ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart20c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 918 Score = 434 bits (219), Expect = e-118 Identities = 315/347 (90%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 232 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 gcggcggtggcggggagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 324 Query: 233 gcacgttccacgcgcggcgcgccaagctggagccccgggagaaggcggagctggcgcgcg 292 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 325 cgacgttccacgcgcggcgggccaagctggagccgcgggagaaggcggagctggcgcggg 384 Query: 293 agctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtggc 352 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 agctcgggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtggc 444 Query: 353 gcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgccctccacg 412 || |||||||| | ||||| |||| ||| | ||| |||||||| |||||||||||||||| Sbjct: 445 gctccaagcagatcgagcacgactacgccgcgctccgcgcccagtacgacgccctccacg 504 Query: 413 cccgcgtccagtcgctcaagcaggagaagctcaccctcgccgcgcagctggaagagctga 472 |||||||| ||||||||| ||||||||||||| ||||||| | ||| |||| ||||||| Sbjct: 505 cccgcgtcgagtcgctcaggcaggagaagctcgccctcgcagaccaggtggatgagctga 564 Query: 473 agaagaagttgaacgagcggcatgaccagagcgccagctgcggcggc 519 | |||| ||||||||||||| |||||||||| |||||||| |||| Sbjct: 565 gggggaagctgaacgagcggcaagaccagagcggcagctgcgacggc 611 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 74 aaatggagagcgactgccagttc 96 ||||||||||||||||||||||| Sbjct: 91 aaatggagagcgactgccagttc 113
>dbj|AK063685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-F01, full insert sequence Length = 918 Score = 434 bits (219), Expect = e-118 Identities = 315/347 (90%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 232 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 gcggcggtggcggggagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 324 Query: 233 gcacgttccacgcgcggcgcgccaagctggagccccgggagaaggcggagctggcgcgcg 292 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 325 cgacgttccacgcgcggcgggccaagctggagccgcgggagaaggcggagctggcgcggg 384 Query: 293 agctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtggc 352 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 agctcgggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtggc 444 Query: 353 gcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgccctccacg 412 || |||||||| | ||||| |||| ||| | ||| |||||||| |||||||||||||||| Sbjct: 445 gctccaagcagatcgagcacgactacgccgcgctccgcgcccagtacgacgccctccacg 504 Query: 413 cccgcgtccagtcgctcaagcaggagaagctcaccctcgccgcgcagctggaagagctga 472 |||||||| ||||||||| ||||||||||||| ||||||| | ||| |||| ||||||| Sbjct: 505 cccgcgtcgagtcgctcaggcaggagaagctcgccctcgcagaccaggtggatgagctga 564 Query: 473 agaagaagttgaacgagcggcatgaccagagcgccagctgcggcggc 519 | |||| ||||||||||||| |||||||||| |||||||| |||| Sbjct: 565 gggggaagctgaacgagcggcaagaccagagcggcagctgcgacggc 611 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 74 aaatggagagcgactgccagttc 96 ||||||||||||||||||||||| Sbjct: 91 aaatggagagcgactgccagttc 113
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 396 bits (200), Expect = e-107 Identities = 260/280 (92%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 232 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26162076 gcggcggtggcggggagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 26162135 Query: 233 gcacgttccacgcgcggcgcgccaagctggagccccgggagaaggcggagctggcgcgcg 292 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 26162136 cgacgttccacgcgcggcgggccaagctggagccgcgggagaaggcggagctggcgcggg 26162195 Query: 293 agctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtggc 352 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26162196 agctcgggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtggc 26162255 Query: 353 gcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgccctccacg 412 || |||||||| | ||||| |||| ||| | ||| |||||||| |||||||||||||||| Sbjct: 26162256 gctccaagcagatcgagcacgactacgccgcgctccgcgcccagtacgacgccctccacg 26162315 Query: 413 cccgcgtccagtcgctcaagcaggagaagctcaccctcgc 452 |||||||| ||||||||| ||||||||||||| ||||||| Sbjct: 26162316 cccgcgtcgagtcgctcaggcaggagaagctcgccctcgc 26162355 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 |||| ||||||||||||| |||| |||||||||||||| ||||| ||| | |||||||| Sbjct: 30400858 gaagacggagctggcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 30400917 Query: 333 gaac 336 |||| Sbjct: 30400918 gaac 30400921 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 456 gcagctggaagagctgaagaagaagttgaacgagcggcatgaccagagcgccagctgcgg 515 |||| |||| ||||||| | |||| ||||||||||||| |||||||||| |||||||| Sbjct: 26162446 gcaggtggatgagctgagggggaagctgaacgagcggcaagaccagagcggcagctgcga 26162505 Query: 516 cggc 519 |||| Sbjct: 26162506 cggc 26162509 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 74 aaatggagagcgactgccagttc 96 ||||||||||||||||||||||| Sbjct: 26161902 aaatggagagcgactgccagttc 26161924 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaag 195 ||||||||||||||||||||||| Sbjct: 4634516 gcggcggcggcggcgagaggaag 4634538 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 29313098 gcggcggcggcggcgagagga 29313078 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cggcggcggcggcgagagga 193 |||||||||||||||||||| Sbjct: 23129581 cggcggcggcggcgagagga 23129600 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 23117692 gcggcggcggcggcgagagg 23117711 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 agctgagcggcggcggcggc 186 |||||||||||||||||||| Sbjct: 15929017 agctgagcggcggcggcggc 15929036 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gctgagcggcggcggcggcg 187 |||||||||||||||||||| Sbjct: 11163022 gctgagcggcggcggcggcg 11163003 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 7078037 gcggcggcggcggcgagagg 7078018 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 3193879 gcggcggcggcggcgagagg 3193860 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagc 196 |||||||||||||| ||||||||| Sbjct: 1873354 gcggcggcggcggcaagaggaagc 1873377
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 396 bits (200), Expect = e-107 Identities = 260/280 (92%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 232 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58903 gcggcggtggcggggagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 58962 Query: 233 gcacgttccacgcgcggcgcgccaagctggagccccgggagaaggcggagctggcgcgcg 292 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 58963 cgacgttccacgcgcggcgggccaagctggagccgcgggagaaggcggagctggcgcggg 59022 Query: 293 agctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtggc 352 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59023 agctcgggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtggc 59082 Query: 353 gcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgccctccacg 412 || |||||||| | ||||| |||| ||| | ||| |||||||| |||||||||||||||| Sbjct: 59083 gctccaagcagatcgagcacgactacgccgcgctccgcgcccagtacgacgccctccacg 59142 Query: 413 cccgcgtccagtcgctcaagcaggagaagctcaccctcgc 452 |||||||| ||||||||| ||||||||||||| ||||||| Sbjct: 59143 cccgcgtcgagtcgctcaggcaggagaagctcgccctcgc 59182 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 456 gcagctggaagagctgaagaagaagttgaacgagcggcatgaccagagcgccagctgcgg 515 |||| |||| ||||||| | |||| ||||||||||||| |||||||||| |||||||| Sbjct: 59273 gcaggtggatgagctgagggggaagctgaacgagcggcaagaccagagcggcagctgcga 59332 Query: 516 cggc 519 |||| Sbjct: 59333 cggc 59336 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 74 aaatggagagcgactgccagttc 96 ||||||||||||||||||||||| Sbjct: 58729 aaatggagagcgactgccagttc 58751
>ref|XM_473365.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 690 Score = 297 bits (150), Expect = 2e-77 Identities = 231/258 (89%) Strand = Plus / Plus Query: 187 gagaggaagcggcggttcacggaggagcaggtgcggtcgctggagagcacgttccacgcg 246 |||||||||||||||||||||||||||||| | |||||||||||| || |||||||||| Sbjct: 73 gagaggaagcggcggttcacggaggagcagatacggtcgctggagtccatgttccacgcg 132 Query: 247 cggcgcgccaagctggagccccgggagaaggcggagctggcgcgcgagctggggctgcag 306 | | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 133 caccacgccaagctggagccccgcgagaaggcggagctggcgcgcgagctgggcctgcag 192 Query: 307 ccgcgccaggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctg 366 ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 193 ccgcggcaggtggccatctggttccagaacaagcgcgcgcggtggcgctccaagcagctc 252 Query: 367 gagcaggacttcgcggagctgcgcgcccattacgacgccctccacgcccgcgtccagtcg 426 ||||| |||| ||| | || ||| || | ||||||||||||||| |||||||| |||| Sbjct: 253 gagcacgactacgccgcactccgctccaagtacgacgccctccactcccgcgtcgagtcc 312 Query: 427 ctcaagcaggagaagctc 444 |||||||| ||||||||| Sbjct: 313 ctcaagcaagagaagctc 330
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 297 bits (150), Expect = 2e-77 Identities = 231/258 (89%) Strand = Plus / Plus Query: 187 gagaggaagcggcggttcacggaggagcaggtgcggtcgctggagagcacgttccacgcg 246 |||||||||||||||||||||||||||||| | |||||||||||| || |||||||||| Sbjct: 40456 gagaggaagcggcggttcacggaggagcagatacggtcgctggagtccatgttccacgcg 40515 Query: 247 cggcgcgccaagctggagccccgggagaaggcggagctggcgcgcgagctggggctgcag 306 | | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 40516 caccacgccaagctggagccccgcgagaaggcggagctggcgcgcgagctgggcctgcag 40575 Query: 307 ccgcgccaggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctg 366 ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 40576 ccgcggcaggtggccatctggttccagaacaagcgcgcgcggtggcgctccaagcagctc 40635 Query: 367 gagcaggacttcgcggagctgcgcgcccattacgacgccctccacgcccgcgtccagtcg 426 ||||| |||| ||| | || ||| || | ||||||||||||||| |||||||| |||| Sbjct: 40636 gagcacgactacgccgcactccgctccaagtacgacgccctccactcccgcgtcgagtcc 40695 Query: 427 ctcaagcaggagaagctc 444 |||||||| ||||||||| Sbjct: 40696 ctcaagcaagagaagctc 40713
>gb|AY224440.1| Oryza sativa (japonica cultivar-group) isolate 22834 homeodomain leucine zipper protein-like protein mRNA, partial cds Length = 837 Score = 297 bits (150), Expect = 2e-77 Identities = 231/258 (89%) Strand = Plus / Plus Query: 187 gagaggaagcggcggttcacggaggagcaggtgcggtcgctggagagcacgttccacgcg 246 |||||||||||||||||||||||||||||| | |||||||||||| || |||||||||| Sbjct: 220 gagaggaagcggcggttcacggaggagcagatacggtcgctggagtccatgttccacgcg 279 Query: 247 cggcgcgccaagctggagccccgggagaaggcggagctggcgcgcgagctggggctgcag 306 | | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 280 caccacgccaagctggagccccgcgagaaggcggagctggcgcgcgagctgggcctgcag 339 Query: 307 ccgcgccaggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctg 366 ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 340 ccgcggcaggtggccatctggttccagaacaagcgcgcgcggtggcgctccaagcagctc 399 Query: 367 gagcaggacttcgcggagctgcgcgcccattacgacgccctccacgcccgcgtccagtcg 426 ||||| |||| ||| | || ||| || | ||||||||||||||| |||||||| |||| Sbjct: 400 gagcacgactacgccgcactccgctccaagtacgacgccctccactcccgcgtcgagtcc 459 Query: 427 ctcaagcaggagaagctc 444 |||||||| ||||||||| Sbjct: 460 ctcaagcaagagaagctc 477
