Clone Name | bart20c03 |
---|---|
Clone Library Name | barley_pub |
>PHOP2_XENTR (Q66KD6) Probable phosphatase phospho2 (EC 3.1.3.-)| Length = 238 Score = 77.4 bits (189), Expect = 3e-14 Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 9/174 (5%) Frame = +3 Query: 102 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTLR 272 ++VFDFD TII+ +SD W+V + +L + L + W + V L QG Sbjct: 4 LLVFDFDHTIINDNSDTWIVQCVPGKKLPNGLQNSYEKGKWTEYMGRVFSYLGEQGIREE 63 Query: 273 DVADVLRAAPIDP------HVVAAIRAAYSLGCDLRVLSDANRFFIEAVLDHHGLRGYFS 434 D+ ++ A P P H + + ++ D ++SD+N FI+ +L H + F Sbjct: 64 DMKRIMIAIPYTPGMTDLLHFIGQNKDSF----DCIIISDSNTIFIDWILTHANVHNVFD 119 Query: 435 EINTNPSRVDADGRLRIAPHHDFHAGPHGCGLGTCPPNMCKGQVLDRIRASSAT 596 ++ TNP+ D+ G L + H H TCP N+CK +VL+ A ++ Sbjct: 120 KVFTNPAAFDSVGNLTVQNFHVHHC-------TTCPTNLCKKKVLEEFVAKQSS 166
>PHOP1_HUMAN (Q8TCT1) Phosphoethanolamine/phosphocholine phosphatase (EC| 3.1.3.75) Length = 267 Score = 76.3 bits (186), Expect = 6e-14 Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Frame = +3 Query: 102 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTLR 272 ++ FDFD+TI+D +SD+ +V L + L T +N + V L QG R Sbjct: 28 LLTFDFDETIVDENSDDSIVRAAPGQRLPESLRATYREGFYNEYMQRVFKYLGEQGVRPR 87 Query: 273 DVADVLRAAPIDPHVVAAIRAAYSLGCDLRVL--SDANRFFIEAVLDHHGLRGYFSEINT 446 D++ + A P+ P + ++ G V+ SDAN F +E+ L G F I + Sbjct: 88 DLSAIYEAIPLSPGMSDLLQFVAKQGACFEVILISDANTFGVESSLRAAGHHSLFRRILS 147 Query: 447 NPSRVDADGRLRIAPHHDFHAGPHGCGLGTCPPNMCKGQVL 569 NPS DA G L + P H H C CP NMCK +VL Sbjct: 148 NPSGPDARGLLALRPFH-----THSC--ARCPANMCKHKVL 181
>PHOP1_MOUSE (Q8R2H9) Phosphoethanolamine/phosphocholine phosphatase (EC| 3.1.3.75) Length = 267 Score = 74.7 bits (182), Expect = 2e-13 Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Frame = +3 Query: 102 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTLR 272 ++ FDFD+TI+D +SD+ +V +L + L T +N + V L QG R Sbjct: 28 LLTFDFDETIVDENSDDSIVRAAPGQQLPESLRATYREGYYNEYMQRVFKYLGEQGVRPR 87 Query: 273 DVADVLRAAPIDPHVVAAIRAAYSLGCDLRVL--SDANRFFIEAVLDHHGLRGYFSEINT 446 D+ V P+ P + ++ G V+ SDAN F +E+ L G F I + Sbjct: 88 DLRAVYETIPLSPGMGDLLQFIAKQGSCFEVILISDANTFGVESALRAAGHHSLFRRILS 147 Query: 447 NPSRVDADGRLRIAPHHDFHAGPHGCGLGTCPPNMCKGQVL 569 NPS DA G L + P H H C CP NMCK +VL Sbjct: 148 NPSGPDARGLLTLRPFH-----THSC--SRCPANMCKHKVL 181
>PHOP2_MOUSE (Q9D9M5) Pyridoxal phosphate phosphatase PHOSPHO2 (EC 3.1.3.74)| Length = 241 Score = 68.9 bits (167), Expect = 1e-11 Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 6/163 (3%) Frame = +3 Query: 99 VVVVFDFDKTIIDVDSDNWVV----DGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKT 266 V++VFDFD TIID +SD W+V D EL D + W + V L +G Sbjct: 3 VLLVFDFDNTIIDDNSDTWIVQCAPDKKLPIELQDSYQKGL-WTEFMGRVFKYLRDEGVK 61 Query: 267 LRDVADVLRAAPIDPHVVAAIR--AAYSLGCDLRVLSDANRFFIEAVLDHHGLRGYFSEI 440 ++ + + P ++ + D ++SD+N FI+ VL+ F + Sbjct: 62 ADELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLEAAAFHDVFDHV 121 Query: 441 NTNPSRVDADGRLRIAPHHDFHAGPHGCGLGTCPPNMCKGQVL 569 TNP+ D+ GRL + +H H C CP N+CK VL Sbjct: 122 FTNPASFDSSGRLTVKNYH-----AHSC--TRCPKNLCKNTVL 157
