ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart20d12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_462658.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 341 bits (172), Expect = 1e-90 Identities = 275/307 (89%), Gaps = 3/307 (0%) Strand = Plus / Plus Query: 163 agggcctgcgcgtggccctgacgcacgtcgacgcgcacggcaactacacgaagctgcagc 222 |||||||||||||| |||||||||||| |||||||||||||||||| ||| || |||| Sbjct: 86 agggcctgcgcgtgcacctgacgcacgtggacgcgcacggcaactactcgaggcaccagc 145 Query: 223 tgctgcggagggcggcgaggcggagccgccaccgcatgtccaggctcgtcgcgcggacca 282 |||||||| |||||||| ||||||||| |||||||||||| ||||| ||||||||| ||| Sbjct: 146 tgctgcggcgggcggcgcggcggagccaccaccgcatgtcgaggctggtcgcgcgggcca 205 Query: 283 ccggcgtgccggtgatgtcgagcaaggcggtcg-cgccggc--cctgcaggtgcctgtgc 339 ||||||||||| ||| |||||||||||||| || || ||| |||||||||||| |||| Sbjct: 206 ccggcgtgccgatgacgtcgagcaaggcggccggcggcggggacctgcaggtgccggtgc 265 Query: 340 acgccgggaacggcgagttcctgatggacatgtccatcggcacgcccgcggtggcgtacg 399 ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| ||| Sbjct: 266 acgccgggaacggcgagttcctgatggacgtgtccatcggcacgccggcgctggcctact 325 Query: 400 cggacatcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggagt 459 | | |||| | ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 326 ccgccatcgtggacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggact 385 Query: 460 gcttcaa 466 ||||||| Sbjct: 386 gcttcaa 392
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 341 bits (172), Expect = 1e-90 Identities = 275/307 (89%), Gaps = 3/307 (0%) Strand = Plus / Plus Query: 163 agggcctgcgcgtggccctgacgcacgtcgacgcgcacggcaactacacgaagctgcagc 222 |||||||||||||| |||||||||||| |||||||||||||||||| ||| || |||| Sbjct: 22322924 agggcctgcgcgtgcacctgacgcacgtggacgcgcacggcaactactcgaggcaccagc 22322983 Query: 223 tgctgcggagggcggcgaggcggagccgccaccgcatgtccaggctcgtcgcgcggacca 282 |||||||| |||||||| ||||||||| |||||||||||| ||||| ||||||||| ||| Sbjct: 22322984 tgctgcggcgggcggcgcggcggagccaccaccgcatgtcgaggctggtcgcgcgggcca 22323043 Query: 283 ccggcgtgccggtgatgtcgagcaaggcggtcg-cgccggc--cctgcaggtgcctgtgc 339 ||||||||||| ||| |||||||||||||| || || ||| |||||||||||| |||| Sbjct: 22323044 ccggcgtgccgatgacgtcgagcaaggcggccggcggcggggacctgcaggtgccggtgc 22323103 Query: 340 acgccgggaacggcgagttcctgatggacatgtccatcggcacgcccgcggtggcgtacg 399 ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| ||| Sbjct: 22323104 acgccgggaacggcgagttcctgatggacgtgtccatcggcacgccggcgctggcctact 22323163 Query: 400 cggacatcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggagt 459 | | |||| | ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 22323164 ccgccatcgtggacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggact 22323223 Query: 460 gcttcaa 466 ||||||| Sbjct: 22323224 gcttcaa 22323230 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagcc 448 |||||||||||||||||||| ||||||||||||| |||| Sbjct: 30109745 tcgacaccggcagcgacctctcgtggacgcagtgcgagcc 30109784 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagcc 448 |||||||||||||||||||| ||||||||||||| |||| Sbjct: 30049042 tcgacaccggcagcgacctctcgtggacgcagtgcgagcc 30049081 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgca 444 |||| |||||||||||||| |||| || ||||||||||||| Sbjct: 6668495 catcgtcgacaccggcagcaaccttgtctggacgcagtgca 6668535 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 409 tcgacaccggcagcgacctcgt 430 |||||||||||||||||||||| Sbjct: 26721593 tcgacaccggcagcgacctcgt 26721572 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgcaagcc 448 ||||||| |||||||||| | |||||||||||| |||| Sbjct: 22328782 gacaccgccagcgacctcatctggacgcagtgccagcc 22328819 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgacct 427 |||||||||||||||||||||| Sbjct: 17526784 tcatcgacaccggcagcgacct 17526805
>dbj|AK120786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010M08, full insert sequence Length = 1770 Score = 341 bits (172), Expect = 1e-90 Identities = 275/307 (89%), Gaps = 3/307 (0%) Strand = Plus / Plus Query: 163 agggcctgcgcgtggccctgacgcacgtcgacgcgcacggcaactacacgaagctgcagc 222 |||||||||||||| |||||||||||| |||||||||||||||||| ||| || |||| Sbjct: 318 agggcctgcgcgtgcacctgacgcacgtggacgcgcacggcaactactcgaggcaccagc 377 Query: 223 tgctgcggagggcggcgaggcggagccgccaccgcatgtccaggctcgtcgcgcggacca 282 |||||||| |||||||| ||||||||| |||||||||||| ||||| ||||||||| ||| Sbjct: 378 tgctgcggcgggcggcgcggcggagccaccaccgcatgtcgaggctggtcgcgcgggcca 437 Query: 283 ccggcgtgccggtgatgtcgagcaaggcggtcg-cgccggc--cctgcaggtgcctgtgc 339 ||||||||||| ||| |||||||||||||| || || ||| |||||||||||| |||| Sbjct: 438 ccggcgtgccgatgacgtcgagcaaggcggccggcggcggggacctgcaggtgccggtgc 497 Query: 340 acgccgggaacggcgagttcctgatggacatgtccatcggcacgcccgcggtggcgtacg 399 ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| ||| Sbjct: 498 acgccgggaacggcgagttcctgatggacgtgtccatcggcacgccggcgctggcctact 557 Query: 400 cggacatcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggagt 459 | | |||| | ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 558 ccgccatcgtggacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggact 617 Query: 460 gcttcaa 466 ||||||| Sbjct: 618 gcttcaa 624
>dbj|AK109494.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A01, full insert sequence Length = 1610 Score = 341 bits (172), Expect = 1e-90 Identities = 275/307 (89%), Gaps = 3/307 (0%) Strand = Plus / Plus Query: 163 agggcctgcgcgtggccctgacgcacgtcgacgcgcacggcaactacacgaagctgcagc 222 |||||||||||||| |||||||||||| |||||||||||||||||| ||| || |||| Sbjct: 140 agggcctgcgcgtgcacctgacgcacgtggacgcgcacggcaactactcgaggcaccagc 199 Query: 223 tgctgcggagggcggcgaggcggagccgccaccgcatgtccaggctcgtcgcgcggacca 282 |||||||| |||||||| ||||||||| |||||||||||| ||||| ||||||||| ||| Sbjct: 200 tgctgcggcgggcggcgcggcggagccaccaccgcatgtcgaggctggtcgcgcgggcca 259 Query: 283 ccggcgtgccggtgatgtcgagcaaggcggtcg-cgccggc--cctgcaggtgcctgtgc 339 ||||||||||| ||| |||||||||||||| || || ||| |||||||||||| |||| Sbjct: 260 ccggcgtgccgatgacgtcgagcaaggcggccggcggcggggacctgcaggtgccggtgc 319 Query: 340 acgccgggaacggcgagttcctgatggacatgtccatcggcacgcccgcggtggcgtacg 399 ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| ||| Sbjct: 320 acgccgggaacggcgagttcctgatggacgtgtccatcggcacgccggcgctggcctact 379 Query: 400 cggacatcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggagt 459 | | |||| | ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 380 ccgccatcgtggacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggact 439 Query: 460 gcttcaa 466 ||||||| Sbjct: 440 gcttcaa 446
