ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart20b12 |
|---|---|
| Clone Library Name | barley_pub |
>GAG_BAEVM (P03341) Gag polyprotein [Contains: Inner coat protein p12; Core| protein p15; Core shell protein p30; Nucleoprotein p10] Length = 536 Score = 33.9 bits (76), Expect = 0.29 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 28/153 (18%) Frame = +3 Query: 117 LLVFVLPSHATATAPTGMLERETKQQILASIP-PHWQENPVL----------------FL 245 LL +P + T P +L E++Q +L P PH NP+L Sbjct: 110 LLALEVPKNRTLDPPKPVLPDESQQDLLFQDPLPHPPHNPLLEPPPYNSPSPPVLSPVSP 169 Query: 246 TSPSGKYAAHFMRSQTVPGAGGLGADFCYVEILDTTEP-----------GAEGRSVWESE 392 T+PS + + S T P + E+ T P G +G S W+S Sbjct: 170 TTPSAPTPSSLVSSSTPPSSPAPP------ELTPRTPPQTPRLRLRRAEGQDGPSTWQSS 223 Query: 393 CLAVSTVNTCALVFSWKGLEVFDGSNSVWHTHD 491 + TVN + + ++++ W TH+ Sbjct: 224 LFPLRTVNRTIQYWPFSASDLYN-----WKTHN 251
>ATN5_YEAST (Q12691) Sodium transport ATPase 5 (EC 3.6.3.7)| Length = 1091 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 372 RSVWESECLAVSTVNTCALVFSWKGLEVFDGSNSVWHTH-DTESVDNNFLKTL 527 R V+ S A +T+ CAL+ +W EV D S + H DT+S F +++ Sbjct: 937 RDVYRSRSAAFATMTWCALILAW---EVVDMRRSFFRMHPDTDSPVKEFFRSI 986
>ATN2_YEAST (Q01896) Sodium transport ATPase 2 (EC 3.6.3.7)| Length = 1091 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 372 RSVWESECLAVSTVNTCALVFSWKGLEVFDGSNSVWHTH-DTESVDNNFLKTL 527 R V+ S A +T+ CAL+ +W EV D S + H DT+S F +++ Sbjct: 937 RDVYRSRSAAFATMTWCALILAW---EVVDMRRSFFRMHPDTDSPVKEFFRSI 986
>ATN1_YEAST (P13587) Sodium transport ATPase 1 (EC 3.6.3.7)| Length = 1091 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 372 RSVWESECLAVSTVNTCALVFSWKGLEVFDGSNSVWHTH-DTESVDNNFLKTL 527 R V+ S A +T+ CAL+ +W EV D S + H DT+S F +++ Sbjct: 937 RDVYRSRSAAFATMTWCALILAW---EVVDMRRSFFRMHPDTDSPVKEFFRSI 986
>PCL_DROME (Q24459) Polycomb protein Pcl (Polycomblike protein)| Length = 1043 Score = 31.2 bits (69), Expect = 1.9 Identities = 21/71 (29%), Positives = 30/71 (42%) Frame = -2 Query: 505 STDSVSCVCHTELLPSNTSSPFHENTSAQVFTVLTAKHSDSHTLRPSAPGSVVSRIST*Q 326 + DS SC S+ SS + T+ V+ DS T P P + +S+ Sbjct: 239 TADSSSCSS------SSVSSSSYSGTATTSAAVVIVDEPDSTTTTPQTPPTTPEAMSSPG 292 Query: 325 KSAPRPPAPGT 293 KS+P PP T Sbjct: 293 KSSPSPPLLAT 303
>YBAY_ECOLI (P77717) Hypothetical lipoprotein ybaY precursor| Length = 190 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = -2 Query: 439 HENTSAQVFTVLTAKHSDSHTLRPSAPGSVVSRIST*QKSAPRPPAPGTVWLRMKCA 269 H + V L A S ++ AP + S +T Q + +P GTVW+R K A Sbjct: 5 HMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKVA 61
>KCNN1_MOUSE (Q9EQR3) Small conductance calcium-activated potassium channel| protein 1 (SK1) Length = 580 Score = 30.4 bits (67), Expect = 3.3 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Frame = +2 Query: 71 NPSSHGARLIHCHV-PLAGVCPPFPRHSDGANRHA*AGNQAANLGEHPAALAGEP 232 +P H L+ H P C P PR + H+ G+ LG P L EP Sbjct: 14 SPQVHSEALLRNHAGPQRACCTPSPRRQVAMSSHSHNGSVGQPLGSGPGFLGWEP 68
>METK_BDEBA (Q6MPK2) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 387 Score = 30.4 bits (67), Expect = 3.3 Identities = 15/68 (22%), Positives = 36/68 (52%) Frame = +3 Query: 63 ETQTPAAMELVSYIAMCLLLVFVLPSHATATAPTGMLERETKQQILASIPPHWQENPVLF 242 + ++ ++ + IA + V + HA + + + + E T++ I SIP +W ++ F Sbjct: 164 DAKSQVTVQYENGIAKRIDAVVISTQHADSVSNSTIQEFITEELIKKSIPGNWIDSKTKF 223 Query: 243 LTSPSGKY 266 +P+G++ Sbjct: 224 FINPTGRF 231
