ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart20d03 |
|---|---|
| Clone Library Name | barley_pub |
>RUVB2_MOUSE (Q9WTM5) RuvB-like 2 (EC 3.6.1.-) (p47 protein)| Length = 462 Score = 189 bits (480), Expect = 5e-48 Identities = 94/147 (63%), Positives = 118/147 (80%) Frame = +3 Query: 90 MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLI 269 +A ++ E RD+TRIERIGAHSHIRGLGLD ++E R AS+GMVGQL ARRAAG++L++I Sbjct: 3 VAATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMI 62 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 449 R+GKIAGRAVL+AGQPGTGKTA+AMG+A++LG +TPF ++A SE+FSL++SKTEALTQAF Sbjct: 63 REGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAF 122 Query: 450 RRAIGVRXXXXXXXXXXXXXXXXXDRP 530 RR+IGVR DRP Sbjct: 123 RRSIGVRIKEETEIIEGEVVEIQIDRP 149
>RUVB2_HUMAN (Q9Y230) RuvB-like 2 (EC 3.6.1.-) (48-kDa TATA box-binding| protein-interacting protein) (48-kDa TBP-interacting protein) (TIP49b) (Repressing pontin 52) (Reptin 52) (51 kDa erythrocyte cytosolic protein) (ECP-51) (TIP60-associated protein 54- Length = 462 Score = 188 bits (478), Expect = 8e-48 Identities = 93/142 (65%), Positives = 116/142 (81%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++ E RD+TRIERIGAHSHIRGLGLD ++E R AS+GMVGQL ARRAAG++L++IR+GKI Sbjct: 8 KVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKI 67 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGRAVL+AGQPGTGKTA+AMG+A++LG +TPF ++A SE+FSL++SKTEALTQAFRR+IG Sbjct: 68 AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIG 127 Query: 465 VRXXXXXXXXXXXXXXXXXDRP 530 VR DRP Sbjct: 128 VRIKEETEIIEGEVVEIQIDRP 149
>RUVB2_XENLA (Q9DE27) RuvB-like 2 (EC 3.6.1.-) (Reptin)| Length = 462 Score = 186 bits (471), Expect = 5e-47 Identities = 91/142 (64%), Positives = 116/142 (81%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++ E RD+TRIERIGAHSHIRGLGLD ++E R S+GMVGQL +RRAAG+IL++I++GKI Sbjct: 8 KVPEVRDVTRIERIGAHSHIRGLGLDDALEPRQVSQGMVGQLASRRAAGVILEMIKEGKI 67 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGRAVL+AGQPGTGKTA+AMG+A++LG++TPF ++A SE+FSL++SKTEALTQAFRR+IG Sbjct: 68 AGRAVLIAGQPGTGKTAIAMGMAQALGSDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIG 127 Query: 465 VRXXXXXXXXXXXXXXXXXDRP 530 VR DRP Sbjct: 128 VRIKEETEIIEGEVVEVQIDRP 149
>RUVB2_BRARE (P83571) RuvB-like 2 (EC 3.6.1.-) (Reptin) (zReptin)| Length = 463 Score = 184 bits (467), Expect = 2e-46 Identities = 92/142 (64%), Positives = 114/142 (80%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++ E RD+TRIERIGAHSHIRGLGLD ++E R S+GMVGQL +RRAAGLIL++I+ G+I Sbjct: 9 KVPEVRDITRIERIGAHSHIRGLGLDDALEPRQVSQGMVGQLASRRAAGLILEMIKDGQI 68 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGRAVL+AGQPGTGKTA+AMGIA+SLG +TPF ++A SE+FSL++SKTEAL+QAFR+AIG Sbjct: 69 AGRAVLIAGQPGTGKTAIAMGIAQSLGPDTPFTALAGSEIFSLEMSKTEALSQAFRKAIG 128 Query: 465 VRXXXXXXXXXXXXXXXXXDRP 530 VR DRP Sbjct: 129 VRIKEETEIIEGEVVEIQIDRP 150
>RUVB2_SCHPO (O94692) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 465 Score = 160 bits (406), Expect = 2e-39 Identities = 72/121 (59%), Positives = 110/121 (90%) Frame = +3 Query: 108 LSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIA 287 ++ D++++ERIGAHSHI+G+GL+ ++E +++S+GMVGQ+ ARRAAG+IL++I++G+IA Sbjct: 5 VTSHNDVSKLERIGAHSHIKGIGLNDNLEPKESSQGMVGQVKARRAAGVILKMIQEGRIA 64 Query: 288 GRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGV 467 GRA+L+AG P TGKTA+AMG+A+SLG++TPF +++ASE++SL++SKTEAL QA R++IGV Sbjct: 65 GRAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQALRKSIGV 124 Query: 468 R 470 R Sbjct: 125 R 125
>RUVB2_CRYNE (Q5KND8) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 463 Score = 160 bits (406), Expect = 2e-39 Identities = 75/117 (64%), Positives = 103/117 (88%) Frame = +3 Query: 120 RDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAV 299 RD+T++ERIG HSHI GLGLDS++E R +S+GM+GQ AR+AAG+IL+++++G+IAGRA+ Sbjct: 13 RDVTKMERIGVHSHIHGLGLDSNLEPRASSQGMIGQGKARKAAGVILKMVQEGRIAGRAI 72 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 L+AG P TGKTALAM + ++LG++ PF + ASE+FSL++SKTE+LTQAFRRAIGVR Sbjct: 73 LMAGPPSTGKTALAMAMTQTLGSDVPFVMLTASEVFSLEISKTESLTQAFRRAIGVR 129
>RUVB2_NEUCR (Q873C7) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 481 Score = 159 bits (401), Expect = 7e-39 Identities = 79/127 (62%), Positives = 108/127 (85%), Gaps = 1/127 (0%) Frame = +3 Query: 93 AELKRLSESRDLTRIERIGAHSHIRGLGLDS-SIEARDASEGMVGQLPARRAAGLILQLI 269 A++ + ES+DL + I AHSHIRGLG+D+ ++E R AS+G+VGQ AR+AA ++L++I Sbjct: 3 AQVVTVGESKDLRGLNLIAAHSHIRGLGVDADTLEPRVASQGLVGQEKARKAAAVVLEMI 62 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 449 +QGKIAGRAVL+AG P TGKTALAMG+A+SLG + PF ++AASE++SL++SKTEALTQAF Sbjct: 63 KQGKIAGRAVLIAGPPSTGKTALAMGMAQSLGTDVPFTTLAASEIYSLEMSKTEALTQAF 122 Query: 450 RRAIGVR 470 R++IGVR Sbjct: 123 RKSIGVR 129
>RUVB2_YEAST (Q12464) RuvB-like protein 2 (EC 3.6.1.-) (RUVBL2) (TIP49b homolog)| (TIP49-homology protein 2) Length = 471 Score = 158 bits (400), Expect = 9e-39 Identities = 76/120 (63%), Positives = 100/120 (83%) Frame = +3 Query: 111 SESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAG 290 +E+ DL + I AHSHI GLGLD +++ R SEGMVGQL ARRAAG+IL++++ G IAG Sbjct: 9 NETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAG 68 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 RAVL+AG P TGKTALAMG+++SLG + PF ++A SE+FSL+LSKTEALTQAFR++IG++ Sbjct: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIK 128
>RUVB2_USTMA (Q4P6N7) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 476 Score = 157 bits (396), Expect = 3e-38 Identities = 75/127 (59%), Positives = 105/127 (82%) Frame = +3 Query: 90 MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLI 269 MA++ SE + +ERIGAHSH++GLGLD +E R +S+GMVGQ AR+AAGLI++++ Sbjct: 1 MAQISTTSE-HTIQTLERIGAHSHVKGLGLDDQLEPRPSSQGMVGQRAARKAAGLIVKMV 59 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 449 + G+IAGRA+L+ G P TGKTA+AMG+A++LG++ PF ++ASE+FSL++SKTEAL QAF Sbjct: 60 QDGRIAGRAILMVGPPSTGKTAIAMGMAQTLGSDVPFTMLSASEVFSLEMSKTEALMQAF 119 Query: 450 RRAIGVR 470 RR+IGVR Sbjct: 120 RRSIGVR 126
>RUVB2_DEBHA (Q6BSB8) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 480 Score = 156 bits (395), Expect = 4e-38 Identities = 72/119 (60%), Positives = 103/119 (86%) Frame = +3 Query: 114 ESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGR 293 +S+DL + I AHSHI GLGLD +++ +++ +GMVGQL AR+AAG+IL++I+ GKIAGR Sbjct: 11 QSKDLNGLSLIAAHSHISGLGLDDNLQPKESGQGMVGQLKARKAAGVILKMIQAGKIAGR 70 Query: 294 AVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 AVL+AG P TGKTA+AMG++++LG+E PF ++A SE+FSL+LSKTE+LTQAFR++IG++ Sbjct: 71 AVLVAGPPSTGKTAIAMGLSQNLGSEVPFTAIAGSEIFSLELSKTESLTQAFRKSIGIK 129
>RUVB2_ASPFU (Q4WKH9) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 469 Score = 154 bits (389), Expect = 2e-37 Identities = 74/125 (59%), Positives = 107/125 (85%), Gaps = 1/125 (0%) Frame = +3 Query: 99 LKRLSESRDLTRIERIGAHSHIRGLGLDS-SIEARDASEGMVGQLPARRAAGLILQLIRQ 275 + ++E+++L + I AHSHIRGLG+D+ S++ R +S+G+VGQ AR+AA +ILQ++++ Sbjct: 5 ISTVAETKELRGLNLIAAHSHIRGLGVDADSLQPRTSSQGLVGQEKARKAAAVILQMVKE 64 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRR 455 GKIAGRAVL+AG P TGKTA+AMG+A+SLG++ PF +AASE+FS+++SKTEALTQAFR+ Sbjct: 65 GKIAGRAVLIAGPPSTGKTAIAMGMAQSLGSDVPFTMLAASEIFSMEMSKTEALTQAFRK 124 Query: 456 AIGVR 470 +IGVR Sbjct: 125 SIGVR 129
>RUVB2_CANAL (Q5AGZ9) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 498 Score = 154 bits (388), Expect = 2e-37 Identities = 73/123 (59%), Positives = 103/123 (83%) Frame = +3 Query: 102 KRLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGK 281 K + + D+T + I AHSHI GLGLD +++ ++ ++GMVGQL AR+AAG+IL+++ GK Sbjct: 10 KVTTTTTDVTGLSLIAAHSHISGLGLDDNLQPKENAQGMVGQLSARKAAGVILKMVEAGK 69 Query: 282 IAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAI 461 IAGRAVL+AG P TGKTA+AMG+++SLG + PF ++AASE+FSL+LSKTEALTQAFR++I Sbjct: 70 IAGRAVLIAGPPSTGKTAIAMGLSQSLGNQVPFTALAASEVFSLELSKTEALTQAFRKSI 129 Query: 462 GVR 470 G++ Sbjct: 130 GIK 132
>RUVB2_CANGA (Q6FSF1) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 476 Score = 152 bits (384), Expect = 7e-37 Identities = 73/115 (63%), Positives = 96/115 (83%) Frame = +3 Query: 126 LTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLL 305 L + I AHSHI GLGLD +++ R +SEGMVGQL ARRAAG+IL++I+ G IAGRA+L+ Sbjct: 15 LKSLSLIAAHSHITGLGLDDNLQPRASSEGMVGQLQARRAAGVILRMIQNGSIAGRAILV 74 Query: 306 AGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 AG P TGKTALAMG+++SLG + PF ++ SE+FSL+LSKTEALTQAFR++IG++ Sbjct: 75 AGPPSTGKTALAMGLSQSLGKDVPFTAITGSEIFSLELSKTEALTQAFRKSIGIK 129
>RUVB2_KLULA (Q6CT29) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 467 Score = 152 bits (383), Expect = 9e-37 Identities = 72/115 (62%), Positives = 97/115 (84%) Frame = +3 Query: 126 LTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLL 305 L + I AHSHI GLGLD +++ + +S+GMVGQL ARRAAG+IL++++ G IAGRAVL+ Sbjct: 12 LKSLSLIAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLV 71 Query: 306 AGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 AG P TGKTALAMG+++SLG + PF ++A SE+FSL+LSKTEALTQAFR++IG++ Sbjct: 72 AGPPSTGKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIK 126
>RUVB2_ASHGO (Q755G5) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 469 Score = 150 bits (380), Expect = 2e-36 Identities = 73/115 (63%), Positives = 97/115 (84%) Frame = +3 Query: 126 LTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLL 305 L + I HSHI GLGLD +++ + +S+GMVGQL ARRAAG+IL++++ G IAGRAVL+ Sbjct: 13 LKSLSLIATHSHIVGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGTIAGRAVLV 72 Query: 306 AGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 AG P TGKTALAMG+++SLGA+ PF ++A SE+FSL+LSKTEALTQAFR++IGV+ Sbjct: 73 AGPPSTGKTALAMGLSQSLGADVPFTAMAGSEIFSLELSKTEALTQAFRKSIGVK 127
>RUVB2_GIBZE (Q4I948) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 464 Score = 150 bits (378), Expect = 3e-36 Identities = 74/117 (63%), Positives = 101/117 (86%), Gaps = 1/117 (0%) Frame = +3 Query: 123 DLTRIERIGAHSHIRGLGLDSS-IEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAV 299 DL + I AHSHIRGLG+D++ +E R +S+G+VGQ AR+AA ++LQ+I++GKIAGRAV Sbjct: 4 DLRGLNLIAAHSHIRGLGVDATTLEPRASSQGLVGQEKARKAAAVMLQMIKEGKIAGRAV 63 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 L+AG P TGKTA+AMG+A+SLG + PF ++A+SE+FSL++SKTEALTQAFR++IGVR Sbjct: 64 LIAGPPSTGKTAIAMGMAQSLGPDVPFTTLASSEIFSLEMSKTEALTQAFRKSIGVR 120
>RUVB2_EMENI (Q5BGK3) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 452 Score = 149 bits (375), Expect = 7e-36 Identities = 73/110 (66%), Positives = 96/110 (87%), Gaps = 1/110 (0%) Frame = +3 Query: 144 IGAHSHIRGLGLD-SSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPG 320 I AHSHIRGLG+D S++ R AS+G+VGQ AR+AA +ILQ++++GKIAGRAVL+AG P Sbjct: 4 IAAHSHIRGLGVDVDSLQPRPASQGLVGQEKARKAAAVILQMVKEGKIAGRAVLIAGPPS 63 Query: 321 TGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 TGKTA+AMG+A+SLG + PF +AASE+FS+++SKTEALTQAFR++IGVR Sbjct: 64 TGKTAIAMGMAQSLGPDVPFTMLAASEIFSMEMSKTEALTQAFRKSIGVR 113
>RUVB1_RAT (P60123) RuvB-like 1 (EC 3.6.1.-) (49-kDa TATA box-binding| protein-interacting protein) (49 kDa TBP-interacting protein) (TIP49a) (Pontin 52) (DNA helicase p50) Length = 456 Score = 135 bits (340), Expect = 8e-32 Identities = 65/122 (53%), Positives = 92/122 (75%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++ E + T+ +RI +HSH++GLGLD S A+ A+ G+VGQ AR A G+I++LI+ K+ Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGRAVLLAG PGTGKTALA+ IA+ LG++ PF + SE++S ++ KTE L + FRRAIG Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 Query: 465 VR 470 +R Sbjct: 122 LR 123
>RUVB1_MOUSE (P60122) RuvB-like 1 (EC 3.6.1.-) (49-kDa TATA box-binding| protein-interacting protein) (49 kDa TBP-interacting protein) (TIP49a) (Pontin 52) (DNA helicase p50) Length = 456 Score = 135 bits (340), Expect = 8e-32 Identities = 65/122 (53%), Positives = 92/122 (75%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++ E + T+ +RI +HSH++GLGLD S A+ A+ G+VGQ AR A G+I++LI+ K+ Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGRAVLLAG PGTGKTALA+ IA+ LG++ PF + SE++S ++ KTE L + FRRAIG Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 Query: 465 VR 470 +R Sbjct: 122 LR 123
>RUVB1_HUMAN (Q9Y265) RuvB-like 1 (EC 3.6.1.-) (49-kDa TATA box-binding| protein-interacting protein) (49 kDa TBP-interacting protein) (TIP49a) (Pontin 52) (Nuclear matrix protein 238) (NMP 238) (54 kDa erythrocyte cytosolic protein) (ECP-54) (TIP60-associ Length = 456 Score = 135 bits (340), Expect = 8e-32 Identities = 65/122 (53%), Positives = 92/122 (75%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++ E + T+ +RI +HSH++GLGLD S A+ A+ G+VGQ AR A G+I++LI+ K+ Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGRAVLLAG PGTGKTALA+ IA+ LG++ PF + SE++S ++ KTE L + FRRAIG Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 Query: 465 VR 470 +R Sbjct: 122 LR 123
