |||| ||| |||||||||| ||||||||  | ||||||
Sbjct: 5991 aggcatgatatagaaaagaggcgattagacgcacatggtaatgtcattgaggctagaaaa 6050

                                 
Query: 527  gaaggcattggtggaacaaag 547
            ||||||||||||||| |||||
Sbjct: 6051 gaaggcattggtggagcaaag 6071
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  153 bits (77), Expect = 7e-34
 Identities = 128/145 (88%)
 Strand = Plus / Plus

                                                                            
Query: 162      gggagatggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacg 221
                |||||||||| ||| |||||   ||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 23936121 gggagatggaggggttcctgcagaagctgaaggggctggacgcgtaccccaaggtgaacg 23936180

                                                                            
Query: 222      aggacttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtca 281
                |||||||||||||||| |||||||||||||||||||||||| || || || || ||||||
Sbjct: 23936181 aggacttctacaagcggacgctctccggcggcgtcgtcacggtcgtcgcctccgtcgtca 23936240

                                         
Query: 282      tgctgctcctcttcgtctccgagac 306
                ||||||| || ||||||||||||||
Sbjct: 23936241 tgctgctgctgttcgtctccgagac 23936265



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 392      actttcccgagtattccttgcacccttctcagtgttgatacaagggatattagtggcgag 451
                ||||| |||||| |||| ||||||||||||||||||||||| | |||||||||||| |||
Sbjct: 23937347 acttttccgagtgttccctgcacccttctcagtgttgataccatggatattagtggagag 23937406

                               
Query: 452      cagcaccaggacatt 466
                ||||| || ||||||
Sbjct: 23937407 cagcatcatgacatt 23937421



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                            
Query: 314      tatttttattcagcaaccgagaccaagctagtggtagacacgtcaagaggagaaaggcta 373
                ||||||||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 23937106 tatttttattcagcaacagagactaagctagtggttgacacatcaagaggggaaaggcta 23937165

                     
Query: 374      agagt 378
                 ||||
Sbjct: 23937166 cgagt 23937170



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                            
Query: 467      aggcatgacattgaaaagaaaagattggactcacatggtaacgtcattgaatcaagaaaa 526
                |||||||| || |||||||   |||| ||| |||||||||| ||||||||  | ||||||
Sbjct: 23937502 aggcatgatatagaaaagaggcgattagacgcacatggtaatgtcattgaggctagaaaa 23937561

                                     
Query: 527      gaaggcattggtggaacaaag 547
                ||||||||||||||| |||||
Sbjct: 23937562 gaaggcattggtggagcaaag 23937582



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 145      ccggcggccgccgaggaggg 164
                ||||||||||||||||||||
Sbjct: 27420436 ccggcggccgccgaggaggg 27420417
to top
>ref|XM_472721.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1161

 Score =  147 bits (74), Expect = 5e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                       
Query: 167 atggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacgaggac 226
           ||||| ||||||||||||||||||  | | || ||||||||||||||||| |||||||||
Sbjct: 1   atggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaacgaggac 60

                                                                       
Query: 227 ttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtcatgctg 286
           |||||||  |||||||||||||||||| || ||||||||  |||| || |||||||||| 
Sbjct: 61  ttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtcatgctc 120

                             
Query: 287 ctcctcttcgtctccgag 304
           ||||||||||||||||||
Sbjct: 121 ctcctcttcgtctccgag 138
to top
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15,
              complete sequence
          Length = 143109

 Score =  147 bits (74), Expect = 5e-32
 Identities = 122/138 (88%)
 Strand = Plus / Minus

                                                                          
Query: 167    atggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacgaggac 226
              ||||| ||||||||||||||||||  | | || ||||||||||||||||| |||||||||
Sbjct: 123839 atggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaacgaggac 123780

                                                                          
Query: 227    ttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtcatgctg 286
              |||||||  |||||||||||||||||| || ||||||||  |||| || |||||||||| 
Sbjct: 123779 ttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtcatgctc 123720

                                
Query: 287    ctcctcttcgtctccgag 304
              ||||||||||||||||||
Sbjct: 123719 ctcctcttcgtctccgag 123702
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  147 bits (74), Expect = 5e-32
 Identities = 122/138 (88%)
 Strand = Plus / Minus

                                                                            
Query: 167      atggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacgaggac 226
                ||||| ||||||||||||||||||  | | || ||||||||||||||||| |||||||||
Sbjct: 22786643 atggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaacgaggac 22786584

                                                                            
Query: 227      ttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtcatgctg 286
                |||||||  |||||||||||||||||| || ||||||||  |||| || |||||||||| 
Sbjct: 22786583 ttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtcatgctc 22786524