>CCMA2_SALPA (Q5PKT6) Cytochrome c biogenesis ATP-binding export protein ccmA 2| (EC 3.6.3.41) (Heme exporter protein A 2) Length = 205 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = -1 Query: 404 HRQALRLPHAPPLRARLGGVENLDVAEVGSEA----AGARHGLAAHE---VRRVLAGRRR 246 HR L + H P ++ RL ENL G A A A+ GLA E V R+ AG++R Sbjct: 73 HRSLLWIGHQPGIKTRLTARENLHFFHPGDGARLPEALAQAGLAGFEDVPVARLSAGQQR 132 Query: 245 Q 243 + Sbjct: 133 R 133
>CCMA1_SALPA (Q5PI55) Cytochrome c biogenesis ATP-binding export protein ccmA 1| (EC 3.6.3.41) (Heme exporter protein A 1) Length = 205 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = -1 Query: 404 HRQALRLPHAPPLRARLGGVENLDVAEVGSEA----AGARHGLAAHE---VRRVLAGRRR 246 HR L + H P ++ RL ENL G A A A+ GLA E V R+ AG++R Sbjct: 73 HRSLLWIGHQPGIKTRLTARENLHFFHPGDGARLPEALAQAGLAGFEDVPVARLSAGQQR 132 Query: 245 Q 243 + Sbjct: 133 R 133
>TLL_DROME (P18102) Protein tailless| Length = 452 Score = 30.4 bits (67), Expect = 3.3 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -2 Query: 133 RTNTSKRHMAMYETSSMAAGVWVSLPGQM 47 R +T +RHMAMY+ + M AG +P ++ Sbjct: 113 RNSTLRRHMAMYKDAMMGAGEMPQIPAEI 141
>LZTS2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2 (Protein| LAPSER1) Length = 669 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/75 (32%), Positives = 33/75 (44%) Frame = -1 Query: 455 HLQPFPREHERAGVHGAHRQALRLPHAPPLRARLGGVENLDVAEVGSEAAGARHGLAAHE 276 H Q + E+AG A LR P PP A + D A+V AAG L A + Sbjct: 516 HRQEAEQLREKAGQLDAEAAGLREPPVPPATADPFLLAESDEAKVQRAAAGVGGSLRA-Q 574 Query: 275 VRRVLAGRRRQEQHG 231 V R+ +R+ + G Sbjct: 575 VERLRVELQRERRRG 589
>APS_RAT (Q9Z200) SH2 and PH domain-containing adapter protein APS (Adapter| protein with pleckstrin homology and Src homology 2 domains) Length = 621 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 13/54 (24%) Frame = -2 Query: 253 GDVRNNTGFSCQCGGMLAK-----ICCLVSRSSMP--------VGAVAVAWEGR 131 GD +TG SC GG LA C L++ + MP VGAV A GR Sbjct: 301 GDSEEDTGLSCARGGCLASRVTSCSCELLTEADMPRPPETMTAVGAVVTAPHGR 354
>KPBB_DROME (Q9VLS1) Probable phosphorylase b kinase beta regulatory chain| (Phosphorylase kinase beta subunit) Length = 1093 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = -2 Query: 523 VLRKLLSTDSVSCVCHTELLPSNTSSPFHENTSAQVFTVLTAKHSDSHTLR 371 ++ L STDS+ C+C + N P E V T LT + + +LR Sbjct: 710 IINALRSTDSIYCLCQLWGIILNREGPHFEVNGLNVNTALTQLYHRAGSLR 760
>HIS5_SALTY (P0A1R4) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGV--LLPVRRDARQDLLLGFPLKHAGWRR 153 L GRR +E GV L + +D + G PL H GW R Sbjct: 82 LLGRRSEETRGVDLLNIIEQDVPKMTDFGLPLPHMGWNR 120
>HIS5_SALTI (P0A1R5) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGV--LLPVRRDARQDLLLGFPLKHAGWRR 153 L GRR +E GV L + +D + G PL H GW R Sbjct: 82 LLGRRSEETRGVDLLNIIEQDVPKMTDFGLPLPHMGWNR 120
>HIS5_SALPA (Q5PDP6) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGV--LLPVRRDARQDLLLGFPLKHAGWRR 153 L GRR +E GV L + +D + G PL H GW R Sbjct: 82 LLGRRSEETRGVDLLNIIEQDVPKMTDFGLPLPHMGWNR 120
>HIS5_SALCH (Q57MS0) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGV--LLPVRRDARQDLLLGFPLKHAGWRR 153 L GRR +E GV L + +D + G PL H GW R Sbjct: 82 LLGRRSEETRGVDLLNIIEQDVPKMTDFGLPLPHMGWNR 120
