ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart20d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor... 222 7e-58
2C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene ... 150 2e-36
3CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (... 147 2e-35
4CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor ... 143 4e-34
5C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene ... 140 3e-33
6C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene ... 121 1e-27
7C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene ... 119 6e-27
8SGS3_DROER (P13730) Salivary glue protein Sgs-3 precursor 35 0.15
9ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (V... 34 0.34
10HEM1_AGABI (Q92403) 5-aminolevulinate synthase, mitochondrial pr... 33 0.76
11YKR4_EBV (P30117) Hypothetical protein BKRF4 33 0.76
12SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1 32 0.99
13ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrop... 32 0.99
14JHD3B_MOUSE (Q91VY5) JmjC domain-containing histone demethylatio... 32 1.3
15MAP2_MOUSE (P20357) Microtubule-associated protein 2 (MAP 2) 31 2.9
16PARD3_HUMAN (Q8TEW0) Partitioning-defective 3 homolog (PARD-3) (... 31 2.9
17MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2) 31 2.9
18ATG1_MAGGR (Q52EB3) Serine/threonine-protein kinase ATG1 (EC 2.7... 30 4.9
19SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I) 30 4.9
20HR4_DROME (Q9W539) Hormone receptor 4 (dHR4) 30 4.9
21APOC4_MOUSE (Q61268) Apolipoprotein C-IV precursor (Apo-CIV) (Ap... 30 6.4
22IF2_CORJK (Q4JV51) Translation initiation factor IF-2 29 8.4
23IE18_PRVIF (P11675) Immediate-early protein IE180 29 8.4
24NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Si... 29 8.4
25GLXD_RHIME (O87392) Glutamate synthase large subunit-like protein 29 8.4
26GDF1_HUMAN (P27539) Embryonic growth/differentiation factor 1 pr... 29 8.4
27ERFB_EMENI (Q5B3W7) Palmitoyltransferase erf2 (EC 2.3.1.-) (DHHC... 29 8.4
28YE86_SCHPO (O14302) Hypothetical protein C9G1.06c in chromosome I 29 8.4
29PTPR2_MACNE (O02695) Receptor-type tyrosine-protein phosphatase ... 29 8.4

>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase 1) (Hydroperoxide dehydrase 1)
          Length = 512

 Score =  222 bits (565), Expect = 7e-58
 Identities = 111/151 (73%), Positives = 122/151 (80%), Gaps = 2/151 (1%)
 Frame = +2

Query: 131 MATAVHQLSFSAPXXXXXXXXXXXXXXXXXXXX--HEVLSPKRWLPLRKVPGEHGPPVLG 304
           MATA   +SF++P                       EV+SPKR LPLRKVPG++GPPV+G
Sbjct: 1   MATAAACISFASPSPARVVIRRQTRASASASATDRQEVVSPKRRLPLRKVPGDYGPPVVG 60

Query: 305 ALKDRLEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVAKDPRVVALLDAASFPVLF 484
           A++DR EYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVA+DPRVVALLDAASFPVLF
Sbjct: 61  AIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRVVALLDAASFPVLF 120

Query: 485 DTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577
           DTSLVDKTDLFTGTFMPST LTGGYRVLSY+
Sbjct: 121 DTSLVDKTDLFTGTFMPSTDLTGGYRVLSYL 151



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>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)|
           (Rubber particle protein) (RPP)
          Length = 473

 Score =  150 bits (380), Expect = 2e-36
 Identities = 68/106 (64%), Positives = 86/106 (81%)
 Frame = +2

Query: 260 PLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVAKDP 439
           PLR++PG +G P    +KDRLEYFYG GGRD +F +R++ ++STV R NMPPGPFV+ +P
Sbjct: 7   PLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNP 66

Query: 440 RVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577
           +V+ LLDA SFP+LFD S V+K DLFTGT+MPST LTG YRVLSY+
Sbjct: 67  KVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGAYRVLSYL 112



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>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 536

 Score =  147 bits (372), Expect = 2e-35
 Identities = 68/112 (60%), Positives = 91/112 (81%)
 Frame = +2

Query: 242 SPKRWLPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGP 421
           S +  LP+R++PG++G P +G ++DRL+YFY  G R+ FF +R++ ++STV R NMPPGP
Sbjct: 65  SDETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQG-REEFFKSRLQKYKSTVYRANMPPGP 123