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 297 bits (150), Expect = 2e-77 Identities = 231/258 (89%) Strand = Plus / Plus Query: 187 gagaggaagcggcggttcacggaggagcaggtgcggtcgctggagagcacgttccacgcg 246 |||||||||||||||||||||||||||||| | |||||||||||| || |||||||||| Sbjct: 27097813 gagaggaagcggcggttcacggaggagcagatacggtcgctggagtccatgttccacgcg 27097872 Query: 247 cggcgcgccaagctggagccccgggagaaggcggagctggcgcgcgagctggggctgcag 306 | | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 27097873 caccacgccaagctggagccccgcgagaaggcggagctggcgcgcgagctgggcctgcag 27097932 Query: 307 ccgcgccaggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctg 366 ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 27097933 ccgcggcaggtggccatctggttccagaacaagcgcgcgcggtggcgctccaagcagctc 27097992 Query: 367 gagcaggacttcgcggagctgcgcgcccattacgacgccctccacgcccgcgtccagtcg 426 ||||| |||| ||| | || ||| || | ||||||||||||||| |||||||| |||| Sbjct: 27097993 gagcacgactacgccgcactccgctccaagtacgacgccctccactcccgcgtcgagtcc 27098052 Query: 427 ctcaagcaggagaagctc 444 |||||||| ||||||||| Sbjct: 27098053 ctcaagcaagagaagctc 27098070 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 19513294 gcggcggcggcggcgagagga 19513314 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 gagcggcggcggcggcgagaggaag 195 ||||||||||||||||| ||||||| Sbjct: 2203008 gagcggcggcggcggcgcgaggaag 2202984 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cggcggcggcggcgagagga 193 |||||||||||||||||||| Sbjct: 34458403 cggcggcggcggcgagagga 34458384 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tctggttccagaacaagcgc 342 |||||||||||||||||||| Sbjct: 31938356 tctggttccagaacaagcgc 31938337 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 21413648 gcggcggcggcggcgagagg 21413667
>dbj|AK109177.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-H12, full insert sequence Length = 908 Score = 262 bits (132), Expect = 1e-66 Identities = 213/240 (88%) Strand = Plus / Plus Query: 205 acggaggagcaggtgcggtcgctggagagcacgttccacgcgcggcgcgccaagctggag 264 |||||||||||| | |||||||||||| || ||||||||||| | ||||||||||||| Sbjct: 1 acggaggagcagatacggtcgctggagtccatgttccacgcgcaccacgccaagctggag 60 Query: 265 ccccgggagaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatc 324 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 61 ccccgcgagaaggcggagctggcgcgcgagctgggcctgcagccgcggcaggtggccatc 120 Query: 325 tggttccagaacaagcgcgcccggtggcgcaccaagcagctggagcaggacttcgcggag 384 |||||||||||||||||||| ||||||||| |||||||||| ||||| |||| ||| | Sbjct: 121 tggttccagaacaagcgcgcgcggtggcgctccaagcagctcgagcacgactacgccgca 180 Query: 385 ctgcgcgcccattacgacgccctccacgcccgcgtccagtcgctcaagcaggagaagctc 444 || ||| || | ||||||||||||||| |||||||| |||| |||||||| ||||||||| Sbjct: 181 ctccgctccaagtacgacgccctccactcccgcgtcgagtccctcaagcaagagaagctc 240
>emb|X64775.1|OSSHRID O.sativa short highly repeated, interspersed DNA Length = 303 Score = 174 bits (88), Expect = 2e-40 Identities = 115/124 (92%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 232 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 gcggcggtggcggggagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 235 Query: 233 gcacgttccacgcgcggcgcgccaagctggagccccgggagaaggcggagctggcgcgcg 292 ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| | Sbjct: 236 cgacgttccacgcgcggcgggccaagctggagccgcgggagaaggcggacgtggcgcggg 295 Query: 293 agct 296 |||| Sbjct: 296 agct 299 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 atggagagcgactgccagttc 96 ||||||||||||||||||||| Sbjct: 1 atggagagcgactgccagttc 21
>ref|NM_196409.1| Oryza sativa (japonica cultivar-group) putative homeotic protein (OSJNBb0044I14.6), mRNA Length = 1056 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 390 gaaggcgcagctggcgcgcgcgctggggctgcagccgcggcaggtggccatctggttcca 449 Query: 333 gaac 336 |||| Sbjct: 450 gaac 453
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 136279 gaaggcgcagctggcgcgcgcgctggggctgcagccgcggcaggtggccatctggttcca 136338 Query: 333 gaac 336 |||| Sbjct: 136339 gaac 136342
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 40263 gaaggcgcagctggcgcgcgcgctggggctgcagccgcggcaggtggccatctggttcca 40204 Query: 333 gaac 336 |||| Sbjct: 40203 gaac 40200
>gb|DQ353856.1| Triticum aestivum homeodomain-leucine zipper transcription factor TaHDZipI-2 mRNA, complete cds Length = 1126 Score = 103 bits (52), Expect = 6e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 281 agctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagc 340 ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 451 agctggcccgcgcgctggggctgcagccgcggcaggtggccatctggttccagaaccgcc 510 Query: 341 gcgcccggtggcgcaccaagcagctggagcaggact 376 ||||||||||| || |||||||||||| |||||| Sbjct: 511 gcgcccggtggaagacaaagcagctggagaaggact 546 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 181 ggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggaga 232 |||||||||| |||||||||| | | | ||||||||||||| ||||||||| Sbjct: 354 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcggacgctggaga 405
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 13290030 gaaggcgcagctggcgcgcgcgctggggctgcagccgcggcaggtggccatctggttcca 13290089 Query: 333 gaac 336 |||| Sbjct: 13290090 gaac 13290093 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 19827731 gcggcggcggcggcgagagga 19827751 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 16236653 gcggcggcggcggcgagagga 16236633 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 187 gagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 |||| |||||||||| | ||| ||||||||||||| |||||||| Sbjct: 11526490 gagaagaagcggcggctggcggcggagcaggtgcgggcgctggag 11526534 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ctgagcggcggcggcggcga 188 |||||||||||||||||||| Sbjct: 21550595 ctgagcggcggcggcggcga 21550576 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 18993497 gcggcggcggcggcgagagg 18993478 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 160 cagcagcagctgagcggcggcggcggcg 187 ||||||||| ||| |||||||||||||| Sbjct: 14896508 cagcagcaggtgaccggcggcggcggcg 14896535
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 13297370 gaaggcgcagctggcgcgcgcgctggggctgcagccgcggcaggtggccatctggttcca 13297429 Query: 333 gaac 336 |||| Sbjct: 13297430 gaac 13297433 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 19839007 gcggcggcggcggcgagagga 19839027 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 16244894 gcggcggcggcggcgagagga 16244874 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 187 gagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 |||| |||||||||| | ||| ||||||||||||| |||||||| Sbjct: 11532930 gagaagaagcggcggctggcggcggagcaggtgcgggcgctggag 11532974 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ctgagcggcggcggcggcga 188 |||||||||||||||||||| Sbjct: 21562258 ctgagcggcggcggcggcga 21562239 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 19004751 gcggcggcggcggcgagagg 19004732 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 160 cagcagcagctgagcggcggcggcggcg 187 ||||||||| ||| |||||||||||||| Sbjct: 14904749 cagcagcaggtgaccggcggcggcggcg 14904776
>gb|AY105265.1| Zea mays PCO062717 mRNA sequence Length = 2229 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 278 cggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaaca 337 |||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||||| Sbjct: 1023 cggagctggcgcgcaagctgggcctgcagcctcgccaggtggccgtctggttccagaacc 1082 Query: 338 agcgcgcccggtggcgcaccaagcagctggagcaggacttcg 379 |||||||||||| ||||||||||| |||| ||||||| Sbjct: 1083 gccgcgcccggtggaagaccaagcagctcgagcgcgacttcg 1124
>ref|XM_482997.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1412 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || |||||||||||||||||||| ||| |||||||||| Sbjct: 704 gaaggcgcggctggcgcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 763 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 764 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 801 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 ||||||||||||| |||| |||||||||| | | | |||||||||||| |||||||| Sbjct: 607 gcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggag 665
>ref|XM_507271.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0092C08.26 mRNA Length = 1916 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || |||||||||||||||||||| ||| |||||||||| Sbjct: 701 gaaggcgcggctggcgcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 760 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 761 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 798 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 ||||||||||||| |||| |||||||||| | | | |||||||||||| |||||||| Sbjct: 604 gcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggag 662
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || |||||||||||||||||||| ||| |||||||||| Sbjct: 23797429 gaaggcgcggctggcgcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 23797370 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 23797369 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 23797332 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 ||||||||||||| |||| |||||||||| | | | |||||||||||| |||||||| Sbjct: 23797526 gcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggag 23797468 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Minus Query: 313 caggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctggagcag 372 ||||| ||| |||||||||||||| |||||||| ||| ||||||||||| ||||| Sbjct: 19880179 caggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagctcgagcac 19880120 Query: 373 gacttcg 379 ||||||| Sbjct: 19880119 gacttcg 19880113 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 5568008 gcggcggcggcggcgagagga 5568028 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 160 cagcagcagctgagcggcggcggcggcg 187 ||||| |||||| ||||||||||||||| Sbjct: 27569114 cagcaacagctgggcggcggcggcggcg 27569141 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 26126181 gcggcggcggcggcgagagg 26126162 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 23991934 gcggcggcggcggcgagagg 23991915 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 23444431 gcggcggcggcggcgagagg 23444450 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 gctgagcggcggcggcggcgagag 191 ||||||||||||||||||| |||| Sbjct: 20871638 gctgagcggcggcggcggcaagag 20871661 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 4327581 gcggcggcggcggcgagagg 4327562 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tctggttccagaacaagcgc 342 |||||||||||||||||||| Sbjct: 2030760 tctggttccagaacaagcgc 2030741 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 1639608 gcggcggcggcggcgagagg 1639589 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 1526485 gcggcggcggcggcgagagg 1526466
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || |||||||||||||||||||| ||| |||||||||| Sbjct: 86629 gaaggcgcggctggcgcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 86570 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 86569 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 86532 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 ||||||||||||| |||| |||||||||| | | | |||||||||||| |||||||| Sbjct: 86726 gcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggag 86668
>dbj|AK106818.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D05, full insert sequence Length = 1927 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || |||||||||||||||||||| ||| |||||||||| Sbjct: 701 gaaggcgcggctggcgcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 760 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 761 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 798 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 ||||||||||||| |||| |||||||||| | | | |||||||||||| |||||||| Sbjct: 604 gcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggag 662
>dbj|AK068244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140I04, full insert sequence Length = 1412 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || |||||||||||||||||||| ||| |||||||||| Sbjct: 704 gaaggcgcggctggcgcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 763 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 764 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 801 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 ||||||||||||| |||| |||||||||| | | | |||||||||||| |||||||| Sbjct: 607 gcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggag 665
