Clone Name | bart20d07 |
---|---|
Clone Library Name | barley_pub |
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 222 bits (565), Expect = 7e-58 Identities = 111/151 (73%), Positives = 122/151 (80%), Gaps = 2/151 (1%) Frame = +2 Query: 131 MATAVHQLSFSAPXXXXXXXXXXXXXXXXXXXX--HEVLSPKRWLPLRKVPGEHGPPVLG 304 MATA +SF++P EV+SPKR LPLRKVPG++GPPV+G Sbjct: 1 MATAAACISFASPSPARVVIRRQTRASASASATDRQEVVSPKRRLPLRKVPGDYGPPVVG 60 Query: 305 ALKDRLEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVAKDPRVVALLDAASFPVLF 484 A++DR EYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVA+DPRVVALLDAASFPVLF Sbjct: 61 AIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRVVALLDAASFPVLF 120 Query: 485 DTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577 DTSLVDKTDLFTGTFMPST LTGGYRVLSY+ Sbjct: 121 DTSLVDKTDLFTGTFMPSTDLTGGYRVLSYL 151
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 150 bits (380), Expect = 2e-36 Identities = 68/106 (64%), Positives = 86/106 (81%) Frame = +2 Query: 260 PLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVAKDP 439 PLR++PG +G P +KDRLEYFYG GGRD +F +R++ ++STV R NMPPGPFV+ +P Sbjct: 7 PLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNP 66 Query: 440 RVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577 +V+ LLDA SFP+LFD S V+K DLFTGT+MPST LTG YRVLSY+ Sbjct: 67 KVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGAYRVLSYL 112
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 147 bits (372), Expect = 2e-35 Identities = 68/112 (60%), Positives = 91/112 (81%) Frame = +2 Query: 242 SPKRWLPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGP 421 S + LP+R++PG++G P +G ++DRL+YFY G R+ FF +R++ ++STV R NMPPGP Sbjct: 65 SDETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQG-REEFFKSRLQKYKSTVYRANMPPGP 123 Query: 422 FVAKDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577 F+A +PRV+ LLDA SFPVLFD S V+K DLFTGT+MPST LTGGYR+LSY+ Sbjct: 124 FIASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRILSYL 175
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 143 bits (360), Expect = 4e-34 Identities = 65/107 (60%), Positives = 85/107 (79%) Frame = +2 Query: 257 LPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVAKD 436 LP+R +PG +G P++G +KDR +YFY G + FF +R+R + STV R+NMPPG F+A++ Sbjct: 52 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEE-FFKSRIRKYNSTVYRVNMPPGAFIAEN 110 Query: 437 PRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577 P+VVALLD SFPVLFD V+K DLFTGT+MPST LTGGYR+LSY+ Sbjct: 111 PQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYL 157
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 140 bits (352), Expect = 3e-33 Identities = 66/107 (61%), Positives = 86/107 (80%) Frame = +2 Query: 257 LPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVAKD 436 LP R VPG +G P + A++DRL+++Y G +D +F +R + STVVR+N+PPGPF+A+D Sbjct: 7 LPRRPVPGSYGVPFVSAVRDRLDFYYLQG-QDKYFESRAERYGSTVVRINVPPGPFMARD 65 Query: 437 PRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577 PRVVALLDA SFPVLFD + V+K D+FTGTFMPST LTGGYRV +Y+ Sbjct: 66 PRVVALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYL 112