Query: 422 FVAKDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577
           F+A +PRV+ LLDA SFPVLFD S V+K DLFTGT+MPST LTGGYR+LSY+
Sbjct: 124 FIASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRILSYL 175



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>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 518

 Score =  143 bits (360), Expect = 4e-34
 Identities = 65/107 (60%), Positives = 85/107 (79%)
 Frame = +2

Query: 257 LPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVAKD 436
           LP+R +PG +G P++G +KDR +YFY  G  + FF +R+R + STV R+NMPPG F+A++
Sbjct: 52  LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEE-FFKSRIRKYNSTVYRVNMPPGAFIAEN 110

Query: 437 PRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577
           P+VVALLD  SFPVLFD   V+K DLFTGT+MPST LTGGYR+LSY+
Sbjct: 111 PQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYL 157



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>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase|
           2) (Hydroperoxide dehydrase 2)
          Length = 478

 Score =  140 bits (352), Expect = 3e-33
 Identities = 66/107 (61%), Positives = 86/107 (80%)
 Frame = +2

Query: 257 LPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVAKD 436
           LP R VPG +G P + A++DRL+++Y  G +D +F +R   + STVVR+N+PPGPF+A+D
Sbjct: 7   LPRRPVPGSYGVPFVSAVRDRLDFYYLQG-QDKYFESRAERYGSTVVRINVPPGPFMARD 65

Query: 437 PRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577
           PRVVALLDA SFPVLFD + V+K D+FTGTFMPST LTGGYRV +Y+
Sbjct: 66  PRVVALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYL 112



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>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase|
           4) (Hydroperoxide dehydrase 4)
          Length = 510

 Score =  121 bits (304), Expect = 1e-27
 Identities = 65/114 (57%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
 Frame = +2

Query: 239 LSPKRWLPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHR-STVVRLNMPP 415
           LSP   L +R++PG +G P L  L+DRL+Y+Y  G  D FF +RV  H  +TV+R+NMPP
Sbjct: 22  LSPSGLL-IREIPGGYGVPFLSPLRDRLDYYYFQGA-DEFFRSRVARHGGATVLRVNMPP 79

Query: 416 GPFVAKDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577
           GPF+A DPRVVALLDA SF VL D S+VDK D   GTFMPS  L GG+R L+++
Sbjct: 80  GPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLAFL 133



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>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase|
           3) (Hydroperoxide dehydrase 3)
          Length = 500

 Score =  119 bits (298), Expect = 6e-27
 Identities = 61/114 (53%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
 Frame = +2

Query: 239 LSPKRWLPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHR-STVVRLNMPP 415
           LSP   LP+R++PG +G P    L+DRL+YFY  G  + +F +RV  H  +TV+R+NMPP
Sbjct: 22  LSPSG-LPIREIPGGYGVPFFSPLRDRLDYFYFQGAEE-YFRSRVARHGGATVLRVNMPP 79

Query: 416 GPFVAKDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577
           GPF++ +PRVVALLDA SF VL D S+VDK D   GT+MPS  L GG+R L+++
Sbjct: 80  GPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFL 133



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>SGS3_DROER (P13730) Salivary glue protein Sgs-3 precursor|
          Length = 328

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 26/98 (26%), Positives = 41/98 (41%)
 Frame = -2

Query: 567 STR*PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTV 388
           +T+  P + V   + P KR+    +   + T K A ++ ATT+     + P    +R T 
Sbjct: 207 TTKRAPTKRVTTKRAPTKRATTKRAPTKRATTKRAPTKRATTK-----RAP---TKRATT 258

Query: 387 ERCARTRAAKKPSRPPGP*KYSRRSLSAPSTGGPCSPG 274
           +R    RA  K        + + R  S P    PC PG
Sbjct: 259 KRAPTKRATTK--------RATARPTSKPCGCKPCGPG 288



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>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
 Frame = -2

Query: 555 PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERC- 379
           PP  PV+  + P  R   + ++   ++   A +  A   G    +G  G+ R T      
Sbjct: 442 PPAVPVDAHRAPRSRMTQAQTDTQAQSLGRAGATDARGSGGPGAEGGPGVPRGTNTPGAA 501