>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)| (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42) Length = 1325 Score = 29.6 bits (65), Expect = 5.6 Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Frame = -1 Query: 437 REHERAGVHGAHRQALRLPHAPPLRARLG--GVENLDVAEVGSEAAGARHGLAAHEVR 270 REHERAG+H PH R R G + S AGA H LA H R Sbjct: 1081 REHERAGLH-------ERPHKDHNRGRRGCEPARERERHRPSSPRAGAPHALAPHPDR 1131
>ANPRA_HUMAN (P16066) Atrial natriuretic peptide receptor A precursor (ANP-A)| (ANPRA) (GC-A) (Guanylate cyclase) (EC 4.6.1.2) (NPR-A) (Atrial natriuretic peptide A-type receptor) Length = 1061 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Frame = +3 Query: 198 LASIPPHWQENPVLFL-------TSPSGKYAAHFMRSQTVPGAGGLG 317 LA++ W+ NP +FL +P G++ AH+ GA LG Sbjct: 99 LAAVDLKWEHNPAVFLGPGCVYAAAPVGRFTAHWRVPLLTAGAPALG 145
>GRC3_CRYNE (Q5KI47) Protein GRC3| Length = 744 Score = 29.3 bits (64), Expect = 7.3 Identities = 19/51 (37%), Positives = 28/51 (54%) Frame = +1 Query: 46 ASDQVAKPKPQQPWSSSHTLPCASCWCLSSLPTPQRRRQPACLSGKPSSKS 198 A+ A PKP+QP SS + + +LP+P+RR+ S KP SK+ Sbjct: 9 ATAAAASPKPEQPESSIEEVSVSGA---LTLPSPKRRKTRQ-TSPKPRSKA 55
>MYBPH_MOUSE (P70402) Myosin-binding protein H (MyBP-H) (H-protein)| Length = 483 Score = 29.3 bits (64), Expect = 7.3 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Frame = +1 Query: 10 AHAETPEPTLEVASD----QVAKPKPQQPWSSSHTLPCASCWCLSSLPTPQRRRQPA 168 A T EP+ EVA+ Q P+PQ+P + P AS ++ P P P+ Sbjct: 22 AKVPTTEPSGEVAASESTGQEQAPEPQKPQAQDPAAPAASAMPAATKPEPPSEDVPS 78
>MUC1_HYLLA (Q29435) Mucin-1 precursor (MUC-1)| Length = 475 Score = 29.3 bits (64), Expect = 7.3 Identities = 24/111 (21%), Positives = 43/111 (38%) Frame = +3 Query: 72 TPAAMELVSYIAMCLLLVFVLPSHATATAPTGMLERETKQQILASIPPHWQENPVLFLTS 251 TP L + + +L V S ++ P G E+ET +S+P ++ V +S Sbjct: 2 TPGTQSLFFLLLLLTVLTVVTGSGHASSTPGG--EKETSATQRSSMPSSTEKKVVSMTSS 59 Query: 252 PSGKYAAHFMRSQTVPGAGGLGADFCYVEILDTTEPGAEGRSVWESECLAV 404 ++ PG+G V + TEP + + W + +V Sbjct: 60 VLSSHS---------PGSGSSTTQGQDVSLAPATEPASGSAATWGQDVTSV 101
>ATPA_ACEWO (P50000) ATP synthase alpha chain, sodium ion specific (EC| 3.6.3.15) (Na(+)-translocating ATPase alpha chain) Length = 501 Score = 29.3 bits (64), Expect = 7.3 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = -2 Query: 472 ELLPSNTSSPFHENTSAQVFTVLTAKHSDSHTLRPSAPGSVVSRIST*QKSAPRPPAPGT 293 +L P + +P+ T A+ F K H RPS G + S + ++ R P PG Sbjct: 230 QLAPLHNIAPYSGVTMAEYFMKGPTKRITVHQGRPSKHGCLPSLVFDPRRPPGREPYPGD 289 Query: 292 VW 287 V+ Sbjct: 290 VF 291
>APS_MOUSE (Q9JID9) SH2 and PH domain-containing adapter protein APS (Adapter| protein with pleckstrin homology and Src homology 2 domains) Length = 621 Score = 29.3 bits (64), Expect = 7.3 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 13/54 (24%) Frame = -2 Query: 253 GDVRNNTGFSCQCGGMLAK-----ICCLVSRSSMP--------VGAVAVAWEGR 131 GD +TG SC GG LA C L++ + MP VGAV A GR Sbjct: 301 GDSEEDTGLSCARGGCLASRVASCSCELLTDADMPRPPETTTAVGAVVTAPHGR 354
>POL_MPMV (P07572) Pol polyprotein [Contains: Reverse| transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 867 Score = 28.9 bits (63), Expect = 9.5 Identities = 17/65 (26%), Positives = 33/65 (50%) Frame = +3 Query: 63 ETQTPAAMELVSYIAMCLLLVFVLPSHATATAPTGMLERETKQQILASIPPHWQENPVLF 242 + +T A + V++I L L+F++ + TA PTG+ WQ+NP+++ Sbjct: 316 KVETAIAEQFVTHINYSLPLIFLIFN--TALTPTGLF---------------WQDNPIMW 358 Query: 243 LTSPS 257 + P+ Sbjct: 359 IHLPA 363
