ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart20d09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130M12, full insert sequence Length = 1188 Score = 557 bits (281), Expect = e-155 Identities = 404/445 (90%) Strand = Plus / Plus Query: 139 gatgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcg 198 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 193 gatgttcctcacgaggacggagtacgaccgcggggtgaacaccttctccccggaggggcg 252 Query: 199 gctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgccatcggctt 258 | |||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| || Sbjct: 253 gttgttccaggtcgagtacgccattgaggccatcaagttggggtcaactgcgatcgggtt 312 Query: 259 gatgactaagtatggtgttgtcctggctgttgagaaacgcgtcacctcaccgctgctgga 318 || ||| ||| ||||||||||||| ||||| |||||||| || ||||| || |||||||| Sbjct: 313 gaagaccaaggatggtgttgtccttgctgtagagaaacgtgtgacctcgccactgctgga 372 Query: 319 acctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtgg 378 ||| ||||||||||||||||||||||||||||| ||||| | |||||||| |||||||| Sbjct: 373 accaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgagtgg 432 Query: 379 ccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcatag 438 |||||||||||| || |||||| | ||||||||||||||||| || || ||||||||||| Sbjct: 433 ccttattgctgatgctagaacattggttgagcatgctcgtgttgaaacccagaatcatag 492 Query: 439 gttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggc 498 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 493 gttctcatatggggagccaatgacagtagaatctactacacaagctatctgtgacttagc 552 Query: 499 tttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctcct 558 | |||| |||||||||||||||||||| || |||||||| || ||||| ||||||||||| Sbjct: 553 tctgcgttttggtgaaggtgatgaagagtcgatgtcacgaccatttggtgtctctctcct 612 Query: 559 tattgctggtcatgatgaaaatgga 583 |||||||||||||||||| |||||| Sbjct: 613 tattgctggtcatgatgagaatgga 637
>dbj|AK059521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C07, full insert sequence Length = 1056 Score = 557 bits (281), Expect = e-155 Identities = 404/445 (90%) Strand = Plus / Plus Query: 139 gatgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcg 198 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 88 gatgttcctcacgaggacggagtacgaccgcggggtgaacaccttctccccggaggggcg 147 Query: 199 gctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgccatcggctt 258 | |||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| || Sbjct: 148 gttgttccaggtcgagtacgccattgaggccatcaagttggggtcaactgcgatcgggtt 207 Query: 259 gatgactaagtatggtgttgtcctggctgttgagaaacgcgtcacctcaccgctgctgga 318 || ||| ||| ||||||||||||| ||||| |||||||| || ||||| || |||||||| Sbjct: 208 gaagaccaaggatggtgttgtccttgctgtagagaaacgtgtgacctcgccactgctgga 267 Query: 319 acctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtgg 378 ||| ||||||||||||||||||||||||||||| ||||| | |||||||| |||||||| Sbjct: 268 accaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgagtgg 327 Query: 379 ccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcatag 438 |||||||||||| || |||||| | ||||||||||||||||| || || ||||||||||| Sbjct: 328 ccttattgctgatgctagaacattggttgagcatgctcgtgttgaaacccagaatcatag 387 Query: 439 gttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggc 498 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 388 gttctcatatggggagccaatgacagtagaatctactacacaagctatctgtgacttagc 447 Query: 499 tttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctcct 558 | |||| |||||||||||||||||||| || |||||||| || ||||| ||||||||||| Sbjct: 448 tctgcgttttggtgaaggtgatgaagagtcgatgtcacgaccatttggtgtctctctcct 507 Query: 559 tattgctggtcatgatgaaaatgga 583 |||||||||||||||||| |||||| Sbjct: 508 tattgctggtcatgatgagaatgga 532
>dbj|AB026561.1| Oryza sativa (japonica cultivar-group) OsPAE1 mRNA for alpha 5 subunit of 20S proteasome, complete cds Length = 1056 Score = 557 bits (281), Expect = e-155 Identities = 404/445 (90%) Strand = Plus / Plus Query: 139 gatgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcg 198 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 93 gatgttcctcacgaggacggagtacgaccgcggggtgaacaccttctccccggaggggcg 152 Query: 199 gctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgccatcggctt 258 | |||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| || Sbjct: 153 gttgttccaggtcgagtacgccattgaggccatcaagttggggtcaactgcgatcgggtt 212 Query: 259 gatgactaagtatggtgttgtcctggctgttgagaaacgcgtcacctcaccgctgctgga 318 || ||| ||| ||||||||||||| ||||| |||||||| || ||||| || |||||||| Sbjct: 213 gaagaccaaggatggtgttgtccttgctgtagagaaacgtgtgacctcgccactgctgga 272 Query: 319 acctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtgg 378 ||| ||||||||||||||||||||||||||||| ||||| | |||||||| |||||||| Sbjct: 273 accaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgagtgg 332 Query: 379 ccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcatag 438 |||||||||||| || |||||| | ||||||||||||||||| || || ||||||||||| Sbjct: 333 ccttattgctgatgctagaacattggttgagcatgctcgtgttgaaacccagaatcatag 392 Query: 439 gttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggc 498 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 393 gttctcatatggggagccaatgacagtagaatctactacacaagctatctgtgacttagc 452 Query: 499 tttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctcct 558 | |||| |||||||||||||||||||| || |||||||| || ||||| ||||||||||| Sbjct: 453 tctgcgttttggtgaaggtgatgaagagtcgatgtcacgaccatttggtgtctctctcct 512 Query: 559 tattgctggtcatgatgaaaatgga 583 |||||||||||||||||| |||||| Sbjct: 513 tattgctggtcatgatgagaatgga 537
>gb|BT017253.1| Zea mays clone EL01N0307H03.c mRNA sequence Length = 1104 Score = 539 bits (272), Expect = e-150 Identities = 401/444 (90%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 197 atgtttctcacgaggacggagtacgaccgcggggtgaacaccttctcgccggaggggcgg 256 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgccatcggcttg 259 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 257 ctgttccaggtcgagtacgccatcgaggccatcaagttgggatccactgcgatcgggttg 316 Query: 260 atgactaagtatggtgttgtcctggctgttgagaaacgcgtcacctcaccgctgctggaa 319 | || ||| ||||||||||||| |||||||||||||| || ||||| || ||||||||| Sbjct: 317 aaaacaaaggatggtgttgtccttgctgttgagaaacgtgtgacctcgccactgctggaa 376 Query: 320 cctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggc 379 || ||||||||||| ||||||||||||||||||||||| | |||||||| |||||||| Sbjct: 377 ccaagcagtgtggaaaaaatcatggaaattgatgagcacataggctgtgccatgagtggg 436 Query: 380 cttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcatagg 439 ||||||||||| || |||||||| || |||||||||||||| || ||||||||||||||| Sbjct: 437 cttattgctgatgctagaacactagtcgagcatgctcgtgttgaaactcagaatcatagg 496 Query: 440 ttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggct 499 |||||||| |||||||||||||| ||||||||| | ||||||||||| |||||||| ||| Sbjct: 497 ttctcatacggggagccaatgaccgtagaatcttcaacacaagctatttgtgacttagct 556 Query: 500 ttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctcctt 559 |||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 557 ctgcgctttggcgaaggtgacgaagagtcaatgtcacggccatttggagtctctctccta 616 Query: 560 attgctggtcatgatgaaaatgga 583 |||||||| || ||||| |||||| Sbjct: 617 attgctggacacgatgagaatgga 640
>gb|BT019190.1| Zea mays clone Contig862.F mRNA sequence Length = 1161 Score = 531 bits (268), Expect = e-148 Identities = 406/452 (89%) Strand = Plus / Minus Query: 132 ccgacacgatgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccgg 191 |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1063 ccgacaggatgtttctcacgaggacggagtacgaccgtggggtgaacaccttctctccgg 1004 Query: 192 aggggcggctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgcca 251 ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| | Sbjct: 1003 aggggcggctgttcccggtcgagtacgccctcgaggccatcaagttgggatccactgcga 944 Query: 252 tcggcttgatgactaagtatggtgttgtcctggctgttgagaaacgcgtcacctcaccgc 311 |||| |||| ||| ||| ||||||||||||| || ||||||||||| || |||||||| | Sbjct: 943 tcggtttgaagacaaaggatggtgttgtcctcgccgttgagaaacgtgtgacctcacccc 884 Query: 312 tgctggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaa 371 |||||||||| ||||||||||| ||||| ||||||||||||||||| | |||||||| | Sbjct: 883 tgctggaaccaagcagtgtggaaaaaataatggaaattgatgagcacataggctgtgcca 824 Query: 372 tgagtggccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcaga 431 ||||||| ||||||||||| || |||||||| || || ||||||||||| || ||||||| Sbjct: 823 tgagtggacttattgctgatgctagaacactagtggaacatgctcgtgttgaaactcaga 764 Query: 432 atcataggttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtg 491 |||||||||||||||| || ||||||||||| ||||||||| | |||||||||||||||| Sbjct: 763 atcataggttctcatacggagagccaatgactgtagaatcttcgacacaagctatctgtg 704 Query: 492 acttggctttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtct 551 |||| ||| |||| ||||| |||||||| ||||| |||||||||||||| |||||||||| Sbjct: 703 acttagctctgcgttttggcgaaggtgacgaagagtcaatgtcacggccatttggagtct 644 Query: 552 ctctccttattgctggtcatgatgaaaatgga 583 ||||||| |||||||| |||||||| |||||| Sbjct: 643 ctctcctaattgctggacatgatgagaatgga 612
>gb|BT017580.1| Zea mays clone EL01N0429D12.c mRNA sequence Length = 1354 Score = 293 bits (148), Expect = 3e-76 Identities = 238/268 (88%) Strand = Plus / Plus Query: 316 ggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgag 375 |||||| ||||||||||| ||||| ||||||||||||||||| | |||||||| ||||| Sbjct: 583 ggaaccaagcagtgtggaaaaaataatggaaattgatgagcacataggctgtgccatgag 642 Query: 376 tggccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatca 435 ||| ||||||||||| || |||||||| || || ||||||||||| || ||||||||||| Sbjct: 643 tggacttattgctgatgctagaacactagtggaacatgctcgtgttgaaactcagaatca 702 Query: 436 taggttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtgactt 495 |||||||||||| || ||||||||||| ||||||||| | |||||||||||||||||||| Sbjct: 703 taggttctcatacggagagccaatgactgtagaatcttcgacacaagctatctgtgactt 762 Query: 496 ggctttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctct 555 ||| |||| ||||| |||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 763 agctctgcgttttggcgaaggtgacgaagagtcaatgtcacggccatttggagtctctct 822 Query: 556 ccttattgctggtcatgatgaaaatgga 583 ||| |||||||| |||||||| |||||| Sbjct: 823 cctaattgctggacatgatgagaatgga 850
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 280 bits (141), Expect = 5e-72 Identities = 186/201 (92%) Strand = Plus / Plus Query: 132 ccgacacgatgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccgg 191 |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 292 ccgacaggatgtttctcacgaggacggagtacgaccgtggggtgaacaccttctctccgg 351 Query: 192 aggggcggctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgcca 251 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 352 aggggcggctgttccaggtcgagtacgccatcgaggccatcaagttgggatccactgcga 411 Query: 252 tcggcttgatgactaagtatggtgttgtcctggctgttgagaaacgcgtcacctcaccgc 311 |||| |||| ||| ||| ||||||||||||| || ||||||||||| || |||||||| | Sbjct: 412 tcggtttgaagacaaaggatggtgttgtcctcgccgttgagaaacgtgtgacctcaccac 471 Query: 312 tgctggaacctagcagtgtgg 332 |||||||||| |||||||||| Sbjct: 472 tgctggaaccaagcagtgtgg 492 Score = 230 bits (116), Expect = 4e-57 Identities = 182/204 (89%) Strand = Plus / Plus Query: 380 cttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcatagg 439 ||||||||||| || |||||||| || || ||||||||||| || ||||||||||||||| Sbjct: 540 cttattgctgatgctagaacactagtggaacatgctcgtgttgaaactcagaatcatagg 599 Query: 440 ttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggct 499 |||||||| || ||||||||||| ||||||||| | |||||||||||||||||||| ||| Sbjct: 600 ttctcatacggagagccaatgactgtagaatcttcgacacaagctatctgtgacttagct 659 Query: 500 ttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctcctt 559 |||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 660 ctgcgttttggcgaaggtgacgaagagtcaatgtcacggccatttggagtctctctccta 719 Query: 560 attgctggtcatgatgaaaatgga 583 |||||||| |||||||| |||||| Sbjct: 720 attgctggacatgatgagaatgga 743
>gb|AF255338.1|AF255338 Glycine max 20S proteasome subunit mRNA, complete cds Length = 966 Score = 248 bits (125), Expect = 2e-62 Identities = 365/445 (82%) Strand = Plus / Plus Query: 139 gatgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcg 198 |||||||||||| ||||| ||||| ||||| || ||||||||||| || || || || || Sbjct: 13 gatgtttctcacaaggactgagtatgaccgaggagtcaacaccttttctcccgaaggccg 72 Query: 199 gctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgccatcggctt 258 |||| ||||| ||||| || ||||| ||||||||| |||| || ||||| || || || Sbjct: 73 tttgtttcaggttgagtatgcaatcgaagccatcaagctgggatcaactgcgattgggtt 132 Query: 259 gatgactaagtatggtgttgtcctggctgttgagaaacgcgtcacctcaccgctgctgga 318 || ||| || | || |||||||| || ||||| || ||| |||| || ||||| ||||| Sbjct: 133 gaagaccaaagaaggagttgtccttgcagttgaaaagcgcatcacatcgccgctcctgga 192 Query: 319 acctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtgg 378 ||||| ||||| |||||||| ||||||||||||||||| | || |||||||||||||| Sbjct: 193 gcctagtagtgttgagaaaattatggaaattgatgagcacatcggttgtgcaatgagtgg 252 Query: 379 ccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcatag 438 | ||||| || || ||||||||||||||||||| || || || ||||||||||| || Sbjct: 253 gttgattgcagatgctcgaacacttgttgagcatgcacgggtggaaactcagaatcacag 312 Query: 439 gttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggc 498 |||||| ||||| ||||| ||||| || || || ||||| |||||| | ||||| | || Sbjct: 313 gttctcctatggtgagcctatgactgttgagtccaccacccaagctctttgtgatctagc 372 Query: 499 tttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctcct 558 ||||| |||||||||||||||||||| || ||||| || || |||||||| |||||||| Sbjct: 373 cttgcgttttggtgaaggtgatgaagagtccatgtcccgaccatttggagtatctctcct 432 Query: 559 tattgctggtcatgatgaaaatgga 583 ||||||||||||||||| |||||| Sbjct: 433 cattgctggtcatgatgagaatgga 457