>RUVB1_XENLA (Q9DE26) RuvB-like 1 (EC 3.6.1.-) (Pontin)| Length = 456 Score = 132 bits (332), Expect = 7e-31 Identities = 64/122 (52%), Positives = 90/122 (73%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++ E + T+ +RI HSH++GLGLD + A+ A+ G+VGQ AR A G+I++LI+ K+ Sbjct: 2 KIEEVKSTTKTQRIATHSHVKGLGLDENGIAKQAAAGLVGQENAREACGVIVELIKSKKM 61 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGRAVLLAG PGTGKTALA+ IA+ LG + PF + SE++S ++ KTE L + FRRAIG Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGNKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 Query: 465 VR 470 +R Sbjct: 122 LR 123
>RUVB1_BRARE (Q8AWW7) RuvB-like 1 (EC 3.6.1.-) (Pontin) (zPontin)| Length = 456 Score = 132 bits (332), Expect = 7e-31 Identities = 62/122 (50%), Positives = 90/122 (73%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++ E + T+ +RI +HSH++GLGLD + A+ ++ G+VGQ AR A G+I +LIR K+ Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDEAGNAKQSASGLVGQESAREACGIITELIRSKKM 61 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGRA+LLAG PGTGKTALA+ +A+ LG + PF + SE++S ++ KTE L + FRRAIG Sbjct: 62 AGRAILLAGPPGTGKTALALAMAQELGNKVPFCPMVGSEVYSSEIKKTEVLMENFRRAIG 121 Query: 465 VR 470 +R Sbjct: 122 LR 123
>RUVB1_ASPFU (Q4WPW8) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 458 Score = 124 bits (311), Expect = 2e-28 Identities = 59/122 (48%), Positives = 87/122 (71%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++SE + +R R AH+HI+GLGL A +++G VGQ AR A G+++ LI+ K+ Sbjct: 3 QISEVKGSSRENRTAAHTHIKGLGLRPDGTAEPSADGFVGQAAAREACGVVVDLIKAKKM 62 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGRA++LAG PGTGKTALA+ +++ LG + PF + SE++S ++ KTEAL + FRRAIG Sbjct: 63 AGRAIMLAGGPGTGKTALALAVSQELGTKVPFCPIVGSEIYSAEVKKTEALMENFRRAIG 122 Query: 465 VR 470 +R Sbjct: 123 LR 124
>RUVB1_CANGA (Q6FU78) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 457 Score = 124 bits (310), Expect = 3e-28 Identities = 63/127 (49%), Positives = 89/127 (70%) Frame = +3 Query: 90 MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLI 269 M ++ ++ES+ T R AH+HI+GLGLD + AR G VGQ+ AR A G+I+ LI Sbjct: 1 MVQITEVNESKAGTA-NRTAAHTHIKGLGLDDTGAARQVEGGFVGQVEAREACGVIVDLI 59 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 449 + K++GRA+LLAG P TGKTALA+ I++ LG + PF + SEL+S+++ KTE L + F Sbjct: 60 KAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENF 119 Query: 450 RRAIGVR 470 RRAIG+R Sbjct: 120 RRAIGLR 126
>RUVB1_EMENI (Q5BBV9) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 460 Score = 123 bits (309), Expect = 3e-28 Identities = 61/122 (50%), Positives = 86/122 (70%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++SE + +R R AH+HI+GLGL A + +G VGQ AR A G+++ LI+ K+ Sbjct: 3 QISEVKGNSRDNRTAAHTHIKGLGLRPDGTAEVSGDGWVGQAAAREACGVVVDLIKAKKM 62 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGRAVLLAG PGTGKTALA+ +++ LG + PF + SE++S ++ KTEAL + FRRAIG Sbjct: 63 AGRAVLLAGGPGTGKTALALAVSQELGTKVPFCPIVGSEIYSAEVKKTEALMENFRRAIG 122 Query: 465 VR 470 +R Sbjct: 123 LR 124
>RUVB2_YARLI (Q6C3X6) RuvB-like helicase 2 (EC 3.6.1.-)| Length = 424 Score = 122 bits (306), Expect = 7e-28 Identities = 59/85 (69%), Positives = 76/85 (89%) Frame = +3 Query: 216 MVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAA 395 MVGQ+ ARRAA ++LQ+I+ GKIAGR+VLLAG P TGKTA+AMGI++SLG++ PF S+A Sbjct: 1 MVGQVKARRAAAVVLQMIKDGKIAGRSVLLAGPPSTGKTAIAMGISQSLGSDVPFTSLAG 60 Query: 396 SELFSLDLSKTEALTQAFRRAIGVR 470 SE++SL+LSKTEAL QAFR++IGVR Sbjct: 61 SEIYSLELSKTEALNQAFRKSIGVR 85
>RUVB1_YARLI (Q6CB52) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 453 Score = 122 bits (306), Expect = 7e-28 Identities = 60/122 (49%), Positives = 84/122 (68%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 +++E + +R R AH+HIRGLGL+ A+ G VGQ AR A GL++ LIR K+ Sbjct: 3 QINEIKSNSRDTRTAAHTHIRGLGLNEMGVAKPIDAGFVGQTEAREALGLVVDLIRASKM 62 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 +GR +LLAG PGTGKTALA+ +++ LG + PF + SE+FS ++ KT AL + FRRAIG Sbjct: 63 SGRGILLAGGPGTGKTALALAVSQELGPKVPFCPIVGSEIFSAEVKKTAALMENFRRAIG 122 Query: 465 VR 470 +R Sbjct: 123 LR 124
>RUVB1_DEBHA (Q6BI60) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 457 Score = 122 bits (305), Expect = 1e-27 Identities = 62/123 (50%), Positives = 86/123 (69%), Gaps = 1/123 (0%) Frame = +3 Query: 105 RLSESRDL-TRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGK 281 +++E +D TR R AH+HI+GLGLD A+ G VGQ AR A G+I+ LI+ + Sbjct: 3 QINEVKDTQTRESRTAAHTHIKGLGLDEHGIAKRVEGGFVGQSDAREACGIIVDLIKSKR 62 Query: 282 IAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAI 461 ++G+A+LLAG PGTGKTALA+ I++ LG + PF + SELFS ++ KT AL + FRRAI Sbjct: 63 MSGKAILLAGAPGTGKTALALAISQELGPKVPFCPIVGSELFSAEIKKTAALMENFRRAI 122 Query: 462 GVR 470 G+R Sbjct: 123 GLR 125
>RUVB1_NEUCR (Q8WZS3) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 458 Score = 121 bits (304), Expect = 1e-27 Identities = 60/122 (49%), Positives = 85/122 (69%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++SE + +R R AH+HI+GLGL+S A + G VGQ AR A G+++ LI+ K+ Sbjct: 3 QISEVKGNSRDNRTAAHTHIKGLGLNSQGIAEKQASGFVGQTTAREACGVVVDLIKAHKM 62 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGR VLLAG PGTGKTALA+ I++ LG + PF + SE++S ++ KTE L + FRRAIG Sbjct: 63 AGRGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFRRAIG 122 Query: 465 VR 470 ++ Sbjct: 123 LK 124
>RUVB1_USTMA (Q4P112) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 488 Score = 121 bits (303), Expect = 2e-27 Identities = 61/120 (50%), Positives = 82/120 (68%) Frame = +3 Query: 111 SESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAG 290 S + +R RI HSHI+GLGL A +++G VGQ AR A GL+L LIR K AG Sbjct: 21 SSTSGASREARIATHSHIKGLGLSDDGTALPSAQGFVGQKAAREACGLVLDLIRMKKFAG 80 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 +A+LLAG PGTGKTALA+ +++ LG + PF + SE++S ++ KTE L + FRRAIG+R Sbjct: 81 KALLLAGGPGTGKTALALAVSQELGHKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLR 140
>RUVB1_YEAST (Q03940) RuvB-like protein 1 (EC 3.6.1.-) (RUVBL1) (TIP49a homolog)| (TIP49-homology protein 1) Length = 463 Score = 121 bits (303), Expect = 2e-27 Identities = 59/112 (52%), Positives = 81/112 (72%) Frame = +3 Query: 135 IERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQ 314 + R AH+HI+GLGLD S A+ G VGQ+ AR A G+I+ LI+ K++GRA+LLAG Sbjct: 21 VTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGG 80 Query: 315 PGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 P TGKTALA+ I++ LG + PF + SEL+S+++ KTE L + FRRAIG+R Sbjct: 81 PSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132
>RUVB1_GIBZE (Q4ICA8) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 458 Score = 119 bits (299), Expect = 5e-27 Identities = 60/122 (49%), Positives = 83/122 (68%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++SE + R R AH+HI+GLGL S A + G VGQ AR + G+++ LIR K+ Sbjct: 3 QISEVKGNKRDNRTAAHTHIKGLGLKSDGYAEKQAAGFVGQAAARESCGVVVDLIRAQKM 62 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 AGR VLLAG PGTGKTALA+ I++ LG + PF + SE++S ++ KTE L + FRRAIG Sbjct: 63 AGRGVLLAGGPGTGKTALALAISQELGTKIPFCPIVGSEIYSAEVKKTEMLMENFRRAIG 122 Query: 465 VR 470 ++ Sbjct: 123 LK 124
>RUVB1_KLULA (Q6CQA9) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 457 Score = 119 bits (299), Expect = 5e-27 Identities = 61/127 (48%), Positives = 85/127 (66%) Frame = +3 Query: 90 MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLI 269 M ++ + E T R AH+HI+GLGLD A+ G VGQ AR A G+I+ LI Sbjct: 1 MVQISEVQEQSS-TAYTRTAAHTHIKGLGLDEFGVAKQVEGGFVGQAEAREACGVIVDLI 59 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 449 + K++G+A+LLAG P TGKTALA+ I++ LG + PF + SEL+S+++ KTEAL + F Sbjct: 60 KAKKMSGKAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTEALMENF 119 Query: 450 RRAIGVR 470 RRAIG+R Sbjct: 120 RRAIGLR 126
>RUVB1_ASHGO (Q750R1) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 459 Score = 118 bits (296), Expect = 1e-26 Identities = 58/110 (52%), Positives = 78/110 (70%) Frame = +3 Query: 141 RIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPG 320 R AH+HI+GLGLD A+ G VGQ+ AR A G+I+ LI+ +++GRA+LLAG P Sbjct: 19 RTAAHTHIKGLGLDEFGAAKQVEGGFVGQVEAREACGVIVDLIKAKRMSGRAILLAGGPS 78 Query: 321 TGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 TGKTALA+ I + LG + PF + SELFS+++ KTE L + FRRAIG+R Sbjct: 79 TGKTALALAITQELGPKVPFCPLVGSELFSVEVKKTETLMENFRRAIGLR 128
>RUVB1_CRYNE (Q5KPZ8) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 484 Score = 117 bits (293), Expect = 2e-26 Identities = 57/113 (50%), Positives = 80/113 (70%) Frame = +3 Query: 132 RIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAG 311 R +RI HSHI+GLGL A +S+G +GQ+ AR A GL L L++ GK +GR +LL G Sbjct: 28 REQRIATHSHIKGLGLADDGTAMSSSQGFIGQILAREALGLHLSLLKGGKYSGRPLLLVG 87 Query: 312 QPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIGVR 470 PGTGKTALA+ +++ LG++ PF ++ SE++S ++ KTE L FRRAIG+R Sbjct: 88 PPGTGKTALALALSQELGSKVPFCAMVGSEVYSGEVKKTEVLGSCFRRAIGLR 140
>RUVB1_CANAL (Q5A0W7) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 458 Score = 116 bits (291), Expect = 4e-26 Identities = 59/127 (46%), Positives = 86/127 (67%) Frame = +3 Query: 90 MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLI 269 M ++ + E++ +R R AH+HI+GLGL+ A+ G VGQ AR A G+I+ LI Sbjct: 1 MVQITEVKENQS-SRESRTAAHTHIKGLGLNEQGIAKPIEGGFVGQNEAREACGIIVDLI 59 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAF 449 + K++G+AVL+AG P TGKTALA+ I++ LG + PF + SEL+S ++ KT AL + F Sbjct: 60 KSKKMSGKAVLIAGPPATGKTALALAISQELGPKVPFCPIVGSELYSAEVKKTSALMENF 119 Query: 450 RRAIGVR 470 RRAIG+R Sbjct: 120 RRAIGLR 126
>RUVB1_SCHPO (Q9C0X6) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 456 Score = 112 bits (279), Expect = 1e-24 Identities = 58/122 (47%), Positives = 76/122 (62%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 ++SE + R RI HSHI+GLGL G +GQ AR A G+I LI+ K Sbjct: 3 QISEVKGNGRDNRITTHSHIKGLGLKEDGTCESVGGGFIGQEKAREACGIITDLIKSKKF 62 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQAFRRAIG 464 G+ VL AG GTGKTALA+ IA+ LG + PF + SE++S ++ KTEAL + FRRAIG Sbjct: 63 GGKGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKTEALMENFRRAIG 122 Query: 465 VR 470 +R Sbjct: 123 LR 124
>RUVB_STRAW (Q820F3) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 356 Score = 45.4 bits (106), Expect = 1e-04 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Frame = +3 Query: 114 ESRDLTRIER-IGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAG 290 ++ D T ER +GA + +++++ +D E +GQ R L+L+ R Sbjct: 5 DTTDATADERLVGASADREDQAVEAALRPKDLDE-FIGQEKVREQLDLVLRAARARGATS 63 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGA 368 VLL+G PG GKT L+M IA +GA Sbjct: 64 DHVLLSGAPGLGKTTLSMIIAAEMGA 89
>RUVB_CORJK (Q4JVD9) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 354 Score = 45.1 bits (105), Expect = 1e-04 Identities = 29/75 (38%), Positives = 39/75 (52%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 +D+S+ + E +GQ R L+L R +A VLLAG PG GKT +AM IA+ Sbjct: 34 IDTSLRPKSLDE-FIGQPKVRTQLDLVLGGARSRGVAPDHVLLAGPPGLGKTTMAMIIAQ 92 Query: 357 SLGAETPFASVAASE 401 LG+ S A E Sbjct: 93 ELGSSLRMTSGPALE 107
>RUVB_THEFY (Q47N43) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 351 Score = 43.1 bits (100), Expect = 6e-04 Identities = 29/75 (38%), Positives = 39/75 (52%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 ++S++ R E VGQ R L+L+ +Q A +L++G PG GKT LAM IA Sbjct: 20 VESALRPRTLDE-FVGQDRVREQLSLVLRSAQQRGTAPDHILMSGGPGLGKTTLAMIIAA 78 Query: 357 SLGAETPFASVAASE 401 LGA S A E Sbjct: 79 ELGAPLRITSGPAIE 93
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 43.1 bits (100), Expect = 6e-04 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQAFRRA 458 + VLL G PGTGKT LA +A GA F SV E+FS + ++E A+ + FR+A Sbjct: 487 KGVLLFGPPGTGKTLLAKAVANESGAN--FISVKGPEIFSKWVGESEKAIREIFRKA 541 Score = 36.2 bits (82), Expect = 0.070 Identities = 20/47 (42%), Positives = 26/47 (55%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE 431 + VLL G PGTGKT LA +A GA F + E+ S + +TE Sbjct: 214 KGVLLVGPPGTGKTLLAKAVANEAGAN--FYVINGPEIMSKYVGETE 258
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQAFR 452 G + VLLAG PG GKT LA +A G F SV EL ++ + ++E A+ Q F+ Sbjct: 611 GLVTPAGVLLAGPPGCGKTLLAKAVANESGLN--FISVKGPELLNMYVGESERAVRQVFQ 668 Query: 453 RA 458 RA Sbjct: 669 RA 670 Score = 37.4 bits (85), Expect = 0.031 Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFS-LDLSKTEALTQAFR 452 G + R VLL G PG GKT LA IA L + P VAA E+ S + + L + F Sbjct: 294 GVVPPRGVLLHGPPGCGKTLLAHAIAGEL--DLPILKVAAPEIVSGVSGESEQKLRELFE 351 Query: 453 RAI 461 +A+ Sbjct: 352 QAV 354