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 341 bits (172), Expect = 1e-90 Identities = 275/307 (89%), Gaps = 3/307 (0%) Strand = Plus / Plus Query: 163 agggcctgcgcgtggccctgacgcacgtcgacgcgcacggcaactacacgaagctgcagc 222 |||||||||||||| |||||||||||| |||||||||||||||||| ||| || |||| Sbjct: 73828 agggcctgcgcgtgcacctgacgcacgtggacgcgcacggcaactactcgaggcaccagc 73887 Query: 223 tgctgcggagggcggcgaggcggagccgccaccgcatgtccaggctcgtcgcgcggacca 282 |||||||| |||||||| ||||||||| |||||||||||| ||||| ||||||||| ||| Sbjct: 73888 tgctgcggcgggcggcgcggcggagccaccaccgcatgtcgaggctggtcgcgcgggcca 73947 Query: 283 ccggcgtgccggtgatgtcgagcaaggcggtcg-cgccggc--cctgcaggtgcctgtgc 339 ||||||||||| ||| |||||||||||||| || || ||| |||||||||||| |||| Sbjct: 73948 ccggcgtgccgatgacgtcgagcaaggcggccggcggcggggacctgcaggtgccggtgc 74007 Query: 340 acgccgggaacggcgagttcctgatggacatgtccatcggcacgcccgcggtggcgtacg 399 ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| ||| Sbjct: 74008 acgccgggaacggcgagttcctgatggacgtgtccatcggcacgccggcgctggcctact 74067 Query: 400 cggacatcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggagt 459 | | |||| | ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 74068 ccgccatcgtggacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggact 74127 Query: 460 gcttcaa 466 ||||||| Sbjct: 74128 gcttcaa 74134 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgcaagcc 448 ||||||| |||||||||| | |||||||||||| |||| Sbjct: 79686 gacaccgccagcgacctcatctggacgcagtgccagcc 79723
>ref|NM_185838.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1362 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 373 ccatcggcacgcccgcggtggcgtacgcggacatcatcgacaccggcagcgacctcgtgt 432 ||||||||||||| || | ||||| ||| |||| ||||||||||||||||||||| | Sbjct: 290 ccatcggcacgccgccgcagtcgtacccggccatcgccgacaccggcagcgacctcgtct 349 Query: 433 ggacgcagtgcaagccgtgcgtggag 458 ||||||||||| |||||||| |||| Sbjct: 350 ggacgcagtgcgcgccgtgcggggag 375
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggagtgcttcaacc 468 ||||||||||||||| |||||| |||||||||||| ||||||||| | |||||||||| Sbjct: 11402236 tcgacaccggcagcgtcctcgtctggacgcagtgccagccgtgcgctgtatgcttcaacc 11402295 Query: 469 ag 470 || Sbjct: 11402296 ag 11402297 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||||||||||||||||||| | |||||||||||| |||||||| Sbjct: 11441186 tcgacaccggcagcgacctcatctggacgcagtgccagccgtgc 11441229 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||||||||||||||||||| | |||||||||||| |||||||| Sbjct: 11422709 tcgacaccggcagcgacctcatctggacgcagtgccagccgtgc 11422752 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgc 443 |||| |||||||||||||||||||| | | |||||||||| Sbjct: 21427330 catcgtcgacaccggcagcgacctcatctagacgcagtgc 21427369 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtg 455 |||| |||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 11395824 catcctcgacaccggcagcgacctcacctggacacagtgcgcgccgtgcgtg 11395875 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 gcggagggcggcgaggcggagccgc 251 ||||| ||||||||||||||||||| Sbjct: 4124244 gcggaaggcggcgaggcggagccgc 4124268
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgacctcgtgtggacgcagtgc 443 ||||||||||||||||||||||||| |||||||||||| Sbjct: 24246533 tcatcgacaccggcagcgacctcgtctggacgcagtgc 24246570 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 3932090 tcgacaccggcagcgacctc 3932109
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 373 ccatcggcacgcccgcggtggcgtacgcggacatcatcgacaccggcagcgacctcgtgt 432 ||||||||||||| || | ||||| ||| |||| ||||||||||||||||||||| | Sbjct: 20879344 ccatcggcacgccgccgcagtcgtacccggccatcgccgacaccggcagcgacctcgtct 20879285 Query: 433 ggacgcagtgcaagccgtgcgtggag 458 ||||||||||| |||||||| |||| Sbjct: 20879284 ggacgcagtgcgcgccgtgcggggag 20879259 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgc 443 ||||||| |||||||||||| | |||||||||||| Sbjct: 20874420 tcgacacgggcagcgacctcatctggacgcagtgc 20874386 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 410 cgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||||||||||| |||||| | |||||||||||| ||||||| Sbjct: 20831379 cgacaccggcagtgacctcatctggacgcagtgcgcgccgtgc 20831421 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgc 443 |||| |||||||||||||| ||||| | ||| |||||||| Sbjct: 20866836 catcgtcgacaccggcagcaacctcatctgggcgcagtgc 20866797
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggagtgcttcaacc 468 ||||||||||||||| |||||| |||||||||||| ||||||||| | |||||||||| Sbjct: 11398999 tcgacaccggcagcgtcctcgtctggacgcagtgccagccgtgcgctgtatgcttcaacc 11399058 Query: 469 ag 470 || Sbjct: 11399059 ag 11399060 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||||||||||||||||||| | |||||||||||| |||||||| Sbjct: 11437949 tcgacaccggcagcgacctcatctggacgcagtgccagccgtgc 11437992 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||||||||||||||||||| | |||||||||||| |||||||| Sbjct: 11419472 tcgacaccggcagcgacctcatctggacgcagtgccagccgtgc 11419515 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgc 443 |||| |||||||||||||||||||| | | |||||||||| Sbjct: 21420359 catcgtcgacaccggcagcgacctcatctagacgcagtgc 21420398 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtg 455 |||| |||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 11392587 catcctcgacaccggcagcgacctcacctggacacagtgcgcgccgtgcgtg 11392638 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 gcggagggcggcgaggcggagccgc 251 ||||| ||||||||||||||||||| Sbjct: 4124353 gcggaaggcggcgaggcggagccgc 4124377
