ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart20c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MS84C_DROME (Q01644) Male-specific sperm protein Mst84Dc 31 2.5
2DISI_AGKPI (P16338) Disintegrin applagin (Platelet aggregation a... 30 4.3
3KRA99_HUMAN (Q9BYP9) Keratin-associated protein 9-9 (Keratin-ass... 30 4.3
4KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-ass... 30 4.3
5KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-ass... 30 4.3
6KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-ass... 30 4.3
7PLAC8_HUMAN (Q9NZF1) Placenta-specific gene 8 protein (C15 protein) 30 4.3

>MS84C_DROME (Q01644) Male-specific sperm protein Mst84Dc|
          Length = 55

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 370 PCCDCCVHYCCEPC 411
           PC  CC +YCC PC
Sbjct: 5   PCGSCCGYYCCGPC 18



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>DISI_AGKPI (P16338) Disintegrin applagin (Platelet aggregation activation|
           inhibitor)
          Length = 71

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 11/43 (25%)
 Frame = +1

Query: 361 PDAPCCD-----------CCVHYCCEPCALVQEYKELKARGYD 456
           P+ PCCD           C    CC+ C  ++E    +ARG D
Sbjct: 11  PENPCCDAATCKLRPGAQCAEGLCCDQCKFMKEGTVCRARGDD 53



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>KRA99_HUMAN (Q9BYP9) Keratin-associated protein 9-9 (Keratin-associated protein|
           9.9) (Ultrahigh sulfur keratin-associated protein 9.9)
          Length = 154

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = +1

Query: 370 PCCD--CCVHYCCEPC 411
           PCC   CCV  CC+PC
Sbjct: 36  PCCQPSCCVSSCCQPC 51



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>KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-associated protein|
           9.4) (Ultrahigh sulfur keratin-associated protein 9.4)
          Length = 154

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = +1

Query: 370 PCCD--CCVHYCCEPC 411
           PCC   CCV  CC+PC
Sbjct: 36  PCCQPSCCVSSCCQPC 51



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>KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-associated protein|
           9.8) (Ultrahigh sulfur keratin-associated protein 9.8)
          Length = 159

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = +1

Query: 370 PCCD--CCVHYCCEPC 411
           PCC   CCV  CC+PC
Sbjct: 31  PCCQPSCCVSSCCQPC 46



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>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein|
           9.3) (Ultrahigh sulfur keratin-associated protein 9.3)
          Length = 159

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = +1

Query: 370 PCCD--CCVHYCCEPC 411
           PCC   CCV  CC+PC
Sbjct: 31  PCCQPSCCVSSCCQPC 46



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>PLAC8_HUMAN (Q9NZF1) Placenta-specific gene 8 protein (C15 protein)|
          Length = 115

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 319 SCTYRSKMRAQYALPDAPCCDCCVHYCCEPCALVQEYKELKAR 447
           S   R+  R +Y +P + C D     CC  C L Q  +++  R
Sbjct: 67  SVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRR 109


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,319,563
Number of Sequences: 219361
Number of extensions: 705947
Number of successful extensions: 2573
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2553
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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