>ref|NM_104262.1| Arabidopsis thaliana PAE1; endopeptidase/ peptidase/ threonine endopeptidase AT1G53850 (PAE1) mRNA, complete cds Length = 1006 Score = 206 bits (104), Expect = 6e-50 Identities = 230/272 (84%) Strand = Plus / Plus Query: 312 tgctggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaa 371 |||||||||| |||||||||||||| || |||||||||||||| ||| |||| ||||| | Sbjct: 288 tgctggaaccgagcagtgtggagaagattatggaaattgatgaccatattggttgtgcta 347 Query: 372 tgagtggccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcaga 431 |||| || | ||||||||||| | |||||||||||||||||| | || || ||||| | Sbjct: 348 tgagcggtttaattgctgacgcgcgcacacttgttgagcatgctagagttgaaactcaaa 407 Query: 432 atcataggttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtg 491 | ||||| ||||| ||||| ||||| ||||| ||||| || || |||||||| | |||| Sbjct: 408 accatagattctcgtatggtgagccgatgactgtagagtccacaacacaagcactgtgtg 467 Query: 492 acttggctttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtct 551 | ||||||| || ||||||||||| || |||||||||||||| |||||||||||||| | Sbjct: 468 atctggctttacggtttggtgaaggagaggaagaatcaatgtctcggccgtttggagtat 527 Query: 552 ctctccttattgctggtcatgatgaaaatgga 583 |||| || |||||||| ||||||||||||||| Sbjct: 528 ctcttctcattgctggccatgatgaaaatgga 559
>gb|AY114616.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 869 Score = 206 bits (104), Expect = 6e-50 Identities = 230/272 (84%) Strand = Plus / Plus Query: 312 tgctggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaa 371 |||||||||| |||||||||||||| || |||||||||||||| ||| |||| ||||| | Sbjct: 173 tgctggaaccgagcagtgtggagaagattatggaaattgatgaccatattggttgtgcta 232 Query: 372 tgagtggccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcaga 431 |||| || | ||||||||||| | |||||||||||||||||| | || || ||||| | Sbjct: 233 tgagcggtttaattgctgacgcgcgcacacttgttgagcatgctagagttgaaactcaaa 292 Query: 432 atcataggttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtg 491 | ||||| ||||| ||||| ||||| ||||| ||||| || || |||||||| | |||| Sbjct: 293 accatagattctcgtatggtgagccgatgactgtagagtccacaacacaagcactgtgtg 352 Query: 492 acttggctttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtct 551 | ||||||| || ||||||||||| || |||||||||||||| |||||||||||||| | Sbjct: 353 atctggctttacggtttggtgaaggagaggaagaatcaatgtctcggccgtttggagtat 412 Query: 552 ctctccttattgctggtcatgatgaaaatgga 583 |||| || |||||||| ||||||||||||||| Sbjct: 413 ctcttctcattgctggccatgatgaaaatgga 444
>gb|AY072371.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 1003 Score = 206 bits (104), Expect = 6e-50 Identities = 230/272 (84%) Strand = Plus / Plus Query: 312 tgctggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaa 371 |||||||||| |||||||||||||| || |||||||||||||| ||| |||| ||||| | Sbjct: 286 tgctggaaccgagcagtgtggagaagattatggaaattgatgaccatattggttgtgcta 345 Query: 372 tgagtggccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcaga 431 |||| || | ||||||||||| | |||||||||||||||||| | || || ||||| | Sbjct: 346 tgagcggtttaattgctgacgcgcgcacacttgttgagcatgctagagttgaaactcaaa 405 Query: 432 atcataggttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtg 491 | ||||| ||||| ||||| ||||| ||||| ||||| || || |||||||| | |||| Sbjct: 406 accatagattctcgtatggtgagccgatgactgtagagtccacaacacaagcactgtgtg 465 Query: 492 acttggctttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtct 551 | ||||||| || ||||||||||| || |||||||||||||| |||||||||||||| | Sbjct: 466 atctggctttacggtttggtgaaggagaggaagaatcaatgtctcggccgtttggagtat 525 Query: 552 ctctccttattgctggtcatgatgaaaatgga 583 |||| || |||||||| ||||||||||||||| Sbjct: 526 ctcttctcattgctggccatgatgaaaatgga 557
>gb|AY086045.1| Arabidopsis thaliana clone 20801 mRNA, complete sequence Length = 1006 Score = 206 bits (104), Expect = 6e-50 Identities = 230/272 (84%) Strand = Plus / Plus Query: 312 tgctggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaa 371 |||||||||| |||||||||||||| || |||||||||||||| ||| |||| ||||| | Sbjct: 288 tgctggaaccgagcagtgtggagaagattatggaaattgatgaccatattggttgtgcta 347 Query: 372 tgagtggccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcaga 431 |||| || | ||||||||||| | |||||||||||||||||| | || || ||||| | Sbjct: 348 tgagcggtttaattgctgacgcgcgcacacttgttgagcatgctagagttgaaactcaaa 407 Query: 432 atcataggttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtg 491 | ||||| ||||| ||||| ||||| ||||| ||||| || || |||||||| | |||| Sbjct: 408 accatagattctcgtatggtgagccgatgactgtagagtccacaacacaagcactgtgtg 467 Query: 492 acttggctttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtct 551 | ||||||| || ||||||||||| || |||||||||||||| |||||||||||||| | Sbjct: 468 atctggctttacggtttggtgaaggagaggaagaatcaatgtctcggccgtttggagtat 527 Query: 552 ctctccttattgctggtcatgatgaaaatgga 583 |||| || |||||||| ||||||||||||||| Sbjct: 528 ctcttctcattgctggccatgatgaaaatgga 559
>gb|AF043524.1|AF043524 Arabidopsis thaliana 20S proteasome subunit PAE1 (PAE1) mRNA, complete cds Length = 1005 Score = 198 bits (100), Expect = 1e-47 Identities = 229/272 (84%) Strand = Plus / Plus Query: 312 tgctggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaa 371 |||||||||| |||||||||||||| || |||||||||||||| ||| |||| ||||| | Sbjct: 266 tgctggaaccgagcagtgtggagaagattatggaaattgatgaccatattggttgtgcta 325 Query: 372 tgagtggccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcaga 431 |||| || | ||||||||||| | |||||||||||||||||| | || || ||||| | Sbjct: 326 tgagcggtttaattgctgacgcgcgcacacttgttgagcatgctagagttgaaactcaaa 385 Query: 432 atcataggttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtg 491 | ||||| ||||| ||||| ||||| ||||| ||||| || || |||||||| | |||| Sbjct: 386 accatagattctcgtatggtgagccgatgactgtagagtccacaacacaagcactgtgtg 445 Query: 492 acttggctttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtct 551 | ||||||| || ||||||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 446 atctggctttacggtttggtgaaggagaggaagaatcaatgtctcggccgttcggagtat 505 Query: 552 ctctccttattgctggtcatgatgaaaatgga 583 |||| || |||||||| ||||||||||||||| Sbjct: 506 ctcttctcattgctggccatgatgaaaatgga 537
>ref|NM_112287.2| Arabidopsis thaliana PAE2; endopeptidase/ peptidase/ threonine endopeptidase AT3G14290 (PAE2) mRNA, complete cds Length = 1023 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 326 agtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttatt 385 ||||| ||||| || |||||||||||||| ||| | || ||||| |||||||| || ||| Sbjct: 291 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 350 Query: 386 gctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcataggttctca 445 |||||||| ||||||||||||||||||| || || ||||| ||||| || |||||||| Sbjct: 351 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 410 Query: 446 tatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggctttgcgc 505 ||||| ||||||||||| ||||||||||| ||||||||| | ||||| | ||||| || Sbjct: 411 tatggtgagccaatgactgtagaatctacaacacaagctttgtgtgatcttgctttacgg 470 Query: 506 tttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctccttattgct 565 ||||||||||| || ||||| |||||||| || || |||||||| || || || |||||| Sbjct: 471 tttggtgaaggagaggaagagtcaatgtctcgtccatttggagtatcccttctcattgct 530 Query: 566 ggtcatgatgaaaatgga 583 || ||||||||||||||| Sbjct: 531 gggcatgatgaaaatgga 548
>gb|AY062970.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 745 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 326 agtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttatt 385 ||||| ||||| || |||||||||||||| ||| | || ||||| |||||||| || ||| Sbjct: 187 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 246 Query: 386 gctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcataggttctca 445 |||||||| ||||||||||||||||||| || || ||||| ||||| || |||||||| Sbjct: 247 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 306 Query: 446 tatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggctttgcgc 505 ||||| ||||||||||| ||||||||||| ||||||||| | ||||| | ||||| || Sbjct: 307 tatggtgagccaatgactgtagaatctacaacacaagctttgtgtgatcttgctttacgg 366 Query: 506 tttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctccttattgct 565 ||||||||||| || ||||| |||||||| || || |||||||| || || || |||||| Sbjct: 367 tttggtgaaggagaggaagagtcaatgtctcgtccatttggagtatcccttctcattgct 426 Query: 566 ggtcatgatgaaaatgga 583 || ||||||||||||||| Sbjct: 427 gggcatgatgaaaatgga 444
>gb|AF370245.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 987 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 326 agtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttatt 385 ||||| ||||| || |||||||||||||| ||| | || ||||| |||||||| || ||| Sbjct: 290 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 349 Query: 386 gctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcataggttctca 445 |||||||| ||||||||||||||||||| || || ||||| ||||| || |||||||| Sbjct: 350 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 409 Query: 446 tatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggctttgcgc 505 ||||| ||||||||||| ||||||||||| ||||||||| | ||||| | ||||| || Sbjct: 410 tatggtgagccaatgactgtagaatctacaacacaagctttgtgtgatcttgctttacgg 469 Query: 506 tttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctccttattgct 565 ||||||||||| || ||||| |||||||| || || |||||||| || || || |||||| Sbjct: 470 tttggtgaaggagaggaagagtcaatgtctcgtccatttggagtatcccttctcattgct 529 Query: 566 ggtcatgatgaaaatgga 583 || ||||||||||||||| Sbjct: 530 gggcatgatgaaaatgga 547
>emb|BX823159.1|CNS0A658 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 326 agtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttatt 385 ||||| ||||| || |||||||||||||| ||| | || ||||| |||||||| || ||| Sbjct: 265 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 324 Query: 386 gctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcataggttctca 445 |||||||| ||||||||||||||||||| || || ||||| ||||| || |||||||| Sbjct: 325 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 384 Query: 446 tatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggctttgcgc 505 ||||| ||||||||||| ||||||||||| ||||||||| | ||||| | ||||| || Sbjct: 385 tatggtgagccaatgactgtagaatctacaacacaagctttgtgtgatcttgctttacgg 444 Query: 506 tttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctccttattgct 565 ||||||||||| || ||||| |||||||| || || |||||||| || || || |||||| Sbjct: 445 tttggtgaaggagaggaagagtcaatgtctcgtccatttggagtatcccttctcattgct 504 Query: 566 ggtcatgatgaaaatgga 583 || ||||||||||||||| Sbjct: 505 gggcatgatgaaaatgga 522
>emb|BX822992.1|CNS0A648 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 326 agtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttatt 385 ||||| ||||| || |||||||||||||| ||| | || ||||| |||||||| || ||| Sbjct: 225 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 284 Query: 386 gctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcataggttctca 445 |||||||| ||||||||||||||||||| || || ||||| ||||| || |||||||| Sbjct: 285 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 344 Query: 446 tatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggctttgcgc 505 ||||| ||||||||||| ||||||||||| ||||||||| | ||||| | ||||| || Sbjct: 345 tatggtgagccaatgactgtagaatctacaacacaagctttgtgtgatcttgctttacgg 404 Query: 506 tttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctccttattgct 565 ||||||||||| || ||||| |||||||| || || |||||||| || || || |||||| Sbjct: 405 tttggtgaaggagaggaagagtcaatgtctcgtccatttggagtatcccttctcattgct 464 Query: 566 ggtcatgatgaaaatgga 583 || ||||||||||||||| Sbjct: 465 gggcatgatgaaaatgga 482