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 301 ctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtggcgcaccaag 360 ||||||||||| |||||||||||||||||||||||| |||||| |||||| || ||| Sbjct: 20062 ctgcagccgcggcaggtggccatctggttccagaaccggcgcgcgcggtggaagacgaag 20121 Query: 361 cagctggagcaggact 376 ||||||||| |||||| Sbjct: 20122 cagctggagaaggact 20137
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 292 gagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtgg 351 ||||| || |||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 20370858 gagctcggcctgcagcctcgccaggtcgccatctggttccagaacaagcgcgcgcggtgg 20370917 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || || ||||||||||||||||| ||| |||||||||| Sbjct: 17849192 gaaggcgcggctggcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 17849251 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 17849252 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 17849289 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcgg 201 ||||||||||||||||||| || |||||||| Sbjct: 8120576 gagcggcggcggcggcgagcggcagcggcgg 8120606 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 ||||||||||||| |||| |||||||||| Sbjct: 17849095 gcggcggcggcggggagaagaagcggcgg 17849123 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 agcggcggcggcggcgagag 191 |||||||||||||||||||| Sbjct: 20569311 agcggcggcggcggcgagag 20569330 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgccgcggcgggggacgacg 145 |||||||||||||||||||| Sbjct: 18566089 cgccgcggcgggggacgacg 18566108
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 292 gagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtgg 351 ||||| || |||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 149985 gagctcggcctgcagcctcgccaggtcgccatctggttccagaacaagcgcgcgcggtgg 150044
>gb|AF145730.1|AF145730 Oryza sativa homeodomain leucine zipper protein (Oshox6) mRNA, partial cds Length = 1057 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 292 gagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtgg 351 ||||| || |||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 255 gagctcggcctgcagcctcgccaggtcgccatctggttccagaacaagcgcgcgcggtgg 314
>dbj|AK103160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121C04, full insert sequence Length = 1182 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 292 gagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtgg 351 ||||| || |||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 260 gagctcggcctgcagcctcgccaggtcgccatctggttccagaacaagcgcgcgcggtgg 319
>dbj|AK059755.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C03, full insert sequence Length = 1151 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 292 gagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccggtgg 351 ||||| || |||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 216 gagctcggcctgcagcctcgccaggtcgccatctggttccagaacaagcgcgcgcggtgg 275
>ref|XM_506668.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1595_D08.21 mRNA Length = 1473 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || || ||||||||||||||||| ||| |||||||||| Sbjct: 559 gaaggcgcggctggcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 618 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 619 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 656 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 ||||||||||||| |||| |||||||||| Sbjct: 462 gcggcggcggcggggagaagaagcggcgg 490
>ref|XM_450967.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1463 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || || ||||||||||||||||| ||| |||||||||| Sbjct: 563 gaaggcgcggctggcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 622 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 623 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 660 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 ||||||||||||| |||| |||||||||| Sbjct: 466 gcggcggcggcggggagaagaagcggcgg 494
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || || ||||||||||||||||| ||| |||||||||| Sbjct: 89836 gaaggcgcggctggcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 89895 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 89896 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 89933 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 ||||||||||||| |||| |||||||||| Sbjct: 89739 gcggcggcggcggggagaagaagcggcgg 89767
>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_B06 Length = 106678 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || || ||||||||||||||||| ||| |||||||||| Sbjct: 11 gaaggcgcggctggcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 70 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 71 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 108
>gb|AF145728.1|AF145728 Oryza sativa homeodomain leucine zipper protein (Oshox4) mRNA, complete cds Length = 1423 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || || ||||||||||||||||| ||| |||||||||| Sbjct: 529 gaaggcgcggctggcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 588 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 589 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 626 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 ||||||||||||| |||| |||||||||| Sbjct: 432 gcggcggcggcggggagaagaagcggcgg 460
>dbj|AK099710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077J22, full insert sequence Length = 1463 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || || ||||||||||||||||| ||| |||||||||| Sbjct: 563 gaaggcgcggctggcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 622 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 623 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 660 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 ||||||||||||| |||| |||||||||| Sbjct: 466 gcggcggcggcggggagaagaagcggcgg 494
>dbj|AK105484.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B05, full insert sequence Length = 1473 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 ||||||| |||||||||||| || || ||||||||||||||||| ||| |||||||||| Sbjct: 559 gaaggcgcggctggcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 618 Query: 333 gaacaagcgcgcccggtggcgcaccaagcagctggagc 370 |||| ||||| |||||| ||||||||||| |||| Sbjct: 619 gaaccgccgcgcgcggtggaagaccaagcagctcgagc 656 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 ||||||||||||| |||| |||||||||| Sbjct: 462 gcggcggcggcggggagaagaagcggcgg 490
>ref|NM_187673.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 924 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 286 gcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcc 345 |||||||| || || ||||||||||||||||| ||| |||||||||||||| |||||| Sbjct: 217 gcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcc 276 Query: 346 cggtggcgcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgcc 405 |||||| || |||||||| |||| |||||||| | || ||||||| |||||||| Sbjct: 277 cggtggaagacgaagcagctcgagcgcgacttcgccgccctccgcgcccgccacgacgcc 336 Query: 406 ctccacgcc 414 |||| |||| Sbjct: 337 ctccgcgcc 345
>gb|AY554032.1| Oryza sativa (japonica cultivar-group) clone R10191 Hox13 (hox13) mRNA, partial cds Length = 419 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 286 gcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcc 345 |||||||| || || ||||||||||||||||| ||| |||||||||||||| |||||| Sbjct: 145 gcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcc 204 Query: 346 cggtggcgcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgcc 405 |||||| || |||||||| |||| |||||||| | || ||||||| |||||||| Sbjct: 205 cggtggaagacgaagcagctcgagcgcgacttcgccgccctccgcgcccgccacgacgcc 264 Query: 406 ctccacgcc 414 |||| |||| Sbjct: 265 ctccgcgcc 273
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 286 gcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcc 345 |||||||| || || ||||||||||||||||| ||| |||||||||||||| |||||| Sbjct: 4635398 gcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcc 4635457 Query: 346 cggtggcgcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgcc 405 |||||| || |||||||| |||| |||||||| | || ||||||| |||||||| Sbjct: 4635458 cggtggaagacgaagcagctcgagcgcgacttcgccgccctccgcgcccgccacgacgcc 4635517 Query: 406 ctccacgcc 414 |||| |||| Sbjct: 4635518 ctccgcgcc 4635526 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 289 cgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccgg 348 |||| ||| |||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 3768063 cgcgcgctcgggctgcagccgcgtcaggtggccatctggttccagaaccgccgcgcgagg 3768004 Query: 349 tggcgcaccaagcagctggagcaggact 376 ||| || |||||||||||| |||||| Sbjct: 3768003 tggaagacgaagcagctggagaaggact 3767976 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaag 195 ||||||||||||||||||||||| Sbjct: 11141540 gcggcggcggcggcgagaggaag 11141518 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcg 200 |||||||||||||||| |||||||||||| Sbjct: 30717609 gagcggcggcggcggcaggaggaagcggcg 30717638 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 159 gcagcagcagctgagcggcggcggcggcg 187 ||||||||||| ||| ||||||||||||| Sbjct: 26117887 gcagcagcagccgaggggcggcggcggcg 26117859 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 |||||||||||||||| |||| ||||||| Sbjct: 25907156 gcggcggcggcggcgacaggaggcggcgg 25907128 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 17262038 gcggcggcggcggcgagagga 17262058 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 12708048 gcggcggcggcggcgagagga 12708028 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagag 191 ||||||||||||||||||||| Sbjct: 12321053 gagcggcggcggcggcgagag 12321073 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgaga 190 |||||||||||||||||||| Sbjct: 33428689 gagcggcggcggcggcgaga 33428708 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 32031563 gcggcggcggcggcgagagg 32031582 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 30242686 gcggcggcggcggcgagagg 30242667 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cggcggcggcggcgagagga 193 |||||||||||||||||||| Sbjct: 7455204 cggcggcggcggcgagagga 7455185
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 286 gcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcc 345 |||||||| || || ||||||||||||||||| ||| |||||||||||||| |||||| Sbjct: 4635513 gcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcc 4635572 Query: 346 cggtggcgcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgcc 405 |||||| || |||||||| |||| |||||||| | || ||||||| |||||||| Sbjct: 4635573 cggtggaagacgaagcagctcgagcgcgacttcgccgccctccgcgcccgccacgacgcc 4635632 Query: 406 ctccacgcc 414 |||| |||| Sbjct: 4635633 ctccgcgcc 4635641 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 289 cgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccgg 348 |||| ||| |||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 3768174 cgcgcgctcgggctgcagccgcgtcaggtggccatctggttccagaaccgccgcgcgagg 3768115 Query: 349 tggcgcaccaagcagctggagcaggact 376 ||| || |||||||||||| |||||| Sbjct: 3768114 tggaagacgaagcagctggagaaggact 3768087 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaag 195 ||||||||||||||||||||||| Sbjct: 11138303 gcggcggcggcggcgagaggaag 11138281 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcg 200 |||||||||||||||| |||||||||||| Sbjct: 30809033 gagcggcggcggcggcaggaggaagcggcg 30809062 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 159 gcagcagcagctgagcggcggcggcggcg 187 ||||||||||| ||| ||||||||||||| Sbjct: 26209196 gcagcagcagccgaggggcggcggcggcg 26209168 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 |||||||||||||||| |||| ||||||| Sbjct: 25998465 gcggcggcggcggcgacaggaggcggcgg 25998437 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 17255579 gcggcggcggcggcgagagga 17255599 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 12704811 gcggcggcggcggcgagagga 12704791 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagag 191 ||||||||||||||||||||| Sbjct: 12317816 gagcggcggcggcggcgagag 12317836 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgaga 190 |||||||||||||||||||| Sbjct: 33519199 gagcggcggcggcggcgaga 33519218 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 32122075 gcggcggcggcggcgagagg 32122094 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 30334108 gcggcggcggcggcgagagg 30334089 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cggcggcggcggcgagagga 193 |||||||||||||||||||| Sbjct: 7453039 cggcggcggcggcgagagga 7453020