>RUVB_CORDI (P61530) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 362 Score = 41.2 bits (95), Expect = 0.002 Identities = 27/75 (36%), Positives = 37/75 (49%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 +++S+ R E +GQ R L+L + +A VLL+G PG GKT +AM IA Sbjct: 41 VETSLRPRSLDE-FIGQPKVRDQLNLVLSGAKSRGVAPDHVLLSGPPGLGKTTMAMIIAY 99 Query: 357 SLGAETPFASVAASE 401 LG S A E Sbjct: 100 ELGTSLRMTSGPALE 114
>LON_BRUSU (Q8G0I7) ATP-dependent protease La (EC 3.4.21.53)| Length = 812 Score = 41.2 bits (95), Expect = 0.002 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 13/122 (10%) Frame = +3 Query: 45 RATSKQXXXXXXEVIMAELKRLSESRDLTRIERI-------------GAHSHIRGLGLDS 185 R T + E +AELK+L ++ + G S ++ L+ Sbjct: 268 RITKTKLSKEAREKALAELKKLRSMSPMSAEATVVRNYLDWLLSIPWGKKSKVKQ-DLNF 326 Query: 186 SIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 + E DA +G++ R L +Q R KI G + L G PG GKT+LA IAK+ G Sbjct: 327 AQEVLDAEHFGLGKVKERIVGYLAVQA-RSTKIKGPILCLVGPPGVGKTSLARSIAKATG 385 Query: 366 AE 371 E Sbjct: 386 RE 387
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/58 (41%), Positives = 32/58 (55%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 +L QG VLL G PGTGKT LA +A L E F S+ EL ++ + ++EA Sbjct: 679 ELFSQGLKPRSGVLLYGPPGTGKTLLAKAVATELSLE--FVSIKGPELLNMYVGESEA 734
>LON_BRUME (Q8YHC6) ATP-dependent protease La (EC 3.4.21.53)| Length = 812 Score = 40.8 bits (94), Expect = 0.003 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 13/122 (10%) Frame = +3 Query: 45 RATSKQXXXXXXEVIMAELKRLSESRDLTRIERI-------------GAHSHIRGLGLDS 185 R T + E +AELK+L ++ + G S ++ L+ Sbjct: 268 RITKTKLSKEAREKALAELKKLRSMSPMSAEATVVRNYLDWLLSIPWGKKSKVKQ-DLNF 326 Query: 186 SIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 + E DA +G++ R L +Q R KI G + L G PG GKT+LA IAK+ G Sbjct: 327 AQEVLDAEHFGLGKVKERIVEYLAVQA-RSTKIKGPILCLVGPPGVGKTSLARSIAKATG 385 Query: 366 AE 371 E Sbjct: 386 RE 387
>LON_BRUAB (P0C113) ATP-dependent protease La (EC 3.4.21.53)| Length = 812 Score = 40.8 bits (94), Expect = 0.003 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 13/122 (10%) Frame = +3 Query: 45 RATSKQXXXXXXEVIMAELKRLSESRDLTRIERI-------------GAHSHIRGLGLDS 185 R T + E +AELK+L ++ + G S ++ L+ Sbjct: 268 RITKTKLSKEAREKALAELKKLRSMSPMSAEATVVRNYLDWLLSIPWGKKSKVKQ-DLNF 326 Query: 186 SIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 + E DA +G++ R L +Q R KI G + L G PG GKT+LA IAK+ G Sbjct: 327 AQEVLDAEHFGLGKVKERIVEYLAVQA-RSTKIKGPILCLVGPPGVGKTSLARSIAKATG 385 Query: 366 AE 371 E Sbjct: 386 RE 387
>LON_BRUA2 (Q2YPX3) ATP-dependent protease La (EC 3.4.21.53)| Length = 812 Score = 40.8 bits (94), Expect = 0.003 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 13/122 (10%) Frame = +3 Query: 45 RATSKQXXXXXXEVIMAELKRLSESRDLTRIERI-------------GAHSHIRGLGLDS 185 R T + E +AELK+L ++ + G S ++ L+ Sbjct: 268 RITKTKLSKEAREKALAELKKLRSMSPMSAEATVVRNYLDWLLSIPWGKKSKVKQ-DLNF 326 Query: 186 SIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 + E DA +G++ R L +Q R KI G + L G PG GKT+LA IAK+ G Sbjct: 327 AQEVLDAEHFGLGKVKERIVEYLAVQA-RSTKIKGPILCLVGPPGVGKTSLARSIAKATG 385 Query: 366 AE 371 E Sbjct: 386 RE 387
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 40.0 bits (92), Expect = 0.005 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Frame = +3 Query: 267 IRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ- 443 ++ G R +LL G PG KT LA A + A+ F S++ +ELFS+ + + EAL + Sbjct: 313 VKMGISPMRGILLHGPPGCSKTTLAKAAANA--AQASFFSLSCAELFSMYVGEGEALLRN 370 Query: 444 AFRRA 458 F+RA Sbjct: 371 TFQRA 375
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 40.0 bits (92), Expect = 0.005 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = +3 Query: 297 VLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQAFRRA 458 +LLAG PG GKT LA +A G F SV EL ++ + ++E A+ Q F+RA Sbjct: 617 ILLAGPPGCGKTLLAKAVANESGLN--FISVKGPELLNMYVGESERAVRQVFQRA 669 Score = 36.6 bits (83), Expect = 0.053 Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFS-LDLSKTEALTQAFR 452 G + R VLL G PG GKT LA IA L + P VAA E+ S + + L + F Sbjct: 293 GVVPPRGVLLHGPPGCGKTLLAHAIAGEL--DLPILKVAAPEIVSGVSGESEQKLRELFD 350 Query: 453 RAI 461 +A+ Sbjct: 351 QAV 353
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 40.0 bits (92), Expect = 0.005 Identities = 21/41 (51%), Positives = 25/41 (60%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + +LL G PGTGKT LA IA A+ PF SVA SE + Sbjct: 220 KGILLVGPPGTGKTLLAKAIANE--ADVPFFSVAGSEFVEM 258
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 40.0 bits (92), Expect = 0.005 Identities = 23/52 (44%), Positives = 32/52 (61%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQA 446 R +LL G PGTGKT +A +A + + F SV+AS L S L ++E L +A Sbjct: 505 RGMLLFGPPGTGKTMIAKAVATE--SNSTFFSVSASSLLSKYLGESEKLVRA 554
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 39.7 bits (91), Expect = 0.006 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQA 446 + G + +LL G PGTGKT LA +A GA F +V E+ S + ++E A+ + Sbjct: 515 KSGVTPPKGILLFGPPGTGKTMLAKAVATESGAN--FIAVRGPEILSKWVGESEKAIREI 572 Query: 447 FRRA 458 FR+A Sbjct: 573 FRKA 576 Score = 35.0 bits (79), Expect = 0.16 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQAFRRA 458 + +LL G PGTGKT LA +A +GA F +V E+ S ++E + + F+ A Sbjct: 247 KGILLYGPPGTGKTLLARALANEIGAY--FITVNGPEIMSKFYGESEQRIREIFKEA 301
>RUVB_MOOTA (Q2RHT7) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 336 Score = 39.7 bits (91), Expect = 0.006 Identities = 29/86 (33%), Positives = 40/86 (46%) Frame = +3 Query: 144 IGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGT 323 + + H L+ S+ R +E +GQ + G+ +Q R+ A VLL G PG Sbjct: 7 VAGNLHNEDQELELSLRPRCLAE-YIGQEHVKETLGIFIQAARERGEALDHVLLYGPPGL 65 Query: 324 GKTALAMGIAKSLGAETPFASVAASE 401 GKT LA IA LG + S A E Sbjct: 66 GKTTLAGIIANELGVQLRVTSGPALE 91
>RUVB_NOCFA (Q5YTE8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 357 Score = 39.7 bits (91), Expect = 0.006 Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Frame = +3 Query: 180 DSSIEAR---DASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGI 350 D IEA + + +GQ R L+L+ +Q VLL+G PG GKT++AM I Sbjct: 17 DGEIEASLRPKSLDDFIGQPRVREQLALVLRGAKQRGSTPDHVLLSGPPGLGKTSMAMII 76 Query: 351 AKSLGAETPFASVAASE 401 A LG S A E Sbjct: 77 AAELGTALRITSGPALE 93
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 39.7 bits (91), Expect = 0.006 Identities = 23/52 (44%), Positives = 32/52 (61%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQA 446 R +LL G PGTGKT LA +A + + F S++AS L S L ++E L +A Sbjct: 639 RGMLLFGPPGTGKTMLARAVATE--SHSTFFSISASSLTSKYLGESEKLVRA 688
>RUVB_MYCLE (P40833) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 349 Score = 39.7 bits (91), Expect = 0.006 Identities = 26/75 (34%), Positives = 37/75 (49%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 +D S+ R E +GQ R L+++ + +LL+G PG GKT+LAM IA Sbjct: 21 IDVSLRPRSLRE-FIGQPRVREQLQLVIEGAKNRGATPDHILLSGPPGLGKTSLAMIIAA 79 Query: 357 SLGAETPFASVAASE 401 LG+ S A E Sbjct: 80 ELGSSLRMTSGPALE 94
>RUVB_BIFLO (Q8G6B7) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 354 Score = 39.7 bits (91), Expect = 0.006 Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 8/88 (9%) Frame = +3 Query: 213 GMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSL--------GA 368 G +GQ + L L R+ + +LLAG PG GKT LAM +A L G Sbjct: 44 GFIGQPRLKAQLQLFLDAARKRDVPPDHILLAGPPGLGKTTLAMIVANELEVPIRVTSGP 103 Query: 369 ETPFASVAASELFSLDLSKTEALTQAFR 452 A AS L SLD+ + + + R Sbjct: 104 AVQHAGDLASILSSLDVGEVLFIDEIHR 131
>RUVB_STRCO (Q9L291) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 357 Score = 39.3 bits (90), Expect = 0.008 Identities = 24/75 (32%), Positives = 38/75 (50%) Frame = +3 Query: 144 IGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGT 323 +GA + +++++ +D E +GQ R L+L+ R VLL+G PG Sbjct: 17 VGAAADGEDQAVEAALRPKDLGE-FIGQEKVREQLDLVLRAARARGATADHVLLSGAPGL 75 Query: 324 GKTALAMGIAKSLGA 368 GKT L+M IA + A Sbjct: 76 GKTTLSMIIAAEMEA 90
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 39.3 bits (90), Expect = 0.008 Identities = 22/41 (53%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + LL G PGTGKT LA +A G TPF S AASE L Sbjct: 287 KGCLLVGPPGTGKTLLARAVAGEAG--TPFFSCAASEFVEL 325
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 39.3 bits (90), Expect = 0.008 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQA 446 R G VLL G PGTGKT +A +A A F SV +L S + ++E A+ Q Sbjct: 490 RMGVEPPAGVLLYGPPGTGKTLMAKAVANETNAN--FISVRGPQLLSKWVGESEKAIRQT 547 Query: 447 FRRA 458 FR+A Sbjct: 548 FRKA 551 Score = 35.0 bits (79), Expect = 0.16 Identities = 20/47 (42%), Positives = 26/47 (55%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE 431 + VLL G PGTGKT LA +A A F S+A E+ S ++E Sbjct: 224 QGVLLHGPPGTGKTLLAKAVANETSAS--FFSIAGPEIISKYYGESE 268
>CLPL_LACLA (Q06716) ATP-dependent protease ATP-binding subunit clpL| Length = 763 Score = 39.3 bits (90), Expect = 0.008 Identities = 20/48 (41%), Positives = 30/48 (62%) Frame = +3 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 LL G+ G GKTA+ G+A+ + A ++ E++S+DLS EA TQ Sbjct: 178 LLVGESGVGKTAVVEGLAQRIVAGKVPETIQDKEIYSIDLSSLEAGTQ 225
>RUVB_RHOPA (P61536) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 349 Score = 38.9 bits (89), Expect = 0.011 Identities = 24/62 (38%), Positives = 34/62 (54%) Frame = +3 Query: 180 DSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKS 359 D+++ ++ SE VGQ AR + + R+ K A VL G PG GKT LA +A+ Sbjct: 19 DAALRPQNLSE-FVGQQQARANLQVFIDAARKRKEALDHVLFVGPPGLGKTTLAQIVARE 77 Query: 360 LG 365 LG Sbjct: 78 LG 79
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 38.9 bits (89), Expect = 0.011 Identities = 22/61 (36%), Positives = 35/61 (57%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALT 440 QL G+ +LL G PGTGK+ LA +A G + F S+++S+L S + ++E L Sbjct: 153 QLFSHGRKPWSGILLYGPPGTGKSYLAKAVATEAG--STFFSISSSDLVSKWMGESERLV 210 Query: 441 Q 443 + Sbjct: 211 R 211
>RUVB_BRAJA (Q89U80) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 351 Score = 38.9 bits (89), Expect = 0.011 Identities = 23/62 (37%), Positives = 34/62 (54%) Frame = +3 Query: 180 DSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKS 359 D+++ + S+ VGQ AR+ + ++ R+ A VL G PG GKT LA +AK Sbjct: 21 DTALRPQSLSD-FVGQQQARKNLSIFIEAARKRGEALDHVLFVGPPGLGKTTLAQIVAKE 79 Query: 360 LG 365 LG Sbjct: 80 LG 81
>RUVB_COREF (Q8FPK5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 360 Score = 38.5 bits (88), Expect = 0.014 Identities = 23/61 (37%), Positives = 31/61 (50%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAAS 398 +GQ R L+L ++ + VLL+G PG GKT +AM IA+ LG S A Sbjct: 52 IGQPKVRDQLSLVLTGAKKRGVVPDHVLLSGPPGLGKTTMAMIIAQELGTSLRMTSGPAL 111 Query: 399 E 401 E Sbjct: 112 E 112
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 38.5 bits (88), Expect = 0.014 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Frame = +3 Query: 225 QLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 QLP R +L +G +L G PGTGKT LA IA F SV EL Sbjct: 1047 QLPLERP-----ELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEFSLN--FFSVKGPEL 1099 Query: 405 FSLDLSKTEA-LTQAFRRAIGVR 470 ++ + ++EA + + F+RA R Sbjct: 1100 LNMYIGESEANVRRVFQRARDAR 1122
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 38.5 bits (88), Expect = 0.014 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 R VLL G PGTGKT LA IA G PF S++ SE + Sbjct: 245 RGVLLIGPPGTGKTLLAKAIAGEAG--VPFFSISGSEFVEM 283
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 38.5 bits (88), Expect = 0.014 Identities = 23/58 (39%), Positives = 30/58 (51%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 + +R G + VL G PGTGKT LA IA A F SV EL S+ ++E+ Sbjct: 522 KFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSAN--FISVKGPELLSMWFGESES 577 Score = 33.9 bits (76), Expect = 0.35 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRA 458 R +L+ G PGTGKT +A +A GA F + E+ S ++E+ L +AF A Sbjct: 259 RGILMYGPPGTGKTLMARAVANETGAF--FFLINGPEIMSKMAGESESNLRKAFEEA 313
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 38.1 bits (87), Expect = 0.018 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Frame = +3 Query: 225 QLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 QLP R +L +G +L G PGTGKT LA IA F SV EL Sbjct: 1008 QLPLERP-----ELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEYSLN--FFSVKGPEL 1060 Query: 405 FSLDLSKTEA-LTQAFRRAIGVR 470 ++ + ++EA + + F+RA R Sbjct: 1061 LNMYIGESEANVRRVFQRARDAR 1083