>PHOP1_BRARE (Q6DBV4) Probable phosphatase phospho1 (EC 3.1.3.-)| Length = 279 Score = 67.8 bits (164), Expect = 2e-11 Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 6/162 (3%) Frame = +3 Query: 102 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKT-- 266 ++ FDFD+T++D SD+ +V L L T +N + V+ L QG T Sbjct: 37 LMFFDFDETLVDECSDDSMVSAAPGGVLPGWLKDTYRPGRYNEYMQRVLAYLSEQGVTPA 96 Query: 267 -LRDVADVLRAAPIDPHVVAAIRAAYSLGCDLRVLSDANRFFIEAVLDHHGLRGYFSEIN 443 +R + L P P ++ + + S ++ +SDAN FIE L H G + F I Sbjct: 97 AIRATVEKLPPCPGIPALMHFLLSQPSRDFEVVCVSDANTVFIETWLQHMGFQPLFLRIF 156 Query: 444 TNPSRVDADGRLRIAPHHDFHAGPHGCGLGTCPPNMCKGQVL 569 TNP+ D +G L++ P H H C CP NMCK V+ Sbjct: 157 TNPAHFDDNGVLQLRPFHS-----HEC--LRCPANMCKAVVV 191
>PHOP2_RAT (Q66HC4) Pyridoxal phosphate phosphatase PHOSPHO2 (EC 3.1.3.74)| Length = 241 Score = 65.9 bits (159), Expect = 9e-11 Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 6/163 (3%) Frame = +3 Query: 99 VVVVFDFDKTIIDVDSDNWVV----DGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKT 266 V++VFDFD TIID +SD W++ D EL D + W + V L +G Sbjct: 3 VLLVFDFDNTIIDDNSDTWIIQCAPDKKLPIELQDSYQKGL-WTEFMGRVFKYLRDEGVK 61 Query: 267 LRDVADVLRAAPIDPHVVAAIR--AAYSLGCDLRVLSDANRFFIEAVLDHHGLRGYFSEI 440 ++ + + P ++ + D ++SD+N FI+ VL+ F + Sbjct: 62 EEELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLEAAAFHDVFDTV 121 Query: 441 NTNPSRVDADGRLRIAPHHDFHAGPHGCGLGTCPPNMCKGQVL 569 TNP+ D+ GRL + H H C CP N+CK VL Sbjct: 122 FTNPASFDSTGRLTVRNCH-----THAC--TRCPKNLCKNTVL 157
>PHOP2_HUMAN (Q8TCD6) Pyridoxal phosphate phosphatase PHOSPHO2 (EC 3.1.3.74)| Length = 241 Score = 65.9 bits (159), Expect = 9e-11 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 5/162 (3%) Frame = +3 Query: 99 VVVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTL 269 +++VFDFD TIID +SD W+V +L L + W + V L +G Sbjct: 3 ILLVFDFDNTIIDDNSDTWIVQCAPNKKLPIELRDSYRKGFWTEFMGRVFKYLGDKGVRE 62 Query: 270 RDVADVLRAAPIDPHVVAAIRAAYSLG--CDLRVLSDANRFFIEAVLDHHGLRGYFSEIN 443 ++ + + P P +V D ++SD+N FI+ VL+ F ++ Sbjct: 63 HEMKRAVTSLPFTPGMVELFNFIRKNKDKFDCIIISDSNSVFIDWVLEAASFHDIFDKVF 122 Query: 444 TNPSRVDADGRLRIAPHHDFHAGPHGCGLGTCPPNMCKGQVL 569 TNP+ +++G L + +H H C CP N+CK VL Sbjct: 123 TNPAAFNSNGHLTVENYH-----THSC--NRCPKNLCKKVVL 157
>PHOP1_CHICK (O73884) Phosphoethanolamine/phosphocholine phosphatase (EC| 3.1.3.75) (3X11A) Length = 268 Score = 60.8 bits (146), Expect = 3e-09 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 6/170 (3%) Frame = +3 Query: 102 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTLR 272 ++VFDFD TII+ SD+ +V L + + + +N + V+ + QG + Sbjct: 28 LLVFDFDGTIINESSDDSIVRAAPGQALPEHIRQSFREGFYNEYMQRVLAYMGDQGVKMG 87 Query: 273 DVADVLRAAPIDP---HVVAAIRAAYSLGCDLRVLSDANRFFIEAVLDHHGLRGYFSEIN 443 D V P+ P + + + L ++ ++SDAN F IE L G F +I Sbjct: 88 DFKAVYENIPLSPGMPDLFQFLSKNHEL-FEIILISDANMFGIECKLRAAGFYSLFRKIF 146 Query: 444 TNPSRVDADGRLRIAPHHDFHAGPHGCGLGTCPPNMCKGQVLDRIRASSA 593 +NPS D G + P+H H C CP N CK ++L A A Sbjct: 147 SNPSSFDKRGYFTLGPYHS-----HKC--LDCPANTCKRKILTEYLAERA 189
>GUC2D_HUMAN (Q02846) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)| (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer segment membrane guanylate cyclase) (ROS-GC) Length = 1103 Score = 33.1 bits (74), Expect = 0.62 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = -3 Query: 541 GQVPRPQPCGPAWKSWCGAMRRRPSASTRLGLVLI 437 G +P P CGPAW W ++ R P A RL L+L+ Sbjct: 9 GGLPDPGLCGPAW--WAPSLPRLPRALPRLPLLLL 41