>gb|AF043525.1|AF043525 Arabidopsis thaliana 20S proteasome subunit PAE2 (PAE2) mRNA, complete cds Length = 983 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 326 agtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttatt 385 ||||| ||||| || |||||||||||||| ||| | || ||||| |||||||| || ||| Sbjct: 229 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 288 Query: 386 gctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcataggttctca 445 |||||||| ||||||||||||||||||| || || ||||| ||||| || |||||||| Sbjct: 289 gctgacgcgcgaacacttgttgagcatgcacgagtagagacccagaaccacaggttctcg 348 Query: 446 tatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggctttgcgc 505 ||||| ||||||||||| ||||||||||| ||||||||| | ||||| | ||||| || Sbjct: 349 tatggtgagccaatgactgtagaatctacaacacaagctttgtgtgatcttgctttacgg 408 Query: 506 tttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctccttattgct 565 ||||||||||| || ||||| |||||||| || || |||||||| || || || |||||| Sbjct: 409 tttggtgaaggagaggaagagtcaatgtctcgtccatttggagtatcccttctcattgct 468 Query: 566 ggtcatgatgaaaatgga 583 || ||||||||||||||| Sbjct: 469 gggcatgatgaaaatgga 486
>gb|BT014224.1| Lycopersicon esculentum clone 133419F, mRNA sequence Length = 1119 Score = 192 bits (97), Expect = 9e-46 Identities = 289/353 (81%) Strand = Plus / Plus Query: 230 atcaagttgggctccactgccatcggcttgatgactaagtatggtgttgtcctggctgtt 289 ||||||||||| || ||||| || || |||| ||||||| | || ||||| || ||||| Sbjct: 156 atcaagttgggttcaactgcaattggattgaagactaaggaaggagttgttcttgctgtg 215 Query: 290 gagaaacgcgtcacctcaccgctgctggaacctagcagtgtggagaaaatcatggaaatt 349 ||||| ||| | || ||||| || ||||| || ||||||||||||||||| |||||||| Sbjct: 216 gagaagcgcattacttcaccacttctggagccaagcagtgtggagaaaattatggaaatc 275 Query: 350 gatgagcatgttggctgtgcaatgagtggccttattgctgacgccagaacacttgttgag 409 || |||||| ||||||||||||||||||| | || ||||| || |||||||||| || Sbjct: 276 gacgagcatattggctgtgcaatgagtggattgatagctgatgcacgaacacttgtggaa 335 Query: 410 catgctcgtgtcgagactcagaatcataggttctcatatggggagccaatgacagtagaa 469 ||||| || || || |||||||| ||||| ||||| ||||| ||||| ||||| || || Sbjct: 336 catgcacgggttgaaactcagaaccatagattctcttatggcgagcccatgactgttgag 395 Query: 470 tctaccacacaagctatctgtgacttggctttgcgctttggtgaaggtgatgaagaatca 529 || || || |||||| ||||||| ||||| ||||| |||||||| || ||||||||||| Sbjct: 396 tccactacccaagctctctgtgatttggcgttgcgatttggtgagggcgatgaagaatct 455 Query: 530 atgtcacggccgtttggagtctctctccttattgctggtcatgatgaaaatgg 582 ||||| |||| ||||| || || || || ||||||||||||||||| ||||| Sbjct: 456 atgtccaggccttttggtgtgtcccttctcattgctggtcatgatgagaatgg 508
>emb|BX822092.1|CNS0A644 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 844 Score = 180 bits (91), Expect = 3e-42 Identities = 218/259 (84%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 326 agtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttatt 385 ||||| ||||| || |||||||||||||| ||| | || ||||| |||||||| || ||| Sbjct: 210 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 269 Query: 386 gctgacgccagaacacttgttgagcatgctcgtgtcgagactc-agaatcataggttctc 444 |||||||| ||||||||||||||||||| || || ||||| | |||| || |||||||| Sbjct: 270 gctgacgcgcgaacacttgttgagcatgcacgagtagagaccccagaaccacaggttctc 329 Query: 445 atatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggctttgcg 504 ||||| ||||||||||| ||||||||||| ||||||||| | ||||| | ||||| || Sbjct: 330 gtatggtgagccaatgactgtagaatctacaacacaagctttgtgtgatcttgctttacg 389 Query: 505 ctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctccttattgc 564 ||||||||||| || ||||| |||||||| || || |||||||| || || || ||||| Sbjct: 390 gtttggtgaaggagaggaagagtcaatgtctcgtccatttggagtatcccttctcattgc 449 Query: 565 tggtcatgatgaaaatgga 583 ||| ||||||||||||||| Sbjct: 450 tgggcatgatgaaaatgga 468
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Minus Query: 427 tcagaatcataggttctcatatggggagccaatgacagtagaatctaccacacaagctat 486 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 102526 tcagaatcataggttctcatatggggagccaatgacagtagaatctactacacaagctat 102467 Query: 487 ctgtgacttggctttgcgctttggtgaaggtgatgaaga 525 ||||||||| ||| |||| |||||||||||||||||||| Sbjct: 102466 ctgtgacttagctctgcgttttggtgaaggtgatgaaga 102428 Score = 135 bits (68), Expect = 2e-28 Identities = 80/84 (95%) Strand = Plus / Minus Query: 152 aggacggagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtc 211 ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 104159 aggacggagtacgaccgcggggtgaacaccttctccccggaggggcggttgttccaggtc 104100 Query: 212 gagtacgccatcgaggccatcaag 235 ||||||||||| |||||||||||| Sbjct: 104099 gagtacgccattgaggccatcaag 104076 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 316 ggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgag 375 |||||| ||||||||||||||||||||||||||||| ||||| | |||||||| ||||| Sbjct: 102718 ggaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgag 102659 Query: 376 tggccttattgctgacgccagaacacttgttgagcatgctcgtgt 420 ||||||||||||||| || |||||| | ||||||||||||||||| Sbjct: 102658 tggccttattgctgatgctagaacattggttgagcatgctcgtgt 102614 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 532 gtcacggccgtttggagtctctctccttattgctggtcatgatgaaaatgga 583 |||||| || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 101957 gtcacgaccatttggtgtctctctccttattgctggtcatgatgagaatgga 101906 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 234 agttgggctccactgccatcggcttgatgactaagtatggtgttgtcctggctgttgaga 293 ||||||| || ||||| ||||| |||| ||| ||| ||||||||||||| ||||| |||| Sbjct: 103751 agttggggtcaactgcgatcgggttgaagaccaaggatggtgttgtccttgctgtagaga 103692 Query: 294 aacgcgtcacctcaccgctgctgg 317 |||| || ||||| || ||||||| Sbjct: 103691 aacgtgtgacctcgccactgctgg 103668
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Minus Query: 427 tcagaatcataggttctcatatggggagccaatgacagtagaatctaccacacaagctat 486 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23086523 tcagaatcataggttctcatatggggagccaatgacagtagaatctactacacaagctat 23086464 Query: 487 ctgtgacttggctttgcgctttggtgaaggtgatgaaga 525 ||||||||| ||| |||| |||||||||||||||||||| Sbjct: 23086463 ctgtgacttagctctgcgttttggtgaaggtgatgaaga 23086425 Score = 135 bits (68), Expect = 2e-28 Identities = 80/84 (95%) Strand = Plus / Minus Query: 152 aggacggagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtc 211 ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 23088156 aggacggagtacgaccgcggggtgaacaccttctccccggaggggcggttgttccaggtc 23088097 Query: 212 gagtacgccatcgaggccatcaag 235 ||||||||||| |||||||||||| Sbjct: 23088096 gagtacgccattgaggccatcaag 23088073 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 316 ggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgag 375 |||||| ||||||||||||||||||||||||||||| ||||| | |||||||| ||||| Sbjct: 23086715 ggaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgag 23086656 Query: 376 tggccttattgctgacgccagaacacttgttgagcatgctcgtgt 420 ||||||||||||||| || |||||| | ||||||||||||||||| Sbjct: 23086655 tggccttattgctgatgctagaacattggttgagcatgctcgtgt 23086611 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 532 gtcacggccgtttggagtctctctccttattgctggtcatgatgaaaatgga 583 |||||| || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 23085954 gtcacgaccatttggtgtctctctccttattgctggtcatgatgagaatgga 23085903 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 234 agttgggctccactgccatcggcttgatgactaagtatggtgttgtcctggctgttgaga 293 ||||||| || ||||| ||||| |||| ||| ||| ||||||||||||| ||||| |||| Sbjct: 23087748 agttggggtcaactgcgatcgggttgaagaccaaggatggtgttgtccttgctgtagaga 23087689 Query: 294 aacgcgtcacctcaccgctgctgg 317 |||| || ||||| || ||||||| Sbjct: 23087688 aacgtgtgacctcgccactgctgg 23087665 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 194 gggcggctgttccaggtcgagtacgccatcgaggccatcaag 235 ||||| ||||||||||||||||| ||||| |||| ||||||| Sbjct: 11307999 gggcgtctgttccaggtcgagtatgccattgaggtcatcaag 11308040 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ctcctctcctctctactagt 47 |||||||||||||||||||| Sbjct: 1270685 ctcctctcctctctactagt 1270704
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Minus Query: 427 tcagaatcataggttctcatatggggagccaatgacagtagaatctaccacacaagctat 486 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23396433 tcagaatcataggttctcatatggggagccaatgacagtagaatctactacacaagctat 23396374 Query: 487 ctgtgacttggctttgcgctttggtgaaggtgatgaaga 525 ||||||||| ||| |||| |||||||||||||||||||| Sbjct: 23396373 ctgtgacttagctctgcgttttggtgaaggtgatgaaga 23396335 Score = 135 bits (68), Expect = 2e-28 Identities = 80/84 (95%) Strand = Plus / Minus Query: 152 aggacggagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtc 211 ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 23398066 aggacggagtacgaccgcggggtgaacaccttctccccggaggggcggttgttccaggtc 23398007 Query: 212 gagtacgccatcgaggccatcaag 235 ||||||||||| |||||||||||| Sbjct: 23398006 gagtacgccattgaggccatcaag 23397983 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 316 ggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgag 375 |||||| ||||||||||||||||||||||||||||| ||||| | |||||||| ||||| Sbjct: 23396625 ggaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgag 23396566 Query: 376 tggccttattgctgacgccagaacacttgttgagcatgctcgtgt 420 ||||||||||||||| || |||||| | ||||||||||||||||| Sbjct: 23396565 tggccttattgctgatgctagaacattggttgagcatgctcgtgt 23396521 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 532 gtcacggccgtttggagtctctctccttattgctggtcatgatgaaaatgga 583 |||||| || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 23395864 gtcacgaccatttggtgtctctctccttattgctggtcatgatgagaatgga 23395813 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 234 agttgggctccactgccatcggcttgatgactaagtatggtgttgtcctggctgttgaga 293 ||||||| || ||||| ||||| |||| ||| ||| ||||||||||||| ||||| |||| Sbjct: 23397658 agttggggtcaactgcgatcgggttgaagaccaaggatggtgttgtccttgctgtagaga 23397599 Query: 294 aacgcgtcacctcaccgctgctgg 317 |||| || ||||| || ||||||| Sbjct: 23397598 aacgtgtgacctcgccactgctgg 23397575 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 194 gggcggctgttccaggtcgagtacgccatcgaggccatcaag 235 ||||| ||||||||||||||||| ||||| |||| ||||||| Sbjct: 11387188 gggcgtctgttccaggtcgagtatgccattgaggtcatcaag 11387229 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ctcctctcctctctactagt 47 |||||||||||||||||||| Sbjct: 1268406 ctcctctcctctctactagt 1268425
>emb|BX822457.1|CNS0A63I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 868 Score = 163 bits (82), Expect = 8e-37 Identities = 214/258 (82%) Strand = Plus / Plus Query: 326 agtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttatt 385 ||||| ||||| || |||||||||||||| ||| | || ||||| |||||||| || ||| Sbjct: 225 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 284 Query: 386 gctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatcataggttctca 445 |||||||| |||||||||| |||||||| || || ||||| ||||| || |||||||| Sbjct: 285 gctgacgcgcgaacacttgtagagcatgcacgagtagagacccagaaccacaggttctcg 344 Query: 446 tatggggagccaatgacagtagaatctaccacacaagctatctgtgacttggctttgcgc 505 ||||| |||||||| || ||||||||||| ||||||||| | |||| | ||||| || Sbjct: 345 tatggtgagccaattactgtagaatctacaacacaagctttgtgtgttcttgctttacgg 404 Query: 506 tttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctccttattgct 565 ||||||||||| || ||||| | |||||| || || |||||||| || || || |||||| Sbjct: 405 tttggtgaaggagaggaagagttaatgtctcgtccatttggagtatcccttctcattgct 464 Query: 566 ggtcatgatgaaaatgga 583 || ||||||||||||||| Sbjct: 465 gggcatgatgaaaatgga 482
>emb|AJ291735.1|NTA291735 Nicotiana tabacum partial mRNA for putative alpha5 proteasome subunit (a5 gene) Length = 315 Score = 147 bits (74), Expect = 5e-32 Identities = 245/302 (81%) Strand = Plus / Plus Query: 275 gttgtcctggctgttgagaaacgcgtcacctcaccgctgctggaacctagcagtgtggag 334 |||||||| || |||||||| || || ||||| || || ||||| || |||||||||||| Sbjct: 14 gttgtccttgcagttgagaagcgagttacctctccacttctggagccaagcagtgtggag 73 Query: 335 aaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttattgctgacgcc 394 ||||| |||||||||||||||||| |||||||||| |||||||| | || ||||| || Sbjct: 74 aaaattatggaaattgatgagcatattggctgtgcgatgagtggattgatagctgatgca 133 Query: 395 agaacacttgttgagcatgctcgtgtcgagactcagaatcataggttctcatatggggag 454 || || |||||||| ||||| || || || |||||||| || ||||| || ||||| ||| Sbjct: 134 aggactcttgttgaacatgcacgagttgaaactcagaaccacaggttttcttatggtgag 193 Query: 455 ccaatgacagtagaatctaccacacaagctatctgtgacttggctttgcgctttggtgaa 514 || ||||| || || || || ||||||||| | ||||| ||||| |||| ||||| || Sbjct: 194 cccatgactgttgagtccacaacacaagctctgtgtgatttggccctgcgatttggggag 253 Query: 515 ggtgatgaagaatcaatgtcacggccgtttggagtctctctccttattgctggtcatgat 574 ||||||||||| || ||||| | || ||||| || || || || |||||||| |||||| Sbjct: 254 ggtgatgaagagtctatgtccagaccttttggtgtatcacttctcattgctggccatgat 313 Query: 575 ga 576 || Sbjct: 314 ga 315