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 38.1 bits (87), Expect = 0.018 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Frame = +3 Query: 225 QLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 QLP R +L +G +L G PGTGKT LA IA F SV EL Sbjct: 1011 QLPLERP-----ELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEYSLN--FFSVKGPEL 1063 Query: 405 FSLDLSKTEA-LTQAFRRAIGVR 470 ++ + ++EA + + F+RA R Sbjct: 1064 LNMYIGESEANVRRVFQRARDAR 1086
>RUVB_MYCTU (P66753) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 344 Score = 38.1 bits (87), Expect = 0.018 Identities = 26/75 (34%), Positives = 37/75 (49%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 +D S+ R E +GQ R L+++ + +LL+G PG GKT+LAM IA Sbjct: 20 IDVSLRPRSLRE-FIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAA 78 Query: 357 SLGAETPFASVAASE 401 LG+ S A E Sbjct: 79 ELGSSLRVTSGPALE 93
>RUVB_MYCBO (P66754) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 344 Score = 38.1 bits (87), Expect = 0.018 Identities = 26/75 (34%), Positives = 37/75 (49%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 +D S+ R E +GQ R L+++ + +LL+G PG GKT+LAM IA Sbjct: 20 IDVSLRPRSLRE-FIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAA 78 Query: 357 SLGAETPFASVAASE 401 LG+ S A E Sbjct: 79 ELGSSLRVTSGPALE 93
>RUVB_MYCPA (P61535) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 351 Score = 38.1 bits (87), Expect = 0.018 Identities = 26/75 (34%), Positives = 37/75 (49%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 +D S+ R E +GQ R L+++ + +LL+G PG GKT+LAM IA Sbjct: 24 IDVSLRPRSLRE-FIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAA 82 Query: 357 SLGAETPFASVAASE 401 LG+ S A E Sbjct: 83 ELGSSLRVTSGPALE 97
>RUVB_CORGL (Q9AE09) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 360 Score = 38.1 bits (87), Expect = 0.018 Identities = 23/61 (37%), Positives = 30/61 (49%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAAS 398 +GQ R L+L + + VLL+G PG GKT +AM IA+ LG S A Sbjct: 52 IGQPKVRDQLSLVLTGAKNRGVVPDHVLLSGPPGLGKTTMAMIIAQELGTSLRMTSGPAL 111 Query: 399 E 401 E Sbjct: 112 E 112
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 38.1 bits (87), Expect = 0.018 Identities = 22/51 (43%), Positives = 31/51 (60%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 R +LL G PGTGK+ LA +A T F SV++S+L S L ++E L + Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNST-FFSVSSSDLMSKWLGESEKLVK 210
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 38.1 bits (87), Expect = 0.018 Identities = 22/51 (43%), Positives = 31/51 (60%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 R +LL G PGTGK+ LA +A T F SV++S+L S L ++E L + Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNST-FFSVSSSDLMSKWLGESEKLVK 210
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 37.7 bits (86), Expect = 0.024 Identities = 20/41 (48%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA IA G PF S++ SE + Sbjct: 207 KGVLLVGPPGTGKTLLAKAIAGEAG--VPFFSISGSEFVEM 245
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 37.7 bits (86), Expect = 0.024 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 G + VLL G PGTGKT LA IA A PF S++ SE + Sbjct: 200 GATIPKGVLLVGPPGTGKTLLAKAIAGE--ASAPFFSISGSEFVEM 243
>RUVB_TROWT (Q83MZ8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 345 Score = 37.7 bits (86), Expect = 0.024 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIR-QGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFAS 386 VGQ + L++Q + QG++ A LLAG PG GKT LAM +A G +S Sbjct: 35 VGQNKVKNQLALLIQAAKIQGRVTDHA-LLAGPPGLGKTTLAMIVAAECGVSIRMSS 90
>RUVB_TROW8 (Q83HN0) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 345 Score = 37.7 bits (86), Expect = 0.024 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIR-QGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFAS 386 VGQ + L++Q + QG++ A LLAG PG GKT LAM +A G +S Sbjct: 35 VGQNKVKNQLALLIQAAKIQGRVTDHA-LLAGPPGLGKTTLAMIVAAECGVSIRMSS 90
>MGS1_YEAST (P40151) DNA-dependent ATPase MGS1 (Maintenance of genome stability| protein 1) Length = 587 Score = 37.7 bits (86), Expect = 0.024 Identities = 24/68 (35%), Positives = 39/68 (57%) Frame = +3 Query: 249 GLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKT 428 G + + I+QG I +++L G PG GKT+LA + K+ + ++V S F ++ S T Sbjct: 159 GTLFKYIKQGTIP--SMILWGPPGVGKTSLARLLTKTATTSSNESNV-GSRYFMIETSAT 215 Query: 429 EALTQAFR 452 +A TQ R Sbjct: 216 KANTQELR 223
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 37.7 bits (86), Expect = 0.024 Identities = 20/41 (48%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA IA G PF S++ SE + Sbjct: 206 KGVLLVGPPGTGKTLLAKAIAGEAG--VPFFSISGSEFVEM 244
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 37.7 bits (86), Expect = 0.024 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRA 458 R +LL G PGTGKT LA +A A F SV EL S + ++E + + FR+A Sbjct: 490 RGILLFGPPGTGKTLLAKAVANESNAN--FISVKGPELLSKWVGESEKHVREMFRKA 544 Score = 32.7 bits (73), Expect = 0.77 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQAFRRA 458 + VLL G PGTGKT +A +A + A F ++ E+ S ++E L + F A Sbjct: 217 KGVLLYGPPGTGKTLIAKAVANEVDAH--FIPISGPEIMSKYYGESEQRLREIFEEA 271
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 37.7 bits (86), Expect = 0.024 Identities = 20/41 (48%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA IA G PF S++ SE + Sbjct: 207 KGVLLVGPPGTGKTLLAKAIAGEAG--VPFFSISGSEFVEM 245
>RUVB_RHIME (Q92M92) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 37.7 bits (86), Expect = 0.024 Identities = 25/67 (37%), Positives = 33/67 (49%) Frame = +3 Query: 165 RGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAM 344 RG LD+++ + E GQ AR + ++ R A VL G PG GKT LA Sbjct: 13 RGEDLDATMRPQTLDE-FTGQAEARANLKIFIEAARNRGEALDHVLFVGPPGLGKTTLAQ 71 Query: 345 GIAKSLG 365 +AK LG Sbjct: 72 IMAKELG 78
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 37.4 bits (85), Expect = 0.031 Identities = 19/41 (46%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA +A G PF S++ SE + Sbjct: 195 KGVLLVGPPGTGKTLLAKAVAGEAG--VPFFSISGSEFVEM 233
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 37.4 bits (85), Expect = 0.031 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + LL G PGTGKT LA +A G PF S AASE L Sbjct: 284 KGCLLVGPPGTGKTLLARAVAGEAG--VPFFSCAASEFVEL 322
>RUVB_LEIXX (Q6AFB4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 347 Score = 37.4 bits (85), Expect = 0.031 Identities = 23/61 (37%), Positives = 31/61 (50%) Frame = +3 Query: 171 LGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGI 350 L + ++ R +E VGQ R L+L R + +LLAG PG GKT LAM + Sbjct: 18 LAFEGALRPRTLAE-FVGQAKVRGQLQLLLTAARMQERTADHILLAGPPGLGKTTLAMIV 76 Query: 351 A 353 A Sbjct: 77 A 77
>NIFA_KLEPN (P03027) Nif-specific regulatory protein| Length = 524 Score = 37.4 bits (85), Expect = 0.031 Identities = 29/73 (39%), Positives = 36/73 (49%) Frame = +3 Query: 132 RIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAG 311 RIER A + RG GL E MVG+ PA R I+ +IRQ VL+ G Sbjct: 194 RIERPRACTPSRGFGL----------ENMVGKSPAMRQ---IMDIIRQVSRWDTTVLVRG 240 Query: 312 QPGTGKTALAMGI 350 + GTGK +A I Sbjct: 241 ESGTGKELIANAI 253
>NIFA_KLEOX (P56266) Nif-specific regulatory protein| Length = 524 Score = 37.4 bits (85), Expect = 0.031 Identities = 28/73 (38%), Positives = 36/73 (49%) Frame = +3 Query: 132 RIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAG 311 R+ER A + RG GL E MVG+ PA R I+ +IRQ VL+ G Sbjct: 194 RVERPRACTSSRGFGL----------ENMVGKSPAMRQ---IMDIIRQVSRWDTTVLVRG 240 Query: 312 QPGTGKTALAMGI 350 + GTGK +A I Sbjct: 241 ESGTGKELIANAI 253
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 37.4 bits (85), Expect = 0.031 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + LL G PGTGKT LA +A G PF S AASE L Sbjct: 264 KGCLLVGPPGTGKTLLARAVAGEAG--VPFFSCAASEFVEL 302
>RUVB_NITWN (Q3SP14) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 348 Score = 37.4 bits (85), Expect = 0.031 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Frame = +3 Query: 126 LTRIERIGA-HSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVL 302 +T RI A H +G D+++ + SE +GQ AR + + R+ + A VL Sbjct: 1 MTEASRIVAPERHADDVG-DTALRPQKLSE-FIGQRQARANLQIFIDAARKREEALDHVL 58 Query: 303 LAGQPGTGKTALAMGIAKSLG 365 G PG GKT LA +A+ LG Sbjct: 59 FVGPPGLGKTTLAQIVARELG 79
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 37.4 bits (85), Expect = 0.031 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + LL G PGTGKT LA +A G PF S AASE L Sbjct: 287 KGCLLVGPPGTGKTLLARAVAGEAG--VPFFSCAASEFVEL 325
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 37.4 bits (85), Expect = 0.031 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + LL G PGTGKT LA +A G PF S AASE L Sbjct: 296 KGCLLVGPPGTGKTLLARAVAGEAG--VPFFSCAASEFVEL 334
>LON_RHIME (O69177) ATP-dependent protease La (EC 3.4.21.53)| Length = 806 Score = 37.4 bits (85), Expect = 0.031 Identities = 18/34 (52%), Positives = 21/34 (61%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAE 371 R KI G + L G PG GKT+LA IAK+ G E Sbjct: 346 RSSKIKGPILCLVGPPGVGKTSLAKSIAKATGRE 379
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 37.4 bits (85), Expect = 0.031 Identities = 21/51 (41%), Positives = 31/51 (60%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 R +LL G PGTGK+ LA +A T F S+++S+L S L ++E L + Sbjct: 168 RGILLFGPPGTGKSYLAKAVATEANNST-FFSISSSDLVSKWLGESEKLVK 217
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 37.4 bits (85), Expect = 0.031 Identities = 21/51 (41%), Positives = 31/51 (60%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 R +LL G PGTGK+ LA +A T F S+++S+L S L ++E L + Sbjct: 168 RGILLFGPPGTGKSYLAKAVATEANNST-FFSISSSDLVSKWLGESEKLVK 217
>LON_MYCSM (O31147) ATP-dependent protease La (EC 3.4.21.53)| Length = 779 Score = 37.4 bits (85), Expect = 0.031 Identities = 28/86 (32%), Positives = 40/86 (46%) Frame = +3 Query: 105 RLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKI 284 R +S DL R I H GL D + +V L R AA + G+ Sbjct: 293 RTEDSTDLARAREILDTDH-HGLS--------DVKDRIVEYLAVRGAAPQRGMAVVGGRG 343 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSL 362 +G ++LAG PG GKT+L +A++L Sbjct: 344 SGAVMVLAGPPGVGKTSLGESVARAL 369
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 37.4 bits (85), Expect = 0.031 Identities = 20/41 (48%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA IA A PF S++ SE + Sbjct: 188 KGVLLVGPPGTGKTLLAKAIAGE--ASVPFFSISGSEFVEM 226
>RUVB_CARHZ (Q3ABY0) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 339 Score = 37.0 bits (84), Expect = 0.041 Identities = 25/72 (34%), Positives = 34/72 (47%) Frame = +3 Query: 186 SIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 S+ R SE +GQ + + ++ ++ A VLL G PG GKT LA IA LG Sbjct: 19 SLRPRRLSE-YIGQQKVKETISIFIEAAKKRNEALDHVLLFGPPGLGKTTLATIIANELG 77 Query: 366 AETPFASVAASE 401 + S A E Sbjct: 78 VDIKITSGPALE 89
>PDR12_ORYSA (Q5Z9S8) Pleiotropic drug resistance protein 12| Length = 1500 Score = 37.0 bits (84), Expect = 0.041 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 L+++ +A+ G+VG P R+A IL+ + R LL G P +GKT L + +A Sbjct: 171 LNTARNIAEAALGLVGVRPGRQATLTILRGVSGAVRPSRMTLLLGPPSSGKTTLLLALAG 230 Query: 357 SL 362 L Sbjct: 231 KL 232
>RUVB_DEHE1 (Q3Z8V1) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 349 Score = 37.0 bits (84), Expect = 0.041 Identities = 27/75 (36%), Positives = 37/75 (49%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 LD+S+ R S+ +GQ + G+ +Q +Q A VLL G PG GKT L+ IA Sbjct: 20 LDTSLRPRCLSD-FIGQKRLKDNLGVAIQAAKQRGEALDHVLLYGPPGLGKTTLSHIIAL 78 Query: 357 SLGAETPFASVAASE 401 +G S A E Sbjct: 79 EMGVNIRITSGPAIE 93
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 36.6 bits (83), Expect = 0.053 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-L 437 +L G +L G PGTGKT LA +A + F SV EL ++ + ++EA + Sbjct: 747 ELFASGMKKRSGILFYGPPGTGKTLLAKAVATNFSLN--FFSVKGPELLNMYIGESEANV 804 Query: 438 TQAFRRA 458 + F+RA Sbjct: 805 RRVFQRA 811
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 36.6 bits (83), Expect = 0.053 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 + VL+ G PGTGKT LA +A G T F +V++S L S ++E L + Sbjct: 240 KGVLMVGPPGTGKTMLAKAVATECG--TTFFNVSSSTLTSKYRGESEKLVR 288
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 36.6 bits (83), Expect = 0.053 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 + VL+ G PGTGKT LA +A G T F +V++S L S ++E L + Sbjct: 240 KGVLMVGPPGTGKTMLAKAVATECG--TTFFNVSSSTLTSKYRGESEKLVR 288
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 36.6 bits (83), Expect = 0.053 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 + VL+ G PGTGKT LA +A G T F +V++S L S ++E L + Sbjct: 242 KGVLMVGPPGTGKTMLAKAVATECG--TTFFNVSSSTLTSKYRGESEKLVR 290