>dbj|AK105644.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F05, full insert sequence Length = 1573 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 286 gcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcc 345 |||||||| || || ||||||||||||||||| ||| |||||||||||||| |||||| Sbjct: 596 gcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcc 655 Query: 346 cggtggcgcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgcc 405 |||||| || |||||||| |||| |||||||| | || ||||||| |||||||| Sbjct: 656 cggtggaagacgaagcagctcgagcgcgacttcgccgccctccgcgcccgccacgacgcc 715 Query: 406 ctccacgcc 414 |||| |||| Sbjct: 716 ctccgcgcc 724
>dbj|AK101601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051J21, full insert sequence Length = 1534 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 286 gcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcc 345 |||||||| || || ||||||||||||||||| ||| |||||||||||||| |||||| Sbjct: 597 gcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcc 656 Query: 346 cggtggcgcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgcc 405 |||||| || |||||||| |||| |||||||| | || ||||||| |||||||| Sbjct: 657 cggtggaagacgaagcagctcgagcgcgacttcgccgccctccgcgcccgccacgacgcc 716 Query: 406 ctccacgcc 414 |||| |||| Sbjct: 717 ctccgcgcc 725
>dbj|AK101522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046N04, full insert sequence Length = 1577 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 286 gcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcc 345 |||||||| || || ||||||||||||||||| ||| |||||||||||||| |||||| Sbjct: 593 gcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcc 652 Query: 346 cggtggcgcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgcc 405 |||||| || |||||||| |||| |||||||| | || ||||||| |||||||| Sbjct: 653 cggtggaagacgaagcagctcgagcgcgacttcgccgccctccgcgcccgccacgacgcc 712 Query: 406 ctccacgcc 414 |||| |||| Sbjct: 713 ctccgcgcc 721
>dbj|AK060119.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F01, full insert sequence Length = 1214 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 286 gcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcc 345 |||||||| || || ||||||||||||||||| ||| |||||||||||||| |||||| Sbjct: 275 gcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcc 334 Query: 346 cggtggcgcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgcc 405 |||||| || |||||||| |||| |||||||| | || ||||||| |||||||| Sbjct: 335 cggtggaagacgaagcagctcgagcgcgacttcgccgccctccgcgcccgccacgacgcc 394 Query: 406 ctccacgcc 414 |||| |||| Sbjct: 395 ctccgcgcc 403
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 286 gcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcc 345 |||||||| || || ||||||||||||||||| ||| |||||||||||||| |||||| Sbjct: 76353 gcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcc 76412 Query: 346 cggtggcgcaccaagcagctggagcaggacttcgcggagctgcgcgcccattacgacgcc 405 |||||| || |||||||| |||| |||||||| | || ||||||| |||||||| Sbjct: 76413 cggtggaagacgaagcagctcgagcgcgacttcgccgccctccgcgcccgccacgacgcc 76472 Query: 406 ctccacgcc 414 |||| |||| Sbjct: 76473 ctccgcgcc 76481
>ref|XM_470308.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1571 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 289 cgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccgg 348 |||| ||| |||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 484 cgcgcgctcgggctgcagccgcgtcaggtggccatctggttccagaaccgccgcgcgagg 543 Query: 349 tggcgcaccaagcagctggagcaggact 376 ||| || |||||||||||| |||||| Sbjct: 544 tggaagacgaagcagctggagaaggact 571
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 289 cgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccgg 348 |||| ||| |||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 13314 cgcgcgctcgggctgcagccgcgtcaggtggccatctggttccagaaccgccgcgcgagg 13373 Query: 349 tggcgcaccaagcagctggagcaggact 376 ||| || |||||||||||| |||||| Sbjct: 13374 tggaagacgaagcagctggagaaggact 13401
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 289 cgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcgcgcccgg 348 |||| ||| |||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 46687 cgcgcgctcgggctgcagccgcgtcaggtggccatctggttccagaaccgccgcgcgagg 46628 Query: 349 tggcgcaccaagcagctggagcaggact 376 ||| || |||||||||||| |||||| Sbjct: 46627 tggaagacgaagcagctggagaaggact 46600
>gb|BT018458.1| Zea mays clone EL01N0412H10.d mRNA sequence Length = 1209 Score = 69.9 bits (35), Expect = 9e-09 Identities = 73/86 (84%) Strand = Plus / Plus Query: 282 gctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaacaagcg 341 |||||||||||| || | ||||||||||||||||| ||| |||||||||||||| || Sbjct: 522 gctggcgcgcgacctcngcctgcagccgcgccaggtcgccgtctggttccagaaccgccg 581 Query: 342 cgcccggtggcgcaccaagcagctgg 367 |||||| ||| ||||||||||||| Sbjct: 582 cgcccgctggaagaccaagcagctgg 607 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcg 200 ||||||||||||| |||| ||||||||| Sbjct: 416 gcggcggcggcggggagaagaagcggcg 443
>gb|DQ353855.1| Triticum aestivum homeodomain-leucine zipper transcription factor TaHDZipI-1 mRNA, complete cds Length = 963 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 282 gctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttccagaac 336 |||||||||||| || || ||||||||||||||||| ||| |||||||||||||| Sbjct: 249 gctggcgcgcgaccttggcctgcagccgcgccaggtcgccgtctggttccagaac 303
>ref|XM_467603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1363 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 |||| ||||||||||||| |||| |||||||||||||| ||||| ||| | |||||||| Sbjct: 354 gaagacggagctggcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 413 Query: 333 gaac 336 |||| Sbjct: 414 gaac 417
>ref|XM_506952.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0072H09.24 mRNA Length = 1710 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 |||| ||||||||||||| |||| |||||||||||||| ||||| ||| | |||||||| Sbjct: 851 gaagacggagctggcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 910 Query: 333 gaac 336 |||| Sbjct: 911 gaac 914
>gb|AY554029.1| Oryza sativa (japonica cultivar-group) clone R4057 Hox16 (hox16) mRNA, complete cds Length = 1199 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 |||| ||||||||||||| |||| |||||||||||||| ||||| ||| | |||||||| Sbjct: 205 gaagacggagctggcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 264 Query: 333 gaac 336 |||| Sbjct: 265 gaac 268
>gb|AY559045.1| Oryza sativa homeodomain leucine zipper protein 16 (hox16) mRNA, complete cds Length = 1472 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 |||| ||||||||||||| |||| |||||||||||||| ||||| ||| | |||||||| Sbjct: 440 gaagacggagctggcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 499 Query: 333 gaac 336 |||| Sbjct: 500 gaac 503
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 |||| ||||||||||||| |||| |||||||||||||| ||||| ||| | |||||||| Sbjct: 81718 gaagacggagctggcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 81777 Query: 333 gaac 336 |||| Sbjct: 81778 gaac 81781
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 |||| ||||||||||||| |||| |||||||||||||| ||||| ||| | |||||||| Sbjct: 6906 gaagacggagctggcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 6965 Query: 333 gaac 336 |||| Sbjct: 6966 gaac 6969
>dbj|AK119592.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D05, full insert sequence Length = 1710 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 |||| ||||||||||||| |||| |||||||||||||| ||||| ||| | |||||||| Sbjct: 851 gaagacggagctggcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 910 Query: 333 gaac 336 |||| Sbjct: 911 gaac 914
>dbj|AK058364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F09, full insert sequence Length = 1363 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 |||| ||||||||||||| |||| |||||||||||||| ||||| ||| | |||||||| Sbjct: 354 gaagacggagctggcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 413 Query: 333 gaac 336 |||| Sbjct: 414 gaac 417
>gb|AF264731.1|AF264731 Oryza sativa microsatellite 25CAC sequence Length = 1201 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 273 gaaggcggagctggcgcgcgagctggggctgcagccgcgccaggtggccatctggttcca 332 |||| ||||||||||||| |||| ||||||||||||| ||||| ||| | |||||||| Sbjct: 240 gaagacggagctggcgcggaagctatggctgcagccgcggcaggtcgccgtgtggttcca 299 Query: 333 gaac 336 |||| Sbjct: 300 gaac 303
>gb|AF139497.1|AF139497 Prunus armeniaca homeobox leucine zipper protein (HBLZP) mRNA, complete cds Length = 1127 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 292 gagctggggctgcagccgcgccaggtggccatctggttccagaaca 337 ||||| ||||||||||| |||||||| ||||| ||||| ||||||| Sbjct: 257 gagcttgggctgcagcctcgccaggttgccatatggtttcagaaca 302
>ref|XM_493890.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 159 gcagcagcagctgagcggcggcggcggcg 187 ||||||||||| ||||||||||||||||| Sbjct: 15 gcagcagcagcagagcggcggcggcggcg 43
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 159 gcagcagcagctgagcggcggcggcggcg 187 ||||||||||| ||||||||||||||||| Sbjct: 150905 gcagcagcagcagagcggcggcggcggcg 150933
>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0079P23, complete sequence Length = 125090 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcg 197 ||||||||||||||||||||||||| Sbjct: 24716 gcggcggcggcggcgagaggaagcg 24740
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcg 197 ||||||||||||||||||||||||| Sbjct: 25086252 gcggcggcggcggcgagaggaagcg 25086276 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcggt 202 ||||||||||||||||| |||||||||||| Sbjct: 27630221 gagcggcggcggcggcggtcggaagcggcggt 27630252 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 2680657 gcggcggcggcggcgagagg 2680676
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 159 gcagcagcagctgagcggcggcggcggcg 187 ||||||||||| ||||||||||||||||| Sbjct: 917427 gcagcagcagcagagcggcggcggcggcg 917455 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cggcggcgagaggaagcggcgg 201 |||||||||||||||||||||| Sbjct: 10041112 cggcggcgagaggaagcggcgg 10041133 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cggcggcgagaggaagcggcgg 201 |||||||||||||||||||||| Sbjct: 9909541 cggcggcgagaggaagcggcgg 9909562 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cggcggcgagaggaagcggcgg 201 |||||||||||||||||||||| Sbjct: 9888746 cggcggcgagaggaagcggcgg 9888767 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 agcggcggcggcggcgagagga 193 |||||||||||||||||||||| Sbjct: 4263986 agcggcggcggcggcgagagga 4264007 Score = 42.1 bits (21), Expect = 2.0 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 157 cagcagcagcagctgagcggcggcggcggcgag 189 ||||||||||||| | ||||||||||||||||| Sbjct: 24092297 cagcagcagcagcag-gcggcggcggcggcgag 24092328 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 cggcggcggcggcgagaggaagcgg 198 |||||||||||| |||||||||||| Sbjct: 17536585 cggcggcggcggggagaggaagcgg 17536609 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 23834042 gcggcggcggcggcgagagg 23834061 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 agcagctgagcggcggcggcggcg 187 |||||| ||||||||||||||||| Sbjct: 4516844 agcagcggagcggcggcggcggcg 4516821 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cggcggcggcggcgagagga 193 |||||||||||||||||||| Sbjct: 3001283 cggcggcggcggcgagagga 3001302 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 2970484 gcggcggcggcggcgagagg 2970503