                                  
Query: 287      ctcctcttcgtctccgag 304
                ||||||||||||||||||
Sbjct: 22786523 ctcctcttcgtctccgag 22786506
to top
>dbj|AK121783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A05, full
           insert sequence
          Length = 2103

 Score =  147 bits (74), Expect = 5e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                       
Query: 167 atggacgggctcctgtccaagctcaaggggctcgacgcctaccccaaggtcaacgaggac 226
           ||||| ||||||||||||||||||  | | || ||||||||||||||||| |||||||||
Sbjct: 170 atggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaacgaggac 229

                                                                       
Query: 227 ttctacaagcgcacgctctccggcggcgtcgtcacgctcctctccgccttcgtcatgctg 286
           |||||||  |||||||||||||||||| || ||||||||  |||| || |||||||||| 
Sbjct: 230 ttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtcatgctc 289

                             
Query: 287 ctcctcttcgtctccgag 304
           ||||||||||||||||||
Sbjct: 290 ctcctcttcgtctccgag 307
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 197      ctcgacgcctaccccaaggtcaacgaggacttctacaagcgcacgctctccggcggc 253
                |||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||
Sbjct: 11600829 ctcgacgcctaccccaaggtgaacgaggacttctacagccgcaccctctccggcggc 11600773



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 276      tcgtcatgctgctcctcttc 295
                ||||||||||||||||||||
Sbjct: 35883210 tcgtcatgctgctcctcttc 35883191
to top
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                       
Query: 197    ctcgacgcctaccccaaggtcaacgaggacttctacaagcgcacgctctccggcggc 253
              |||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||
Sbjct: 151401 ctcgacgcctaccccaaggtgaacgaggacttctacagccgcaccctctccggcggc 151345
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 197      ctcgacgcctaccccaaggtcaacgaggacttctacaagcgcacgctctccggcggc 253
                |||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||
Sbjct: 11597592 ctcgacgcctaccccaaggtgaacgaggacttctacagccgcaccctctccggcggc 11597536



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 276      tcgtcatgctgctcctcttc 295
                ||||||||||||||||||||
Sbjct: 35973340 tcgtcatgctgctcctcttc 35973321
to top
>ref|XM_532646.2| PREDICTED: Canis familiaris similar to WD repeat domain 51B
           (LOC475422), mRNA
          Length = 2795

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 41  acccgcacccgcacccggcgga 62
           ||||||||||||||||||||||
Sbjct: 745 acccgcacccgcacccggcgga 766
to top
>emb|CR712982.2|CNS0GD36 Tetraodon nigroviridis full-length cDNA
          Length = 1130

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 263 ctcctctccgccttcgtcatgctgct 288
           ||||||||||||||| ||||||||||
Sbjct: 228 ctcctctccgccttcctcatgctgct 203
to top
>gb|AY657912.1| Synthetic construct Peudomonas aeruginosa clone FLH045902.01F
           PA3744 gene, partial cds
          Length = 528

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 ccaagctcaaggggctcgacg 203
           |||||||||||||||||||||
Sbjct: 200 ccaagctcaaggggctcgacg 220
to top
>gb|AE007246.1| Sinorhizobium meliloti 1021 plasmid pSymA section 52 of 121 of the
            complete plasmid sequence
          Length = 10029

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 38   ccgacccgcacccgcacccgg 58
            |||||||||||||||||||||
Sbjct: 7038 ccgacccgcacccgcacccgg 7018
to top
>gb|AE011768.1| Xanthomonas axonopodis pv. citri str. 306,  section 146 of 469 of the
            complete genome
          Length = 12907

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 144  tccggcggccgccgaggaggg 164
            |||||||||||||||||||||
Sbjct: 3194 tccggcggccgccgaggaggg 3214
to top
>gb|AC152170.4| Ornithorhynchus anatinus BAC clone OABb-47A1 from chromosome unknown,
             complete sequence
          Length = 151943

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 481   aaagaaaagattggactcaca 501
             |||||||||||||||||||||
Sbjct: 31787 aaagaaaagattggactcaca 31807
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 515      gaatcaagaaaagaaggcatt 535
                |||||||||||||||||||||
Sbjct: 11829122 gaatcaagaaaagaaggcatt 11829102
to top
>gb|AE004793.1| Pseudomonas aeruginosa PAO1, section 354 of 529 of the complete
            genome
          Length = 11506