Query: 378 --ARTRAAKKPSRPPGP*KYSRRSLSAPSTGGPCSP------GTLRSGSHRFGDSTS 232
             A   AA +P +  G       S SA S+  P SP      G  R+   R  DS S
Sbjct: 502 PHAAEGAAARPRKRRGSDSGPAASSSASSSAAPRSPLAPQGVGAKRAAPRRAPDSDS 558



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>HEM1_AGABI (Q92403) 5-aminolevulinate synthase, mitochondrial precursor (EC|
           2.3.1.37) (5-aminolevulinic acid synthase)
           (Delta-aminolevulinate synthase) (Delta-ALA synthetase)
          Length = 621

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = +2

Query: 395 VRLNMPPGPFVAKDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGY 559
           V L  P G  VA+     A L A S P     S++D+ D+ TGT   S G  GGY
Sbjct: 316 VGLYGPRGAGVAEHLDYDAHLAAGSSPDPIPGSVMDRIDIITGTLGKSYGAVGGY 370



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>YKR4_EBV (P30117) Hypothetical protein BKRF4|
          Length = 217

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 28/84 (33%), Positives = 37/84 (44%)
 Frame = -2

Query: 501 STSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPGP*KYS 322
           S S+  + T    ASRS+  R S +T+   G+    +  R  RTRA   P RPP P    
Sbjct: 95  SESDEDEATPGSQASRSS--RVSPSTQQSSGLTPTPSFSR-PRTRA---PPRPPAPAPVR 148

Query: 321 RRSLSAPSTGGPCSPGTLRSGSHR 250
            R+ + P    P    T   G HR
Sbjct: 149 GRASAPPRPPAPVQQSTKDKGPHR 172



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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 30/89 (33%), Positives = 38/89 (42%)
 Frame = -2

Query: 516 KRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPG 337
           KRS +   EV +R  + + SRS +       K P    RR +       R  + PS PP 
Sbjct: 503 KRSNVKNGEVGRRR-RHSHSRSPSPSPRKRQKEPSPRRRRRSPSP-PPARRRRSPSPPPP 560

Query: 336 P*KYSRRSLSAPSTGGPCSPGTLRSGSHR 250
           P +  RRS S P    P  P   RS S R
Sbjct: 561 PRR--RRSPSLPRRRSPSPPPRRRSPSPR 587



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>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 10/110 (9%)
 Frame = -2

Query: 555 PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCA 376
           PPV           ++  S S  S   G + AS        + T         T +   A
Sbjct: 559 PPVSSSSNSSGSSSQAAYSCSHPSSSQGPQGASYPFPPVPPITTSSA---TLSTVIATVA 615

Query: 375 RTRAAKKPSRPPGP*KYSRRSLSAPSTGG----------PCSPGTLRSGS 256
            + A  K + PPGP +YS+R   APS G           P SP + R+G+
Sbjct: 616 SSPAGYKTASPPGPPQYSKR---APSPGSYKTATPPGYKPGSPPSFRTGT 662



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>JHD3B_MOUSE (Q91VY5) JmjC domain-containing histone demethylation protein 3B|
           (EC 1.14.11.-) (Jumonji domain-containing protein 2B)
          Length = 1086

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
 Frame = -2

Query: 510 SVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPGP* 331
           + LS+ E+S  +    + ++   R  ++ K        +   R A     ++P+R PGP 
Sbjct: 348 TALSSPELSSWSASRTSIKAKLLRRQISVK-------ESRPWRKAEEERRREPTRRPGPA 400

Query: 330 KYSRRSLSAPSTGGP---CSPGTLRSGSHRFGDSTSCRSVAEADADARVCRRLVPALGAE 160
            + RR  S P    P    SPG   +G     ++  C S  EA  +      L+P+ G E
Sbjct: 401 SHRRR--SQPKKSKPEESRSPGEATAGVSTLDEARGC-SRGEAMPEDEEEEELLPSQGHE 457

Query: 159 KE 154
            E
Sbjct: 458 AE 459



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>MAP2_MOUSE (P20357) Microtubule-associated protein 2 (MAP 2)|
          Length = 1828

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
 Frame = -2

Query: 555  PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCA 376
            PP R V G +     S+ S+   ++RT +    R A   G+     PG            
Sbjct: 1554 PPRRGVSGDREENSFSLNSSISSARRTTRSEPIRRAGKSGTSTPTTPGS----------- 1602