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 32.7 bits (73), Expect = 0.81 Identities = 21/81 (25%), Positives = 34/81 (41%) Frame = -3 Query: 325 AATTCGSMGAARSTSATSRRVLPCACSSPITVSMRVFHGMVGSRRSKSSVAPRPXXXXXX 146 ++++ S ++ S+S++S + S PIT S H S S SS + RP Sbjct: 181 SSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSF 240 Query: 145 XXXXXXXXXXSNTTTTPAIST 83 S T TP+ S+ Sbjct: 241 ITTMSSSTFISTVTVTPSSSS 261
>CG019_HUMAN (Q9H9Y3) Protein C7orf19| Length = 180 Score = 32.0 bits (71), Expect = 1.4 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 15/74 (20%) Frame = -3 Query: 580 RMRSSTWPLHMLGGQVPRPQPCGPAWKSWC-GAMRRRPSASTRL-------------GLV 443 + R WP LG P GPA +SW ++ P+ L G V Sbjct: 12 KARLVPWPRGFLGRGHGEEAPAGPAHQSWARRGSKQHPAVRGSLRPGMRGWQTWESQGRV 71 Query: 442 LISEK-*PRRPWWS 404 L SEK PR PWW+ Sbjct: 72 LRSEKDCPRDPWWT 85
>C6A13_DROME (Q9V4U9) Probable cytochrome P450 6a13 (EC 1.14.-.-) (CYPVIA13)| Length = 493 Score = 32.0 bits (71), Expect = 1.4 Identities = 24/88 (27%), Positives = 34/88 (38%) Frame = +3 Query: 276 VADVLRAAPIDPHVVAAIRAAYSLGCDLRVLSDANRFFIEAVLDHHGLRGYFSEINTNPS 455 VA+ LR PI PH++ Y + +L ++ I HH Y +PS Sbjct: 351 VAETLRKYPILPHLLRRSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDPS 410 Query: 456 RVDADGRLRIAPHHDFHAGPHGCGLGTC 539 R + + I H F P G G C Sbjct: 411 RFEPE---EIKARHPFAYLPFGEGPRNC 435
>GLMM_ZYMMO (Q5NNT4) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 445 Score = 32.0 bits (71), Expect = 1.4 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 6/91 (6%) Frame = +3 Query: 96 GVVVVFDFDKTIIDVDSDNWVVDG-----LGATELFDRLLPTMPWNTLIDTVMGELHAQG 260 G+ + D D+ II VD +VDG L AT R L + NT + TVM L + Sbjct: 237 GIALDGDADRVII-VDEKGEIVDGDQIMALIATSAQKRNL--LKGNTTVATVMSNLGLER 293 Query: 261 KTLRDVADVLRAAPIDPHVVAAIRA-AYSLG 350 + +LR D HVV A+RA Y++G Sbjct: 294 YLSKLGIQLLRTQVGDRHVVEAMRAGGYTVG 324
>NPD1_COREF (Q8FUC8) NAD-dependent deacetylase 1 (EC 3.5.1.-) (Regulatory| protein SIR2 homolog 1) Length = 281 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +3 Query: 381 RFFIEAVLDHHGLRGYFSEINTNPSRVDADGRLRIAPHHDFHAGPHGC 524 R ++A LDH GYF I +PS V+ DG + + HH GC Sbjct: 137 RELLDARLDHLN-PGYFDSIALDPSAVNPDGDVTLDDHHVQRFTMAGC 183
>YHCW_BACSU (P54607) Hypothetical protein yhcW| Length = 220 Score = 31.2 bits (69), Expect = 2.4 Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 19/133 (14%) Frame = +3 Query: 105 VVFDFDKTIIDVDSDNWVVDGLGATELFDR---LLPTMPWNTLIDTVMG-----ELHAQ- 257 ++FDFD I+D ++ + V E+F+ +LP W +I T G L Q Sbjct: 5 LIFDFDGLILDTETHEYEV----LQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQI 60 Query: 258 GKTLRD----------VADVLRAAPIDPHVVAAIRAAYSLGCDLRVLSDANRFFIEAVLD 407 GK L A + + P V A + AA LG + + S ++ ++ L Sbjct: 61 GKKLNHEELTQLRRERFAKRMESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVSGHLK 120 Query: 408 HHGLRGYFSEINT 446 GL F I T Sbjct: 121 QIGLFDDFEVIQT 133
>GPH_SYNP7 (Q55039) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 212 Score = 31.2 bits (69), Expect = 2.4 Identities = 30/132 (22%), Positives = 47/132 (35%), Gaps = 20/132 (15%) Frame = +3 Query: 105 VVFDFDKTIID--------------------VDSDNWVVDGLGATELFDRLLPTMPWNTL 224 ++FDFD T++D +D ++ ++ R PW Sbjct: 4 IIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRRAGLSPWQ-- 61 Query: 225 IDTVMGELHAQGKTLRDVADVLRAAPIDPHVVAAIRAAYSLGCDLRVLSDANRFFIEAVL 404 + + R + D L A + P V + S L +LS +R IEA L Sbjct: 62 ------QARLLQRVQRQLGDCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFL 115 Query: 405 DHHGLRGYFSEI 440 GLR FS + Sbjct: 116 QRQGLRSLFSVV 127