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggagtgcttcaacc 468 ||||||||||||||| |||||| |||||||||||| ||||||||| | |||||||||| Sbjct: 110533 tcgacaccggcagcgtcctcgtctggacgcagtgccagccgtgcgctgtatgcttcaacc 110592 Query: 469 ag 470 || Sbjct: 110593 ag 110594 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||||||||||||||||||| | |||||||||||| |||||||| Sbjct: 149483 tcgacaccggcagcgacctcatctggacgcagtgccagccgtgc 149526 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||||||||||||||||||| | |||||||||||| |||||||| Sbjct: 131006 tcgacaccggcagcgacctcatctggacgcagtgccagccgtgc 131049 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtg 455 |||| |||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 104121 catcctcgacaccggcagcgacctcacctggacacagtgcgcgccgtgcgtg 104172
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 373 ccatcggcacgcccgcggtggcgtacgcggacatcatcgacaccggcagcgacctcgtgt 432 ||||||||||||| || | ||||| ||| |||| ||||||||||||||||||||| | Sbjct: 90134 ccatcggcacgccgccgcagtcgtacccggccatcgccgacaccggcagcgacctcgtct 90075 Query: 433 ggacgcagtgcaagccgtgcgtggag 458 ||||||||||| |||||||| |||| Sbjct: 90074 ggacgcagtgcgcgccgtgcggggag 90049 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgc 443 ||||||| |||||||||||| | |||||||||||| Sbjct: 85210 tcgacacgggcagcgacctcatctggacgcagtgc 85176 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 410 cgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||||||||||| |||||| | |||||||||||| ||||||| Sbjct: 42169 cgacaccggcagtgacctcatctggacgcagtgcgcgccgtgc 42211 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgc 443 |||| |||||||||||||| ||||| | ||| |||||||| Sbjct: 77626 catcgtcgacaccggcagcaacctcatctgggcgcagtgc 77587
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 373 ccatcggcacgcccgcggtggcgtacgcggacatcatcgacaccggcagcgacctcgtgt 432 ||||||||||||| || | ||||| ||| |||| ||||||||||||||||||||| | Sbjct: 7259 ccatcggcacgccgccgcagtcgtacccggccatcgccgacaccggcagcgacctcgtct 7200 Query: 433 ggacgcagtgcaagccgtgcgtggag 458 ||||||||||| |||||||| |||| Sbjct: 7199 ggacgcagtgcgcgccgtgcggggag 7174 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgc 443 ||||||| |||||||||||| | |||||||||||| Sbjct: 2335 tcgacacgggcagcgacctcatctggacgcagtgc 2301
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgacctcgtgtggacgcagtgc 443 ||||||||||||||||||||||||| |||||||||||| Sbjct: 24174739 tcatcgacaccggcagcgacctcgtctggacgcagtgc 24174776 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 3932064 tcgacaccggcagcgacctc 3932083
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgacctcgtgtggacgcagtgc 443 ||||||||||||||||||||||||| |||||||||||| Sbjct: 131224 tcatcgacaccggcagcgacctcgtctggacgcagtgc 131261
>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135793 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgacctcgtgtggacgcagtgc 443 ||||||||||||||||||||||||| |||||||||||| Sbjct: 23307 tcatcgacaccggcagcgacctcgtctggacgcagtgc 23344
>dbj|AK106440.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D09, full insert sequence Length = 1515 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||||||||||||||||||| | |||||||||||| |||||||| Sbjct: 426 tcgacaccggcagcgacctcatctggacgcagtgccagccgtgc 469
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgc 443 |||||||||||||||||||||| |||||||||||| Sbjct: 28058 tcgacaccggcagcgacctcgtctggacgcagtgc 28024
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgc 443 |||||||||||||||||||||| |||||||||||| Sbjct: 17992731 tcgacaccggcagcgacctcgtctggacgcagtgc 17992697
>dbj|AK064277.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-F07, full insert sequence Length = 1596 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 373 ccatcggcacgcccgcggtggcgtacgcggacatcatcgacaccggcagcgacctcgtgt 432 ||||||||||||| || | ||||| ||| |||| ||||||||||||||||| ||| | Sbjct: 334 ccatcggcacgccgccgcagtcgtacccggccatcgccgacaccggcagcgaccccgtct 393 Query: 433 ggacgcagtgcaagccgtgcgtggag 458 ||||||||||| |||||||| |||| Sbjct: 394 ggacgcagtgcgcgccgtgcggggag 419
>ref|XM_482871.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1298 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgcaagc 447 |||||||||||||||||| | |||||||||||||||| Sbjct: 93 gacaccggcagcgacctcatctggacgcagtgcaagc 129
>ref|XM_482870.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1347 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtg 455 |||||||||||||||||| | |||||||||||| |||||||||| Sbjct: 328 gacaccggcagcgacctcatctggacgcagtgcgcgccgtgcgtg 372 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 cacgtcgacgcgcacggcaactacacgaagctgcagct 223 ||||||||||| ||||||| |||||| |||||| |||| Sbjct: 100 cacgtcgacgcacacggcagctacaccaagctggagct 137
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 408 atcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 ||||||||||||||||||||| | |||||||||||| ||||||| Sbjct: 16915921 atcgacaccggcagcgacctcatctggacgcagtgcgcgccgtgc 16915965 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgc 443 |||||||||||||||||| | |||||||||||| Sbjct: 16923208 gacaccggcagcgacctcatctggacgcagtgc 16923240 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcg 453 ||||||||||||||||||| |||| |||||||||||| |||| Sbjct: 18479687 tcgacaccggcagcgacctgtcgtgggtgcagtgcaagccctgcg 18479731 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcg 453 ||||||||||||||||||| |||| |||||||||||| |||| Sbjct: 18468228 tcgacaccggcagcgacctgtcgtgggtgcagtgcaagccctgcg 18468272 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 21049025 tcgacaccggcagcgacctc 21049006