>emb|AJ418041.1|PPA418041 Physcomitrella patens mRNA for 20S proteasome subunit alpha V (zeta gene) Length = 952 Score = 115 bits (58), Expect = 2e-22 Identities = 211/262 (80%) Strand = Plus / Plus Query: 315 tggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatga 374 ||||||| | |||||| ||||| ||||||||||| ||||| ||| |||| ||||| |||| Sbjct: 256 tggaacccaccagtgtcgagaagatcatggaaatcgatgaacatattgggtgtgccatga 315 Query: 375 gtggccttattgctgacgccagaacacttgttgagcatgctcgtgtcgagactcagaatc 434 |||| || | ||| || || | ||||||||||| |||| ||||| || |||||||||| Sbjct: 316 gtggtctcactgcggatgctcgcacacttgttgaacatggccgtgtggaaactcagaatc 375 Query: 435 ataggttctcatatggggagccaatgacagtagaatctaccacacaagctatctgtgact 494 |||||||||| ||| ||||| |||| || || ||||| |||||||| | ||||| Sbjct: 376 ataggttctcgtataatgagcctatgagtgtggagtctactacacaagccctgtgtgatc 435 Query: 495 tggctttgcgctttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctc 554 ||||||| || ||||| ||| || ||||||||||||||||| || || ||||| |||| Sbjct: 436 tggctttacgttttggggaattcgacgaagaatcaatgtcacgtcctttcggagtttctc 495 Query: 555 tccttattgctggtcatgatga 576 | || |||||||| |||||||| Sbjct: 496 tgctcattgctggccatgatga 517
>dbj|AK220949.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-54-C04 Length = 543 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 506 tttggtgaaggtgatgaagaatcaatgtcacggccgtttggagtctctctccttattgct 565 ||||||||||| || |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 9 tttggtgaaggagaggaagaatcaatgtctcggccgtttggagtatctcttctcattgct 68 Query: 566 ggtcatgatgaaaatgga 583 || ||||||||||||||| Sbjct: 69 ggccatgatgaaaatgga 86
>emb|BX063332.1|CNS09L14 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC45AD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1010 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 112 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 171 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 172 gccatcgaggcgatcaaatttggctccaccgccatcggc 210
>emb|BX062751.1|CNS09KKZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC44AG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1022 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 16 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 75 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 76 gccatcgaggcgatcaaatttggctccaccgccatcggc 114
>emb|BX056699.1|CNS09FWV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC36AG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 901 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 100 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 159 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 160 gccatcgaggcgatcaaatttggctccaccgccatcggc 198
>emb|BX031436.1|CNS08WF4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46DE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 844 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 90 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 149 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 150 gccatcgaggcgatcaaatttggctccaccgccatcggc 188
>emb|BX019821.1|CNS08NGH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA3AH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 903 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 133 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 192 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 193 gccatcgaggcgatcaaatttggctccaccgccatcggc 231
>emb|BX017936.1|CNS08M04 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27AE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1005 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 107 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 166 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 167 gccatcgaggcgatcaaatttggctccaccgccatcggc 205
>emb|BX018241.1|CNS08M8L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27CF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 886 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 110 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 169 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 170 gccatcgaggcgatcaaatttggctccaccgccatcggc 208
>emb|BX015753.1|CNS08KBH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23CF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 319 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 94 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 153 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 154 gccatcgaggcgatcaaatttggctccaccgccatcggc 192
>emb|BX011882.1|CNS08HBY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA18DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1025 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 1025 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 966 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 965 gccatcgaggcgatcaaatttggctccaccgccatcggc 927
>emb|BX011202.1|CNS08GT2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17DF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 941 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 123 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 182 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 183 gccatcgaggcgatcaaatttggctccaccgccatcggc 221
>emb|BX010636.1|CNS08GDC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17AD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 971 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 129 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 188 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 189 gccatcgaggcgatcaaatttggctccaccgccatcggc 227
>emb|BX009604.1|CNS08FKO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15CB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 991 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 83 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 142 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 143 gccatcgaggcgatcaaatttggctccaccgccatcggc 181
>ref|XM_314945.2| Anopheles gambiae str. PEST ENSANGP00000019329 (ENSANGG00000016840), mRNA Length = 1160 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 132 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 191 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 192 gccatcgaggcgatcaaatttggctccaccgccatcggc 230
>gb|DQ214008.1| Taeniopygia guttata clone 0064P0007F03 proteasome alpha 5 subunit variant 1-like mRNA, complete sequence Length = 1055 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 ||||||||||| || || ||||| ||||| ||||||||| |||| |||||||| || || Sbjct: 136 gagtacgaccggggtgtgaacacgttctctccggaggggaggctcttccaggtggaatat 195 Query: 218 gccatcgaggccatcaagttgggctccactgccatcgg 255 |||||||||||||||||| | |||||||| |||||||| Sbjct: 196 gccatcgaggccatcaagcttggctccacagccatcgg 233
>ref|NM_001031407.1| Gallus gallus proteasome (prosome, macropain) subunit, alpha type, 5 (PSMA5), mRNA Length = 1047 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 |||||||||||| | | ||||||||||| || || ||||| ||||| ||||||||| || Sbjct: 105 atgtttctcacgcgctctgagtacgaccggggcgtgaacactttctctccggaggggagg 164 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgccatcggc 256 |||||||| || ||||| |||||||||||||| ||| | ||||| || ||||||||| Sbjct: 165 ctgttccaagtggagtatgccatcgaggccattaagctcggctctacggccatcggc 221
>emb|AJ720305.1| Gallus gallus mRNA for hypothetical protein, clone 14i9 Length = 1047 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 |||||||||||| | | ||||||||||| || || ||||| ||||| ||||||||| || Sbjct: 105 atgtttctcacgcgctctgagtacgaccggggcgtgaacactttctctccggaggggagg 164 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgccatcggc 256 |||||||| || ||||| |||||||||||||| ||| | ||||| || ||||||||| Sbjct: 165 ctgttccaagtggagtatgccatcgaggccattaagctcggctctacggccatcggc 221
>emb|CR386956.1| Gallus gallus finished cDNA, clone ChEST102f7 Length = 769 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 |||||||||||| | | ||||||||||| || || ||||| ||||| ||||||||| || Sbjct: 116 atgtttctcacgcgctctgagtacgaccggggcgtgaacactttctctccggaggggagg 175 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgccatcggc 256 |||||||| || ||||| |||||||||||||| ||| | ||||| || ||||||||| Sbjct: 176 ctgttccaagtggagtatgccatcgaggccattaagctcggctctacggccatcggc 232
>gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 genomic sequence, complete sequence Length = 85413 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Minus Query: 316 ggaacctagcagtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgag 375 |||||| |||||||||||||| || |||||||||||||| ||| |||| ||||| ||||| Sbjct: 40361 ggaaccgagcagtgtggagaagattatggaaattgatgaccatattggttgtgctatgag 40302 Query: 376 tggccttattgctgacgccagaacacttgttgagcatgct 415 || | ||||||||||| | |||||||||||||||||| Sbjct: 40301 cggtttaattgctgacgcgcgcacacttgttgagcatgct 40262 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 428 cagaatcataggttctcatatggggagccaatgacagtagaatctaccacacaagctatc 487 ||||| ||||| ||||| ||||| ||||| ||||| ||||| || || |||||||| | Sbjct: 40164 cagaaccatagattctcgtatggtgagccgatgactgtagagtccacaacacaagcactg 40105 Query: 488 tgtgacttggctttgcgctttggtgaaggtgatgaagaatcaatg 532 ||||| ||||||| || ||||||||||| || |||||||||||| Sbjct: 40104 tgtgatctggctttacggtttggtgaaggagaggaagaatcaatg 40060 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 536 cggccgtttggagtctctctccttattgctggtcatgatgaaaatgga 583 |||||||||||||| ||||| || |||||||| ||||||||||||||| Sbjct: 39943 cggccgtttggagtatctcttctcattgctggccatgatgaaaatgga 39896
>emb|BX066418.1|CNS09NEU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC5CH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 768 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || || || || ||||||||||| ||||| Sbjct: 19 gagtacgatcgtggagtgaacaccttctcgcccgatggtcgtctgttccaggttgagtat 78 Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 79 gccatcgaggcgatcaaatttggctccaccgccatcggc 117
>gb|DQ214009.1| Taeniopygia guttata clone 0061P0007F09 proteasome alpha 5 subunit variant 1-like mRNA, complete sequence Length = 1034 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 ||||||||||| || || ||||| ||||| ||||||||| | || |||||||| || || Sbjct: 116 gagtacgaccggggtgtgaacacgttctctccggaggggagactcttccaggtggaatat 175 Query: 218 gccatcgaggccatcaagttgggctccactgccatcgg 255 |||||||||||||||||| | |||||||| |||||||| Sbjct: 176 gccatcgaggccatcaagcttggctccacagccatcgg 213
>emb|BX011881.1|CNS08HBX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA18DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 902 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 77 gagtacgatcgtggagtgaacaccttctcgcccgagggtcgtctgttccaggttgagtat 136 Query: 218 gccatcgaggccatcaagttgggctccac 246 ||||||||||| ||||| || |||||||| Sbjct: 137 gccatcgaggcgatcaaatttggctccac 165
>emb|BX824071.1|CNS0A5L7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 428 cagaatcataggttctcatatggggagccaatgacagtagaatctaccacacaagctatc 487 ||||| || |||||||| ||||| ||||||||||| ||||||||||| ||||||||| | Sbjct: 605 cagaaccacaggttctcgtatggtgagccaatgactgtagaatctacaacacaagctttg 664 Query: 488 tgtgacttggctttgcgctttggtgaaggtgatgaagaatcaatg 532 ||||| | ||||| || ||||||||||| || ||||| |||||| Sbjct: 665 tgtgatcttgctttacggtttggtgaaggagaggaagagtcaatg 709 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 326 agtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttatt 385 ||||| ||||| || |||||||||||||| ||| | || ||||| |||||||| || ||| Sbjct: 409 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 468 Query: 386 gctgacgccagaacacttgttgagcatgc 414 |||||||| ||||||||||||||||||| Sbjct: 469 gctgacgcgcgaacacttgttgagcatgc 497 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 542 tttggagtctctctccttattgctggtcatgatgaaaatgga 583 |||||||| || || || |||||||| ||||||||||||||| Sbjct: 1030 tttggagtatcccttctcattgctgggcatgatgaaaatgga 1071
>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21 Length = 83906 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 428 cagaatcataggttctcatatggggagccaatgacagtagaatctaccacacaagctatc 487 ||||| || |||||||| ||||| ||||||||||| ||||||||||| ||||||||| | Sbjct: 29460 cagaaccacaggttctcgtatggtgagccaatgactgtagaatctacaacacaagctttg 29519 Query: 488 tgtgacttggctttgcgctttggtgaaggtgatgaagaatcaatg 532 ||||| | ||||| || ||||||||||| || ||||| |||||| Sbjct: 29520 tgtgatcttgctttacggtttggtgaaggagaggaagagtcaatg 29564 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 326 agtgtggagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggccttatt 385 ||||| ||||| || |||||||||||||| ||| | || ||||| |||||||| || ||| Sbjct: 29264 agtgttgagaagattatggaaattgatgaccatataggttgtgctatgagtggtctgatt 29323 Query: 386 gctgacgccagaacacttgttgagcatgc 414 |||||||| ||||||||||||||||||| Sbjct: 29324 gctgacgcgcgaacacttgttgagcatgc 29352 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 542 tttggagtctctctccttattgctggtcatgatgaaaatgga 583 |||||||| || || || |||||||| ||||||||||||||| Sbjct: 29885 tttggagtatcccttctcattgctgggcatgatgaaaatgga 29926