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 36.6 bits (83), Expect = 0.053 Identities = 22/58 (37%), Positives = 30/58 (51%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 Q + G + VL G PGTGKT LA +A + A F SV EL S+ ++E+ Sbjct: 512 QYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSAN--FISVKGPELLSMWYGESES 567 Score = 33.9 bits (76), Expect = 0.35 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRA 458 R VL+ G PGTGKT +A +A GA F + E+ S ++E+ L +AF A Sbjct: 249 RGVLMYGPPGTGKTLMARAVANETGAF--FFLINGPEVMSKMAGESESNLRKAFEEA 303
>RUVB_DEIRA (Q9X719) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 333 Score = 36.6 bits (83), Expect = 0.053 Identities = 28/75 (37%), Positives = 36/75 (48%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 LD+++ + +E VGQ + G+ LQ R + A LL G PG GKT LA IA Sbjct: 7 LDAALRPKTLTE-YVGQEKLKDKLGVYLQAARGRREALDHTLLFGPPGLGKTTLAHIIAY 65 Query: 357 SLGAETPFASVAASE 401 LG S A E Sbjct: 66 ELGVNIRVTSGPAIE 80
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 36.2 bits (82), Expect = 0.070 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +3 Query: 225 QLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 QLP L L L R G +LL G PGTGKT LA +A F SV EL Sbjct: 723 QLPLEHPELLSLGLRRSG------LLLHGPPGTGKTLLAKAVATE--CSLTFLSVKGPEL 774 Query: 405 FSLDLSKTEA-LTQAFRRA 458 ++ + ++E + + F RA Sbjct: 775 INMYVGQSEENVREVFARA 793
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 36.2 bits (82), Expect = 0.070 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-L 437 +L +G +L G PGTGKT LA IA + F SV EL ++ + ++EA + Sbjct: 837 ELFSKGMKKRSGILFYGPPGTGKTLLAKAIATNFALN--FFSVKGPELLNMYIGESEANV 894 Query: 438 TQAFRRA 458 + F++A Sbjct: 895 RRVFQKA 901
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 36.2 bits (82), Expect = 0.070 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +3 Query: 225 QLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 QLP L L L R G +LL G PGTGKT LA +A F SV EL Sbjct: 722 QLPLEHPELLSLGLRRSG------LLLHGPPGTGKTLLAKAVATE--CSLTFLSVKGPEL 773 Query: 405 FSLDLSKTEA-LTQAFRRA 458 ++ + ++E + + F RA Sbjct: 774 INMYVGQSEENVREVFARA 792
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 36.2 bits (82), Expect = 0.070 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Frame = +3 Query: 279 KIAGR---AVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 K+ GR VLL G+PG GKT LA IA A PF SV+ S+ + Sbjct: 182 KLGGRPPKGVLLYGEPGVGKTLLAKAIAGE--AHVPFISVSGSDFVEM 227
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 36.2 bits (82), Expect = 0.070 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +3 Query: 225 QLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 QLP L L L R G +LL G PGTGKT LA +A F SV EL Sbjct: 720 QLPLEHPELLSLGLRRSG------LLLHGPPGTGKTLLAKAVATE--CSLTFLSVKGPEL 771 Query: 405 FSLDLSKTEA-LTQAFRRA 458 ++ + ++E + + F RA Sbjct: 772 INMYVGQSEENVREVFARA 790
>DNAB_MYCTU (P71715) Replicative DNA helicase (EC 3.6.1.-) [Contains:| Endonuclease PI-MtuHIP (EC 3.1.-.-) (Mtu dnaB intein)] Length = 874 Score = 36.2 bits (82), Expect = 0.070 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = +3 Query: 258 LQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE 431 L + G G+ V++A +PG GK+ L + +S ASV +FSL++SK+E Sbjct: 209 LDEVTNGLHPGQMVIVAARPGVGKSTLGLDFMRSCSIRHRMASV----IFSLEMSKSE 262
>DNAB_MYCBO (P59966) Replicative DNA helicase (EC 3.6.1.-) [Contains:| Endonuclease PI-MboHIP (EC 3.1.-.-) (Mbo dnaB intein)] Length = 874 Score = 36.2 bits (82), Expect = 0.070 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = +3 Query: 258 LQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE 431 L + G G+ V++A +PG GK+ L + +S ASV +FSL++SK+E Sbjct: 209 LDEVTNGLHPGQMVIVAARPGVGKSTLGLDFMRSCSIRHRMASV----IFSLEMSKSE 262
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 36.2 bits (82), Expect = 0.070 Identities = 22/44 (50%), Positives = 24/44 (54%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASE 401 R G + VLL G PGTGKT LA IA A+ PF A SE Sbjct: 228 RLGGRLPKGVLLVGPPGTGKTLLARAIAGE--AQVPFFHTAGSE 269
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 36.2 bits (82), Expect = 0.070 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-L 437 +L G +L G PGTGKT LA IA + F SV EL ++ + ++EA + Sbjct: 726 ELFSSGMKKRSGILFYGPPGTGKTLLAKAIASNFSLN--FFSVKGPELLNMYIGESEANV 783 Query: 438 TQAFRRA 458 + F++A Sbjct: 784 RRVFQKA 790
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 36.2 bits (82), Expect = 0.070 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-L 437 +L G +L G PGTGKT LA IA + F SV EL ++ + ++EA + Sbjct: 843 ELFSNGIKKRSGILFYGPPGTGKTLLAKAIATNFALN--FFSVKGPELLNMYIGESEANV 900 Query: 438 TQAFRRA 458 + F+RA Sbjct: 901 RKVFQRA 907
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 36.2 bits (82), Expect = 0.070 Identities = 21/46 (45%), Positives = 26/46 (56%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI R VLL G PGTGKT LA +A A PF ++ S+ + Sbjct: 171 GKIP-RGVLLVGPPGTGKTLLARAVAGE--ASVPFFRISGSDFIEM 213
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 36.2 bits (82), Expect = 0.070 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA +A G PF S++ S+ + Sbjct: 200 KGVLLVGPPGTGKTLLARAVAGEAG--VPFFSISGSDFVEM 238
>RUVB_RHORT (Q2RVF5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 350 Score = 36.2 bits (82), Expect = 0.070 Identities = 22/63 (34%), Positives = 33/63 (52%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 +D+++ + ++ VGQ R G+ +Q R A VL G PG GKT LA +A+ Sbjct: 21 VDAALRPQSLAD-FVGQRQTRENLGVFVQAARARGEAMDHVLFHGPPGLGKTTLAQIVAR 79 Query: 357 SLG 365 LG Sbjct: 80 ELG 82
>LON1_BACSU (P37945) ATP-dependent protease La 1 (EC 3.4.21.53)| Length = 774 Score = 35.8 bits (81), Expect = 0.091 Identities = 17/28 (60%), Positives = 20/28 (71%) Frame = +3 Query: 282 IAGRAVLLAGQPGTGKTALAMGIAKSLG 365 + G + LAG PG GKT+LA IAKSLG Sbjct: 345 LKGPILCLAGPPGVGKTSLAKSIAKSLG 372
>RUVB_THIDA (Q3SGT3) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 341 Score = 35.8 bits (81), Expect = 0.091 Identities = 23/63 (36%), Positives = 33/63 (52%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 ++ ++ R +E VGQ AR + + R+ A VLL G PG GKT LA IA+ Sbjct: 20 IERALRPRTLAE-YVGQAKAREQLEIFIHAARKRSEALDHVLLFGPPGLGKTTLAHIIAR 78 Query: 357 SLG 365 +G Sbjct: 79 EMG 81
>RUVB_SYNSC (Q3AND8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 348 Score = 35.8 bits (81), Expect = 0.091 Identities = 21/61 (34%), Positives = 30/61 (49%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAAS 398 +GQ ++ G+ +Q A VLL G PG GKT +AM +A+ +G S A Sbjct: 46 IGQSELKQVLGIAVQAALGRGDALDHVLLYGPPGLGKTTMAMVLAEEMGVHCKVTSAPAL 105 Query: 399 E 401 E Sbjct: 106 E 106
>RUVB_NEIMA (Q9JUB0) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 343 Score = 35.8 bits (81), Expect = 0.091 Identities = 21/49 (42%), Positives = 27/49 (55%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 +GQ A+ + +Q ++ A VLL G PG GKT LA IAK LG Sbjct: 41 IGQHKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELG 89
>RUVB_NEIG1 (Q5F8L2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 343 Score = 35.8 bits (81), Expect = 0.091 Identities = 21/49 (42%), Positives = 27/49 (55%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 +GQ A+ + +Q ++ A VLL G PG GKT LA IAK LG Sbjct: 41 IGQHKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELG 89
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 35.8 bits (81), Expect = 0.091 Identities = 21/46 (45%), Positives = 26/46 (56%) Frame = +3 Query: 267 IRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 +R G + VLL G PGTGKT LA +A SLG F V +S + Sbjct: 159 LRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVN--FLKVVSSAI 202
>RUVB_LACAC (Q5FLX2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 349 Score = 35.8 bits (81), Expect = 0.091 Identities = 23/61 (37%), Positives = 29/61 (47%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAAS 398 +GQ ++ + ++ RQ A VLL G PG GKT LA IA LG S A Sbjct: 45 LGQKRVKKEMSIYIKAARQRDEALDHVLLYGPPGLGKTTLAFVIANELGVHLKSTSGPAI 104 Query: 399 E 401 E Sbjct: 105 E 105
>RUVB_RHIET (Q9L9C3) Holliday junction DNA helicase ruvB| Length = 346 Score = 35.8 bits (81), Expect = 0.091 Identities = 24/67 (35%), Positives = 32/67 (47%) Frame = +3 Query: 165 RGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAM 344 RG LD ++ + E GQ AR + ++ + A VL G PG GKT LA Sbjct: 13 RGEDLDITLRPQSLDE-FTGQAEARANLKVFIEAAKNRGEALDHVLFVGPPGLGKTTLAQ 71 Query: 345 GIAKSLG 365 +AK LG Sbjct: 72 IMAKELG 78
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 35.8 bits (81), Expect = 0.091 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 3/110 (2%) Frame = +3 Query: 51 TSKQXXXXXXEVIMAELKRLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMV--G 224 ++K I A L + S R+ +RI + A H + +DA EG++ Sbjct: 262 SAKNATSVAGRYIEARLGKPSLVRETSRISVLEALRHPIQVSRRLVSRPQDALEGVILSP 321 Query: 225 QLPAR-RAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAE 371 L AR R + + ++ K R VL+ G PGTGKT A +A G + Sbjct: 322 SLEARVRDIAIATRNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGMD 371
>RFCL_ARCFU (O29072) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) (afRFC large subunit) (afRFCla) Length = 479 Score = 35.8 bits (81), Expect = 0.091 Identities = 15/39 (38%), Positives = 26/39 (66%) Frame = +3 Query: 255 ILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAE 371 +++ + K + +LLAG PG GKT+LA+ +A ++G E Sbjct: 25 VIKWAKSWKRGSKPLLLAGPPGVGKTSLALALANTMGWE 63
>RUVB_NOVAD (Q2GBA2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 342 Score = 35.4 bits (80), Expect = 0.12 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 6/67 (8%) Frame = +3 Query: 183 SSIEARDAS------EGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAM 344 S IE +DA+ VGQ A+ + ++ +Q + A VL G PG GKT LA Sbjct: 11 SQIEDQDAALRPKTLAEFVGQAGAKDNLQVFIESAKQRREAMDHVLFFGPPGLGKTTLAQ 70 Query: 345 GIAKSLG 365 IA+ LG Sbjct: 71 IIARELG 77
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 35.4 bits (80), Expect = 0.12 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQA 446 R G + V+L G PGTGKT +A +A GA F S+ E+ S ++E L + Sbjct: 218 RLGITPPKGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREI 275 Query: 447 FRRA 458 F +A Sbjct: 276 FSKA 279 Score = 33.1 bits (74), Expect = 0.59 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQA 446 R G + LL G PG GKT LA +A A F S+ E+ S + ++E A+ + Sbjct: 495 RLGIRPSKGFLLYGPPGVGKTLLAKAVATESNAN--FISIKGPEVLSKWVGESEKAIREI 552 Query: 447 FRRA 458 F++A Sbjct: 553 FKKA 556
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 35.4 bits (80), Expect = 0.12 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%) Frame = +3 Query: 234 ARRAAGLILQLIRQ--------GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASV 389 A+ G I+ +R GKI + +L+ G PGTGKT LA IA A+ PF ++ Sbjct: 159 AKEEVGEIVDFLRDPNKFQNLGGKIP-KGILMVGPPGTGKTLLARAIAGE--AKVPFFTI 215 Query: 390 AASELFSL 413 + S+ + Sbjct: 216 SGSDFVEM 223
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/49 (40%), Positives = 31/49 (63%) Frame = +3 Query: 297 VLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 +LL G PGTGK+ LA +A A + F SV++S+L S + ++E L + Sbjct: 169 ILLYGPPGTGKSYLAKAVATE--ANSTFFSVSSSDLVSKWMGESEKLVK 215
>PDR2_ORYSA (Q8GU92) Probable pleiotropic drug resistance protein 2| Length = 1464 Score = 35.4 bits (80), Expect = 0.12 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Frame = +3 Query: 132 RIERIGAHSHIR----GLG--LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGR 293 R E + A + +R GL L+S + + +G LP ++ IL + R Sbjct: 141 RFEHLEAEAEVRVGNSGLPTVLNSMTNKLEGAANALGILPNKKQTMPILHDVSGIVKPRR 200 Query: 294 AVLLAGQPGTGKTALAMGIAKSLGAETPFA 383 LL G PG+GKT L + +A LG + F+ Sbjct: 201 MTLLLGPPGSGKTTLLLALAGRLGKDIKFS 230
>RUVB_NEIMB (Q9JZ86) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 343 Score = 35.4 bits (80), Expect = 0.12 Identities = 21/49 (42%), Positives = 27/49 (55%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 +GQ A+ + +Q ++ A VLL G PG GKT LA IAK LG Sbjct: 41 IGQDKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELG 89
>RUVB_SYNAS (Q2LRA8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 340 Score = 35.4 bits (80), Expect = 0.12 Identities = 19/49 (38%), Positives = 29/49 (59%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 VGQ ++ + ++ ++ K A VLL G PG GKT LA+ IA+ +G Sbjct: 31 VGQKKIKKTLPIFVEAAQKRKEALDHVLLYGPPGLGKTTLALIIAREMG 79
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 + VL+ G PGTGKT LA +A G T F +V+++ L S ++E L + Sbjct: 268 KGVLMVGPPGTGKTMLAKAVATECG--TTFFNVSSASLTSKYHGESEKLVR 316
>ERD1_ARATH (P42762) ERD1 protein, chloroplast precursor| Length = 945 Score = 35.4 bits (80), Expect = 0.12 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 11/87 (12%) Frame = +3 Query: 192 EARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAV-----------LLAGQPGTGKTAL 338 +A++ E L AR + GLI +I + K R + +L G+ G GKTA+ Sbjct: 266 KAKNVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGEAGVGKTAI 325 Query: 339 AMGIAKSLGAETPFASVAASELFSLDL 419 A G+A S+ + + + SLD+ Sbjct: 326 AEGLAISIAEASAPGFLLTKRIMSLDI 352