>HIS5_SHISS (Q3Z0G2) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 153 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_SHIFL (Q83KJ5) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 153 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_SHIDS (Q32EF2) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 153 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_SHIBS (Q323I9) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 153 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_ECOLI (P60595) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 153 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_ECOL6 (P60596) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 153 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>HIS5_ECO57 (P58237) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 196 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 263 LAGRRRQEQHGVLLP--VRRDARQDLLLGFPLKHAGWRR 153 L GRR +E +GV L + D + G PL H GW R Sbjct: 82 LLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR 120
>CCMA_SALTI (P61377) Cytochrome c biogenesis ATP-binding export protein ccmA| (EC 3.6.3.41) (Heme exporter protein A) Length = 205 Score = 28.9 bits (63), Expect = 9.5 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = -1 Query: 404 HRQALRLPHAPPLRARLGGVENLDVAEVGSEA----AGARHGLAAHE---VRRVLAGRRR 246 HR L + H P ++ RL ENL G A A A+ GLA E V ++ AG++R Sbjct: 73 HRSLLWIGHQPGIKTRLTARENLHFFHPGDGARLPEALAQAGLAGFEDVPVAQLSAGQQR 132 Query: 245 Q 243 + Sbjct: 133 R 133
>CCMA2_SALTY (P61378) Cytochrome c biogenesis ATP-binding export protein ccmA 2| (EC 3.6.3.41) (Heme exporter protein A 2) Length = 205 Score = 28.9 bits (63), Expect = 9.5 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = -1 Query: 404 HRQALRLPHAPPLRARLGGVENLDVAEVGSEA----AGARHGLAAHE---VRRVLAGRRR 246 HR L + H P ++ RL ENL G A A A+ GLA E V ++ AG++R Sbjct: 73 HRSLLWIGHQPGIKTRLTARENLHFFHPGDGARLPEALAQAGLAGFEDVPVAQLSAGQQR 132 Query: 245 Q 243 + Sbjct: 133 R 133
>CCMA1_SALTY (Q8ZKZ9) Cytochrome c biogenesis ATP-binding export protein ccmA 1| (EC 3.6.3.41) (Heme exporter protein A 1) Length = 205 Score = 28.9 bits (63), Expect = 9.5 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = -1 Query: 404 HRQALRLPHAPPLRARLGGVENLDVAEVGSEA----AGARHGLAAHE---VRRVLAGRRR 246 HR L + H P ++ RL ENL G A A A+ GLA E V ++ AG++R Sbjct: 73 HRSLLWIGHQPGIKTRLTARENLHFFHPGDGARLPEALAQAGLAGFEDVPVAQLSAGQQR 132 Query: 245 Q 243 + Sbjct: 133 R 133
>METK_COXBU (Q83A78) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 393 Score = 28.9 bits (63), Expect = 9.5 Identities = 11/42 (26%), Positives = 21/42 (50%) Frame = +3 Query: 141 HATATAPTGMLERETKQQILASIPPHWQENPVLFLTSPSGKY 266 H+ + + E + I +PPHW + FL +P+G++ Sbjct: 191 HSPEISQESLREAVIDEIIKPIMPPHWLDKHTRFLVNPTGRF 232 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,501,367 Number of Sequences: 219361 Number of extensions: 1839801 Number of successful extensions: 6871 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 6351 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6858 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