>ref|XM_956973.1| Neurospora crassa OR74A hypothetical protein (NCU05295.1) partial mRNA Length = 738 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 174 tcaacaccttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatca 233 |||||||||||||||| || || || || ||||| ||||||||| || |||||||||||| Sbjct: 35 tcaacaccttctcccccgaaggccgcctcttccaagtcgagtactccctcgaggccatca 94 Query: 234 agttgggctccactgccatcggc 256 || | |||||||| ||||||||| Sbjct: 95 agctcggctccaccgccatcggc 117
>ref|XM_324651.1| Neurospora crassa OR74A hypothetical protein (NCU05295.1) partial mRNA Length = 738 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 174 tcaacaccttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatca 233 |||||||||||||||| || || || || ||||| ||||||||| || |||||||||||| Sbjct: 35 tcaacaccttctcccccgaaggccgcctcttccaagtcgagtactccctcgaggccatca 94 Query: 234 agttgggctccactgccatcggc 256 || | |||||||| ||||||||| Sbjct: 95 agctcggctccaccgccatcggc 117
>gb|AY232148.1| Drosophila yakuba clone yak-ad_ProsMA5 mRNA sequence Length = 555 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 ||||||||| | || || ||||||||||| |||||||| || || ||||| || || ||| Sbjct: 19 gagtacgacagaggcgtgaacaccttctcgccggagggccgcctcttccaagtggaatac 78 Query: 218 gccatcgaggccatcaagttgggctccac 246 ||||| ||||||||||| ||||||||||| Sbjct: 79 gccattgaggccatcaaattgggctccac 107
>ref|XM_367205.1| Magnaporthe grisea 70-15 hypothetical protein (MG07130.4) partial mRNA Length = 738 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 161 tacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtacgcc 220 |||||||| || ||||||||||||||||||| || || || ||||||||||| ||| || Sbjct: 22 tacgaccggggtatcaacaccttctccccggaaggtcgtctcttccaggtcgaatactcc 81 Query: 221 atcgaggccatcaag 235 |||||||||||||| Sbjct: 82 ctcgaggccatcaag 96
>ref|XM_386335.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein (FG06159.1) partial mRNA Length = 732 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 174 tcaacaccttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatca 233 |||||||||||||||| || || || || ||||||||||| ||| | |||||||||||| Sbjct: 29 tcaacaccttctcccccgaaggccgtctcttccaggtcgaatactctctcgaggccatca 88 Query: 234 agttgggctccactgccatcggc 256 || | |||||||| ||||||||| Sbjct: 89 agctcggctccacggccatcggc 111
>ref|NM_166221.2| Drosophila melanogaster Proteasome subunit CG10938-RA, transcript variant A (ProsMA5), mRNA Length = 884 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 |||||||||||| | | ||||||||| | || || ||||||||||| |||||||| || Sbjct: 77 atgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagggccgc 136 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccac 246 || ||||| || || || ||||| ||||||||||| ||||||||||| Sbjct: 137 ctcttccaagtggaatatgccattgaggccatcaaattgggctccac 183
>ref|NM_057854.3| Drosophila melanogaster Proteasome subunit CG10938-RB, transcript variant B (ProsMA5), mRNA Length = 885 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 |||||||||||| | | ||||||||| | || || ||||||||||| |||||||| || Sbjct: 73 atgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagggccgc 132 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccac 246 || ||||| || || || ||||| ||||||||||| ||||||||||| Sbjct: 133 ctcttccaagtggaatatgccattgaggccatcaaattgggctccac 179
>gb|AY061404.1| Drosophila melanogaster LD33318 full length cDNA Length = 888 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 |||||||||||| | | ||||||||| | || || ||||||||||| |||||||| || Sbjct: 68 atgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagggccgc 127 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccac 246 || ||||| || || || ||||| ||||||||||| ||||||||||| Sbjct: 128 ctcttccaagtggaatatgccattgaggccatcaaattgggctccac 174
>gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54B-54B, BAC clone BACR28O12, complete sequence Length = 161244 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 |||||||||||| | | ||||||||| | || || ||||||||||| |||||||| || Sbjct: 127401 atgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagggccgc 127460 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccac 246 || ||||| || || || ||||| ||||||||||| ||||||||||| Sbjct: 127461 ctcttccaagtggaatatgccattgaggccatcaaattgggctccac 127507
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 |||||||||||| | | ||||||||| | || || ||||||||||| |||||||| || Sbjct: 4402 atgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagggccgc 4461 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccac 246 || ||||| || || || ||||| ||||||||||| ||||||||||| Sbjct: 4462 ctcttccaagtggaatatgccattgaggccatcaaattgggctccac 4508
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 |||||||||||| | | ||||||||| | || || ||||||||||| |||||||| || Sbjct: 147419 atgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagggccgc 147478 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccac 246 || ||||| || || || ||||| ||||||||||| ||||||||||| Sbjct: 147479 ctcttccaagtggaatatgccattgaggccatcaaattgggctccac 147525
>gb|U64721.1|DMU64721 Drosophila melanogaster 20S proteasome alpha subunit PSMA5 gene, complete cds Length = 1062 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 140 atgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcgg 199 |||||||||||| | | ||||||||| | || || ||||||||||| |||||||| || Sbjct: 146 atgtttctcacgcgttccgagtacgacagaggcgtgaacaccttctcgccggagggccgc 205 Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaagttgggctccac 246 || ||||| || || || ||||| ||||||||||| ||||||||||| Sbjct: 206 ctcttccaagtggaatatgccattgaggccatcaaattgggctccac 252
>dbj|AK099876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H14, full insert sequence Length = 1567 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 139 gatgtttctcacgaggacggagtacgaccgtggggtcaacaccttctccccggaggggcg 198 ||||||||||| ||||| |||||| ||||| ||| | | || ||||| | ||| ||||| Sbjct: 714 gatgtttctcatgaggatggagtaagaccgcgggttaaccattttctcactggacgggcg 773 Query: 199 gctgttccaggtcgagtacgccatcgaggccatcaag 235 ||||||||||||||||| ||||| |||| ||||||| Sbjct: 774 tctgttccaggtcgagtatgccattgaggtcatcaag 810
>gb|AY104937.1| Zea mays PCO082324 mRNA sequence Length = 1160 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 192 aggggcggctgttccaggtcgagtacgccatcgaggccatcaagttgggctcc 244 ||||||||||||||||||| ||||||||||| |||||| ||||| ||||||| Sbjct: 190 aggggcggctgttccaggtggagtacgccatggaggccgtcaagcagggctcc 242
>gb|BT017945.1| Zea mays clone EL01N0521D09.c mRNA sequence Length = 1171 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 192 aggggcggctgttccaggtcgagtacgccatcgaggccatcaag 235 ||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 160 aggggcggctgttccaggtggagtacgccatggaggccgtcaag 203
>ref|XM_464030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1079 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 187 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 229 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 136 cccggcggggcggctgttccaggtggagtacgccatggaggcc 178
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 187 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 229 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 1784747 cccggcggggcggctgttccaggtggagtacgccatggaggcc 1784789
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 187 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 229 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 102759 cccggcggggcggctgttccaggtggagtacgccatggaggcc 102801
>dbj|AK109376.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D06, full insert sequence Length = 1080 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 187 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 229 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 119 cccggcggggcggctgttccaggtggagtacgccatggaggcc 161
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585B01 Length = 133231 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 187 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 229 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 21391 cccggcggggcggctgttccaggtggagtacgccatggaggcc 21433
>dbj|AK103646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135B19, full insert sequence Length = 1079 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 187 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 229 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 136 cccggcggggcggctgttccaggtggagtacgccatggaggcc 178
>dbj|D37886.1|RICPC2SA Rice mRNA for proteasome C2 subunit, complete cds Length = 1045 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 187 cccggaggggcggctgttccaggtcgagtacgccatcgaggcc 229 ||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 121 cccggcggggcggctgttccaggtggagtacgccatggaggcc 163
>ref|XM_750383.1| Aspergillus fumigatus Af293 proteasome component Pup2 (Afu2g11440) partial mRNA Length = 753 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 164 gaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcga 213 |||||||| |||||||||||||||| || ||||| |||||||||||||| Sbjct: 37 gaccgtggaatcaacaccttctcccccgaagggcgcctgttccaggtcga 86
>emb|BX063333.1|CNS09L15 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC45AD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 984 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 203 ttccaggtcgagtacgccatcgaggccatcaagttgggctccactgccatcggc 256 |||||||| ||||| ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 982 ttccaggttgagtatgccatcgaggcgatcaaatttggctccaccgccatcggc 929
>gb|AF424643.1| Phytophthora infestans clone MY-03-E-06 proteasome subunit mRNA, complete cds Length = 911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 178 caccttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatcaa 234 ||||||||||||||| || || || |||||||| || |||||||| ||||||||||| Sbjct: 58 caccttctccccggaaggccgactcttccaggtggaatacgccatggaggccatcaa 114
>gb|AY431444.1| Aedes aegypti ASAP ID: 43014 proteasome endopeptidase mRNA sequence Length = 745 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 164 gaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtacgccatc 223 |||||||| |||||||||||||| || ||||| || || ||||| || || ||||||||| Sbjct: 78 gaccgtggtgtcaacaccttctcgccagagggccgactcttccaagtagaatacgccatc 137 Query: 224 gaggccat 231 || ||||| Sbjct: 138 gaagccat 145
>gb|DQ440413.1| Aedes aegypti clone AET-5533 20S proteasome regulatory subunit alpha type PSMA5/PUP2 mRNA, complete cds Length = 729 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 164 gaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtacgccatc 223 |||||||| |||||||||||||| || ||||| || || ||||| || || ||||||||| Sbjct: 25 gaccgtggtgtcaacaccttctcgccagagggccgactcttccaagtagaatacgccatc 84 Query: 224 gaggccat 231 || ||||| Sbjct: 85 gaagccat 92
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 194 gggcggctgttccaggtcgagtacgccatcgaggccatcaag 235 ||||| ||||||||||||||||| ||||| |||| ||||||| Sbjct: 94357 gggcgtctgttccaggtcgagtatgccattgaggtcatcaag 94398
>ref|XM_757040.1| Ustilago maydis 521 hypothetical protein (UM05986.1) partial mRNA Length = 753 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctccccggaggggcggctgttccaggtcgagtac 217 ||||| |||||||| |||||||| ||||| || ||||| || || || |||||||||||| Sbjct: 19 gagtatgaccgtggtgtcaacacattctcgcccgagggtcgtctctttcaggtcgagtac 78 Query: 218 gc 219 || Sbjct: 79 gc 80
>ref|XM_757288.1| Ustilago maydis 521 hypothetical protein (UM06234.1) partial mRNA Length = 918 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatcaa 234 |||||||||||| || ||||||| |||||||||||| ||| || |||| ||||| Sbjct: 36 cttctccccggacggacggctgtaccaggtcgagtatgccttcaaggcgatcaa 89
>emb|BX017937.1|CNS08M05 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA27AE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 976 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 212 gagtacgccatcgaggccatcaagttgggctccactgccatcggc 256 ||||| ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 974 gagtatgccatcgaggcgatcaaatttggctccaccgccatcggc 930
>ref|NM_185696.1| Oryza sativa (japonica cultivar-group), Ozsa8047 predicted mRNA Length = 753 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 33 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 80
>ref|NM_185686.1| Oryza sativa (japonica cultivar-group), Ozsa8037 predicted mRNA Length = 753 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 33 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 80
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 158 gagtacgaccgtggggtcaacaccttctcccc 189 ||||||||||| || ||||||||||||||||| Sbjct: 788558 gagtacgaccggggtgtcaacaccttctcccc 788527
>ref|XM_572324.1| Cryptococcus neoformans var. neoformans JEC21 proteasome subunit alpha type 5 (CNH01360) partial mRNA Length = 813 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 158 gagtacgaccgtggggtcaacaccttctcccc 189 ||||||||||| || ||||||||||||||||| Sbjct: 100 gagtacgaccggggtgtcaacaccttctcccc 131