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 35.4 bits (80), Expect = 0.12 Identities = 19/41 (46%), Positives = 23/41 (56%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 R +L+G PGTGKT LA A A PF SV+ SE + Sbjct: 322 RGAILSGPPGTGKTLLAKATAGE--ANVPFLSVSGSEFVEM 360
>CLPB_HELHP (Q7VJY3) Chaperone clpB| Length = 859 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/53 (37%), Positives = 32/53 (60%) Frame = +3 Query: 264 LIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLS 422 LIR+ K +L G+PG GKTA+ G+A+ + A+ S+ +L +LD+S Sbjct: 194 LIRKSK---NNPILLGEPGVGKTAVVEGLAQRIVAKAVPTSLQNKKLIALDMS 243
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI + VL+ G PGTGKT LA IA A+ PF +++ S+ + Sbjct: 182 GKIP-KGVLMVGPPGTGKTLLAKAIAGE--AKVPFFTISGSDFVEM 224
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI + VL+ G PGTGKT LA IA A+ PF +++ S+ + Sbjct: 182 GKIP-KGVLMVGPPGTGKTLLAKAIAGE--AKVPFFTISGSDFVEM 224
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI + VL+ G PGTGKT LA IA A+ PF +++ S+ + Sbjct: 182 GKIP-KGVLMVGPPGTGKTLLAKAIAGE--AKVPFFTISGSDFVEM 224
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI + VL+ G PGTGKT LA IA A+ PF +++ S+ + Sbjct: 182 GKIP-KGVLMVGPPGTGKTLLAKAIAGE--AKVPFFTISGSDFVEM 224
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI + VL+ G PGTGKT LA IA A+ PF +++ S+ + Sbjct: 182 GKIP-KGVLMVGPPGTGKTLLAKAIAGE--AKVPFFTISGSDFVEM 224
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 35.4 bits (80), Expect = 0.12 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-L 437 +L G +L G PGTGKT LA IA + F SV EL ++ + ++EA + Sbjct: 863 ELFSNGLKKRSGILFYGPPGTGKTLLAKAIATNFSLN--FFSVKGPELLNMYIGESEANV 920 Query: 438 TQAFRRA 458 + F++A Sbjct: 921 RRVFQKA 927
>RUVB_PROMA (Q7V9Q4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 356 Score = 35.0 bits (79), Expect = 0.16 Identities = 20/61 (32%), Positives = 29/61 (47%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAAS 398 +GQ + G+ ++ K A VLL G PG GKT +A+ + LG + S A Sbjct: 49 IGQSALKEVLGISVKAALSRKEALDHVLLYGPPGLGKTTMALVLGNELGVKCRITSAPAL 108 Query: 399 E 401 E Sbjct: 109 E 109
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 35.0 bits (79), Expect = 0.16 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 + VL+ G PGTGKT LA +A +T F +V++S L S ++E L + Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATE--CKTTFFNVSSSTLTSKYRGESEKLVR 291
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 35.0 bits (79), Expect = 0.16 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 + VL+ G PGTGKT LA +A +T F +V++S L S ++E L + Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATE--CKTTFFNVSSSTLTSKYRGESEKLVR 291
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 35.0 bits (79), Expect = 0.16 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 + VL+ G PGTGKT LA +A +T F +V++S L S ++E L + Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATE--CKTTFFNVSSSTLTSKYRGESEKLVR 291
>RUVB_SYNS9 (Q3B0J1) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 347 Score = 35.0 bits (79), Expect = 0.16 Identities = 23/74 (31%), Positives = 36/74 (48%) Frame = +3 Query: 180 DSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKS 359 + S+ + SE +GQ ++ G+ ++ A VLL G PG GKT +A+ +A+ Sbjct: 34 EDSLRPKRLSE-YIGQSELKQVLGIAVEAALGRGEALDHVLLYGPPGLGKTTMALVLAEE 92 Query: 360 LGAETPFASVAASE 401 LG S A E Sbjct: 93 LGVNCRITSAPALE 106
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 35.0 bits (79), Expect = 0.16 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%) Frame = +3 Query: 216 MVGQLPARRAAGLILQLIRQGKIAG----RAVLLAGQPGTGKTALAMGIAKSLGAETPFA 383 ++GQ A++ +I++ + K+ G + VL G PGTGKT +A +A + F Sbjct: 126 IIGQEEAKKKCRIIMKYLENPKLFGEWAPKNVLFYGPPGTGKTLMARALATE--TNSSFI 183 Query: 384 SVAASEL 404 V A EL Sbjct: 184 LVKAPEL 190
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 35.0 bits (79), Expect = 0.16 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-L 437 +L G +L G PGTGKT +A IA + F SV EL ++ + ++EA + Sbjct: 756 ELFTSGMKKRSGILFYGPPGTGKTLMAKAIATNFSLN--FFSVKGPELLNMYIGESEANV 813 Query: 438 TQAFRRA 458 + F++A Sbjct: 814 RRVFQKA 820
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 35.0 bits (79), Expect = 0.16 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-L 437 +L G +L G PGTGKT LA IA + F SV EL ++ + ++EA + Sbjct: 742 ELFGSGLKKRSGILFYGPPGTGKTLLAKAIATNFSLN--FFSVKGPELLNMYIGESEANV 799 Query: 438 TQAFRRA 458 + F++A Sbjct: 800 RRVFQKA 806
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI + +L+ G PGTGKT LA IA A+ PF +++ S+ + Sbjct: 182 GKIP-KGILMVGPPGTGKTLLAKAIAGE--AKVPFFTISGSDFVEM 224
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/38 (50%), Positives = 23/38 (60%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 + V+L G+PGTGKT LA +A S A F V SEL Sbjct: 228 KGVILYGEPGTGKTLLAKAVANSTSA--TFLRVVGSEL 263
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI + +L+ G PGTGKT LA IA A+ PF +++ S+ + Sbjct: 182 GKIP-KGILMVGPPGTGKTLLAKAIAGE--AKVPFFTISGSDFVEM 224
>RUVB_DEHSC (Q3ZWZ9) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 349 Score = 35.0 bits (79), Expect = 0.16 Identities = 26/75 (34%), Positives = 36/75 (48%) Frame = +3 Query: 177 LDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAK 356 LD+S+ R + +GQ + G+ +Q +Q A VLL G PG GKT L+ IA Sbjct: 20 LDTSLRPRCLPD-FIGQKRLKDNLGVAIQAAKQRGEALDHVLLYGPPGLGKTTLSHIIAL 78 Query: 357 SLGAETPFASVAASE 401 +G S A E Sbjct: 79 EMGVNIRITSGPAIE 93
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 35.0 bits (79), Expect = 0.16 Identities = 18/39 (46%), Positives = 23/39 (58%) Frame = +3 Query: 297 VLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 VLL G PGTGKT LA +A G PF S++ S+ + Sbjct: 229 VLLEGPPGTGKTLLAKAVAGEAG--VPFYSISGSDFVEM 265
>RUVB_AGRT5 (Q8U9K6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 35.0 bits (79), Expect = 0.16 Identities = 22/67 (32%), Positives = 33/67 (49%) Frame = +3 Query: 165 RGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAM 344 RG +D+++ + + GQ AR + ++ + A VL G PG GKT LA Sbjct: 13 RGEDIDTTLRPQSLDD-FTGQAEARANLKVFIEAAKNRGEALDHVLFVGPPGLGKTTLAQ 71 Query: 345 GIAKSLG 365 +AK LG Sbjct: 72 IMAKELG 78
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 35.0 bits (79), Expect = 0.16 Identities = 18/39 (46%), Positives = 23/39 (58%) Frame = +3 Query: 297 VLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 VLL G PGTGKT LA +A G PF S++ S+ + Sbjct: 223 VLLEGPPGTGKTLLAKAVAGEAG--VPFFSISGSDFVEM 259
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 35.0 bits (79), Expect = 0.16 Identities = 18/39 (46%), Positives = 23/39 (58%) Frame = +3 Query: 297 VLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 VLL G PGTGKT LA +A G PF S++ S+ + Sbjct: 223 VLLEGPPGTGKTLLAKAVAGEAG--VPFFSISGSDFVEM 259
>CLPB1_SYNEL (Q8DJ40) Chaperone clpB 1| Length = 871 Score = 35.0 bits (79), Expect = 0.16 Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 1/114 (0%) Frame = +3 Query: 81 EVIMAELKRLSESRDLTRIERIGAHSHIRGLGLDSSIEARDAS-EGMVGQLPARRAAGLI 257 +V+ ++++ S+ +T G ++ + G D ++ AR + ++G+ R + Sbjct: 135 KVLREAIQQIRGSQKVTDQNPEGKYAALEKYGRDLTLLARQGKLDPVIGRDDEIRR---V 191 Query: 258 LQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDL 419 +Q++ + + VL+ G+PG GKTA+A G+A+ + A S+ +L +LD+ Sbjct: 192 IQILSR-RTKNNPVLI-GEPGVGKTAIAEGLAQRIVARDVPDSLRDRQLIALDM 243
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI + +L+ G PGTGKT LA IA A+ PF +++ S+ + Sbjct: 182 GKIP-KGILMVGPPGTGKTLLAKAIAGE--AKVPFFTISGSDFVEM 224
>CLP_TRYBB (P31543) Heat shock protein 100 (CLP protein)| Length = 868 Score = 35.0 bits (79), Expect = 0.16 Identities = 18/40 (45%), Positives = 26/40 (65%) Frame = +3 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDL 419 +L G+PG GKTA+A GIA+ + ++ + LFSLDL Sbjct: 201 ILIGEPGVGKTAIAEGIAQRIVRGDVPDTLLNTRLFSLDL 240
>RFCL_NANEQ (P60373) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 430 Score = 34.7 bits (78), Expect = 0.20 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +3 Query: 279 KIAGRAVLLAGQPGTGKTALAMGIAKSLGAE 371 K G+A+LL G PGTGKT+ +A LG E Sbjct: 65 KYKGKALLLYGPPGTGKTSSVYALANELGYE 95
>RUVB_BORPE (Q7VTT6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 357 Score = 34.7 bits (78), Expect = 0.20 Identities = 23/56 (41%), Positives = 28/56 (50%) Frame = +3 Query: 204 ASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAE 371 A E VGQ AR + + R+ A VLL G PG GKT LA IA +G + Sbjct: 38 ALEEYVGQQRAREQLEIFIAAARKRGEALDHVLLFGPPGLGKTTLAHIIAHEMGVQ 93
>RUVB_BORPA (Q7W4T6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 357 Score = 34.7 bits (78), Expect = 0.20 Identities = 23/56 (41%), Positives = 28/56 (50%) Frame = +3 Query: 204 ASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAE 371 A E VGQ AR + + R+ A VLL G PG GKT LA IA +G + Sbjct: 38 ALEEYVGQQRAREQLEIFIAAARKRGEALDHVLLFGPPGLGKTTLAHIIAHEMGVQ 93
>RUVB_BORBR (Q7WGB3) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 357 Score = 34.7 bits (78), Expect = 0.20 Identities = 23/56 (41%), Positives = 28/56 (50%) Frame = +3 Query: 204 ASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAE 371 A E VGQ AR + + R+ A VLL G PG GKT LA IA +G + Sbjct: 38 ALEEYVGQQRAREQLEIFIAAARKRGEALDHVLLFGPPGLGKTTLAHIIAHEMGVQ 93
>RUVB_SILPO (Q5LNT8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 341 Score = 34.7 bits (78), Expect = 0.20 Identities = 21/54 (38%), Positives = 27/54 (50%) Frame = +3 Query: 204 ASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 A + +GQ AR + +Q RQ A L G PG GKT LA +A+ LG Sbjct: 25 ALDEFIGQAEARANLRIFVQSARQRGEAMDHTLFHGPPGLGKTTLAQIMARELG 78
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 34.7 bits (78), Expect = 0.20 Identities = 21/46 (45%), Positives = 26/46 (56%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI + LL G PGTGKT LA IA A PF S++ S+ + Sbjct: 185 GKIP-KGCLLIGPPGTGKTLLAKAIAGE--ANVPFFSISGSDFVEM 227
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 34.7 bits (78), Expect = 0.20 Identities = 21/46 (45%), Positives = 26/46 (56%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 GKI + LL G PGTGKT LA IA A PF S++ S+ + Sbjct: 185 GKIP-KGCLLIGPPGTGKTLLAKAIAGE--ANVPFFSISGSDFVEM 227
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 34.7 bits (78), Expect = 0.20 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA A G PF S++ S+ + Sbjct: 195 KGVLLVGPPGTGKTLLAKACAGEAG--VPFFSISGSDFVEM 233
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 34.7 bits (78), Expect = 0.20 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFA 383 + VLL G PGTGKT LA +A ++GA F+ Sbjct: 216 KGVLLYGPPGTGKTLLAKAVAATIGANFIFS 246
>CLPB_BACNO (P17422) Chaperone clpB| Length = 860 Score = 34.7 bits (78), Expect = 0.20 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = +3 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 +L G+PG GKTA+ G+A+ + S+ L SLDL+ A T+ Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIADRAVPESLKGKRLLSLDLAALLAGTK 254
>CLPAA_LYCES (P31541) ATP-dependent Clp protease ATP-binding subunit clpA| homolog CD4A, chloroplast precursor Length = 926 Score = 34.7 bits (78), Expect = 0.20 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Frame = +3 Query: 204 ASEGMVGQLPARRAAGLILQLIRQGKIAGRAV----LLAGQPGTGKTALAMGIAKSLGAE 371 A EG + + R+A Q+ R +I GR L G+PG GKTA+A G+A+ + Sbjct: 268 AEEGKLDPVVGRQA-----QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 322 Query: 372 TPFASVAASELFSLDLSKTEALTQ 443 ++ ++ +LD+ A T+ Sbjct: 323 DVPETIEGKKVITLDMGLLVAGTK 346
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 34.7 bits (78), Expect = 0.20 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEALTQ 443 + VL+ G PGTGKT LA +A +T F ++++S L S ++E L + Sbjct: 240 KGVLMVGPPGTGKTLLAKAVATE--CKTTFFNISSSTLTSKYRGESEKLVR 288
>CLPB_HAEIN (P44403) Chaperone clpB| Length = 856 Score = 34.7 bits (78), Expect = 0.20 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 15/105 (14%) Frame = +3 Query: 150 AHSHIRG---LGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAV------- 299 A HIRG + ++ E+R A E L AR +G + +I + + RA+ Sbjct: 139 AIQHIRGGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRT 198 Query: 300 ----LLAGQPGTGKTALAMGIAKSL-GAETPFASVAASELFSLDL 419 +L G+PG GKTA+ G+A+ + E P + + SLD+ Sbjct: 199 KNNPVLIGEPGVGKTAIVEGLAQRIVNGEVP-EGLKNKRVLSLDM 242
>Y3456_MYCBO (P67172) Hypothetical UPF0079 protein Mb3456c| Length = 168 Score = 34.7 bits (78), Expect = 0.20 Identities = 17/34 (50%), Positives = 21/34 (61%) Frame = +3 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFAS 386 AG V+L+G G GKT LA GIA ++ E P S Sbjct: 43 AGDVVVLSGPLGAGKTVLAKGIAMAMDVEGPITS 76