Query: 375  RTRAAKKPSRPPGP*KYSRRSLSAPSTGG-PCSPGTLRSG 259
                A  P  PP    YS R+   P T   P +PGT +SG
Sbjct: 1603 ---TAITPGTPP---SYSSRTPGTPGTPSYPRTPGTPKSG 1636



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>PARD3_HUMAN (Q8TEW0) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (CTCL tumor antigen se2-5) (PAR3-alpha)
          Length = 1356

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -2

Query: 474 GKEAASRSATTRGSLATKG-PGGMLRRTTVERCARTRAAKKPSRPPGP 334
           GK       T R S++T+G   GM++     R ++    K P  PPGP
Sbjct: 652 GKTNQDAMETLRRSMSTEGNKRGMIQLIVARRISKCNELKSPGSPPGP 699



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>MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2)|
          Length = 1861

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
 Frame = -2

Query: 555  PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCA 376
            PP R V G +     S+ S+   ++RT +    R A   G+     PG            
Sbjct: 1556 PPRRGVSGDREENSFSLNSSISSARRTTRSEPIRRAGKSGTSTPTTPGS----------- 1604

Query: 375  RTRAAKKPSRPPGP*KYSRRSLSAPSTGG-PCSPGTLRSG 259
                A  P  PP    YS R+   P T   P +PGT +SG
Sbjct: 1605 ---TAITPGTPP---SYSSRTPGTPGTPSYPRTPGTPKSG 1638



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>ATG1_MAGGR (Q52EB3) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)|
           (Autophagy-related protein 1)
          Length = 982

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 22/87 (25%), Positives = 34/87 (39%)
 Frame = -2

Query: 465 AASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPGP*KYSRRSLSAPSTGGP 286
           +A+ SA +R + A  G     R+      A  R  +     PG     RR  + PST  P
Sbjct: 391 SAAESAPSRQTSAFSGIAAEARKQAAAE-ASARTGQSSRNEPGDNLVPRRPQAQPSTSAP 449

Query: 285 CSPGTLRSGSHRFGDSTSCRSVAEADA 205
             PG          +++  RS  E+ +
Sbjct: 450 SKPGLYEERRRGISNASLNRSNRESSS 476



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>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)|
          Length = 706

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
 Frame = -2

Query: 546 RPVEGMK--VPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKG----PGGMLRRTTVE 385
           RPV G     P  R   S S   ++ G   A+R A+  G   TK     PGG  R+   +
Sbjct: 534 RPVAGGPGAPPAARPPASPSP-QRQAGAPQATRQASISGPAPTKASGAPPGGQQRQGPPQ 592

Query: 384 RCARTRAAKKPSRPPGP*KYSRRSLSAPSTGGPCSPGTLRSG 259
                    KP  P GP + + ++   P TG P +     SG
Sbjct: 593 ---------KPPGPAGPTRQASQAGPGPRTGPPTTQQPRPSG 625



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>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)|
          Length = 1518

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 8/104 (7%)
 Frame = -2

Query: 501 STSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERC-------ARTRAAKKPSRP 343
           STS  S   G  + +    +  S +  G GG       E         A + AA      
Sbjct: 164 STSSASPTAGASSTATCPASSSSSSGNGSGGKSGSIKQEHTEIHSSSSAISAAAASTVMS 223

Query: 342 PGP*KYSRRSLSAPSTGGPCSPGT-LRSGSHRFGDSTSCRSVAE 214
           P P + +R S + P  GGP   G+    G +  G ST+  ++ E
Sbjct: 224 PPPAEATRSSPATPEGGGPAGDGSGATGGGNTSGGSTAGVAINE 267



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>APOC4_MOUSE (Q61268) Apolipoprotein C-IV precursor (Apo-CIV) (ApoC-IV)|
           (Apolipoprotein C2-linked) (ACL)
          Length = 124

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
 Frame = +2

Query: 233 EVLSP------KRWLPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAH 382
           E LSP       RW  +R    E   P++   +DR ++F+GPG   GF       H
Sbjct: 31  ESLSPTPGPESSRWSLVRARVLEMVEPLVTRTRDRWQWFWGPGAVQGFMQTYYEDH 86



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>IF2_CORJK (Q4JV51) Translation initiation factor IF-2|
          Length = 922