>emb|X52319.1|DMPROS29 Fruit fly mRNA for proteosome subunit Length = 928 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 110 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 161
>ref|NM_057343.3| Drosophila melanogaster Proteasome 29kD subunit CG9327-RA (Pros29), mRNA Length = 971 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 122 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 173
>gb|AY084140.1| Drosophila melanogaster RE23862 full insert cDNA Length = 988 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 123 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 174
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagta 216 |||||| || ||||||||||||| |||||||||||| Sbjct: 539434 cttctcgcccgaggggcggctgtaccaggtcgagta 539469 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 200 ctgttccaggtcgagtacgccatcgaggccatcaag 235 ||||||||||| |||||||| | |||||||||||| Sbjct: 81784 ctgttccaggtggagtacgcgctagaggccatcaag 81819
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 3869188 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 3869235 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 3831132 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 3831179 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 3419617 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 3419664
>gb|AC007888.7|AC007888 Drosophila melanogaster, chromosome 2R, region 57B6-57B13, BAC clone BACR10P11, complete sequence Length = 164035 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 41009 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 40958
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 127142 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 127189 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 89086 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 89133
>ref|NM_211639.1| Eremothecium gossypii AGL089Wp (AGL089W), mRNA Length = 741 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagta 216 |||||| || ||||||||||||| |||||||||||| Sbjct: 36 cttctcgcccgaggggcggctgtaccaggtcgagta 71
>dbj|AK059984.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G05, full insert sequence Length = 1077 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 123 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 170
>gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60 of 73 of the complete sequence Length = 303438 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 210259 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 210310
>gb|AC005268.1|AC005268 Drosophila melanogaster DNA sequence (P1s DS03550 (D225) and DS02397 (D206)), complete sequence Length = 89791 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 |||||| |||||||| || ||| |||||| ||||||||||| ||||||||| Sbjct: 69470 cttctcgccggagggccgtttgtaccaggtggagtacgccatggaggccatc 69419
>dbj|AB026560.1| Oryza sativa (japonica cultivar-group) OsPAC1 mRNA for alpha 3 subunit of 20S proteasome, complete cds Length = 999 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| |||||||||||||| | |||||| |||||||| || ||||| Sbjct: 126 cttctcgccggaggggcggctctaccaggtggagtacgcgatggaggc 173
>gb|BT016493.1| Zea mays clone Contig326 mRNA sequence Length = 1011 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ttccaggtcgagtacgccatcgaggcc 229 |||||||||||||||||| |||||||| Sbjct: 107 ttccaggtcgagtacgccctcgaggcc 133
>emb|AJ293343.1|ZMA293343 Zea mays mRNA for maize 20S proteasome alpha subunit (paa gene) Length = 1040 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgc 219 ||||||||||||||| || |||| ||| ||||||||||| Sbjct: 126 cttctccccggagggacgcctgtaccaagtcgagtacgc 164
>emb|BX062752.1|CNS09KL0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC44AG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 970 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 218 gccatcgaggccatcaagttgggctccactgccatcggc 256 ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 969 gccatcgaggcgatcaaatttggctccaccgccatcggc 931
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ttccaggtcgagtacgccatcgaggcc 229 |||||||||||||||||| |||||||| Sbjct: 20870397 ttccaggtcgagtacgccctcgaggcc 20870423
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ttccaggtcgagtacgccatcgaggcc 229 |||||||||||||||||| |||||||| Sbjct: 62623 ttccaggtcgagtacgccctcgaggcc 62649
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ttccaggtcgagtacgccatcgaggcc 229 |||||||||||||||||| |||||||| Sbjct: 145426 ttccaggtcgagtacgccctcgaggcc 145452
>gb|AY107760.1| Zea mays PCO113667 mRNA sequence Length = 1128 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ttccaggtcgagtacgccatcgaggcc 229 |||||||||||||||||| |||||||| Sbjct: 138 ttccaggtcgagtacgccctcgaggcc 164
>gb|AY104377.1| Zea mays PCO108605 mRNA sequence Length = 1142 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgc 219 ||||||||||||||| || |||| ||| ||||||||||| Sbjct: 135 cttctccccggagggacgcctgtaccaagtcgagtacgc 173
>dbj|AB032061.1| Oryza sativa (japonica cultivar-group) OsPAD1 mRNA for alpha 4 subunit of 20S proteasome, complete cds Length = 1007 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ttccaggtcgagtacgccatcgaggcc 229 |||||||||||||||||| |||||||| Sbjct: 94 ttccaggtcgagtacgccctcgaggcc 120
>ref|XM_463746.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1434 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 acgccatcgaggccatcaagtt 237 |||||||||||||||||||||| Sbjct: 41 acgccatcgaggccatcaagtt 62
>ref|XM_817190.1| Trypanosoma brucei TREU927 proteasome subunit alpha 5 (Tb10.100.0120) partial mRNA Length = 741 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 tacgccatcgaggccatcaagttggg 240 |||||||||||||| ||||||||||| Sbjct: 76 tacgccatcgaggcaatcaagttggg 101
>gb|AC135114.4| Mus musculus BAC clone RP24-69H7 from chromosome 14, complete sequence Length = 181062 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 aaatagaaacaagggcttcaaa 115 |||||||||||||||||||||| Sbjct: 63081 aaatagaaacaagggcttcaaa 63102
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 acgccatcgaggccatcaagtt 237 |||||||||||||||||||||| Sbjct: 41879565 acgccatcgaggccatcaagtt 41879586 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 cgtctcctctcctctctact 44 |||||||||||||||||||| Sbjct: 43226716 cgtctcctctcctctctact 43226735
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 acgccatcgaggccatcaagtt 237 |||||||||||||||||||||| Sbjct: 122941 acgccatcgaggccatcaagtt 122962
>gb|AF210324.1|AF210324 Oryza sativa clone C26554 UMP synthase (UMPS1) mRNA, complete cds Length = 1750 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 acgccatcgaggccatcaagtt 237 |||||||||||||||||||||| Sbjct: 135 acgccatcgaggccatcaagtt 156
>gb|AF210323.1|AF210323 Oryza sativa clone C26785 UMP synthase (UMPS1) mRNA, complete cds Length = 1744 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 acgccatcgaggccatcaagtt 237 |||||||||||||||||||||| Sbjct: 125 acgccatcgaggccatcaagtt 146
>gb|AF140353.1|AF140353 Trypanosoma brucei brucei 20S proteasome alpha 5 subunit (alpha5) gene, complete cds Length = 741 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 tacgccatcgaggccatcaagttggg 240 |||||||||||||| ||||||||||| Sbjct: 76 tacgccatcgaggcaatcaagttggg 101
>dbj|AK069565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023L08, full insert sequence Length = 2085 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 acgccatcgaggccatcaagtt 237 |||||||||||||||||||||| Sbjct: 141 acgccatcgaggccatcaagtt 162
>dbj|AB031395.1| Oryza sativa (japonica cultivar-group) mRNA for UMP synthase 1, complete cds Length = 1743 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 acgccatcgaggccatcaagtt 237 |||||||||||||||||||||| Sbjct: 125 acgccatcgaggccatcaagtt 146
>gb|AE010335.1| Methanopyrus kandleri AV19 section 34 of 157 of the complete genome Length = 12939 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 187 cccggaggggcggctgttccaggtcgagtacgc 219 |||||| || || |||||||||||||||||||| Sbjct: 6573 cccggacggtcgactgttccaggtcgagtacgc 6541
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 ggaggggcggctgttccaggtcgag 214 |||||||||||||||| |||||||| Sbjct: 1659033 ggaggggcggctgttcgaggtcgag 1659009
>ref|XM_658384.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5872.2), mRNA Length = 741 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 156 cggagtacgaccgtggggtcaacaccttctccccgga 192 |||| ||||||||||| ||||||||||||| ||||| Sbjct: 17 cggaatacgaccgtggaatcaacaccttctctccgga 53
>ref|XM_804684.1| Trypanosoma cruzi strain CL Brener proteasome alpha 1 subunit (Tc00.1047053506167.40) partial mRNA Length = 798 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 197 cggctgttccaggtcgagtacgcca 221 |||||||||||||| |||||||||| Sbjct: 52 cggctgttccaggtagagtacgcca 76
>ref|XM_797774.1| Trypanosoma cruzi strain CL Brener proteasome alpha 7 subunit (Tc00.1047053507785.20) partial mRNA Length = 148 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 197 cggctgttccaggtcgagtacgcca 221 |||||||||||||| |||||||||| Sbjct: 52 cggctgttccaggtagagtacgcca 76
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gccatcgaggccatcaagttg 238 ||||||||||||||||||||| Sbjct: 2637618 gccatcgaggccatcaagttg 2637598
>emb|AL160290.15| Human DNA sequence from clone RP11-338O1 on chromosome 10 Contains a novel gene and the 5' end of a novel gene, complete sequence Length = 201397 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 cagtgtggagaaaatcatgga 345 ||||||||||||||||||||| Sbjct: 115538 cagtgtggagaaaatcatgga 115558
>ref|XM_963562.1| PREDICTED: Tribolium castaneum similar to proteasome (prosome, macropain) subunit, alpha type 6 (LOC657082), mRNA Length = 815 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 182 ttctccccggaggggcggctgttccaggtcgagtacgccatcgaggccatcaa 234 |||||||| ||||||||||| | ||| |||||||| ||| || | |||||||| Sbjct: 46 ttctcccccgaggggcggctctaccaagtcgagtatgccttcaaagccatcaa 98
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 205 ccaggtcgagtacgccatcgaggcc 229 ||||| ||||||||||||||||||| Sbjct: 60977 ccaggccgagtacgccatcgaggcc 60953
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ctcgccgccgtctcctctcctctct 41 |||||||||| |||||||||||||| Sbjct: 19780 ctcgccgccgcctcctctcctctct 19804
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ctcgccgccgtctcctctcctctct 41 |||||||||| |||||||||||||| Sbjct: 20916557 ctcgccgccgcctcctctcctctct 20916581
>gb|AY184356.1| Gasterosteus aculeatus proteasome subunit alpha 3 mRNA, partial cds Length = 283 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 178 caccttctccccggaggggcggctgttccaggtcgagtacgccat 222 ||||||||| || || ||||| |||||||||| ||||||||||| Sbjct: 82 caccttctctccagatgggcgcgtgttccaggtggagtacgccat 126
>gb|AC112259.4| Mus musculus BAC clone RP23-179F7 from 12, complete sequence Length = 190525 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 ctatctgtgacttggctttgc 503 ||||||||||||||||||||| Sbjct: 78008 ctatctgtgacttggctttgc 77988
>gb|U75302.1|TCU75302 Trypanosoma cruzi 29 kDa proteasome subunit class II (tcpr29B) mRNA, complete cds Length = 1155 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 197 cggctgttccaggtcgagtacgcca 221 |||||||||||||| |||||||||| Sbjct: 70 cggctgttccaggtagagtacgcca 94
>gb|U73851.1|TCU73851 Trypanosoma cruzi 29 kDa proteasome subunit TCPR29 (tcpr29) mRNA, complete cds Length = 1199 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 197 cggctgttccaggtcgagtacgcca 221 |||||||||||||| |||||||||| Sbjct: 98 cggctgttccaggtagagtacgcca 122
>dbj|AB045320.1| Homo sapiens genomic DNA, chromosome 10q25-q26, clone:423L12, complete sequence Length = 91826 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 cagtgtggagaaaatcatgga 345 ||||||||||||||||||||| Sbjct: 77264 cagtgtggagaaaatcatgga 77244
>ref|NM_105712.1| Arabidopsis thaliana SRO3 AT1G70440 (SRO3) mRNA, complete cds Length = 918 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 ttggtgaaggtgatgaagaa 526 |||||||||||||||||||| Sbjct: 473 ttggtgaaggtgatgaagaa 492
>gb|DQ088635.1| Tramitichromis intermedius putative green sensitive pigment gene, complete cds Length = 1626 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 528 tgttgtcctggctgttgaga 547
>gb|DQ088632.1| Tramitichromis intermedius putative green sensitive visual pigment gene, complete cds Length = 1576 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 498 tgttgtcctggctgttgaga 517
>gb|DQ088631.1| Melanochromis vermivorus putative green sensitive visual pigment gene, complete cds Length = 1579 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 501 tgttgtcctggctgttgaga 520
>gb|DQ088630.1| Pseudotropheus acei putative green sensitive visual pigment gene, complete cds Length = 1579 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 501 tgttgtcctggctgttgaga 520