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 121 bits (304), Expect = 1e-27 Identities = 65/114 (57%), Positives = 82/114 (71%), Gaps = 1/114 (0%) Frame = +2 Query: 239 LSPKRWLPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHR-STVVRLNMPP 415 LSP L +R++PG +G P L L+DRL+Y+Y G D FF +RV H +TV+R+NMPP Sbjct: 22 LSPSGLL-IREIPGGYGVPFLSPLRDRLDYYYFQGA-DEFFRSRVARHGGATVLRVNMPP 79 Query: 416 GPFVAKDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577 GPF+A DPRVVALLDA SF VL D S+VDK D GTFMPS L GG+R L+++ Sbjct: 80 GPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLAFL 133
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 119 bits (298), Expect = 6e-27 Identities = 61/114 (53%), Positives = 82/114 (71%), Gaps = 1/114 (0%) Frame = +2 Query: 239 LSPKRWLPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAHR-STVVRLNMPP 415 LSP LP+R++PG +G P L+DRL+YFY G + +F +RV H +TV+R+NMPP Sbjct: 22 LSPSG-LPIREIPGGYGVPFFSPLRDRLDYFYFQGAEE-YFRSRVARHGGATVLRVNMPP 79 Query: 416 GPFVAKDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGYRVLSYV 577 GPF++ +PRVVALLDA SF VL D S+VDK D GT+MPS L GG+R L+++ Sbjct: 80 GPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFL 133
>SGS3_DROER (P13730) Salivary glue protein Sgs-3 precursor| Length = 328 Score = 35.0 bits (79), Expect = 0.15 Identities = 26/98 (26%), Positives = 41/98 (41%) Frame = -2 Query: 567 STR*PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTV 388 +T+ P + V + P KR+ + + T K A ++ ATT+ + P +R T Sbjct: 207 TTKRAPTKRVTTKRAPTKRATTKRAPTKRATTKRAPTKRATTK-----RAP---TKRATT 258 Query: 387 ERCARTRAAKKPSRPPGP*KYSRRSLSAPSTGGPCSPG 274 +R RA K + + R S P PC PG Sbjct: 259 KRAPTKRATTK--------RATARPTSKPCGCKPCGPG 288
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 33.9 bits (76), Expect = 0.34 Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 9/117 (7%) Frame = -2 Query: 555 PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERC- 379 PP PV+ + P R + ++ ++ A + A G +G G+ R T Sbjct: 442 PPAVPVDAHRAPRSRMTQAQTDTQAQSLGRAGATDARGSGGPGAEGGPGVPRGTNTPGAA 501 Query: 378 --ARTRAAKKPSRPPGP*KYSRRSLSAPSTGGPCSP------GTLRSGSHRFGDSTS 232 A AA +P + G S SA S+ P SP G R+ R DS S Sbjct: 502 PHAAEGAAARPRKRRGSDSGPAASSSASSSAAPRSPLAPQGVGAKRAAPRRAPDSDS 558
>HEM1_AGABI (Q92403) 5-aminolevulinate synthase, mitochondrial precursor (EC| 2.3.1.37) (5-aminolevulinic acid synthase) (Delta-aminolevulinate synthase) (Delta-ALA synthetase) Length = 621 Score = 32.7 bits (73), Expect = 0.76 Identities = 22/55 (40%), Positives = 27/55 (49%) Frame = +2 Query: 395 VRLNMPPGPFVAKDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTGLTGGY 559 V L P G VA+ A L A S P S++D+ D+ TGT S G GGY Sbjct: 316 VGLYGPRGAGVAEHLDYDAHLAAGSSPDPIPGSVMDRIDIITGTLGKSYGAVGGY 370