>Y3422_MYCTU (P67171) Hypothetical UPF0079 protein Rv3422c/MT3531| Length = 168 Score = 34.7 bits (78), Expect = 0.20 Identities = 17/34 (50%), Positives = 21/34 (61%) Frame = +3 Query: 285 AGRAVLLAGQPGTGKTALAMGIAKSLGAETPFAS 386 AG V+L+G G GKT LA GIA ++ E P S Sbjct: 43 AGDVVVLSGPLGAGKTVLAKGIAMAMDVEGPITS 76
>RUVB_DECAR (Q478E5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 358 Score = 34.7 bits (78), Expect = 0.20 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Frame = +3 Query: 90 MAELKRLSESRDLTRIERIGAHS--HIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQ 263 M E +L+ + D T ++R+ A + L+ ++ + ++ GQ+ R + +Q Sbjct: 1 MIETDKLTPAVDRTNLDRVVAPQTKSAQEEALERALRPKRLAD-YTGQVKIREQLEIFIQ 59 Query: 264 LIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 R + VLL G PG GKT LA +A +G Sbjct: 60 AARNRSESLDHVLLFGPPGLGKTTLAHIVAAEMG 93
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 34.7 bits (78), Expect = 0.20 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = +3 Query: 297 VLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRA 458 +L G PGTGKT LA IA + F SV EL ++ + ++EA + + F++A Sbjct: 755 ILFYGPPGTGKTLLAKAIATTFSLN--FFSVKGPELLNMYIGESEANVRRVFQKA 807
>LON_CHLTR (O84348) ATP-dependent protease La (EC 3.4.21.53)| Length = 819 Score = 34.7 bits (78), Expect = 0.20 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 4/40 (10%) Frame = +3 Query: 255 ILQLIRQGKIA----GRAVLLAGQPGTGKTALAMGIAKSL 362 IL+LI GK+A G + L G PG GKT++ IAK L Sbjct: 370 ILELISVGKLANGMKGSIICLVGPPGVGKTSIGRSIAKVL 409
>LON_CHLMU (Q9PK50) ATP-dependent protease La (EC 3.4.21.53)| Length = 819 Score = 34.7 bits (78), Expect = 0.20 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 4/40 (10%) Frame = +3 Query: 255 ILQLIRQGKIA----GRAVLLAGQPGTGKTALAMGIAKSL 362 IL+LI GK+A G + L G PG GKT++ IAK L Sbjct: 370 ILELISVGKLANGMKGSIICLVGPPGVGKTSIGRSIAKVL 409
>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 34.7 bits (78), Expect = 0.20 Identities = 19/35 (54%), Positives = 21/35 (60%) Frame = +3 Query: 297 VLLAGQPGTGKTALAMGIAKSLGAETPFASVAASE 401 VLL G PG GKT LAM IA +G+E S A E Sbjct: 57 VLLYGPPGLGKTTLAMVIASEMGSEIKTTSGPAIE 91
>RUVB_BORA1 (Q2KVY2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 357 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/56 (39%), Positives = 28/56 (50%) Frame = +3 Query: 204 ASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAE 371 A + VGQ AR + + R+ A VLL G PG GKT LA IA +G + Sbjct: 38 ALQEYVGQQRAREQLEIFIAAARKRSEALDHVLLFGPPGLGKTTLAHIIAHEMGVQ 93
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 34.3 bits (77), Expect = 0.26 Identities = 20/43 (46%), Positives = 23/43 (53%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 G + + VLL G PGTGKT LA +A A F V SEL Sbjct: 178 GIVPPKGVLLYGPPGTGKTLLAKAVAYETNAS--FVRVVGSEL 218
>CLPB_CORGL (P53532) Chaperone clpB| Length = 852 Score = 34.3 bits (77), Expect = 0.26 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = +3 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 +L G+PG GKTA+ G+A+ + A S+ L SLDL A Sbjct: 204 VLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSMVA 248
>CLPB_COREF (Q8FM94) Chaperone clpB| Length = 852 Score = 34.3 bits (77), Expect = 0.26 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = +3 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 +L G+PG GKTA+ G+A+ + A S+ L SLDL A Sbjct: 204 VLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSMVA 248
>VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Protease) (EC| 3.4.21.97); Capsid assembly protein; Gene UL80 protein; Gene UL80.5 protein; C-terminal peptide] Length = 708 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -1 Query: 439 VRASVLERSREKSSEAATEANGVSAPSDLAMPMARAVLPV--PGCPARRTARPAIFPWRM 266 ++A+ ERS + S+AAT A G PS P PV P PA + PA P + Sbjct: 266 IKAASAERSGDSRSQAATPAAGARVPSSSPSPPVEPPSPVQPPALPASPSVLPAESPPSL 325 Query: 265 S 263 S Sbjct: 326 S 326
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 34.3 bits (77), Expect = 0.26 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 + ++ G + VL G PG GKT LA IA A F S+ EL ++ ++EA Sbjct: 502 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEA 557 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRA 458 R +LL G PGTGKT +A +A GA F + E+ S ++E+ L +AF A Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA 293
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 34.3 bits (77), Expect = 0.26 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 + ++ G + VL G PG GKT LA IA A F S+ EL ++ ++EA Sbjct: 501 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEA 556 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRA 458 R +LL G PGTGKT +A +A GA F + E+ S ++E+ L +AF A Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA 292
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 34.3 bits (77), Expect = 0.26 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 + ++ G + VL G PG GKT LA IA A F S+ EL ++ ++EA Sbjct: 501 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEA 556 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRA 458 R +LL G PGTGKT +A +A GA F + E+ S ++E+ L +AF A Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA 292
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 34.3 bits (77), Expect = 0.26 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 + ++ G + VL G PG GKT LA IA A F S+ EL ++ ++EA Sbjct: 501 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEA 556 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRA 458 R +LL G PGTGKT +A +A GA F + E+ S ++E+ L +AF A Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA 292
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 34.3 bits (77), Expect = 0.26 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = +3 Query: 261 QLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 + ++ G + VL G PG GKT LA IA A F S+ EL ++ ++EA Sbjct: 501 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEA 556 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRA 458 R +LL G PGTGKT +A +A GA F + E+ S ++E+ L +AF A Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA 292
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 34.3 bits (77), Expect = 0.26 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLG-------AETPFASVAASELFSLDLSKTEALTQ 443 R +LL G PGTGKT+L G+A+ L +++ + + LFS S++ L Q Sbjct: 173 RLILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQ 230
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 34.3 bits (77), Expect = 0.26 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA +A A PF S+ S + Sbjct: 210 KGVLLVGPPGTGKTLLAKAVAGE--ASVPFFSMGGSSFIEM 248
>CLPB_CORDI (Q6NF05) Chaperone clpB| Length = 849 Score = 34.3 bits (77), Expect = 0.26 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = +3 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 +L G+PG GKTA+ G+A+ + A S+ L SLDL A Sbjct: 204 VLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSMVA 248
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 34.3 bits (77), Expect = 0.26 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQA 446 R G A + VLL G PG KT A +A G F +V E+F+ + ++E A+ + Sbjct: 544 RLGISAPKGVLLYGPPGCSKTLTAKALATESGIN--FLAVKGPEIFNKYVGESERAIREI 601 Query: 447 FRRA 458 FR+A Sbjct: 602 FRKA 605 Score = 30.4 bits (67), Expect = 3.8 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 R +LL G PGTGKT L +A + A ++ + S L +TEA Sbjct: 280 RGILLHGPPGTGKTMLLRVVANTSNAHV--LTINGPSIVSKYLGETEA 325
>RUVB_SYNPX (Q7U9W7) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 348 Score = 34.3 bits (77), Expect = 0.26 Identities = 21/61 (34%), Positives = 30/61 (49%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAAS 398 +GQ ++ G+ +Q A VLL G PG GKT +A+ +A+ LG S A Sbjct: 45 IGQDELKQVLGIAVQAALGRGDALDHVLLYGPPGLGKTTMALVLAEELGVTCRITSAPAL 104 Query: 399 E 401 E Sbjct: 105 E 105
>RUVB_LACJO (P61533) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 339 Score = 34.3 bits (77), Expect = 0.26 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Frame = +3 Query: 120 RDLTRIERI-GAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRA 296 +D+ ERI GA S ++ S+ + ++ +GQ + + ++ +Q A Sbjct: 2 KDVNEEERIIGAESSEEDETIELSLRPQLLAQ-YIGQDKVKSEMKIYIKAAKQRDEALDH 60 Query: 297 VLLAGQPGTGKTALAMGIAKSLGAETPFASVAASE 401 VLL G PG GKT LA IA +G S A E Sbjct: 61 VLLYGPPGLGKTTLAFVIANEMGVHLKSTSGPAIE 95
>RUVB_XANOR (Q5H2A4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 345 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = +3 Query: 180 DSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKS 359 D+SI + ++ +GQ P R + +Q + A VL+ G PG GKT L+ IA Sbjct: 18 DASIRPKRLAD-YLGQQPVREQMEIYIQAAKARGEAMDHVLIFGPPGLGKTTLSHVIANE 76 Query: 360 LG 365 LG Sbjct: 77 LG 78
>RUVB_XANOM (Q2P575) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 345 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = +3 Query: 180 DSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKS 359 D+SI + ++ +GQ P R + +Q + A VL+ G PG GKT L+ IA Sbjct: 18 DASIRPKRLAD-YLGQQPVREQMEIYIQAAKARGEAMDHVLIFGPPGLGKTTLSHVIANE 76 Query: 360 LG 365 LG Sbjct: 77 LG 78
>RUVB_PROMM (Q7V910) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 352 Score = 34.3 bits (77), Expect = 0.26 Identities = 21/64 (32%), Positives = 31/64 (48%) Frame = +3 Query: 210 EGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASV 389 E +GQ ++ + ++ A VLL G PG GKT +AM +A+ LG + S Sbjct: 46 EDYIGQRELKQVLAIAVKAAMGRGDALDHVLLYGPPGLGKTTMAMVLAEELGVKCRVTSA 105 Query: 390 AASE 401 A E Sbjct: 106 PALE 109
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 34.3 bits (77), Expect = 0.26 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFS 410 R VLL G PG GKT++A +A L + PF S++A + S Sbjct: 240 RGVLLHGPPGCGKTSIANALAGEL--QVPFISISAPSVVS 277 Score = 33.5 bits (75), Expect = 0.45 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQAFR 452 G A VLL G PG GKT LA +A A F S+ EL + + ++E ++ Q F Sbjct: 563 GISAPGGVLLWGPPGCGKTLLAKAVANESRAN--FISIKGPELLNKYVGESERSIRQVFT 620 Query: 453 RA 458 RA Sbjct: 621 RA 622
>CLPA_RHOBL (P05444) ClpA homolog protein| Length = 793 Score = 34.3 bits (77), Expect = 0.26 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = +3 Query: 300 LLAGQPGTGKTALAMGIA-KSLGAETPFASVAASELFSLDLSKTEALTQ 443 LL G PG GKTA+A G+A K + E P ++ + +FSLD+ A T+ Sbjct: 241 LLVGDPGVGKTAIAEGLAWKIIKKEVP-EVLSGATIFSLDMGALLAGTR 288
>Y2027_MYCBO (P0A5G0) Hypothetical protein Mb2027c| Length = 498 Score = 34.3 bits (77), Expect = 0.26 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAE 371 R L+ G PGTGK+ LA G+A+ +GA+ Sbjct: 323 RLALVGGNPGTGKSTLARGVAELVGAQ 349
>Y2004_MYCTU (P0A5F9) Hypothetical protein Rv2004c/MT2060| Length = 498 Score = 34.3 bits (77), Expect = 0.26 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAE 371 R L+ G PGTGK+ LA G+A+ +GA+ Sbjct: 323 RLALVGGNPGTGKSTLARGVAELVGAQ 349
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 34.3 bits (77), Expect = 0.26 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = +3 Query: 267 IRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 ++ G R VL G PG GKT LA IA A F S+ EL ++ ++EA Sbjct: 509 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEA 562 Score = 32.7 bits (73), Expect = 0.77 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGA 368 R +LL G PGTGKT +A +A GA Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGA 269
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 34.3 bits (77), Expect = 0.26 Identities = 16/29 (55%), Positives = 18/29 (62%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETP 377 R +LL G PGTGKT +A I K L A P Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAREP 359 Score = 33.1 bits (74), Expect = 0.59 Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASE--LFSLDLSKTEALTQAFRRA 458 R V+LAG TGKT+LA +AKS ++ PF V + E + + +K AL +AF A Sbjct: 614 RTVVLAGAAKTGKTSLAAQMAKS--SDFPFVKVISPEDTVGFSESAKCMALKKAFEDA 669
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 34.3 bits (77), Expect = 0.26 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA +A G PF +++ S+ + Sbjct: 197 KGVLLYGPPGTGKTLLARAVAGEAG--VPFFTISGSDFVEM 235
>RUVB_XANC5 (Q3BQF5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = +3 Query: 180 DSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKS 359 D+SI + ++ +GQ P R + +Q + A VL+ G PG GKT L+ IA Sbjct: 19 DASIRPKRLAD-YLGQQPVREQMEIYIQAAKARGEAMDHVLIFGPPGLGKTTLSHVIANE 77 Query: 360 LG 365 LG Sbjct: 78 LG 79