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgcaagc 447 |||||||||||||||||| | |||||||||||||||| Sbjct: 23062154 gacaccggcagcgacctcatctggacgcagtgcaagc 23062190 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtg 455 |||||||||||||||||| | |||||||||||| |||||||||| Sbjct: 23058720 gacaccggcagcgacctcatctggacgcagtgcgcgccgtgcgtg 23058764 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||| |||||||||||||||||||| ||| |||||||||||||||| Sbjct: 10184837 catcgtcgacaccggcagcgacctcacctgggtgcagtgcaagccgtgc 10184789 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 gccctgacgcacgtcgacgcgca 199 ||||||||||||||||||||||| Sbjct: 12263812 gccctgacgcacgtcgacgcgca 12263834 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 cacgtcgacgcgcacggcaactacacgaagctgcagct 223 ||||||||||| ||||||| |||||| |||||| |||| Sbjct: 23058492 cacgtcgacgcacacggcagctacaccaagctggagct 23058529
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 408 atcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 ||||||||||||||||||||| | |||||||||||| ||||||| Sbjct: 45734 atcgacaccggcagcgacctcatctggacgcagtgcgcgccgtgc 45778 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgc 443 |||||||||||||||||| | |||||||||||| Sbjct: 53021 gacaccggcagcgacctcatctggacgcagtgc 53053
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgcaagc 447 |||||||||||||||||| | |||||||||||||||| Sbjct: 121882 gacaccggcagcgacctcatctggacgcagtgcaagc 121918 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtg 455 |||||||||||||||||| | |||||||||||| |||||||||| Sbjct: 118448 gacaccggcagcgacctcatctggacgcagtgcgcgccgtgcgtg 118492 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 cacgtcgacgcgcacggcaactacacgaagctgcagct 223 ||||||||||| ||||||| |||||| |||||| |||| Sbjct: 118220 cacgtcgacgcacacggcagctacaccaagctggagct 118257
>dbj|AK108789.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-B04, full insert sequence Length = 1298 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgcaagc 447 |||||||||||||||||| | |||||||||||||||| Sbjct: 93 gacaccggcagcgacctcatctggacgcagtgcaagc 129
>dbj|AK063358.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C09, full insert sequence Length = 1492 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 408 atcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 ||||||||||||||||||||| | |||||||||||| ||||||| Sbjct: 393 atcgacaccggcagcgacctcatctggacgcagtgcgcgccgtgc 437
>ref|XM_462672.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1470 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagcc 448 |||||||||||||||||||| ||||||||||||| |||| Sbjct: 425 tcgacaccggcagcgacctctcgtggacgcagtgcgagcc 464
>ref|XM_473727.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1470 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagcc 448 |||||||||||||||||||| ||||||||||||| |||| Sbjct: 425 tcgacaccggcagcgacctctcgtggacgcagtgcgagcc 464
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence Length = 143157 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagcc 448 |||||||||||||||||||| ||||||||||||| |||| Sbjct: 88724 tcgacaccggcagcgacctctcgtggacgcagtgcgagcc 88763
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcg 453 |||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 11426183 tcatcgacaccggcagcgacctgtcgtgggtgcagtgcaagccgtgcg 11426230 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggagtgcttc 464 ||||||| || ||||| |||||||||||||||||| ||||||| |||| |||||| Sbjct: 5581074 tcgacacggggagcgatctcgtgtggacgcagtgcgcgccgtgcctggactgcttc 5581129 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 29994016 tcgacaccggcagcgacctc 29994035 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacct 427 |||| ||||||||||||||||||| Sbjct: 11398675 catcttcgacaccggcagcgacct 11398698
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcg 453 |||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 113892 tcatcgacaccggcagcgacctgtcgtgggtgcagtgcaagccgtgcg 113939 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacct 427 |||| ||||||||||||||||||| Sbjct: 86384 catcttcgacaccggcagcgacct 86407
>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0664C05 Length = 165354 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtggagtgcttc 464 ||||||| || ||||| |||||||||||||||||| ||||||| |||| |||||| Sbjct: 127982 tcgacacggggagcgatctcgtgtggacgcagtgcgcgccgtgcctggactgcttc 128037
>dbj|AK106907.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-A03, full insert sequence Length = 1557 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagcc 448 |||||||||||||||||||| ||||||||||||| |||| Sbjct: 373 tcgacaccggcagcgacctctcgtggacgcagtgcgagcc 412
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagcc 448 |||||||||||||||||||| ||||||||||||| |||| Sbjct: 6156 tcgacaccggcagcgacctctcgtggacgcagtgcgagcc 6195
>ref|XM_481142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||| |||||||||||||||||||| ||| |||||||||||||||| Sbjct: 534 catcgtcgacaccggcagcgacctcacctgggtgcagtgcaagccgtgc 582
>ref|NM_191796.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1341 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgacctcgt 430 ||||||||||||||||||||||||| Sbjct: 305 tcatcgacaccggcagcgacctcgt 329
>gb|BT018721.1| Zea mays clone EL01N0518B10.d mRNA sequence Length = 1429 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 410 cgacaccggcagcgacctcgtgtgg 434 ||||||||||||||||||||||||| Sbjct: 304 cgacaccggcagcgacctcgtgtgg 328
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06, complete sequence Length = 160129 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgca 444 |||| |||||||||||||| |||| || ||||||||||||| Sbjct: 89451 catcgtcgacaccggcagcaaccttgtctggacgcagtgca 89491
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 406 tcatcgacaccggcagcgacctcgt 430 ||||||||||||||||||||||||| Sbjct: 30010227 tcatcgacaccggcagcgacctcgt 30010203 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 410 cgacaccggcagcgacctcgtgtgg 434 |||||| |||||||||||||||||| Sbjct: 4080669 cgacacgggcagcgacctcgtgtgg 4080693 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgac 425 |||||||||||||||||||| Sbjct: 24015064 tcatcgacaccggcagcgac 24015083 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtgg 434 ||||||||||||||| |||||||| Sbjct: 23511640 gacaccggcagcgacgtcgtgtgg 23511663