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -2

Query: 474 GKEAASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPGP 334
           G+E+A  SATT    A  GP    +       A  +AA KP   PGP
Sbjct: 54  GEESAKESATTPSPAAKPGPKPAAK-------AAPKAAAKPGPKPGP 93



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>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = -2

Query: 486 SKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRP--PGP*KYSRRS 313
           S  +    AS S+ + GS  + GP    RR +  R          +RP  P P       
Sbjct: 168 SSPSAASPASSSSGSSGSSGSPGPSAAPRRWSPARGDPVGEPGPAARPRTPAPPAQPAAV 227

Query: 312 LSAPSTGGPCSPGTLRSG 259
            +AP+  GP SP +  +G
Sbjct: 228 AAAPARRGPASPASPAAG 245



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>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator|
            of retinoic acid and thyroid hormone receptor) (SMRT)
            (SMRTe) (Thyroid-, retinoic-acid-receptor-associated
            corepressor) (T3 receptor-associating factor) (TRAC) (CTG
            repeat p
          Length = 2517

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 522  PVKRSVLSTSEVSKRTGKEAASRSATTRGSL-ATKGPGGMLRRTTVE 385
            PVK      +E     GK+A +  AT  G+L A K  GG  R TT +
Sbjct: 861  PVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAK 907



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>GLXD_RHIME (O87392) Glutamate synthase large subunit-like protein|
          Length = 442

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -2

Query: 531 MKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGM 406
           +K+P+  + +S   +S    KEA  R AT  G+  T G GGM
Sbjct: 86  LKIPITIAGMSFGALSG-PAKEALGRGATASGTSTTTGDGGM 126



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>GDF1_HUMAN (P27539) Embryonic growth/differentiation factor 1 precursor|
           (GDF-1)
          Length = 372

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 27/97 (27%), Positives = 37/97 (38%)
 Frame = -2

Query: 456 RSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPGP*KYSRRSLSAPSTGGPCSP 277
           R A TR S      G     T V   +    A++PSR     +++  + +AP  G   S 
Sbjct: 108 RGAPTRASEPVSAAGHCPEWTVVFDLSAVEPAERPSRARLELRFAAAAAAAPEGGWELSV 167

Query: 276 GTLRSGSHRFGDSTSCRSVAEADADARVCRRLVPALG 166
                G             A AD    + R+LVPALG
Sbjct: 168 AQAGQG-------------AGADPGPVLLRQLVPALG 191



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>ERFB_EMENI (Q5B3W7) Palmitoyltransferase erf2 (EC 2.3.1.-) (DHHC cysteine-rich|
           domain-containing protein erf2) (Ras protein
           acyltransferase)
          Length = 601

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 522 PVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKG 418
           P + S+ STS+++ R G  A+  S T   SLA  G
Sbjct: 70  PARSSIASTSQITNRPGSSASRLSRTHIPSLAASG 104



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>YE86_SCHPO (O14302) Hypothetical protein C9G1.06c in chromosome I|
          Length = 886

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
 Frame = -2

Query: 555 PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCA 376
           P  RPV  + +P+ +   + S V K    +   R +T +     KG GG L++T  +   
Sbjct: 304 PIPRPVSTL-IPLTQVRTTASNVIKPR-PQTTERPSTAQSF--RKG-GGFLKKTFKKLLR 358

Query: 375 RTRAAKKPSRPPGP*KYSRRSLSAPSTG-GPCSPGTLRS 262
           R  + +KPS  P P   S  + + P  G  P SP TL+S
Sbjct: 359 RGSSKRKPSLQPTP-PVSYPAHNVPQKGVRPASPHTLKS 396



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>PTPR2_MACNE (O02695) Receptor-type tyrosine-protein phosphatase N2 precursor|
           (EC 3.1.3.48) (R-PTP-N2) (M1851)
          Length = 1013

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -2

Query: 423 KGPGGMLRRTTVERCARTRAAKKPSRPPGP*KYSRRSLSAPSTGGPCSPGTLRSGSHRFG 244
           + PG        E C +  A + P RP GP      S+S+  + GP    + RS +  + 
Sbjct: 654 RDPGADATAAYQELCRQRMATRPPDRPEGPHTSRISSVSSQFSDGPMPSPSARSSASSWS 713

Query: 243 D 241
           +
Sbjct: 714 E 714


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,507,223
Number of Sequences: 219361
Number of extensions: 953987
Number of successful extensions: 4373
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4352
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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