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 183  ccaagctcaaggggctcgacg 203
            |||||||||||||||||||||
Sbjct: 6870 ccaagctcaaggggctcgacg 6850
to top
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 515   gaatcaagaaaagaaggcatt 535
             |||||||||||||||||||||
Sbjct: 10612 gaatcaagaaaagaaggcatt 10592
to top
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1506_A04
          Length = 114998

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 515   gaatcaagaaaagaaggcatt 535
             |||||||||||||||||||||
Sbjct: 71940 gaatcaagaaaagaaggcatt 71920
to top
>gb|U38648.1|EHBIOTOP2 Erwinia herbicola biotin synthetase (bioB) gene, complete cds
          Length = 1041

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 237 gcacgctctccggcggcgtcg 257
           |||||||||||||||||||||
Sbjct: 658 gcacgctctccggcggcgtcg 638
to top
>gb|L10064.1|STMMUTA Streptomyces cinnamonensis methylmalonyl-CoA mutase small subunit
            (mutA) and large subunit (mutB) genes, complete cds's
          Length = 5732

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 248  ggcggcgtcgtcacgctcctc 268
            |||||||||||||||||||||
Sbjct: 4697 ggcggcgtcgtcacgctcctc 4677
to top
>ref|XM_465099.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1822

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 146 cggcggccgccgaggagggagatg 169
           ||||||||| ||||||||||||||
Sbjct: 210 cggcggccggcgaggagggagatg 233
to top
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 151     gccgccgaggagggagatgg 170
               ||||||||||||||||||||
Sbjct: 1036700 gccgccgaggagggagatgg 1036681
to top
>ref|XM_414530.1| PREDICTED: Gallus gallus similar to KIAA1181 protein (LOC416205),
           partial mRNA
          Length = 2168

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 539 ggaacaaagattgagaaacc 558
           ||||||||||||||||||||
Sbjct: 750 ggaacaaagattgagaaacc 769
to top
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03,
             complete sequence
          Length = 144601

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   ccggcggccgccgaggaggg 164
             ||||||||||||||||||||
Sbjct: 16566 ccggcggccgccgaggaggg 16547
to top
>gb|AF543198.1| Hordeum vulgare subsp. vulgare phosphate transporter 6 (Pht1-6) gene,
            complete cds
          Length = 2876

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  ccggcggcgtcgtcacgctc 265
            ||||||||||||||||||||
Sbjct: 1449 ccggcggcgtcgtcacgctc 1468
to top
>ref|XM_569654.1| Cryptococcus neoformans var. neoformans JEC21 elongation factor ts
           (ef-ts) (CNC03280) partial mRNA
          Length = 1113

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 gccgccgaggagggagatgg 170
           ||||||||||||||||||||
Sbjct: 321 gccgccgaggagggagatgg 302
to top
>gb|AC122421.4| Mus musculus BAC clone RP24-169J24 from chromosome 6, complete sequence
          Length = 154134

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   catgacattgaaaagaaaag 489
             ||||||||||||||||||||
Sbjct: 46201 catgacattgaaaagaaaag 46182
to top
>ref|XM_765470.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_567_63122_61527)
            partial mRNA
          Length = 1596

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 523  aaaagaaggcattggtggaacaaa 546
            ||||||||||||||| ||||||||
Sbjct: 1397 aaaagaaggcattggaggaacaaa 1420
to top
>gb|AC100550.7| Mus musculus chromosome 9, clone RP23-152P11, complete sequence
          Length = 188119

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   agcaccaggacattaggcat 472
             ||||||||||||||||||||
Sbjct: 68053 agcaccaggacattaggcat 68034
to top
>emb|AL590406.6| Human DNA sequence from clone RP11-418P12 on chromosome 6, complete
             sequence
          Length = 164831

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 480   aaaagaaaagattggactca 499
             ||||||||||||||||||||
Sbjct: 50906 aaaagaaaagattggactca 50887
to top
>gb|AC011276.12| Homo sapiens chromosome , clone RP11-13J17, complete sequence
          Length = 98967

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   ttccttgcacccttctcagt 424
             ||||||||||||||||||||
Sbjct: 74037 ttccttgcacccttctcagt 74018
to top
>gb|AC055855.9| Homo sapiens chromosome 15, clone RP11-352G18, complete sequence
          Length = 158420

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    ttccttgcacccttctcagt 424
              ||||||||||||||||||||
Sbjct: 149786 ttccttgcacccttctcagt 149805
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    cggcggccgccgaggaggga 165
              ||||||||||||||||||||
Sbjct: 877916 cggcggccgccgaggaggga 877935
to top
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 43   ccgcacccgcacccggcgga 62
            ||||||||||||||||||||
Sbjct: 995  ccgcacccgcacccggcgga 1014
to top
>gb|AC150250.1| Uncultured bacterium zdt-25h12 clone zdt-25h12, complete sequence
          Length = 41495