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 406 tcatcgacaccggcagcgacctcgt 430 ||||||||||||||||||||||||| Sbjct: 6217 tcatcgacaccggcagcgacctcgt 6193
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||| |||||||||||||||||||| ||| |||||||||||||||| Sbjct: 144183 catcgtcgacaccggcagcgacctcacctgggtgcagtgcaagccgtgc 144135
>dbj|AK105952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D02, full insert sequence Length = 1449 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgc 443 |||||||||||||||||| | |||||||||||| Sbjct: 378 gacaccggcagcgacctcatctggacgcagtgc 410
>dbj|AK105097.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-B11, full insert sequence Length = 2569 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgc 452 |||| |||||||||||||||||||| ||| |||||||||||||||| Sbjct: 1424 catcgtcgacaccggcagcgacctcacctgggtgcagtgcaagccgtgc 1472
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgc 443 |||| |||||||||||||||||||| | | |||||||||| Sbjct: 120241 catcgtcgacaccggcagcgacctcatctagacgcagtgc 120280
>dbj|AK119465.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-A02, full insert sequence Length = 1497 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 404 catcatcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcgtg 455 |||| |||||||||||||||||||| ||||| |||||| |||||||||| Sbjct: 392 catcctcgacaccggcagcgacctcacctggacacagtgcgcgccgtgcgtg 443
>ref|NM_185835.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1420 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgc 443 ||||||| |||||||||||| | |||||||||||| Sbjct: 385 tcgacacgggcagcgacctcatctggacgcagtgc 419
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 gccctgacgcacgtcgacgcgca 199 ||||||||||||||||||||||| Sbjct: 130019 gccctgacgcacgtcgacgcgca 129997
>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0063H21 Length = 188058 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 gccctgacgcacgtcgacgcgca 199 ||||||||||||||||||||||| Sbjct: 137304 gccctgacgcacgtcgacgcgca 137326
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 gccctgacgcacgtcgacgcgca 199 ||||||||||||||||||||||| Sbjct: 22461 gccctgacgcacgtcgacgcgca 22483
>dbj|AK109794.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-E01, full insert sequence Length = 1532 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgc 443 ||||||| |||||||||||| | |||||||||||| Sbjct: 385 tcgacacgggcagcgacctcatctggacgcagtgc 419
>ref|XM_462659.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1395 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtggacgcagtgcaagcc 448 ||||||| |||||||||| | |||||||||||| |||| Sbjct: 319 gacaccgccagcgacctcatctggacgcagtgccagcc 356
>ref|XM_473315.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1560 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgt 430 |||||||||||||||||||||| Sbjct: 320 tcgacaccggcagcgacctcgt 341
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 catcgacaccggcagcgacctc 428 |||||||||||||||||||||| Sbjct: 50150 catcgacaccggcagcgacctc 50171 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 10600 tcgacaccggcagcgacctc 10619
>gb|AC105429.3| Homo sapiens chromosome 16 clone RP11-106D4, complete sequence Length = 160582 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 ggccctgcaggtgcctgtgcac 341 |||||||||||||||||||||| Sbjct: 138345 ggccctgcaggtgcctgtgcac 138366
>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11, complete sequence Length = 113677 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgt 430 |||||||||||||||||||||| Sbjct: 61602 tcgacaccggcagcgacctcgt 61623
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 catcgacaccggcagcgacctc 428 |||||||||||||||||||||| Sbjct: 4268640 catcgacaccggcagcgacctc 4268661 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 4229090 tcgacaccggcagcgacctc 4229109
>gb|AC010531.8| Homo sapiens chromosome 16 clone RP11-178L8, complete sequence Length = 175051 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 320 ggccctgcaggtgcctgtgcac 341 |||||||||||||||||||||| Sbjct: 95992 ggccctgcaggtgcctgtgcac 95971
>dbj|AK119767.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-E10, full insert sequence Length = 1823 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgt 430 |||||||||||||||||||||| Sbjct: 361 tcgacaccggcagcgacctcgt 382
>dbj|AK101505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F04, full insert sequence Length = 1808 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgt 430 |||||||||||||||||||||| Sbjct: 364 tcgacaccggcagcgacctcgt 385
>dbj|AK060585.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B02, full insert sequence Length = 1718 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgt 430 |||||||||||||||||||||| Sbjct: 363 tcgacaccggcagcgacctcgt 384
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 catcgacaccggcagcgacctc 428 |||||||||||||||||||||| Sbjct: 4277334 catcgacaccggcagcgacctc 4277355 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 4237784 tcgacaccggcagcgacctc 4237803
>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05, complete sequence Length = 173950 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgacct 427 |||||||||||||||||||||| Sbjct: 7524 tcatcgacaccggcagcgacct 7545
>emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061G20, complete sequence Length = 191218 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgacct 427 |||||||||||||||||||||| Sbjct: 185550 tcatcgacaccggcagcgacct 185571
>gb|AC172110.2| Rhesus Macaque CHR7 BAC CH250-119L7 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 219949 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 215 gctgcagctgctgcggagggcggcga 240 ||||||||||||||||||| |||||| Sbjct: 20908 gctgcagctgctgcggaggccggcga 20883