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 159 gcagcagcagctgagcggcggcggcggcg 187 ||||||||||| ||||||||||||||||| Sbjct: 7846 gcagcagcagcagagcggcggcggcggcg 7874
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcg 197 ||||||||||||||||||||||||| Sbjct: 25397271 gcggcggcggcggcgagaggaagcg 25397295 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcggt 202 ||||||||||||||||| |||||||||||| Sbjct: 27654209 gagcggcggcggcggcggtcggaagcggcggt 27654240 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 2689688 gcggcggcggcggcgagagg 2689707
>dbj|AB042769.1| Zinnia elegans ZeHB3 mRNA for homeobox-leucine zipper protein, complete cds Length = 1240 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 307 ccgcgccaggtggccatctggttccagaa 335 ||||||||||||||||| ||||||||||| Sbjct: 560 ccgcgccaggtggccatttggttccagaa 588
>ref|XM_525900.1| PREDICTED: Pan troglodytes similar to Homeobox protein engrailed-1 (Hu-En-1) (LOC470519), mRNA Length = 3249 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 3115 atctggttccagaacaagcgcgcc 3138
>gb|AY452738.1| Danio rerio Hoxc13b (hoxc13b) mRNA, complete cds Length = 1136 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 309 gcgccaggtggccatctggttccagaac 336 |||||||||| ||||||||||||||||| Sbjct: 742 gcgccaggtgaccatctggttccagaac 769
>ref|XM_608162.2| PREDICTED: Bos taurus similar to Homeobox protein engrailed-1 (Hu-En-1) (LOC529707), mRNA Length = 966 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 811 atctggttccagaacaagcgcgcc 834
>ref|NM_001426.2| Homo sapiens engrailed homolog 1 (EN1), mRNA Length = 2943 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 2060 atctggttccagaacaagcgcgcc 2083
>ref|XM_849028.1| PREDICTED: Canis familiaris similar to Homeobox protein engrailed-2 (Mo-En-2) (LOC611369), mRNA Length = 1043 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 610 atctggttccagaacaagcgcgcc 633
>emb|AJ243886.1|PAM243886 Periplaneta americana mRNA for putative transcription factor (Pa-en2.b gene) Length = 745 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 449 atctggttccagaacaagcgcgcc 472
>emb|AJ243885.1|PAM243885 Periplaneta americana mRNA for putative transcription factor (Pa-en2.a gene) Length = 1050 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 754 atctggttccagaacaagcgcgcc 777
>emb|AJ243884.1|PAM243884 Periplaneta americana mRNA for putative transcription factor (Pa-en2 gene) Length = 1824 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 1415 atctggttccagaacaagcgcgcc 1438
>emb|AJ243883.1|PAM243883 Periplaneta americana mRNA for putative transcription factor (Pa-en1 gene) Length = 1690 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 985 atctggttccagaacaagcgcgcc 1008
>ref|NM_131546.1| Danio rerio homeo box C13b (hoxc13b), mRNA Length = 1136 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 309 gcgccaggtggccatctggttccagaac 336 |||||||||| ||||||||||||||||| Sbjct: 742 gcgccaggtgaccatctggttccagaac 769
>emb|X59121.1|MGENBHB M.glutinosa engrailed-related gene B (En-B) homeobox (partial) Length = 181 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 113 atctggttccagaacaagcgcgcc 136
>emb|X04727.1|DVENG Drosophila virilis en-gene (engrailed gene) involved in segmentation Length = 4192 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 3806 atctggttccagaacaagcgcgcc 3829
>gb|AF254261.1| Acheta domesticus engrailed mRNA, partial cds Length = 330 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 238 atctggttccagaacaagcgcgcc 261 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 282 gctggcgcgcgagctggggctg 303 |||||||||||||||||||||| Sbjct: 198 gctggcgcgcgagctggggctg 219
>emb|AJ635325.1| Spermatozopsis similis mRNA for putative eyespot globule-associated protein 1 (gap1 gene), strain SAG B 1.85 Length = 2358 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 159 gcagcagcagctgagcggcggcggcggc 186 ||||||||||| |||||||||||||||| Sbjct: 2067 gcagcagcagcagagcggcggcggcggc 2094
>gb|AF275782.1|AF275782 Phyllium bioculatum engrailed (en) gene, partial cds Length = 141 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 279 ggagctggcgcgcgagctggggct 302 |||||||||||||||||||||||| Sbjct: 96 ggagctggcgcgcgagctggggct 119
>gb|AF275755.1|AF275755 Aretaon asperrimus engrailed (en) gene, partial cds Length = 108 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 279 ggagctggcgcgcgagctggggct 302 |||||||||||||||||||||||| Sbjct: 63 ggagctggcgcgcgagctggggct 86
>gb|AC012665.8| Homo sapiens BAC clone RP11-19E11 from 2, complete sequence Length = 126039 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 34874 atctggttccagaacaagcgcgcc 34851
>gb|U69105.1|EMU69105 Elminius modestus engrailed-b paralog (en.b) gene, partial cds Length = 189 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 118 atctggttccagaacaagcgcgcc 141
>gb|U69104.1|EMU69104 Elminius modestus engrailed-a2 paralog (en.a2) gene, partial cds Length = 189 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 118 atctggttccagaacaagcgcgcc 141
>gb|L12699.1|HUMEN1A02 Homo sapiens engrailed protein (EN1) gene, exon 2 and complete cds Length = 1066 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 183 atctggttccagaacaagcgcgcc 206
>emb|X59122.1|LPENHB L.planeri partial engrailed related homeobox gene (En) Length = 181 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 113 atctggttccagaacaagcgcgcc 136
>ref|XM_317437.2| Anopheles gambiae str. PEST ENSANGP00000011782 (ENSANGG00000023793), partial mRNA Length = 177 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 109 atctggttccagaacaagcgcgcc 132
>gb|AF129401.1|AF129401 Petromyzon marinus engrailed-related homeobox protein (enga) gene, exon 2 and partial cds Length = 1275 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 1087 atctggttccagaacaagcgcgcc 1110
>gb|AY650360.2| Macaca fascicularis engrailed 1 mRNA, partial cds Length = 238 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 148 atctggttccagaacaagcgcgcc 171
>gb|AF071262.1|AF071262 Danio rerio homeobox protein (hoxc13b) gene, partial cds Length = 222 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 309 gcgccaggtggccatctggttccagaac 336 |||||||||| ||||||||||||||||| Sbjct: 126 gcgccaggtgaccatctggttccagaac 153
>gb|M29262.1|SCAENG Grasshopper engrailed (G-en) mRNA encoding a developmental protein, partial cds Length = 279 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgcgcc 345 |||||||||||||||||||||||| Sbjct: 238 atctggttccagaacaagcgcgcc 261
>ref|XM_482406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1837 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 313 caggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctggagcag 372 ||||| ||| |||||||||||||| |||||||| ||| ||||||||||| ||||| Sbjct: 870 caggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagctcgagcac 929 Query: 373 gacttcg 379 ||||||| Sbjct: 930 gacttcg 936
>ref|XM_507232.1| PREDICTED Oryza sativa (japonica cultivar-group), P0433E10.14 mRNA Length = 1855 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 313 caggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctggagcag 372 ||||| ||| |||||||||||||| |||||||| ||| ||||||||||| ||||| Sbjct: 869 caggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagctcgagcac 928 Query: 373 gacttcg 379 ||||||| Sbjct: 929 gacttcg 935
>ref|XM_464349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1756 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaag 195 ||||||||||||||||||||||| Sbjct: 99 gcggcggcggcggcgagaggaag 77
>gb|AY022787.1| Oryza sativa microsatellite MRG5112 containing (CGC)X8, genomic sequence Length = 224 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaag 195 ||||||||||||||||||||||| Sbjct: 115 gcggcggcggcggcgagaggaag 93
>ref|XM_455815.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F16324g predicted mRNA Length = 2406 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 458 agctggaagagctgaagaagaagttga 484 ||||||||||| ||||||||||||||| Sbjct: 1184 agctggaagagatgaagaagaagttga 1210
>ref|XM_849600.1| PREDICTED: Canis familiaris similar to PRP38 pre-mRNA processing factor 38 (yeast) domain containing B (LOC613001), mRNA Length = 3112 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 157 cagcagcagcagctgagcggcggcggcggcg 187 ||||||||||||| | ||||||||||||||| Sbjct: 348 cagcagcagcagcagtgcggcggcggcggcg 378
>gb|AY383548.1| Pleurodeles waltl transcription factor HoxD13 mRNA, complete cds Length = 1077 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 309 gcgccaggtggccatctggttccagaacaagcgcg 343 ||||||||| |||||||||||||||||| ||||| Sbjct: 765 gcgccaggtcaccatctggttccagaacaggcgcg 799
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 458 agctggaagagctgaagaagaagttga 484 ||||||||||| ||||||||||||||| Sbjct: 1513440 agctggaagagatgaagaagaagttga 1513414
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaag 195 ||||||||||||||||||||||| Sbjct: 54897 gcggcggcggcggcgagaggaag 54875
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 286 gcgcgcgagctggggctgcagccgcgc 312 ||||||||||||||||||| ||||||| Sbjct: 3558355 gcgcgcgagctggggctgccgccgcgc 3558329 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggagctggcgcgcgagctgg 298 |||||||||||||||||||| Sbjct: 4671685 ggagctggcgcgcgagctgg 4671704
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Minus Query: 313 caggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctggagcag 372 ||||| ||| |||||||||||||| |||||||| ||| ||||||||||| ||||| Sbjct: 48357 caggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagctcgagcac 48298 Query: 373 gacttcg 379 ||||||| Sbjct: 48297 gacttcg 48291
>dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0092O08 Length = 145596 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcgg 201 ||||||||||||||||||| || |||||||| Sbjct: 135681 gagcggcggcggcggcgagcggcagcggcgg 135711
>dbj|AP005687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0019B22 Length = 137457 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcgg 201 ||||||||||||||||||| || |||||||| Sbjct: 44001 gagcggcggcggcggcgagcggcagcggcgg 44031
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1572_F02 Length = 93626 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaag 195 ||||||||||||||||||||||| Sbjct: 6588 gcggcggcggcggcgagaggaag 6610
>gb|AF145729.1|AF145729 Oryza sativa homeodomain leucine zipper protein (Oshox5) mRNA, complete cds Length = 1538 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 313 caggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctggagcag 372 ||||| ||| |||||||||||||| |||||||| ||| ||||||||||| ||||| Sbjct: 586 caggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagctcgagcac 645 Query: 373 gacttcg 379 ||||||| Sbjct: 646 gacttcg 652
>dbj|AK120718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002D22, full insert sequence Length = 1756 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaag 195 ||||||||||||||||||||||| Sbjct: 99 gcggcggcggcggcgagaggaag 77