>YKR4_EBV (P30117) Hypothetical protein BKRF4| Length = 217 Score = 32.7 bits (73), Expect = 0.76 Identities = 28/84 (33%), Positives = 37/84 (44%) Frame = -2 Query: 501 STSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPGP*KYS 322 S S+ + T ASRS+ R S +T+ G+ + R RTRA P RPP P Sbjct: 95 SESDEDEATPGSQASRSS--RVSPSTQQSSGLTPTPSFSR-PRTRA---PPRPPAPAPVR 148 Query: 321 RRSLSAPSTGGPCSPGTLRSGSHR 250 R+ + P P T G HR Sbjct: 149 GRASAPPRPPAPVQQSTKDKGPHR 172
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 32.3 bits (72), Expect = 0.99 Identities = 30/89 (33%), Positives = 38/89 (42%) Frame = -2 Query: 516 KRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPG 337 KRS + EV +R + + SRS + K P RR + R + PS PP Sbjct: 503 KRSNVKNGEVGRRR-RHSHSRSPSPSPRKRQKEPSPRRRRRSPSP-PPARRRRSPSPPPP 560 Query: 336 P*KYSRRSLSAPSTGGPCSPGTLRSGSHR 250 P + RRS S P P P RS S R Sbjct: 561 PRR--RRSPSLPRRRSPSPPPRRRSPSPR 587
>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1183 Score = 32.3 bits (72), Expect = 0.99 Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 10/110 (9%) Frame = -2 Query: 555 PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCA 376 PPV ++ S S S G + AS + T T + A Sbjct: 559 PPVSSSSNSSGSSSQAAYSCSHPSSSQGPQGASYPFPPVPPITTSSA---TLSTVIATVA 615 Query: 375 RTRAAKKPSRPPGP*KYSRRSLSAPSTGG----------PCSPGTLRSGS 256 + A K + PPGP +YS+R APS G P SP + R+G+ Sbjct: 616 SSPAGYKTASPPGPPQYSKR---APSPGSYKTATPPGYKPGSPPSFRTGT 662
>JHD3B_MOUSE (Q91VY5) JmjC domain-containing histone demethylation protein 3B| (EC 1.14.11.-) (Jumonji domain-containing protein 2B) Length = 1086 Score = 32.0 bits (71), Expect = 1.3 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 3/122 (2%) Frame = -2 Query: 510 SVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPGP* 331 + LS+ E+S + + ++ R ++ K + R A ++P+R PGP Sbjct: 348 TALSSPELSSWSASRTSIKAKLLRRQISVK-------ESRPWRKAEEERRREPTRRPGPA 400 Query: 330 KYSRRSLSAPSTGGP---CSPGTLRSGSHRFGDSTSCRSVAEADADARVCRRLVPALGAE 160 + RR S P P SPG +G ++ C S EA + L+P+ G E Sbjct: 401 SHRRR--SQPKKSKPEESRSPGEATAGVSTLDEARGC-SRGEAMPEDEEEEELLPSQGHE 457 Query: 159 KE 154 E Sbjct: 458 AE 459
>MAP2_MOUSE (P20357) Microtubule-associated protein 2 (MAP 2)| Length = 1828 Score = 30.8 bits (68), Expect = 2.9 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 1/100 (1%) Frame = -2 Query: 555 PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCA 376 PP R V G + S+ S+ ++RT + R A G+ PG Sbjct: 1554 PPRRGVSGDREENSFSLNSSISSARRTTRSEPIRRAGKSGTSTPTTPGS----------- 1602 Query: 375 RTRAAKKPSRPPGP*KYSRRSLSAPSTGG-PCSPGTLRSG 259 A P PP YS R+ P T P +PGT +SG Sbjct: 1603 ---TAITPGTPP---SYSSRTPGTPGTPSYPRTPGTPKSG 1636
>PARD3_HUMAN (Q8TEW0) Partitioning-defective 3 homolog (PARD-3) (PAR-3)| (Atypical PKC isotype-specific-interacting protein) (ASIP) (CTCL tumor antigen se2-5) (PAR3-alpha) Length = 1356 Score = 30.8 bits (68), Expect = 2.9 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = -2 Query: 474 GKEAASRSATTRGSLATKG-PGGMLRRTTVERCARTRAAKKPSRPPGP 334 GK T R S++T+G GM++ R ++ K P PPGP Sbjct: 652 GKTNQDAMETLRRSMSTEGNKRGMIQLIVARRISKCNELKSPGSPPGP 699
>MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2)| Length = 1861 Score = 30.8 bits (68), Expect = 2.9 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 1/100 (1%) Frame = -2 Query: 555 PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCA 376 PP R V G + S+ S+ ++RT + R A G+ PG Sbjct: 1556 PPRRGVSGDREENSFSLNSSISSARRTTRSEPIRRAGKSGTSTPTTPGS----------- 1604 Query: 375 RTRAAKKPSRPPGP*KYSRRSLSAPSTGG-PCSPGTLRSG 259 A P PP YS R+ P T P +PGT +SG Sbjct: 1605 ---TAITPGTPP---SYSSRTPGTPGTPSYPRTPGTPKSG 1638
>ATG1_MAGGR (Q52EB3) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)| (Autophagy-related protein 1) Length = 982 Score = 30.0 bits (66), Expect = 4.9 Identities = 22/87 (25%), Positives = 34/87 (39%) Frame = -2 Query: 465 AASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPGP*KYSRRSLSAPSTGGP 286 +A+ SA +R + A G R+ A R + PG RR + PST P Sbjct: 391 SAAESAPSRQTSAFSGIAAEARKQAAAE-ASARTGQSSRNEPGDNLVPRRPQAQPSTSAP 449 Query: 285 CSPGTLRSGSHRFGDSTSCRSVAEADA 205 PG +++ RS E+ + Sbjct: 450 SKPGLYEERRRGISNASLNRSNRESSS 476
>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)| Length = 706 Score = 30.0 bits (66), Expect = 4.9 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Frame = -2 Query: 546 RPVEGMK--VPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKG----PGGMLRRTTVE 385 RPV G P R S S ++ G A+R A+ G TK PGG R+ + Sbjct: 534 RPVAGGPGAPPAARPPASPSP-QRQAGAPQATRQASISGPAPTKASGAPPGGQQRQGPPQ 592 Query: 384 RCARTRAAKKPSRPPGP*KYSRRSLSAPSTGGPCSPGTLRSG 259 KP P GP + + ++ P TG P + SG Sbjct: 593 ---------KPPGPAGPTRQASQAGPGPRTGPPTTQQPRPSG 625
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 30.0 bits (66), Expect = 4.9 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 8/104 (7%) Frame = -2 Query: 501 STSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERC-------ARTRAAKKPSRP 343 STS S G + + + S + G GG E A + AA Sbjct: 164 STSSASPTAGASSTATCPASSSSSSGNGSGGKSGSIKQEHTEIHSSSSAISAAAASTVMS 223 Query: 342 PGP*KYSRRSLSAPSTGGPCSPGT-LRSGSHRFGDSTSCRSVAE 214 P P + +R S + P GGP G+ G + G ST+ ++ E Sbjct: 224 PPPAEATRSSPATPEGGGPAGDGSGATGGGNTSGGSTAGVAINE 267
>APOC4_MOUSE (Q61268) Apolipoprotein C-IV precursor (Apo-CIV) (ApoC-IV)| (Apolipoprotein C2-linked) (ACL) Length = 124 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Frame = +2 Query: 233 EVLSP------KRWLPLRKVPGEHGPPVLGALKDRLEYFYGPGGRDGFFAARVRAH 382 E LSP RW +R E P++ +DR ++F+GPG GF H Sbjct: 31 ESLSPTPGPESSRWSLVRARVLEMVEPLVTRTRDRWQWFWGPGAVQGFMQTYYEDH 86
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 Query: 474 GKEAASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPGP 334 G+E+A SATT A GP + A +AA KP PGP Sbjct: 54 GEESAKESATTPSPAAKPGPKPAAK-------AAPKAAAKPGPKPGP 93