>ref|XM_550383.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1365 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 410 cgacaccggcagcgacctcgtgtgg 434 |||||| |||||||||||||||||| Sbjct: 354 cgacacgggcagcgacctcgtgtgg 378
>ref|XM_470527.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 gcggagggcggcgaggcggagccgc 251 ||||| ||||||||||||||||||| Sbjct: 117 gcggaaggcggcgaggcggagccgc 93
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcg 453 ||||||||||||||||||| |||| |||||||||||| |||| Sbjct: 7693 tcgacaccggcagcgacctgtcgtgggtgcagtgcaagccctgcg 7737
>gb|BC017335.2| Homo sapiens chromosome 9 open reading frame 112, mRNA (cDNA clone MGC:29782 IMAGE:4642600), complete cds Length = 1825 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gccctgcaggtgcctgtgcac 341 ||||||||||||||||||||| Sbjct: 1569 gccctgcaggtgcctgtgcac 1589
>gb|BC016349.1| Homo sapiens chromosome 9 open reading frame 112, mRNA (cDNA clone IMAGE:4071233), containing frame-shift errors Length = 1829 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gccctgcaggtgcctgtgcac 341 ||||||||||||||||||||| Sbjct: 1562 gccctgcaggtgcctgtgcac 1582
>ref|XM_758434.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0499) partial mRNA Length = 570 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cagcagctagcttcctcttct 30 ||||||||||||||||||||| Sbjct: 158 cagcagctagcttcctcttct 178
>emb|AL365502.57| Human DNA sequence from clone RP11-48C7 on chromosome 9q34.2-34.3 Contains the gene for nasal embryonic luteinizing hormone-releasing hormone factor (DKFZP586J1624), a novel gene (FLJ31318), the MRPL41 gene for mitochondrial ribosomal protein L41 (RPML27, MRP-L270), a novel gene (LOC9271), the gene for melanin-concentrating hormone receptor 1 interacting zinc-finger protein (ZMYND17) (MIZIP), a novel gene (MGC40555), a novel protein and eleven CpG islands, complete sequence Length = 174995 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 gccctgcaggtgcctgtgcac 341 ||||||||||||||||||||| Sbjct: 109847 gccctgcaggtgcctgtgcac 109827
>gb|BC040173.1| Homo sapiens chromosome 9 open reading frame 112, mRNA (cDNA clone MGC:41963 IMAGE:4791980), complete cds Length = 1325 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gccctgcaggtgcctgtgcac 341 ||||||||||||||||||||| Sbjct: 1072 gccctgcaggtgcctgtgcac 1092
>emb|CR621191.1| full-length cDNA clone CS0DL007YG18 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2006 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gccctgcaggtgcctgtgcac 341 ||||||||||||||||||||| Sbjct: 1818 gccctgcaggtgcctgtgcac 1838
>emb|CR609906.1| full-length cDNA clone CS0DD006YF10 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1716 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gccctgcaggtgcctgtgcac 341 ||||||||||||||||||||| Sbjct: 1509 gccctgcaggtgcctgtgcac 1529
>emb|CR597738.1| full-length cDNA clone CS0DC011YD02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1687 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gccctgcaggtgcctgtgcac 341 ||||||||||||||||||||| Sbjct: 1509 gccctgcaggtgcctgtgcac 1529
>emb|CR593908.1| full-length cDNA clone CS0DC006YP13 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1332 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gccctgcaggtgcctgtgcac 341 ||||||||||||||||||||| Sbjct: 1099 gccctgcaggtgcctgtgcac 1119
>emb|CR593031.1| full-length cDNA clone CS0DC027YO01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1755 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gccctgcaggtgcctgtgcac 341 ||||||||||||||||||||| Sbjct: 1547 gccctgcaggtgcctgtgcac 1567
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 410 cgacaccggcagcgacctcgtgtgg 434 |||||| |||||||||||||||||| Sbjct: 47412 cgacacgggcagcgacctcgtgtgg 47436
>gb|AY206771.1| Chlamydomonas reinhardtii flagella membrane glycoprotein 1A gene, complete cds Length = 24232 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 cgcgccggccctgcaggtgcctgtg 338 ||||| ||||||||||||||||||| Sbjct: 3197 cgcgctggccctgcaggtgcctgtg 3173
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 gcggagggcggcgaggcggagccgc 251 ||||| ||||||||||||||||||| Sbjct: 24881 gcggaaggcggcgaggcggagccgc 24905
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcg 453 ||||||||||||||||||| |||| |||||||||||| |||| Sbjct: 141561 tcgacaccggcagcgacctgtcgtgggtgcagtgcaagccctgcg 141605 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcg 453 ||||||||||||||||||| |||| |||||||||||| |||| Sbjct: 130102 tcgacaccggcagcgacctgtcgtgggtgcagtgcaagccctgcg 130146
>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502B12 Length = 197160 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 ggcggcgaggcggagccgccaccgc 257 ||||||||||||||||||| ||||| Sbjct: 164161 ggcggcgaggcggagccgcgaccgc 164137
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 410 cgacaccggcagcgacctcgtgtgg 434 |||||| |||||||||||||||||| Sbjct: 27640 cgacacgggcagcgacctcgtgtgg 27664
>dbj|AK109678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C05, full insert sequence Length = 1347 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 gcggagggcggcgaggcggagccgc 251 ||||| ||||||||||||||||||| Sbjct: 150 gcggaaggcggcgaggcggagccgc 126
>dbj|AK108029.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-B01, full insert sequence Length = 1723 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Minus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcg 453 ||||||||||||||||||| |||| |||||||||||| |||| Sbjct: 1357 tcgacaccggcagcgacctgtcgtgggtgcagtgcaagccctgcg 1313
>dbj|AK107495.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D07, full insert sequence Length = 1999 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 ggcggcgaggcggagccgccaccgc 257 ||||||||||||||||||| ||||| Sbjct: 76 ggcggcgaggcggagccgcgaccgc 52
>dbj|AK105666.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H10, full insert sequence Length = 1608 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctcgtgtggacgcagtgcaagccgtgcg 453 ||||||||||||||||||| |||| |||||||||||| |||| Sbjct: 584 tcgacaccggcagcgacctgtcgtgggtgcagtgcaagccctgcg 628