>dbj|AK110561.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C12, full insert sequence Length = 1269 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 313 caggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctggagcag 372 ||||| ||| |||||||||||||| |||||||| ||| ||||||||||| ||||| Sbjct: 479 caggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagctcgagcac 538 Query: 373 gacttcg 379 ||||||| Sbjct: 539 gacttcg 545
>dbj|AK101569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050G15, full insert sequence Length = 1836 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 313 caggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctggagcag 372 ||||| ||| |||||||||||||| |||||||| ||| ||||||||||| ||||| Sbjct: 869 caggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagctcgagcac 928 Query: 373 gacttcg 379 ||||||| Sbjct: 929 gacttcg 935
>dbj|AK100634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110A12, full insert sequence Length = 1854 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 313 caggtggccatctggttccagaacaagcgcgcccggtggcgcaccaagcagctggagcag 372 ||||| ||| |||||||||||||| |||||||| ||| ||||||||||| ||||| Sbjct: 868 caggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagctcgagcac 927 Query: 373 gacttcg 379 ||||||| Sbjct: 928 gacttcg 934
>ref|XM_469783.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1085 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcg 200 |||||||||||||||| |||||||||||| Sbjct: 49 gagcggcggcggcggcaggaggaagcggcg 78
>ref|XM_469782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1351 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcg 200 |||||||||||||||| |||||||||||| Sbjct: 49 gagcggcggcggcggcaggaggaagcggcg 78
>ref|XM_527854.1| PREDICTED: Pan troglodytes similar to lipoma HMGIC fusion partner-like 3 (LOC472479), mRNA Length = 972 Score = 44.1 bits (22), Expect = 0.49 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 153 ccttcagcagcagcagctg-agcggcggcggcgg 185 |||||||| |||||||||| |||||||||||||| Sbjct: 140 ccttcagctgcagcagctgcagcggcggcggcgg 173
>gb|AC146338.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093C16, complete sequence Length = 206612 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cggcggcgagaggaagcggcgg 201 |||||||||||||||||||||| Sbjct: 140168 cggcggcgagaggaagcggcgg 140189 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cggcggcgagaggaagcggcgg 201 |||||||||||||||||||||| Sbjct: 119373 cggcggcgagaggaagcggcgg 119394
>gb|AC145272.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0002L02, complete sequence Length = 165685 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cggcggcgagaggaagcggcgg 201 |||||||||||||||||||||| Sbjct: 163878 cggcggcgagaggaagcggcgg 163899 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cggcggcgagaggaagcggcgg 201 |||||||||||||||||||||| Sbjct: 32307 cggcggcgagaggaagcggcgg 32328 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cggcggcgagaggaagcggcgg 201 |||||||||||||||||||||| Sbjct: 11512 cggcggcgagaggaagcggcgg 11533
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gagcggcggcggcggcgagaggaagcggcg 200 |||||||||||||||| |||||||||||| Sbjct: 86174 gagcggcggcggcggcaggaggaagcggcg 86145
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 agcggcggcggcggcgagagga 193 |||||||||||||||||||||| Sbjct: 150465 agcggcggcggcggcgagagga 150486
>gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0672D07, complete sequence Length = 136465 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 agcggcggcggcggcgagagga 193 |||||||||||||||||||||| Sbjct: 18593 agcggcggcggcggcgagagga 18614
>gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022B03, complete sequence Length = 151814 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cggcggcgagaggaagcggcgg 201 |||||||||||||||||||||| Sbjct: 26628 cggcggcgagaggaagcggcgg 26649
>ref|XM_424642.1| PREDICTED: Gallus gallus similar to Protocadherin beta 1 precursor (PCDH-beta1) (LOC427044), partial mRNA Length = 1152 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagagg 192 |||||||||||||||||||||| Sbjct: 57 gagcggcggcggcggcgagagg 78
>ref|XM_430410.1| PREDICTED: Gallus gallus LOC426543 (LOC426543), partial mRNA Length = 553 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagagg 192 |||||||||||||||||||||| Sbjct: 212 gagcggcggcggcggcgagagg 233
>ref|XM_423902.1| PREDICTED: Gallus gallus similar to Protocadherin beta 1 precursor (PCDH-beta1) (LOC426239), partial mRNA Length = 1344 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagagg 192 |||||||||||||||||||||| Sbjct: 198 gagcggcggcggcggcgagagg 219
>ref|XM_423471.1| PREDICTED: Gallus gallus similar to Protocadherin beta 12 precursor (PCDH-beta12) (LOC425750), mRNA Length = 2204 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagagg 192 |||||||||||||||||||||| Sbjct: 370 gagcggcggcggcggcgagagg 391
>ref|XM_423014.1| PREDICTED: Gallus gallus similar to Protocadherin beta 15 precursor (PCDH-beta15) (LOC425230), partial mRNA Length = 2013 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagagg 192 |||||||||||||||||||||| Sbjct: 207 gagcggcggcggcggcgagagg 228
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 285 ggcgcgcgagctggggctgcagccgc 310 ||||||||||||||||||| |||||| Sbjct: 1386984 ggcgcgcgagctggggctgaagccgc 1387009
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gagcggcggcggcggcgagaggaagcggcg 200 |||||||||||||||| |||||||||||| Sbjct: 44781 gagcggcggcggcggcaggaggaagcggcg 44752
>gb|AC002432.1| Homo sapiens BAC clone CTA-317G18 from 7, complete sequence Length = 143427 Score = 44.1 bits (22), Expect = 0.49 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 153 ccttcagcagcagcagctg-agcggcggcggcgg 185 |||||||| |||||||||| |||||||||||||| Sbjct: 45300 ccttcagctgcagcagctgcagcggcggcggcgg 45333
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 gagaaggcggagctggcgcgcg 292 |||||||||||||||||||||| Sbjct: 2744065 gagaaggcggagctggcgcgcg 2744044
>gb|AY245371.1| Iris fulva clone LFR3-1 IRRE retrotransposon, partial sequence Length = 8019 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 463 gaagagctgaagaagaagttga 484 |||||||||||||||||||||| Sbjct: 5455 gaagagctgaagaagaagttga 5476
>gb|AY245368.1| Iris brevicaulis clone LBR8-3 IRRE retrotransposon, partial sequence Length = 6223 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 463 gaagagctgaagaagaagttga 484 |||||||||||||||||||||| Sbjct: 2857 gaagagctgaagaagaagttga 2878
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcg 200 |||||||||||||||| |||||||||||| Sbjct: 26310 gagcggcggcggcggcaggaggaagcggcg 26339
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 ggagctggcgcgcgagctggggctgc 304 |||||||||||| ||||||||||||| Sbjct: 280813 ggagctggcgcgggagctggggctgc 280838
>emb|AJ549926.1|OSA549926 Oryza sativa (indica cultivar-group) mRNA for putative topoisomerase VI subunit A (spo11-1 gene) Length = 1146 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcg 200 |||||||||||||||| |||||||||||| Sbjct: 49 gagcggcggcggcggcaggaggaagcggcg 78
>emb|AJ720277.1| Gallus gallus mRNA for hypothetical protein, clone 13p19 Length = 1938 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 gagcggcggcggcggcgagagg 192 |||||||||||||||||||||| Sbjct: 83 gagcggcggcggcggcgagagg 62
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcgg 198 ||||||||||||||||||||| |||| Sbjct: 20144397 gcggcggcggcggcgagaggacgcgg 20144422 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcgg 198 |||||||||||||||||| ||||||| Sbjct: 1923935 gcggcggcggcggcgagacgaagcgg 1923960 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 30331738 gcggcggcggcggcgagagg 30331757 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tgagcggcggcggcggcgag 189 |||||||||||||||||||| Sbjct: 29361249 tgagcggcggcggcggcgag 29361268 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 agctggaagagctgaagaag 477 |||||||||||||||||||| Sbjct: 28419834 agctggaagagctgaagaag 28419853
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaa 194 |||||||||||||||||||||| Sbjct: 6832086 gcggcggcggcggcgagaggaa 6832065 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cggcggcggcggcgagagga 193 |||||||||||||||||||| Sbjct: 5201847 cggcggcggcggcgagagga 5201828 Score = 40.1 bits (20), Expect = 7.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 160 cagcagcagctg-agcggcggcggcggc 186 |||||||||||| ||||||||||||||| Sbjct: 3355572 cagcagcagctgcagcggcggcggcggc 3355599
>gb|AF141942.1|AF141942 Oryza sativa phytochrome C (phyC) gene, complete cds Length = 6755 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagaggaagcggcg 200 |||||||||||||||| |||||||||||| Sbjct: 6091 gagcggcggcggcggcaggaggaagcggcg 6120
>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence Length = 38975 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/33 (93%), Gaps = 2/33 (6%) Strand = Plus / Minus Query: 157 cagcagcagcagctgagcggcggcggcggcgag 189 ||||||||||||| |||||||||||||||||| Sbjct: 16267 cagcagcagcagc--agcggcggcggcggcgag 16237
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaa 194 |||||||||||||||||||||| Sbjct: 114147 gcggcggcggcggcgagaggaa 114126
>dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0007G12 Length = 111819 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcgg 198 ||||||||||||||||||||| |||| Sbjct: 10397 gcggcggcggcggcgagaggacgcgg 10422
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcgg 198 |||||||||||||||||| ||||||| Sbjct: 52715 gcggcggcggcggcgagacgaagcgg 52740
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcgg 198 |||||||||||||||||| ||||||| Sbjct: 124413 gcggcggcggcggcgagacgaagcgg 124438
>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1068H08 Length = 152794 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcgg 198 ||||||||||||||||||||| |||| Sbjct: 132671 gcggcggcggcggcgagaggacgcgg 132696
>dbj|AK065374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003B24, full insert sequence Length = 1884 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaagcgg 198 ||||||||||||||||||||| |||| Sbjct: 55 gcggcggcggcggcgagaggacgcgg 30
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 158 agcagcagcagctgagcggcggcggc 183 |||||||||||||||||| ||||||| Sbjct: 3050 agcagcagcagctgagcgccggcggc 3025
>ref|NM_001030965.1| Gallus gallus 5'-AMP-activated protein kinase gamma-2 non-catalytic subunit transcript variant 2 (PRKAG2), mRNA Length = 1938 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 gagcggcggcggcggcgagagg 192 |||||||||||||||||||||| Sbjct: 83 gagcggcggcggcggcgagagg 62
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 278 cggagctggcgcgcgagctggg 299 |||||||||||||||||||||| Sbjct: 56588 cggagctggcgcgcgagctggg 56567
>gb|AY650377.1| Macaca fascicularis engrailed 2 mRNA, partial cds Length = 561 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tggttccagaacaagcgcgcc 345 ||||||||||||||||||||| Sbjct: 430 tggttccagaacaagcgcgcc 450
>gb|BC086798.1| Mus musculus aminopeptidase puromycin sensitive, mRNA (cDNA clone MGC:102199 IMAGE:6812900), complete cds Length = 3113 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 221 gcggcggcggcggcgagagga 201
>ref|NM_111269.1| Arabidopsis thaliana oxidoreductase AT3G03980 mRNA, complete cds Length = 983 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cggcgagaggaagcggcggtt 203 ||||||||||||||||||||| Sbjct: 90 cggcgagaggaagcggcggtt 70
>ref|XM_511622.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ40342 (LOC454813), mRNA Length = 2010 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 1557 gcggcggcggcggcgagagga 1537
>ref|XM_480521.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1041 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 33 gcggcggcggcggcgagagga 13
>ref|XM_469176.1| Oryza sativa (japonica cultivar-group), mRNA Length = 966 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 |||||||||||||||| |||| ||||||| Sbjct: 67 gcggcggcggcggcgacaggaggcggcgg 39