>gb|DQ088651.1| Synthetic construct green sensitive visual pigment RH2Aalpha gene, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 408 tgttgtcctggctgttgaga 427
>ref|NM_185665.2| Oryza sativa (japonica cultivar-group), mRNA Length = 957 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 120 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 167
>ref|XM_514406.1| PREDICTED: Pan troglodytes similar to vacuolar protein sorting 13D (LOC457969), mRNA Length = 13179 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agtgtggagaaaatcatgga 345 |||||||||||||||||||| Sbjct: 7440 agtgtggagaaaatcatgga 7421
>gb|BT016358.1| Zea mays clone Contig191 mRNA sequence Length = 994 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 68 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 115
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence Length = 132292 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ctcgccgccgtctcctctcctctc 40 ||||||| |||||||||||||||| Sbjct: 5936 ctcgccgtcgtctcctctcctctc 5913
>gb|AF030453.1| Homo sapiens chromosome 7 clone PAC 76h2 map 7q22, complete sequence Length = 125108 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gggctccactgccatcggct 257 |||||||||||||||||||| Sbjct: 1480 gggctccactgccatcggct 1461
>gb|AF024533.1| Homo sapiens cosmid 123E15, complete sequence Length = 84912 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gggctccactgccatcggct 257 |||||||||||||||||||| Sbjct: 8880 gggctccactgccatcggct 8899
>gb|AC105169.9| Mus musculus chromosome 10, clone RP24-124K4, complete sequence Length = 167310 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 tcatggaaattgatgagcat 358 |||||||||||||||||||| Sbjct: 62144 tcatggaaattgatgagcat 62125
>ref|NM_148976.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1), transcript variant 1, mRNA Length = 1480 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 738 tctccttattgctggttatgatga 761
>ref|NM_002786.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1), transcript variant 2, mRNA Length = 1238 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 496 tctccttattgctggttatgatga 519
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ctcgccgccgtctcctctcctctc 40 ||||||| |||||||||||||||| Sbjct: 21501042 ctcgccgtcgtctcctctcctctc 21501019 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccgccgtctcctctcctctctact 44 |||||| ||||||||||||||||| Sbjct: 9760601 ccgccgcctcctctcctctctact 9760624 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tcgccgccgtctcctctcctctct 41 ||||| |||||||||||||||||| Sbjct: 6595130 tcgccaccgtctcctctcctctct 6595153
>gb|AY558511.1| Saccharomyces cerevisiae clone FLH003175.01X YGR253C gene, complete cds Length = 783 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 332 gagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggcctta 383 ||||||||| |||| |||||| ||| |||| |||||||||||||| |||| Sbjct: 193 gagaaaatcgtggagattgatcgtcatattggttgtgcaatgagtgggctta 244
>gb|AY728266.1| Trypanosoma cruzi voucher Dm28c zinc finger protein 7 (zinc7) gene, partial cds; and zinc finger protein 8 (zinc8), heavy chain clathrin (claH), and alpha6 proteasome subunit (pr29A) genes, complete cds Length = 14737 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 ggctgttccaggtcgagtacgcca 221 ||||||||||||| |||||||||| Sbjct: 13636 ggctgttccaggtagagtacgcca 13659
>gb|AF335503.1| Oryza sativa (japonica cultivar-group) hemoglobin 2 (hb2) gene, complete cds Length = 3793 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 tcgccgccgtctcctctcctctct 41 ||||| |||||||||||||||||| Sbjct: 107 tcgccaccgtctcctctcctctct 84
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tcgccgccgtctcctctcctctct 41 ||||| |||||||||||||||||| Sbjct: 137892 tcgccaccgtctcctctcctctct 137915
>emb|CR727970.2|CNS0GONC Tetraodon nigroviridis full-length cDNA Length = 989 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 165 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 212
>emb|CR727498.2|CNS0GOA8 Tetraodon nigroviridis full-length cDNA Length = 989 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 165 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 212
>emb|CR727201.2|CNS0GO1Z Tetraodon nigroviridis full-length cDNA Length = 973 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 150 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 197
>emb|CR725216.2|CNS0GMIU Tetraodon nigroviridis full-length cDNA Length = 959 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 135 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 182
>emb|CR705071.2|CNS0G6ZF Tetraodon nigroviridis full-length cDNA Length = 906 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 86 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 133
>emb|CR704698.2|CNS0G6P2 Tetraodon nigroviridis full-length cDNA Length = 993 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 171 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 218
>emb|CR700470.2|CNS0G3FM Tetraodon nigroviridis full-length cDNA Length = 970 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 148 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 195
>emb|CR699896.2|CNS0G2ZO Tetraodon nigroviridis full-length cDNA Length = 1002 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 171 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 218
>emb|CR698069.2|CNS0G1KX Tetraodon nigroviridis full-length cDNA Length = 968 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 146 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 193
>emb|CR697897.1|CNS0G1G5 Tetraodon nigroviridis full-length cDNA Length = 953 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 134 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 181
>emb|CR694814.2|CNS0FZ2I Tetraodon nigroviridis full-length cDNA Length = 978 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 157 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 204
>emb|CR692623.2|CNS0FXDN Tetraodon nigroviridis full-length cDNA Length = 972 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 158 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 205
>emb|CR685960.2|CNS0FS8K Tetraodon nigroviridis full-length cDNA Length = 993 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 171 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 218
>emb|CR688259.2|CNS0FU0F Tetraodon nigroviridis full-length cDNA Length = 967 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 143 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 190
>emb|CR688135.1|CNS0FTWZ Tetraodon nigroviridis full-length cDNA Length = 935 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 126 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 173
>emb|CR681238.2|CNS0FOLE Tetraodon nigroviridis full-length cDNA Length = 977 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 152 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 199
>emb|CR679103.2|CNS0FMY3 Tetraodon nigroviridis full-length cDNA Length = 1128 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 316 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 363
>emb|CR678237.2|CNS0FMA9 Tetraodon nigroviridis full-length cDNA Length = 997 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 170 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 217
>emb|CR677793.2|CNS0FLY1 Tetraodon nigroviridis full-length cDNA Length = 926 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 166 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 213
>emb|CR676703.2|CNS0FL3V Tetraodon nigroviridis full-length cDNA Length = 973 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 145 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 192
>emb|CR675798.2|CNS0FKF0 Tetraodon nigroviridis full-length cDNA Length = 1137 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 315 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 362
>emb|CR673260.2|CNS0FIGI Tetraodon nigroviridis full-length cDNA Length = 1018 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 199 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 246
>emb|CR672112.2|CNS0FHKM Tetraodon nigroviridis full-length cDNA Length = 982 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 157 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 204
>emb|CR672105.2|CNS0FHKF Tetraodon nigroviridis full-length cDNA Length = 1002 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 178 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 225
>emb|CR671749.2|CNS0FHAJ Tetraodon nigroviridis full-length cDNA Length = 978 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 167 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 214
>emb|CR671990.2|CNS0FHH8 Tetraodon nigroviridis full-length cDNA Length = 1156 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 329 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 376
>emb|CR671579.2|CNS0FH5T Tetraodon nigroviridis full-length cDNA Length = 1009 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 188 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 235
>emb|CR670122.2|CNS0FG1C Tetraodon nigroviridis full-length cDNA Length = 983 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 161 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 208
>emb|CR668423.2|CNS0FEQ5 Tetraodon nigroviridis full-length cDNA Length = 994 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 167 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 214
>emb|CR667949.2|CNS0FECZ Tetraodon nigroviridis full-length cDNA Length = 986 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 159 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 206
>emb|CR664328.2|CNS0FBKE Tetraodon nigroviridis full-length cDNA Length = 1099 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 277 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 324
>emb|CR661379.2|CNS0F9AH Tetraodon nigroviridis full-length cDNA Length = 983 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 170 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 217
>emb|CR658674.1|CNS0F77C Tetraodon nigroviridis full-length cDNA Length = 1019 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 238 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 285
>emb|CR646148.2|CNS0EXJE Tetraodon nigroviridis full-length cDNA Length = 966 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 tccccggaggggcggctgttccaggtcgagtacgccatcgaggccatc 232 ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct: 146 tccccagagggacggctgtatcaggtggagtacgccatggaagccatc 193
>gb|U40413.2| Caenorhabditis elegans cosmid C18B2, complete sequence Length = 30903 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 265 taagtatggtgttgtcctggctgttgag 292 |||| ||||| ||||||||||||||||| Sbjct: 2956 taaggatggtattgtcctggctgttgag 2983
>gb|DQ124327.1| Tribalister striatellus isolate extract MSC132 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 661 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 aatcatggaaattgatgagc 356 |||||||||||||||||||| Sbjct: 504 aatcatggaaattgatgagc 485
>emb|BX682532.4| Human DNA sequence from clone WI2-801539E12 on chromosome 1 Contains part of the VPS13D gene for vacuolar protein sorting 13D (yeast), complete sequence Length = 41821 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agtgtggagaaaatcatgga 345 |||||||||||||||||||| Sbjct: 6198 agtgtggagaaaatcatgga 6179
>ref|XM_501939.1| Yarrowia lipolytica CLIB122, YALI0C17325g predicted mRNA Length = 870 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 ttccaggtcgagtacgccatcgaggccatcaa 234 |||||||| ||||||||| | ||||||||||| Sbjct: 55 ttccaggtggagtacgcccttgaggccatcaa 86
>ref|NM_015378.2| Homo sapiens vacuolar protein sorting 13 homolog D (S. cerevisiae) (VPS13D), transcript variant 1, mRNA Length = 16341 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agtgtggagaaaatcatgga 345 |||||||||||||||||||| Sbjct: 7389 agtgtggagaaaatcatgga 7370
>ref|NM_018156.2| Homo sapiens vacuolar protein sorting 13 homolog D (S. cerevisiae) (VPS13D), transcript variant 2, mRNA Length = 16266 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agtgtggagaaaatcatgga 345 |||||||||||||||||||| Sbjct: 7389 agtgtggagaaaatcatgga 7370
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence Length = 147941 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctcctctcctctctactagt 47 |||||||||||||||||||| Sbjct: 119930 ctcctctcctctctactagt 119911
>ref|XM_961880.1| PREDICTED: Tribolium castaneum similar to proteasome (prosome, macropain) subunit, alpha type 1 (LOC655339), mRNA Length = 912 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 205 ccaggtcgagtacgccatcgaggccatcaagttgggctcc 244 |||||| ||||||||||| |||||| | || ||||||||| Sbjct: 138 ccaggtggagtacgccatggaggccgtaaatttgggctcc 177