>emb|AJ420445.1|HSA420445 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1645612 Length = 1232 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gccctgcaggtgcctgtgcac 341 ||||||||||||||||||||| Sbjct: 969 gccctgcaggtgcctgtgcac 989
>ref|XM_465232.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1967 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 atcatcgacaccggcagcgacctc 428 ||||| |||||||||||||||||| Sbjct: 635 atcatggacaccggcagcgacctc 658
>ref|NM_197567.1| Oryza sativa (japonica cultivar-group) putative chloroplast nucleoid DNA binding protein (OSJNBa0025B05.4), mRNA Length = 1218 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 421 gcgacctcgtgtggacgcagtgcaagccgtgc 452 |||| ||||| ||||||||||||| ||||||| Sbjct: 233 gcgagctcgtctggacgcagtgcacgccgtgc 264
>ref|NM_197554.1| Oryza sativa (japonica cultivar-group) putative nucleoid DNA binding protein (OSJNBa0040D23.12), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 426 ctcgtgtggacgcagtgcaagccgtgcg 453 ||||| |||||||||||||||| ||||| Sbjct: 220 ctcgtctggacgcagtgcaagcagtgcg 247
>ref|NM_195627.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053D03.30), mRNA Length = 1257 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gaggcggagccgccaccgca 258 |||||||||||||||||||| Sbjct: 1043 gaggcggagccgccaccgca 1062
>ref|NM_192718.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1413 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgac 425 |||||||||||||||||||| Sbjct: 425 tcatcgacaccggcagcgac 444
>ref|XM_463388.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1503 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtgg 434 ||||||||||||||| |||||||| Sbjct: 493 gacaccggcagcgacgtcgtgtgg 516
>ref|XM_361441.1| Magnaporthe grisea 70-15 hypothetical protein (MG03915.4) partial mRNA Length = 786 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ggagggcggcgaggcggagc 248 |||||||||||||||||||| Sbjct: 459 ggagggcggcgaggcggagc 478
>ref|XM_618179.2| PREDICTED: Bos taurus similar to Fraser syndrome 1 isoform 1 (LOC537989), mRNA Length = 5019 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cccagctgggccgcctggag 164 |||||||||||||||||||| Sbjct: 4007 cccagctgggccgcctggag 4026
>emb|AL450309.14| Human DNA sequence from clone RP11-478H16 on chromosome 1 Contains the 5' end of the ERO1LB gene for ERO1-like beta (S. cerevisiae), an FK506 binding protein 3, 25kDa (FKBP3) pseudogene, the 5' UTR of a variant of the EDARADD gene for EDAR-associated death domain and three CpG islands, complete sequence Length = 166647 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gaggcggagccgccaccgca 258 |||||||||||||||||||| Sbjct: 121888 gaggcggagccgccaccgca 121869
>emb|AL158043.14| Human DNA sequence from clone RP11-5N23 on chromosome 10p14-15.3 Contains the 5' end of the PRKCQ gene for protein kinase C, theta, a novel gene and a CpG island, complete sequence Length = 132741 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ggagggcggcgaggcggagc 248 |||||||||||||||||||| Sbjct: 95043 ggagggcggcgaggcggagc 95062
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 cgcgccggccctgcaggtgc 333 |||||||||||||||||||| Sbjct: 72913 cgcgccggccctgcaggtgc 72932
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 cggcgtgccggtgatgtcga 303 |||||||||||||||||||| Sbjct: 1801665 cggcgtgccggtgatgtcga 1801684
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 421 gcgacctcgtgtggacgcagtgcaagccgtgc 452 |||| ||||| ||||||||||||| ||||||| Sbjct: 133202 gcgagctcgtctggacgcagtgcacgccgtgc 133233 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 426 ctcgtgtggacgcagtgcaagccgtgcg 453 ||||| |||||||||||||||| ||||| Sbjct: 78139 ctcgtctggacgcagtgcaagcagtgcg 78166
>gb|AC096782.6| Oryza sativa chromosome 10 BAC OSJNBa0025B05 genomic sequence, complete sequence Length = 14849 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 421 gcgacctcgtgtggacgcagtgcaagccgtgc 452 |||| ||||| ||||||||||||| ||||||| Sbjct: 11554 gcgagctcgtctggacgcagtgcacgccgtgc 11523
>gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0053D03, from chromosome 10, complete sequence Length = 199113 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gaggcggagccgccaccgca 258 |||||||||||||||||||| Sbjct: 161758 gaggcggagccgccaccgca 161777
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 74713 tcgacaccggcagcgacctc 74732
>ref|NM_069355.2| Caenorhabditis elegans W08D2.6 (collagen) mRNA, complete cds Length = 1123 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 gcgccggccctgcaggtgcctgtg 338 |||| ||||||||||||||||||| Sbjct: 385 gcgctggccctgcaggtgcctgtg 362
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 421 gcgacctcgtgtggacgcagtgcaagccgtgc 452 |||| ||||| ||||||||||||| ||||||| Sbjct: 20493054 gcgagctcgtctggacgcagtgcacgccgtgc 20493085 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 426 ctcgtgtggacgcagtgcaagccgtgcg 453 ||||| |||||||||||||||| ||||| Sbjct: 20437991 ctcgtctggacgcagtgcaagcagtgcg 20438018 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gaggcggagccgccaccgca 258 |||||||||||||||||||| Sbjct: 8094721 gaggcggagccgccaccgca 8094702
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gaggcggagccgccaccgca 258 |||||||||||||||||||| Sbjct: 23465372 gaggcggagccgccaccgca 23465391 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 atcatcgacaccggcagcgacctc 428 ||||| |||||||||||||||||| Sbjct: 12464161 atcatggacaccggcagcgacctc 12464184
>gb|AY787020.1| Gallus gallus RING finger protein 13 (RNF13) gene, complete cds Length = 33258 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tcgcgccggccctgcaggtg 332 |||||||||||||||||||| Sbjct: 5043 tcgcgccggccctgcaggtg 5062
>gb|AC010956.12|AC010956 Homo sapiens, clone RP11-5N23, complete sequence Length = 163805 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ggagggcggcgaggcggagc 248 |||||||||||||||||||| Sbjct: 126108 ggagggcggcgaggcggagc 126127