>ref|XM_467402.1| Oryza sativa (japonica cultivar-group), mRNA Length = 759 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 286 gcggcggcggcggcgagagga 266
>ref|XM_527959.1| PREDICTED: Pan troglodytes similar to engrailed protein (LOC472584), mRNA Length = 1875 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tggttccagaacaagcgcgcc 345 ||||||||||||||||||||| Sbjct: 1744 tggttccagaacaagcgcgcc 1764
>ref|NM_196826.1| Oryza sativa (japonica cultivar-group) putative spliceosomal protein (OSJNBa0018F16.6), mRNA Length = 1363 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 49 gcggcggcggcggcgagagga 29
>ref|NM_196163.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine zipper protein (OSJNBa0095C06.14), mRNA Length = 888 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 187 gagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 |||| |||||||||| | ||| ||||||||||||| |||||||| Sbjct: 160 gagaagaagcggcggctggcggcggagcaggtgcgggcgctggag 204
>ref|XM_469214.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 159 gcagcagcagctgagcggcggcggcggcg 187 ||||||||||| ||| ||||||||||||| Sbjct: 1208 gcagcagcagccgaggggcggcggcggcg 1236
>ref|XM_468725.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 32 gcggcggcggcggcgagagga 52
>ref|NM_186687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3015 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 cggcggcggcggcgagaggaagcgg 198 |||||||||||||| |||||||||| Sbjct: 99 cggcggcggcggcgggaggaagcgg 123
>gb|AY771999.1| Synthetic construct DEBS polyketide synthase gene cluster, complete sequence Length = 31531 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 acgccctccacgcccgcgtcc 421 ||||||||||||||||||||| Sbjct: 246 acgccctccacgcccgcgtcc 226
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 agcaggtgcggtcgctggaga 232 ||||||||||||||||||||| Sbjct: 339168 agcaggtgcggtcgctggaga 339148
>gb|BT016599.1| Zea mays clone Contig432 mRNA sequence Length = 656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 agctgagcggcggcggcggcg 187 ||||||||||||||||||||| Sbjct: 117 agctgagcggcggcggcggcg 97
>gb|AY022803.1| Oryza sativa microsatellite MRG5128 containing (CGC)X8, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 115 gcggcggcggcggcgagagga 95
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 88769 gcggcggcggcggcgagagga 88789
>ref|XM_426840.1| PREDICTED: Gallus gallus similar to homeotic protein distal-less - mouse (LOC429283), partial mRNA Length = 297 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 49 atctggttccagaacaagcgc 69
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 cggagctggcgcgcgagctgg 298 ||||||||||||||||||||| Sbjct: 680784 cggagctggcgcgcgagctgg 680764
>ref|XM_869645.1| PREDICTED: Bos taurus similar to aminopeptidase puromycin sensitive, transcript variant 2 (LOC534122), mRNA Length = 4043 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 118 gcggcggcggcggcgagagga 98
>ref|XM_882772.1| PREDICTED: Bos taurus similar to aminopeptidase puromycin sensitive, transcript variant 3 (LOC534122), mRNA Length = 705 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 107 gcggcggcggcggcgagagga 87
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 42.1 bits (21), Expect = 2.0 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 157 cagcagcagcagctgagcggcggcggcggcgag 189 ||||||||||||| | ||||||||||||||||| Sbjct: 160786 cagcagcagcagcag-gcggcggcggcggcgag 160817
>ref|XM_870849.1| PREDICTED: Bos taurus similar to globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (LOC618517), mRNA Length = 2033 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 gcgagaggaagcggcggttca 205 ||||||||||||||||||||| Sbjct: 1312 gcgagaggaagcggcggttca 1292
>gb|BC012367.1| Homo sapiens mal, T-cell differentiation protein 2, mRNA (cDNA clone MGC:17366 IMAGE:3860009), complete cds Length = 947 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 agctgagcggcggcggcggcg 187 ||||||||||||||||||||| Sbjct: 10 agctgagcggcggcggcggcg 30
>gb|AY640312.1| Gallus gallus truncated homeodomain transciption factor DLX1-delta (DLX1) mRNA, complete cds, alternatively spliced Length = 887 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 561 atctggttccagaacaagcgc 581
>gb|AY640311.1| Gallus gallus DLX4 pseudogene mRNA, complete sequence Length = 849 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 477 atctggttccagaacaagcgc 497
>gb|AY640309.1| Gallus gallus homeodomain transcription factor DLX1 (DLX1) mRNA, complete cds, alternatively spliced Length = 1059 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 658 atctggttccagaacaagcgc 678
>gb|AY640308.1| Gallus gallus homeodomain transcription factor DLX6 (DLX6) mRNA, complete cds Length = 1170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 671 atctggttccagaacaagcgc 691
>gb|BC010576.1| Homo sapiens transcription factor AP-4 (activating enhancer binding protein 4), mRNA (cDNA clone MGC:17100 IMAGE:4181538), complete cds Length = 2038 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 ggaggagcaggtgcggtcgctggag 231 ||||||||||||||| ||||||||| Sbjct: 659 ggaggagcaggtgcgctcgctggag 683
>ref|NM_008942.2| Mus musculus aminopeptidase puromycin sensitive (Npepps), mRNA Length = 4161 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 229 gcggcggcggcggcgagagga 209
>ref|XM_877164.1| PREDICTED: Bos taurus similar to Homeobox protein DLX-1, transcript variant 4 (LOC521806), mRNA Length = 1213 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 965 atctggttccagaacaagcgc 985
>ref|XM_877115.1| PREDICTED: Bos taurus similar to Homeobox protein DLX-1, transcript variant 3 (LOC521806), mRNA Length = 1022 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 768 atctggttccagaacaagcgc 788
>ref|XM_877072.1| PREDICTED: Bos taurus similar to Homeobox protein DLX-1, transcript variant 2 (LOC521806), mRNA Length = 1294 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 968 atctggttccagaacaagcgc 988
>ref|XM_865797.1| PREDICTED: Bos taurus similar to Homeobox protein DLX-1, transcript variant 1 (LOC521806), mRNA Length = 1234 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 908 atctggttccagaacaagcgc 928
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 cggcggcggcggcgagaggaagcgg 198 |||||||||||| |||||||||||| Sbjct: 66390 cggcggcggcggggagaggaagcgg 66414
>gb|BC009653.1| Mus musculus aminopeptidase puromycin sensitive, mRNA (cDNA clone MGC:5986 IMAGE:3487224), complete cds Length = 3041 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 168 gcggcggcggcggcgagagga 148
>ref|NM_003223.1| Homo sapiens transcription factor AP-4 (activating enhancer binding protein 4) (TFAP4), mRNA Length = 2149 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 ggaggagcaggtgcggtcgctggag 231 ||||||||||||||| ||||||||| Sbjct: 774 ggaggagcaggtgcgctcgctggag 798
>ref|XM_978639.1| PREDICTED: Mus musculus hypothetical protein LOC670034 (LOC670034), mRNA Length = 739 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 307 gcggcggcggcggcgagagga 327
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete sequence Length = 140720 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagaggaagcggcgg 201 |||||||||||||||| |||| ||||||| Sbjct: 100764 gcggcggcggcggcgacaggaggcggcgg 100792
>ref|XM_540881.2| PREDICTED: Canis familiaris similar to neurexin 2 isoform alpha-2 precursor, transcript variant 1 (LOC483760), mRNA Length = 5094 Score = 42.1 bits (21), Expect = 2.0 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 157 cagcagcagcagctg-agcggcggcggcggcga 188 ||||||||||||| | ||||||||||||||||| Sbjct: 69 cagcagcagcagcggcagcggcggcggcggcga 37
>ref|XM_848091.1| PREDICTED: Canis familiaris similar to neurexin 2 isoform alpha-2 precursor, transcript variant 2 (LOC483760), mRNA Length = 5301 Score = 42.1 bits (21), Expect = 2.0 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 157 cagcagcagcagctg-agcggcggcggcggcga 188 ||||||||||||| | ||||||||||||||||| Sbjct: 69 cagcagcagcagcggcagcggcggcggcggcga 37
>emb|BX908774.13| Zebrafish DNA sequence from clone CH211-103A8 in linkage group 3, complete sequence Length = 165773 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 189 gaggaagcggcggttcacggaggag 213 ||||||||||||||||| ||||||| Sbjct: 71428 gaggaagcggcggttcagggaggag 71452
>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence, complete sequence Length = 63654 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cggcgagaggaagcggcggtt 203 ||||||||||||||||||||| Sbjct: 28472 cggcgagaggaagcggcggtt 28452
>gb|AC121976.2| Mus musculus BAC clone RP24-286N17 from 8, complete sequence Length = 161146 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 agctgagcggcggcggcggcg 187 ||||||||||||||||||||| Sbjct: 64485 agctgagcggcggcggcggcg 64465
>ref|XM_547149.2| PREDICTED: Canis familiaris similar to transcription factor AP-4 (activating enhancer-binding protein 4) (LOC490029), mRNA Length = 1398 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 ggaggagcaggtgcggtcgctggag 231 ||||||||||||||| ||||||||| Sbjct: 731 ggaggagcaggtgcgctcgctggag 755
>ref|XM_774234.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_587_113559_117434) partial mRNA Length = 3876 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 gcagcagcagctgagcggcgg 179 ||||||||||||||||||||| Sbjct: 1556 gcagcagcagctgagcggcgg 1536
>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete sequence Length = 115326 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 94782 gcggcggcggcggcgagagga 94802
>gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complete sequence Length = 161566 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tggttccagaacaagcgcgcc 345 ||||||||||||||||||||| Sbjct: 93400 tggttccagaacaagcgcgcc 93420
>gb|AY346329.1| Oryza sativa (indica cultivar-group) homeodomain leucine-zipper protein Hox8 mRNA, complete cds Length = 1272 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 187 gagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 |||| |||||||||| | ||| ||||||||||||| |||||||| Sbjct: 352 gagaagaagcggcggctggcggcggagcaggtgcgggcgctggag 396
>emb|AL132868.24|HSA262P20 Human DNA sequence from clone RP11-262P20 on chromosome 4, complete sequence Length = 193444 Score = 42.1 bits (21), Expect = 2.0 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 156 tcagcagcagcagctg-agcggcggcggcggcg 187 |||||||||||||| | |||||||||||||||| Sbjct: 29522 tcagcagcagcagcagcagcggcggcggcggcg 29554
>emb|Y19204.1|ZMA19204 Zea mays chloroplast mRNA for 30S ribosomal protein S17 Length = 643 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 agctgagcggcggcggcggcg 187 ||||||||||||||||||||| Sbjct: 89 agctgagcggcggcggcggcg 69
>emb|X57435.1|HSTFAP H.sapiens mRNA for transcription factor AP-4 Length = 1828 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 ggaggagcaggtgcggtcgctggag 231 ||||||||||||||| ||||||||| Sbjct: 465 ggaggagcaggtgcgctcgctggag 489
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 280 gagctggcgcgcgagctggggctgcagccgcgc 312 ||||||||||||| ||||| | ||||||||||| Sbjct: 325547 gagctggcgcgcgcgctggcgatgcagccgcgc 325579
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 280 gagctggcgcgcgagctggggctgcagccgcgc 312 ||||||||||||| ||||| | ||||||||||| Sbjct: 84934 gagctggcgcgcgcgctggcgatgcagccgcgc 84966
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 280 gagctggcgcgcgagctggggctgcagccgcgc 312 ||||||||||||| ||||| | ||||||||||| Sbjct: 100998 gagctggcgcgcgcgctggcgatgcagccgcgc 101030
>emb|BX294137.1| Pirellula sp. strain 1 complete genome; segment 5/24 Length = 302550 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 gacttcgcggagctgcgcgcc 393 ||||||||||||||||||||| Sbjct: 153642 gacttcgcggagctgcgcgcc 153622