>emb|X99228.1|SCCHRVII S.cerevisiae genomic sequence from chromosome VII Length = 10534 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 332 gagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggcctta 383 ||||||||| |||| |||||| ||| |||| |||||||||||||| |||| Sbjct: 1573 gagaaaatcgtggagattgatcgtcatattggttgtgcaatgagtgggctta 1522
>emb|X73293.1|MVRPO M.vannielii genes rpoH, rpoB and rpoA Length = 7960 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 ttggtgaaggtgatgaagaa 526 |||||||||||||||||||| Sbjct: 946 ttggtgaaggtgatgaagaa 965
>emb|X61969.1|HSMPNU H.sapiens mRNA for macropain subunit nu Length = 1244 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 498 tctccttattgctggttatgatga 521
>gb|AY993505.1| Uncultured bacterium clone C19_C20 16S ribosomal RNA gene, partial sequence Length = 1291 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gggcttcaaactccgatccg 125 |||||||||||||||||||| Sbjct: 1261 gggcttcaaactccgatccg 1242
>gb|AY990789.1| Uncultured bacterium clone C4_G011 16S ribosomal RNA gene, partial sequence Length = 1291 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gggcttcaaactccgatccg 125 |||||||||||||||||||| Sbjct: 1262 gggcttcaaactccgatccg 1243
>gb|BC022372.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:23915 IMAGE:4770620), complete cds Length = 1167 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 426 tctccttattgctggttatgatga 449
>gb|BC009576.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:14575 IMAGE:4105838), complete cds Length = 958 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 447 tctccttattgctggttatgatga 470
>gb|BC015105.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:22853 IMAGE:3950568), complete cds Length = 1218 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 473 tctccttattgctggttatgatga 496
>gb|BC015356.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:21459 IMAGE:3452219), complete cds Length = 1169 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 442 tctccttattgctggttatgatga 465
>gb|BC002577.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:1667 IMAGE:3140784), complete cds Length = 1219 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 458 tctccttattgctggttatgatga 481
>gb|BC008472.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:14751 IMAGE:4282076), complete cds Length = 1174 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 439 tctccttattgctggttatgatga 462
>gb|BC005932.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:14542 IMAGE:4078894), complete cds Length = 1215 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 474 tctccttattgctggttatgatga 497
>gb|BT008064.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 mRNA, partial cds Length = 792 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 393 tctccttattgctggttatgatga 416
>gb|BT006647.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 mRNA, complete cds Length = 792 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 393 tctccttattgctggttatgatga 416
>emb|X64918.1|SCPUP2A S.cerevisiae PUP2 gene Length = 1174 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 332 gagaaaatcatggaaattgatgagcatgttggctgtgcaatgagtggcctta 383 ||||||||| |||| |||||| ||| |||| |||||||||||||| |||| Sbjct: 427 gagaaaatcgtggagattgatcgtcatattggttgtgcaatgagtgggctta 478
>emb|AJ608775.1| Homo sapiens mRNA for VPS13D protein, transcript variant 2A (VPS13D gene) Length = 14559 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agtgtggagaaaatcatgga 345 |||||||||||||||||||| Sbjct: 7378 agtgtggagaaaatcatgga 7359
>emb|AJ608774.1| Homo sapiens mRNA for VPS13D protein, transcript variant 1A (VPS13D gene) Length = 14634 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agtgtggagaaaatcatgga 345 |||||||||||||||||||| Sbjct: 7378 agtgtggagaaaatcatgga 7359
>emb|CR623849.1| full-length cDNA clone CS0DA006YP22 of Neuroblastoma of Homo sapiens (human) Length = 1156 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 468 tctccttattgctggttatgatga 491
>dbj|AK125118.1| Homo sapiens cDNA FLJ43128 fis, clone CTONG3005325 Length = 4910 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agtgtggagaaaatcatgga 345 |||||||||||||||||||| Sbjct: 1136 agtgtggagaaaatcatgga 1117
>emb|CR620774.1| full-length cDNA clone CS0DI030YJ03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1146 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 431 tctccttattgctggttatgatga 454
>emb|CR617103.1| full-length cDNA clone CS0DI052YO22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1129 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 450 tctccttattgctggttatgatga 473
>emb|CR612800.1| full-length cDNA clone CS0DA012YD16 of Neuroblastoma of Homo sapiens (human) Length = 1218 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 528 tctccttattgctggttatgatga 551
>emb|CR610121.1| full-length cDNA clone CS0DI083YG05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1144 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 434 tctccttattgctggttatgatga 457
>emb|CR607472.1| full-length cDNA clone CS0DB001YP20 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1527 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 849 tctccttattgctggttatgatga 872
>emb|CR607412.1| full-length cDNA clone CS0DE014YI10 of Placenta of Homo sapiens (human) Length = 1165 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 457 tctccttattgctggttatgatga 480
>emb|CR599736.1| full-length cDNA clone CS0DK007YL19 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1105 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 391 tctccttattgctggttatgatga 414
>emb|CR599649.1| full-length cDNA clone CS0DI069YC24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1133 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 436 tctccttattgctggttatgatga 459
>emb|CR598938.1| full-length cDNA clone CS0DI075YJ10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1090 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 391 tctccttattgctggttatgatga 414
>emb|CR597642.1| full-length cDNA clone CL0BB027ZF05 of Neuroblastoma of Homo sapiens (human) Length = 1143 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 431 tctccttattgctggttatgatga 454
>dbj|AK001481.1| Homo sapiens cDNA FLJ10619 fis, clone NT2RP2005472 Length = 3989 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agtgtggagaaaatcatgga 345 |||||||||||||||||||| Sbjct: 526 agtgtggagaaaatcatgga 507
>gb|AF155766.1| Pisum sativum clone Psat27-29 repetitive sequence Length = 2089 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 tttggtgaaggtgatgaaga 525 |||||||||||||||||||| Sbjct: 2085 tttggtgaaggtgatgaaga 2066
>gb|DQ311211.1| Bombyx mori proteasome zeta subunit mRNA, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 198 ggctgttccaggtcgagtacgccatcgaggccatcaagttgggctccactgc 249 ||||||||||||| || |||||||| || || ||||| | ||||||||||| Sbjct: 189 ggctgttccaggtggaatacgccatagaagctatcaaacttggctccactgc 240
>gb|AF247124.1|AF247124 Oreochromis niloticus putative green sensitive opsin RH2 gene, complete cds Length = 1606 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 521 tgttgtcctggctgttgaga 540
>ref|NM_076219.3| Caenorhabditis elegans C18B2.4 (C18B2.4) mRNA, complete cds Length = 1037 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 265 taagtatggtgttgtcctggctgttgag 292 |||| ||||| ||||||||||||||||| Sbjct: 726 taaggatggtattgtcctggctgttgag 699
>emb|AL113369.1|CNS01ATD Botrytis cinerea strain T4 cDNA library Length = 720 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 479 caagctatctgtgacttggctttgcgctttggtgaaggtg 518 ||||| |||||||| ||||| ||| | ||||||||||||| Sbjct: 514 caagccatctgtgatttggccttgagatttggtgaaggtg 553
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| |||||||||||||| | |||||| ||||||| || ||||| Sbjct: 16677279 cttctcgccggaggggcggctctaccaggtgcagtacgcgatggaggc 16677326
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ctcgccgccgtctcctctcctctc 40 ||||||| |||||||||||||||| Sbjct: 21494071 ctcgccgtcgtctcctctcctctc 21494048 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccgccgtctcctctcctctctact 44 |||||| ||||||||||||||||| Sbjct: 9758722 ccgccgcctcctctcctctctact 9758745 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tcgccgccgtctcctctcctctct 41 ||||| |||||||||||||||||| Sbjct: 6594343 tcgccaccgtctcctctcctctct 6594366
>gb|AY775092.1| Lethrinops parvidens cone opsin (RH2) gene, complete cds Length = 1597 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 515 tgttgtcctggctgttgaga 534
>gb|AY775090.1| Aulonocara hueseri cone opsin (RH2) gene, complete cds Length = 1597 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 515 tgttgtcctggctgttgaga 534
>gb|AY775089.1| Tropheus duboisi cone opsin (RH2) gene, complete cds Length = 1569 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 515 tgttgtcctggctgttgaga 534
>gb|AY775070.1| Stigmatochromis modestus cone opsin (RH2) mRNA, complete cds Length = 1059 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 408 tgttgtcctggctgttgaga 427
>gb|AY775068.1| Neolamprologus brichardi cone opsin (RH2) mRNA, complete cds Length = 1169 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 428 tgttgtcctggctgttgaga 447
>gb|AY775067.1| Ophthalmotilapia ventralis cone opsin (RH2) mRNA, complete cds Length = 1171 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgttgtcctggctgttgaga 293 |||||||||||||||||||| Sbjct: 430 tgttgtcctggctgttgaga 449
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 cgtctcctctcctctctact 44 |||||||||||||||||||| Sbjct: 114171 cgtctcctctcctctctact 114190
>dbj|AP007260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone: OSJNOa275J08 Length = 36356 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 cgtctcctctcctctctact 44 |||||||||||||||||||| Sbjct: 791 cgtctcctctcctctctact 810
>gb|AC010967.3| Homo sapiens BAC clone RP11-7H13 from 2, complete sequence Length = 197328 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 cgtgtagaaatagaaacaag 106 |||||||||||||||||||| Sbjct: 7410 cgtgtagaaatagaaacaag 7391
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccgccgtctcctctcctctctact 44 |||||| ||||||||||||||||| Sbjct: 113896 ccgccgcctcctctcctctctact 113873
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 36321 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 36368
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| ||||||||||| || | |||||| |||||||| || ||||| Sbjct: 111171 cttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggc 111218
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 181 cttctccccggaggggcggctgttccaggtcgagtacgccatcgaggc 228 |||||| |||||||||||||| | |||||| ||||||| || ||||| Sbjct: 17191 cttctcgccggaggggcggctctaccaggtgcagtacgcgatggaggc 17238
>gb|AY892634.1| Synthetic construct Homo sapiens clone FLH015536.01L proteasome alpha type subunit 1 (PSMA1) mRNA, partial cds Length = 792 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 393 tctccttattgctggttatgatga 416
>gb|AY890152.1| Synthetic construct Homo sapiens clone FLH015541.01X proteasome subunit alpha type 1 (PSMA1) mRNA, complete cds Length = 792 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 393 tctccttattgctggttatgatga 416
>gb|AY890151.1| Synthetic construct Homo sapiens clone FLH015540.01X proteasome subunit alpha type 1 (PSMA1) mRNA, complete cds Length = 792 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 tctccttattgctggtcatgatga 576 |||||||||||||||| ||||||| Sbjct: 393 tctccttattgctggttatgatga 416
>emb|BX641035.1|HSM806688 Homo sapiens mRNA; cDNA DKFZp686D20110 (from clone DKFZp686D20110) Length = 8167 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agtgtggagaaaatcatgga 345 |||||||||||||||||||| Sbjct: 970 agtgtggagaaaatcatgga 951
>dbj|AK121300.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110L17, full insert sequence Length = 1767 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccgccgtctcctctcctctctact 44 |||||| ||||||||||||||||| Sbjct: 207 ccgccgcctcctctcctctctact 184 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,817,864 Number of Sequences: 3902068 Number of extensions: 4817864 Number of successful extensions: 177517 Number of sequences better than 10.0: 265 Number of HSP's better than 10.0 without gapping: 271 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 176183 Number of HSP's gapped (non-prelim): 1330 length of query: 583 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 560 effective length of database: 17,143,297,704 effective search space: 9600246714240 effective search space used: 9600246714240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