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 29.3 bits (64), Expect = 8.4 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Frame = -2 Query: 486 SKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRP--PGP*KYSRRS 313 S + AS S+ + GS + GP RR + R +RP P P Sbjct: 168 SSPSAASPASSSSGSSGSSGSPGPSAAPRRWSPARGDPVGEPGPAARPRTPAPPAQPAAV 227 Query: 312 LSAPSTGGPCSPGTLRSG 259 +AP+ GP SP + +G Sbjct: 228 AAAPARRGPASPASPAAG 245
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = -2 Query: 522 PVKRSVLSTSEVSKRTGKEAASRSATTRGSL-ATKGPGGMLRRTTVE 385 PVK +E GK+A + AT G+L A K GG R TT + Sbjct: 861 PVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAK 907
>GLXD_RHIME (O87392) Glutamate synthase large subunit-like protein| Length = 442 Score = 29.3 bits (64), Expect = 8.4 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -2 Query: 531 MKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGM 406 +K+P+ + +S +S KEA R AT G+ T G GGM Sbjct: 86 LKIPITIAGMSFGALSG-PAKEALGRGATASGTSTTTGDGGM 126
>GDF1_HUMAN (P27539) Embryonic growth/differentiation factor 1 precursor| (GDF-1) Length = 372 Score = 29.3 bits (64), Expect = 8.4 Identities = 27/97 (27%), Positives = 37/97 (38%) Frame = -2 Query: 456 RSATTRGSLATKGPGGMLRRTTVERCARTRAAKKPSRPPGP*KYSRRSLSAPSTGGPCSP 277 R A TR S G T V + A++PSR +++ + +AP G S Sbjct: 108 RGAPTRASEPVSAAGHCPEWTVVFDLSAVEPAERPSRARLELRFAAAAAAAPEGGWELSV 167 Query: 276 GTLRSGSHRFGDSTSCRSVAEADADARVCRRLVPALG 166 G A AD + R+LVPALG Sbjct: 168 AQAGQG-------------AGADPGPVLLRQLVPALG 191
>ERFB_EMENI (Q5B3W7) Palmitoyltransferase erf2 (EC 2.3.1.-) (DHHC cysteine-rich| domain-containing protein erf2) (Ras protein acyltransferase) Length = 601 Score = 29.3 bits (64), Expect = 8.4 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2 Query: 522 PVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKG 418 P + S+ STS+++ R G A+ S T SLA G Sbjct: 70 PARSSIASTSQITNRPGSSASRLSRTHIPSLAASG 104
>YE86_SCHPO (O14302) Hypothetical protein C9G1.06c in chromosome I| Length = 886 Score = 29.3 bits (64), Expect = 8.4 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Frame = -2 Query: 555 PPVRPVEGMKVPVKRSVLSTSEVSKRTGKEAASRSATTRGSLATKGPGGMLRRTTVERCA 376 P RPV + +P+ + + S V K + R +T + KG GG L++T + Sbjct: 304 PIPRPVSTL-IPLTQVRTTASNVIKPR-PQTTERPSTAQSF--RKG-GGFLKKTFKKLLR 358 Query: 375 RTRAAKKPSRPPGP*KYSRRSLSAPSTG-GPCSPGTLRS 262 R + +KPS P P S + + P G P SP TL+S Sbjct: 359 RGSSKRKPSLQPTP-PVSYPAHNVPQKGVRPASPHTLKS 396
>PTPR2_MACNE (O02695) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (M1851) Length = 1013 Score = 29.3 bits (64), Expect = 8.4 Identities = 16/61 (26%), Positives = 26/61 (42%) Frame = -2 Query: 423 KGPGGMLRRTTVERCARTRAAKKPSRPPGP*KYSRRSLSAPSTGGPCSPGTLRSGSHRFG 244 + PG E C + A + P RP GP S+S+ + GP + RS + + Sbjct: 654 RDPGADATAAYQELCRQRMATRPPDRPEGPHTSRISSVSSQFSDGPMPSPSARSSASSWS 713 Query: 243 D 241 + Sbjct: 714 E 714 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,507,223 Number of Sequences: 219361 Number of extensions: 953987 Number of successful extensions: 4373 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4352 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)