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete sequence Length = 139187 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 159 gcagcagcagctgagcggcggcggcggcg 187 ||||||||||| ||| ||||||||||||| Sbjct: 38663 gcagcagcagccgaggggcggcggcggcg 38691
>gb|DQ094294.1| Iresine viroid 1 isolate IrVd-TV, complete genome Length = 370 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 436 gagaagctcaccctcgccgcgcagc 460 ||||||| ||||||||||||||||| Sbjct: 358 gagaagcccaccctcgccgcgcagc 334
>gb|BC098212.1| Mus musculus aminopeptidase puromycin sensitive, mRNA (cDNA clone MGC:106683 IMAGE:6825181), complete cds Length = 4161 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 229 gcggcggcggcggcgagagga 209
>gb|DQ397859.1| Cenarchaeum symbiosum clone C07D01, complete sequence Length = 43795 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 ccccgggagaaggcggagctg 285 ||||||||||||||||||||| Sbjct: 38683 ccccgggagaaggcggagctg 38703
>gb|DQ397853.1| Cenarchaeum symbiosum clone C16D03, complete sequence Length = 42367 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccccgggagaaggcggagctg 285 ||||||||||||||||||||| Sbjct: 14785 ccccgggagaaggcggagctg 14765
>dbj|AK125334.1| Homo sapiens cDNA FLJ43344 fis, clone NT2RI3008162 Length = 4153 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 ggaagagctgaagaagaagtt 482 ||||||||||||||||||||| Sbjct: 1664 ggaagagctgaagaagaagtt 1684
>emb|CR610803.1| full-length cDNA clone CS0DI027YO14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1707 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 ggaggagcaggtgcggtcgctggag 231 ||||||||||||||| ||||||||| Sbjct: 616 ggaggagcaggtgcgctcgctggag 640
>emb|CR605422.1| full-length cDNA clone CS0DC023YI19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1976 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 ggaggagcaggtgcggtcgctggag 231 ||||||||||||||| ||||||||| Sbjct: 631 ggaggagcaggtgcgctcgctggag 655
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 115542 gcggcggcggcggcgagagga 115522
>gb|AF396687.1| Homo sapiens rab effector MYRIP (MYRIP) mRNA, complete cds Length = 4887 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 ggaagagctgaagaagaagtt 482 ||||||||||||||||||||| Sbjct: 2026 ggaagagctgaagaagaagtt 2046
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 187 gagaggaagcggcggttcacggaggagcaggtgcggtcgctggag 231 |||| |||||||||| | ||| ||||||||||||| |||||||| Sbjct: 110483 gagaagaagcggcggctggcggcggagcaggtgcgggcgctggag 110527
>dbj|AK133898.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730503E07 product:puromycin-sensitive aminopeptidase, full insert sequence Length = 2872 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 37 gcggcggcggcggcgagagga 17
>ref|NM_009569.1| Mus musculus zinc finger protein, multitype 1 (Zfpm1), mRNA Length = 3398 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 agctgagcggcggcggcggcg 187 ||||||||||||||||||||| Sbjct: 58 agctgagcggcggcggcggcg 78
>ref|NM_015460.2| Homo sapiens myosin VIIA and Rab interacting protein (MYRIP), mRNA Length = 4884 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 ggaagagctgaagaagaagtt 482 ||||||||||||||||||||| Sbjct: 2025 ggaagagctgaagaagaagtt 2045
>dbj|AK138772.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430060G23 product:puromycin-sensitive aminopeptidase, full insert sequence Length = 1414 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 208 gcggcggcggcggcgagagga 188
>ref|XM_379250.3| PREDICTED: Homo sapiens hypothetical gene supported by BC038466; BC062790 (LOC401115), mRNA Length = 458 Score = 42.1 bits (21), Expect = 2.0 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 156 tcagcagcagcagctg-agcggcggcggcggcg 187 |||||||||||||| | |||||||||||||||| Sbjct: 202 tcagcagcagcagcagcagcggcggcggcggcg 170
>emb|CR541726.1| Homo sapiens full open reading frame cDNA clone RZPDo834B1029D for gene TFAP4, transcription factor AP-4 (activating enhancer binding protein 4); complete cds, incl. stopcodon Length = 1017 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 ggaggagcaggtgcggtcgctggag 231 ||||||||||||||| ||||||||| Sbjct: 516 ggaggagcaggtgcgctcgctggag 540
>gb|BC092512.1| Homo sapiens myosin VIIA and Rab interacting protein, mRNA (cDNA clone MGC:104940 IMAGE:3093499), complete cds Length = 5045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 ggaagagctgaagaagaagtt 482 ||||||||||||||||||||| Sbjct: 2176 ggaagagctgaagaagaagtt 2196
>gb|S73885.1| AP-4=basic helix-loop-helix DNA-binding protein [human, cervical carcinoma, HeLa cells, mRNA, 2149 nt] Length = 2149 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 ggaggagcaggtgcggtcgctggag 231 ||||||||||||||| ||||||||| Sbjct: 774 ggaggagcaggtgcgctcgctggag 798
>emb|CR386811.1| Gallus gallus finished cDNA, clone ChEST40e2 Length = 939 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 659 atctggttccagaacaagcgc 679
>gb|AF385727.1|AF385727 Arabidopsis thaliana AT3g03980/T11I18_9 mRNA, complete cds Length = 981 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cggcgagaggaagcggcggtt 203 ||||||||||||||||||||| Sbjct: 90 cggcgagaggaagcggcggtt 70
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 49533 gcggcggcggcggcgagagga 49553
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 ggcggcgagaggaagcggcgg 201 ||||||||||||||||||||| Sbjct: 11333264 ggcggcgagaggaagcggcgg 11333244 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 cggcggcggcggcgagaggaagcgg 198 |||||||||||||| |||||||||| Sbjct: 7441611 cggcggcggcggcgggaggaagcgg 7441587 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 caggtggccatctggttccagaac 336 ||||||||| |||||||||||||| Sbjct: 23506568 caggtggccgtctggttccagaac 23506591 Score = 40.1 bits (20), Expect = 7.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 157 cagcagcagcagctgagcggcggcggcggcga 188 ||||||||||||| | |||||||||||||||| Sbjct: 21760796 cagcagcagcagcag-gcggcggcggcggcga 21760826 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 19245435 gcggcggcggcggcgagagg 19245454 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagg 192 |||||||||||||||||||| Sbjct: 5819377 gcggcggcggcggcgagagg 5819396 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 cgccgcggcgggggacgacggcca 149 ||||||||||| |||||||||||| Sbjct: 2904513 cgccgcggcggaggacgacggcca 2904536 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagaggaagc 196 ||||||||||||||| |||||||| Sbjct: 450152 gcggcggcggcggcgggaggaagc 450129
>emb|AL731602.3|OSJN00251 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059H15, complete sequence Length = 149181 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 gagcggcggcggcggcgagaggaag 195 ||||||||||||||||| ||||||| Sbjct: 117636 gagcggcggcggcggcgcgaggaag 117612
>emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 33941 gcggcggcggcggcgagagga 33961
>emb|BX825503.1|CNS0A572 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZE08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 912 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cggcgagaggaagcggcggtt 203 ||||||||||||||||||||| Sbjct: 66 cggcgagaggaagcggcggtt 46
>emb|BX826050.1|CNS0A55J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 972 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cggcgagaggaagcggcggtt 203 ||||||||||||||||||||| Sbjct: 79 cggcgagaggaagcggcggtt 59
>gb|AC093915.2| Homo sapiens BAC clone RP11-785G17 from 2, complete sequence Length = 120416 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 aagcagctggagcaggacttc 378 ||||||||||||||||||||| Sbjct: 60372 aagcagctggagcaggacttc 60352
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 62501 gcggcggcggcggcgagagga 62481
>gb|AC156446.2| Volvox carteri clone JGIAOBO-29H23, complete sequence Length = 31927 Score = 42.1 bits (21), Expect = 2.0 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 156 tcagcagcagcagctg-agcggcggcggcggcg 187 |||||||||||||| | |||||||||||||||| Sbjct: 12187 tcagcagcagcagcagcagcggcggcggcggcg 12219
>emb|BX933515.1| Gallus gallus finished cDNA, clone ChEST43b7 Length = 957 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atctggttccagaacaagcgc 342 ||||||||||||||||||||| Sbjct: 680 atctggttccagaacaagcgc 700
>emb|BX005166.14| Zebrafish DNA sequence from clone CH211-137K18 in linkage group 3, complete sequence Length = 178013 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 189 gaggaagcggcggttcacggaggag 213 ||||||||||||||||| ||||||| Sbjct: 69754 gaggaagcggcggttcagggaggag 69778
>ref|NM_001427.2| Homo sapiens engrailed homolog 2 (EN2), mRNA Length = 4793 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tggttccagaacaagcgcgcc 345 ||||||||||||||||||||| Sbjct: 2539 tggttccagaacaagcgcgcc 2559
>gb|AY190949.1| Drosophila pseudoobscura clone DPSF01_8_J08 (D1424) genomic sequence Length = 42117 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 agttccttcagcagcagcagc 169 ||||||||||||||||||||| Sbjct: 16980 agttccttcagcagcagcagc 17000
>gb|AC087856.6| Homo sapiens chromosome 8, clone RP11-4K16, complete sequence Length = 169060 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 agctgagcggcggcggcggcg 187 ||||||||||||||||||||| Sbjct: 112022 agctgagcggcggcggcggcg 112002
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 gagcggcggcggcggcgagag 191 ||||||||||||||||||||| Sbjct: 90586 gagcggcggcggcggcgagag 90606
>gb|J03066.1|HUMFN2A Homo sapiens homeobox protein En-2 gene, partial cds Length = 349 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tggttccagaacaagcgcgcc 345 ||||||||||||||||||||| Sbjct: 205 tggttccagaacaagcgcgcc 225
>gb|L12701.1|HUMEN2A02 Homo sapiens engrailed protein (EN2) gene, exon 2 and complete cds Length = 2440 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tggttccagaacaagcgcgcc 345 ||||||||||||||||||||| Sbjct: 186 tggttccagaacaagcgcgcc 206
>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0656C04 Length = 143411 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 ggcggcgagaggaagcggcgg 201 ||||||||||||||||||||| Sbjct: 33775 ggcggcgagaggaagcggcgg 33755
>emb|AL954387.17| Zebrafish DNA sequence from clone CH211-288B20 in linkage group 18, complete sequence Length = 125744 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/32 (93%), Gaps = 2/32 (6%) Strand = Plus / Minus Query: 157 cagcagcagcagctgagcggcggcggcggcga 188 ||||||||||||| ||||||||||||||||| Sbjct: 78886 cagcagcagcagc--agcggcggcggcggcga 78857
>gb|AY889160.1| Synthetic construct Homo sapiens clone FLH028155.01X transcription factor AP-4 (TFAP4) mRNA, complete cds Length = 1017 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 ggaggagcaggtgcggtcgctggag 231 ||||||||||||||| ||||||||| Sbjct: 516 ggaggagcaggtgcgctcgctggag 540
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 110443 gcggcggcggcggcgagagga 110423
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gcggcggcggcggcgagagga 193 ||||||||||||||||||||| Sbjct: 23384 gcggcggcggcggcgagagga 23404 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,757,394 Number of Sequences: 3902068 Number of extensions: 5757394 Number of successful extensions: 329160 Number of sequences better than 10.0: 627 Number of HSP's better than 10.0 without gapping: 630 Number of HSP's successfully gapped in prelim test: 43 Number of HSP's that attempted gapping in prelim test: 290392 Number of HSP's gapped (non-prelim): 38983 length of query: 568 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 545 effective length of database: 17,143,297,704 effective search space: 9343097248680 effective search space used: 9343097248680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