>ref|XM_217254.3| PREDICTED: Rattus norvegicus interferon-related developmental regulator 2 (predicted) (Ifrd2_predicted), mRNA Length = 1680 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ctggagggcctgcgcgtggccctg 182 |||||| ||||||||||||||||| Sbjct: 512 ctggagagcctgcgcgtggccctg 535
>gb|AY007155.1| Homo sapiens clone CDABP0095 mRNA sequence Length = 1026 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ggagggcggcgaggcggagc 248 |||||||||||||||||||| Sbjct: 30 ggagggcggcgaggcggagc 49
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 70164 tcgacaccggcagcgacctc 70183
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tcatcgacaccggcagcgac 425 |||||||||||||||||||| Sbjct: 129586 tcatcgacaccggcagcgac 129605
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtgg 434 ||||||||||||||| |||||||| Sbjct: 74945 gacaccggcagcgacgtcgtgtgg 74968
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 141114 tcgacaccggcagcgacctc 141095
>dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0705A04 Length = 182468 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 atcatcgacaccggcagcgacctc 428 ||||| |||||||||||||||||| Sbjct: 144298 atcatggacaccggcagcgacctc 144321
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gaggcggagccgccaccgca 258 |||||||||||||||||||| Sbjct: 31055 gaggcggagccgccaccgca 31074
>emb|AL672205.7| Mouse DNA sequence from clone RP23-149B17 on chromosome X, complete sequence Length = 220464 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gaaagcgaaaagaatggggg 60 |||||||||||||||||||| Sbjct: 64165 gaaagcgaaaagaatggggg 64146
>dbj|AK105001.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-D11, full insert sequence Length = 1840 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 304 tcgacaccggcagcgacctc 323
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gaggcggagccgccaccgca 258 |||||||||||||||||||| Sbjct: 84047 gaggcggagccgccaccgca 84066
>dbj|AK121147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078D21, full insert sequence Length = 1888 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 415 tcgacaccggcagcgacctc 434
>dbj|AK120968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040I01, full insert sequence Length = 1769 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtgg 434 ||||||||||||||| |||||||| Sbjct: 522 gacaccggcagcgacgtcgtgtgg 545
>dbj|AK111448.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-B07, full insert sequence Length = 1679 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gaggcggagccgccaccgca 258 |||||||||||||||||||| Sbjct: 235 gaggcggagccgccaccgca 216
>ref|XM_311294.2| Anopheles gambiae str. PEST ENSANGP00000017668 (ENSANGG00000015179), partial mRNA Length = 1050 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 gggccgcctggagggcctgc 171 |||||||||||||||||||| Sbjct: 52 gggccgcctggagggcctgc 33
>dbj|AK101038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000J20, full insert sequence Length = 1763 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 gacaccggcagcgacctcgtgtgg 434 ||||||||||||||| |||||||| Sbjct: 527 gacaccggcagcgacgtcgtgtgg 550
>dbj|AK068924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170E21, full insert sequence Length = 1967 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 atcatcgacaccggcagcgacctc 428 ||||| |||||||||||||||||| Sbjct: 635 atcatggacaccggcagcgacctc 658
>dbj|AK068348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146J21, full insert sequence Length = 1694 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 352 tcgacaccggcagcgacctc 371
>dbj|AK064771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A17, full insert sequence Length = 1820 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 288 tcgacaccggcagcgacctc 307
>dbj|AK061277.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F01, full insert sequence Length = 1404 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 426 ctcgtgtggacgcagtgcaagccgtgcg 453 ||||| |||||||||||||||| ||||| Sbjct: 282 ctcgtctggacgcagtgcaagcagtgcg 309
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 70325 tcgacaccggcagcgacctc 70306
>emb|Z70271.1|CEW08D2 Caenorhabditis elegans Cosmid W08D2, complete sequence Length = 30748 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 gcgccggccctgcaggtgcctgtg 338 |||| ||||||||||||||||||| Sbjct: 19285 gcgctggccctgcaggtgcctgtg 19262
>gb|AF061070.1|AF061070 Pseudomonas stutzeri Orf117 (orf117), Orf86 (orf86) genes, complete cds; and ptxABCDE operon, partial sequence Length = 5644 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 atgtcgagcaaggcggtcgc 316 |||||||||||||||||||| Sbjct: 5280 atgtcgagcaaggcggtcgc 5261
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 421 gcgacctcgtgtggacgcagtgcaagccgtgc 452 |||| ||||| ||||||||||||| ||||||| Sbjct: 20504326 gcgagctcgtctggacgcagtgcacgccgtgc 20504357 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 426 ctcgtgtggacgcagtgcaagccgtgcg 453 ||||| |||||||||||||||| ||||| Sbjct: 20449263 ctcgtctggacgcagtgcaagcagtgcg 20449290 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gaggcggagccgccaccgca 258 |||||||||||||||||||| Sbjct: 8099820 gaggcggagccgccaccgca 8099801
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcgacaccggcagcgacctc 428 |||||||||||||||||||| Sbjct: 94066 tcgacaccggcagcgacctc 94085 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,008,206 Number of Sequences: 3902068 Number of extensions: 3008206 Number of successful extensions: 76332 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74467 Number of HSP's gapped (non-prelim): 1861 length of query: 470 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 448 effective length of database: 17,147,199,772 effective search space: 7681945497856 effective search space used: 7681945497856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