>ITA6_CHICK (P26007) Integrin alpha-6 precursor (VLA-6) [Contains: Integrin| alpha-6 heavy chain; Integrin alpha-6 light chain] Length = 1072 Score = 30.8 bits (68), Expect = 3.1 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +3 Query: 87 EMAGVVVVFDFDKTIIDVDSDNWVVDGLGATELFDR 194 E G+ F +D ++D++SD W +GA + FDR Sbjct: 302 EGEGLASSFGYDVAVVDLNSDGWQDIVVGAPQYFDR 337
>GPH_VIBVY (Q7MH14) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 233 Score = 30.0 bits (66), Expect = 5.3 Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 26/139 (18%) Frame = +3 Query: 102 VVVFDFDKTIID--------VDSDNWVVDGLGATELFDRLLPTMPWNTLIDTVMGELHAQ 257 ++ FD D T++D D V G TEL R D ++G +Q Sbjct: 13 LIAFDLDGTLLDSVPDLAVAADQATRAVGFPGVTELQVRDYV----GNGADILIGRALSQ 68 Query: 258 GKTLR-DVADVLRA-----------------APIDPHVVAAIRAAYSLGCDLRVLSDANR 383 T+ +++D LRA + + P V ++A + G L ++++ Sbjct: 69 SLTINPELSDELRAQARELFDDFYQQTGHKLSHLYPTVKETLKALHQAGFTLALVTNKPS 128 Query: 384 FFIEAVLDHHGLRGYFSEI 440 F+ VL HG+ YF ++ Sbjct: 129 KFVPDVLQQHGIADYFVDV 147
>ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)| [Contains: Integrin alpha-6 heavy chain; Integrin alpha-6 light chain] Length = 1091 Score = 29.6 bits (65), Expect = 6.9 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +3 Query: 96 GVVVVFDFDKTIIDVDSDNWVVDGLGATELFDR 194 G+ F +D ++D+++D W +GA + FDR Sbjct: 311 GLASSFGYDVAVVDLNADGWQDIVIGAPQYFDR 343
>ITA6_HUMAN (P23229) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)| [Contains: Integrin alpha-6 heavy chain; Integrin alpha-6 light chain] Length = 1130 Score = 29.3 bits (64), Expect = 9.0 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +3 Query: 96 GVVVVFDFDKTIIDVDSDNWVVDGLGATELFDR 194 G+ F +D ++D++ D W +GA + FDR Sbjct: 350 GLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDR 382
>TKRA_ECOLI (P37666) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)| (2-ketoaldonate reductase) Length = 324 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = +3 Query: 132 IDVDSDNWVVDGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKTLRDVADVLRA 296 I V DN+ VD L A ++ PT+ T+ DT+M + + + + +VA+ ++A Sbjct: 73 ISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKA 127
>TKRA_ECO57 (P58220) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)| (2-ketoaldonate reductase) Length = 324 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = +3 Query: 132 IDVDSDNWVVDGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKTLRDVADVLRA 296 I V DN+ VD L A ++ PT+ T+ DT+M + + + + +VA+ ++A Sbjct: 73 ISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKA 127 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.124 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,122,649 Number of Sequences: 219361 Number of extensions: 790114 Number of successful extensions: 2237 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2175 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2221 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)