>RUVB_XANAC (Q8PHV2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 34.3 bits (77), Expect = 0.26 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = +3 Query: 180 DSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKS 359 D+SI + ++ +GQ P R + +Q + A VL+ G PG GKT L+ IA Sbjct: 19 DASIRPKRLAD-YLGQQPVREQMEIYIQAAKARGEAMDHVLIFGPPGLGKTTLSHVIANE 77 Query: 360 LG 365 LG Sbjct: 78 LG 79
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 34.3 bits (77), Expect = 0.26 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA +A G PF +++ S+ + Sbjct: 197 KGVLLYGPPGTGKTLLARAVAGEAG--VPFFTISGSDFVEM 235
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 34.3 bits (77), Expect = 0.26 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA +A G PF +++ S+ + Sbjct: 197 KGVLLYGPPGTGKTLLARAVAGEAG--VPFFTISGSDFVEM 235
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 34.3 bits (77), Expect = 0.26 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = +3 Query: 267 IRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 ++ G R VL G PG GKT LA IA A F S+ EL ++ ++EA Sbjct: 510 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEA 563 Score = 31.6 bits (70), Expect = 1.7 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGA 368 R +LL G PGTGKT +A +A G+ Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGS 270
>RUVB_LACPL (Q88V03) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 336 Score = 34.3 bits (77), Expect = 0.26 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSL 362 +GQ + G+ ++ R+ + + VLL G PG GKT LAM IA + Sbjct: 32 IGQARVKHELGVYIEAARKREESLDHVLLYGPPGLGKTTLAMVIANEM 79
>LON_BUCAP (Q8K988) ATP-dependent protease La (EC 3.4.21.53)| Length = 777 Score = 34.3 bits (77), Expect = 0.26 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 R K+ G + L G PG GKT+L IAKS G Sbjct: 343 RTNKVKGPILCLIGPPGVGKTSLGKSIAKSTG 374
>LON_BUCAI (P57549) ATP-dependent protease La (EC 3.4.21.53)| Length = 777 Score = 34.3 bits (77), Expect = 0.26 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 R+ KI G + L G PG GKT+L IA+S G Sbjct: 343 RKNKIKGPILCLIGPPGVGKTSLGKSIARSTG 374
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 34.3 bits (77), Expect = 0.26 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA +A A PF S+ S + Sbjct: 204 KGVLLVGPPGTGKTLLAKAVAGE--AHVPFFSMGGSSFIEM 242
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 34.3 bits (77), Expect = 0.26 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA +A A PF S+ S + Sbjct: 204 KGVLLVGPPGTGKTLLAKAVAGE--AHVPFFSMGGSSFIEM 242
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 34.3 bits (77), Expect = 0.26 Identities = 19/41 (46%), Positives = 22/41 (53%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSL 413 + VLL G PGTGKT LA A G PF ++ SE L Sbjct: 208 KGVLLVGPPGTGKTLLAKAAAGEAG--VPFFIISGSEFVEL 246
>RUVB_PROAC (Q6A8K7) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 342 Score = 33.9 bits (76), Expect = 0.35 Identities = 21/55 (38%), Positives = 26/55 (47%) Frame = +3 Query: 222 GQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFAS 386 GQ GL+L + VLL+G PG GKT LAM IA + A +S Sbjct: 33 GQQRVADQLGLVLAASKSRGTTPDHVLLSGPPGLGKTTLAMIIASEMSAPIRISS 87
>RUVB_ZYMMO (Q5NR72) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 347 Score = 33.9 bits (76), Expect = 0.35 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = +3 Query: 180 DSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKS 359 D ++ R E +GQ AR + ++ ++ + + VL G PG GKT LA IA+ Sbjct: 17 DQALRPRSLDE-FIGQQAARENIRVFIEAAKKRQESLDHVLFFGPPGLGKTTLAQIIARE 75 Query: 360 LG 365 +G Sbjct: 76 MG 77
>RUVB_NITMU (Q2Y5G5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 347 Score = 33.9 bits (76), Expect = 0.35 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +3 Query: 219 VGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 +GQ R + ++ R+ + A VLL G PG GKT LA +AK +G Sbjct: 33 IGQEKIRGQLQIFIEAARRRREALDHVLLFGPPGLGKTTLAHIVAKEMG 81
>LON_ERWAM (P46067) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 R KI G + L G PG GKT+L IAK+ G Sbjct: 343 RVSKIKGPILCLVGPPGVGKTSLGQSIAKATG 374
>LON_ECOLI (P0A9M0) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 R KI G + L G PG GKT+L IAK+ G Sbjct: 343 RVNKIKGPILCLVGPPGVGKTSLGQSIAKATG 374
>LON_ECOL6 (P0A9M1) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 270 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 R KI G + L G PG GKT+L IAK+ G Sbjct: 343 RVNKIKGPILCLVGPPGVGKTSLGQSIAKATG 374
>LONH_MIMIV (Q5UPT0) Lon protease homolog (EC 3.4.21.-)| Length = 1023 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +3 Query: 252 LILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 L+ + I+ + +G+ + L G PG GKT LA GI+ +LG Sbjct: 496 LVGKWIQNPESSGQVIGLVGPPGVGKTLLAKGISAALG 533
>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A| Length = 634 Score = 33.9 bits (76), Expect = 0.35 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 3/110 (2%) Frame = +3 Query: 51 TSKQXXXXXXEVIMAELKRLSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMV--G 224 ++K I A L + S R+ +RI + A H + +DA EG+V Sbjct: 311 SAKNATLVAGRFIEARLGKPSLVRETSRITVLEALRHPIQVSRRLLSRPQDALEGVVLSP 370 Query: 225 QLPAR-RAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAE 371 L AR R + + ++ + R +L+ G PGTGKT A +A G + Sbjct: 371 SLEARVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLALHSGMD 420
>HSLU_HELPY (O25254) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 443 Score = 33.9 bits (76), Expect = 0.35 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 9/73 (12%) Frame = +3 Query: 210 EGMVGQLPARRAAGLI-------LQLIR--QGKIAGRAVLLAGQPGTGKTALAMGIAKSL 362 E ++GQ A+++ + LQL + Q +I + +L+ G G GKT +A IAK + Sbjct: 17 EYIIGQKEAKKSIAIAFRNRYRRLQLEKSLQEEITPKNILMIGSTGVGKTEIARRIAKIM 76 Query: 363 GAETPFASVAASE 401 E PF V AS+ Sbjct: 77 --ELPFVKVEASK 87
>HS104_YEAST (P31539) Heat shock protein 104| Length = 908 Score = 33.9 bits (76), Expect = 0.35 Identities = 17/44 (38%), Positives = 27/44 (61%) Frame = +3 Query: 303 LAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 L G+PG GKTA+ G+A+ + + + ++LFSLDL+ A Sbjct: 210 LIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTA 253
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 33.9 bits (76), Expect = 0.35 Identities = 19/38 (50%), Positives = 23/38 (60%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 + VLL G PGTGKT LA +A A+ F +AA EL Sbjct: 214 KGVLLYGPPGTGKTLLAKAVANH--ADATFIRLAAPEL 249
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 33.9 bits (76), Expect = 0.35 Identities = 20/48 (41%), Positives = 26/48 (54%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 + +LL G PG GKT LA IA A F SV EL ++ ++EA Sbjct: 969 KGILLYGPPGCGKTLLAKAIANECKAN--FISVKGPELLTMWFGESEA 1014 Score = 30.8 bits (68), Expect = 2.9 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQAFR 452 G A + VL+ G PGTGKT++A IA A + E+ S + ++E L + F+ Sbjct: 557 GISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYI--INGPEIMSKHIGESEQKLRKIFK 614 Query: 453 RA 458 +A Sbjct: 615 KA 616
>RUVB_GLUOX (Q5FQC4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 349 Score = 33.9 bits (76), Expect = 0.35 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +3 Query: 222 GQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 GQ +R + ++ R A VLL G PG GKT LA +A+ LG Sbjct: 32 GQKASRENLAIFIEAARARNEALDHVLLHGPPGLGKTTLAQIVARELG 79
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 33.9 bits (76), Expect = 0.35 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 1/118 (0%) Frame = +3 Query: 108 LSESRDLTRIERIGAHSHIRGLGLDSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIA 287 L + RDL ++IG +R + +D+ I+ + LP R+ G Sbjct: 831 LHKPRDLGW-DKIGGLHEVRQILMDT-IQLPAKYPELFANLPIRQRTG------------ 876 Query: 288 GRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTE-ALTQAFRRA 458 +LL G PGTGKT LA IA+ + F SV EL S + +E A+ F RA Sbjct: 877 ---ILLYGPPGTGKTLLAGVIARE--SRMNFISVKGPELLSKYIGASEQAVRDIFIRA 929
>CLPB2_ANASP (Q8YM56) Chaperone clpB 2| Length = 872 Score = 33.9 bits (76), Expect = 0.35 Identities = 17/40 (42%), Positives = 26/40 (65%) Frame = +3 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDL 419 +L G+PG GKTA+A G+A+ + A S+ +L SLD+ Sbjct: 205 VLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKLISLDM 244
>RADA_RICCN (Q92HG1) DNA repair protein radA homolog (DNA repair protein sms| homolog) Length = 444 Score = 33.9 bits (76), Expect = 0.35 Identities = 25/79 (31%), Positives = 39/79 (49%) Frame = +3 Query: 225 QLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 QL G +++ G + G A+L+ G PG GK+ L + +A AS AS++ Sbjct: 61 QLRIPTPIGEFNRVLGGGLVLGSAILIGGDPGIGKSTLLLQLA---------ASNFASKM 111 Query: 405 FSLDLSKTEALTQAFRRAI 461 L ++ E+L Q RAI Sbjct: 112 NCLYITGEESLDQIKLRAI 130
>Y2537_MYCLE (Q9CD28) Hypothetical protein ML2537| Length = 640 Score = 33.9 bits (76), Expect = 0.35 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 10/81 (12%) Frame = +3 Query: 234 ARRAAGLILQLIRQGK---IAGRA--VLLAGQPGTGKTALAMGIAK-----SLGAETPFA 383 +R + + ++L+R+ + +A RA ++ AG PGTGKT +A +AK L + Sbjct: 363 SRLKSSVAMELVRKQRGLMVAQRAHHLVFAGPPGTGKTTIARVVAKVYCGLGLLKKENIR 422 Query: 384 SVAASELFSLDLSKTEALTQA 446 V ++L + +TEA T A Sbjct: 423 EVHRADLIGQHIGETEAKTNA 443
>CLPX_AZOVI (P33683) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 440 Score = 33.5 bits (75), Expect = 0.45 Identities = 20/50 (40%), Positives = 28/50 (56%) Frame = +3 Query: 255 ILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASEL 404 + QL Q ++ +L+AG GTGKT L +A+ LG PFA A+ L Sbjct: 101 VCQLGEQVELEKSNILMAGPSGTGKTLLVRTLARILG--VPFAMADATTL 148
>LON_RICPR (Q9ZD92) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 33.5 bits (75), Expect = 0.45 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +3 Query: 264 LIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLG 365 L R KI G + L G PG GKT+L IA+ +G Sbjct: 341 LQRSSKIRGPILCLIGPPGVGKTSLVKSIAEGMG 374
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 33.5 bits (75), Expect = 0.45 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +3 Query: 297 VLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRAIGVR 470 +LL G PG GKT LA +A+ G F SV E+ + + +E + + F RA V+ Sbjct: 734 ILLYGYPGCGKTLLASAVAQQCGLN--FISVKGPEILNKFIGASEQNIRELFERAQSVK 790
>CLPB_STAES (Q8CPT5) Chaperone clpB| Length = 869 Score = 33.5 bits (75), Expect = 0.45 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +3 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLS 422 +L G+PG GKTA+ G+A+ + + S+ +F LDLS Sbjct: 202 VLIGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLS 242
>CLPB_STAEQ (Q5HQI5) Chaperone clpB| Length = 869 Score = 33.5 bits (75), Expect = 0.45 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +3 Query: 300 LLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLS 422 +L G+PG GKTA+ G+A+ + + S+ +F LDLS Sbjct: 202 VLIGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLS 242
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 33.5 bits (75), Expect = 0.45 Identities = 21/53 (39%), Positives = 26/53 (49%) Frame = +3 Query: 276 GKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA 434 G + VL G PG GKT LA IA A F SV EL ++ ++EA Sbjct: 511 GMSPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISVKGPELLTMWFGESEA 561 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 291 RAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASELFSLDLSKTEA-LTQAFRRA 458 + +LL G PG+GKT +A +A GA F + E+ S ++E+ L +AF A Sbjct: 243 KGILLYGPPGSGKTLIARAVANETGAF--FFCINGPEIMSKLAGESESNLRKAFEEA 297
>CLPB_XYLFT (Q87AX8) Chaperone clpB| Length = 861 Score = 33.5 bits (75), Expect = 0.45 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 12/92 (13%) Frame = +3 Query: 180 DSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAV-----------LLAGQPGTG 326 +++ E R A E L AR +G + +I + + R + +L G+PG G Sbjct: 152 ENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVG 211 Query: 327 KTALAMGIAKSL-GAETPFASVAASELFSLDL 419 KTA+ G+A+ + E P + + L SLDL Sbjct: 212 KTAIVEGLAQRIVNGEVP-EGLRSKRLLSLDL 242
>CLPB_XYLFA (Q9PGC1) Chaperone clpB| Length = 861 Score = 33.5 bits (75), Expect = 0.45 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 12/92 (13%) Frame = +3 Query: 180 DSSIEARDASEGMVGQLPARRAAGLILQLIRQGKIAGRAV-----------LLAGQPGTG 326 +++ E R A E L AR +G + +I + + R + +L G+PG G Sbjct: 152 ENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVG 211 Query: 327 KTALAMGIAKSL-GAETPFASVAASELFSLDL 419 KTA+ G+A+ + E P + + L SLDL Sbjct: 212 KTAIVEGLAQRIVNGEVP-EGLRSKRLLSLDL 242 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,984,943 Number of Sequences: 219361 Number of extensions: 931559 Number of successful extensions: 6266 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 5893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6255 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