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gcgcacgctctccggcggcg 254
            ||||||||||||||||||||
Sbjct: 7743 gcgcacgctctccggcggcg 7724
to top
>gb|AC110081.3| Homo sapiens BAC clone RP11-453M2 from 4, complete sequence
          Length = 44837

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   aagaaaagaaggcattggtg 539
             ||||||||||||||||||||
Sbjct: 23385 aagaaaagaaggcattggtg 23404
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 41      acccgcacccgcacccggcg 60
               ||||||||||||||||||||
Sbjct: 4485165 acccgcacccgcacccggcg 4485184
to top
>emb|CR523788.1| Gallus gallus finished cDNA, clone ChEST559k5
          Length = 1031

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 539  ggaacaaagattgagaaacc 558
            ||||||||||||||||||||
Sbjct: 1007 ggaacaaagattgagaaacc 1026
to top
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   tcgtcatgctgctcctcttc 295
             ||||||||||||||||||||
Sbjct: 77915 tcgtcatgctgctcctcttc 77934
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 479     gaaaagaaaagattggactcacat 502
               ||||||||||| ||||||||||||
Sbjct: 5585943 gaaaagaaaaggttggactcacat 5585966
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 146      cggcggccgccgaggagggagatg 169
                ||||||||| ||||||||||||||
Sbjct: 11487191 cggcggccggcgaggagggagatg 11487168
to top
>gb|AE009496.1| Brucella melitensis 16M chromosome I, section 53 of 195 of the
            complete sequence
          Length = 11993

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  cggcggcgtcgtcacgctcc 266
            ||||||||||||||||||||
Sbjct: 2168 cggcggcgtcgtcacgctcc 2149
to top
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0030M21
          Length = 155970

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 146   cggcggccgccgaggagggagatg 169
             ||||||||| ||||||||||||||
Sbjct: 69683 cggcggccggcgaggagggagatg 69660
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     cacgctctccggcggcgtcg 257
               ||||||||||||||||||||
Sbjct: 7612582 cacgctctccggcggcgtcg 7612601
to top
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     cggcggcgtcgtcacgctcc 266
               ||||||||||||||||||||
Sbjct: 1446422 cggcggcgtcgtcacgctcc 1446441
to top
>emb|X75348.1|GGDNAIB3 G.gallus (white, leggerans) Avian Integrin B3 promoter region DNA
          Length = 902

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 134 gctgctgccttccggcggccgccg 157
           ||||||||| ||||||||||||||
Sbjct: 89  gctgctgccctccggcggccgccg 66
to top
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0412D08
          Length = 150188

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 479   gaaaagaaaagattggactcacat 502
             ||||||||||| ||||||||||||
Sbjct: 41319 gaaaagaaaaggttggactcacat 41342
to top
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0035F08
          Length = 167446

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 479    gaaaagaaaagattggactcacat 502
              ||||||||||| ||||||||||||
Sbjct: 112171 gaaaagaaaaggttggactcacat 112194
to top
>emb|Y14327.1|SEY14327 Saccharopolyspora erythraea partial ermE and eryBIII genes and eryB
            gene
          Length = 2760

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  cgcctaccccaaggtcaacg 221
            ||||||||||||||||||||
Sbjct: 1858 cgcctaccccaaggtcaacg 1839
to top
>dbj|AK066972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089I06, full
           insert sequence
          Length = 1821

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 146 cggcggccgccgaggagggagatg 169
           ||||||||| ||||||||||||||
Sbjct: 209 cggcggccggcgaggagggagatg 232
to top
>emb|AL732598.10| Zebrafish DNA sequence from clone CH211-10E8 in linkage group 6,
             complete sequence
          Length = 88982

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   cattgaaaagaaaagattgg 494
             ||||||||||||||||||||
Sbjct: 66279 cattgaaaagaaaagattgg 66298
to top
>gb|AF110180.1|AF110180 Triticum aestivum high-affinity phosphate transporter PT1 mRNA,
           partial cds
          Length = 1188

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 246 ccggcggcgtcgtcacgctc 265
           ||||||||||||||||||||
Sbjct: 440 ccggcggcgtcgtcacgctc 459
to top
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     cggcggcgtcgtcacgctcc 266
               ||||||||||||||||||||
Sbjct: 1443576 cggcggcgtcgtcacgctcc 1443595


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,881,003
Number of Sequences: 3902068
Number of extensions: 4881003
Number of successful extensions: 91075
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90287
Number of HSP's gapped (non-prelim): 788
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top