ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart20b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, complete sequence Length = 183307 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 238 tcctccggctcccctcccaccgccgcccctgcc 270 |||||| |||||||||||||||| ||||||||| Sbjct: 148143 tcctccagctcccctcccaccgcagcccctgcc 148111
>ref|NM_188414.1| Oryza sativa (japonica cultivar-group), Ozsa8140 predicted mRNA Length = 2007 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctggccg 90 |||||||||||||||||||||||| Sbjct: 35 cgctcctcctcttcctcctggccg 58
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctggccg 90 |||||||||||||||||||||||| Sbjct: 6133273 cgctcctcctcttcctcctggccg 6133296 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 tcgccgcgctcctcctcttcctcct 85 ||||||||||||||||| ||||||| Sbjct: 18964919 tcgccgcgctcctcctcctcctcct 18964895 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctcc 276 |||||||||||||||||||| Sbjct: 37006392 ccgccgcccctgccacctcc 37006373
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctggccg 90 |||||||||||||||||||||||| Sbjct: 157630 cgctcctcctcttcctcctggccg 157653
>dbj|AK066468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066B01, full insert sequence Length = 2023 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctggccg 90 |||||||||||||||||||||||| Sbjct: 72 cgctcctcctcttcctcctggccg 95
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.087 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 cgtcgccgcgctcctcctcttcctcct 85 |||||||||||||||||||||| |||| Sbjct: 5568274 cgtcgccgcgctcctcctcttcgtcct 5568300
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 46.1 bits (23), Expect = 0.087 Identities = 26/27 (96%) Strand = Plus / Minus Query: 59 cgtcgccgcgctcctcctcttcctcct 85 |||||||||||||||||||||| |||| Sbjct: 29862 cgtcgccgcgctcctcctcttcgtcct 29836
>dbj|AK071313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084A11, full insert sequence Length = 871 Score = 46.1 bits (23), Expect = 0.087 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 cgtcgccgcgctcctcctcttcctcct 85 |||||||||||||||||||||| |||| Sbjct: 435 cgtcgccgcgctcctcctcttcgtcct 461
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.087 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 cgtcgccgcgctcctcctcttcctcct 85 |||||||||||||||||||||| |||| Sbjct: 5568263 cgtcgccgcgctcctcctcttcgtcct 5568289
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 46.1 bits (23), Expect = 0.087 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 cgtcgccgcgctcctcctcttcctcct 85 |||||||||||||||||||||| |||| Sbjct: 121079 cgtcgccgcgctcctcctcttcgtcct 121105
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 46.1 bits (23), Expect = 0.087 Identities = 26/27 (96%) Strand = Plus / Minus Query: 59 cgtcgccgcgctcctcctcttcctcct 85 |||||||||||||||||||||| |||| Sbjct: 84611 cgtcgccgcgctcctcctcttcgtcct 84585
>ref|XM_845489.1| PREDICTED: Canis familiaris similar to Ephrin-A5 precursor (EPH-related receptor tyrosine kinase ligand 7) (LERK-7) (AL-1) (LOC608458), mRNA Length = 1002 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 70 tcctcctcttcctcctggccgt 91 |||||||||||||||||||||| Sbjct: 965 tcctcctcttcctcctggccgt 986
>gb|AC151604.2| Emiliania huxleyi clone JGIACCU-13A1, complete sequence Length = 36530 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 gccaccgtcgccgcgctcctcc 75 |||||||||||||||||||||| Sbjct: 5912 gccaccgtcgccgcgctcctcc 5891
>ref|NM_031779.1| Rattus norvegicus amyloid beta (A4) precursor protein-binding, family A, member 1 (Apba1), mRNA Length = 3901 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 61 tcgccgcgctcctcctcttcctcctg 86 ||||||||||||||||| |||||||| Sbjct: 782 tcgccgcgctcctcctcctcctcctg 757
>gb|AF029105.1|AF029105 Rattus norvegicus Mint1 mRNA, complete cds Length = 3901 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 61 tcgccgcgctcctcctcttcctcctg 86 ||||||||||||||||| |||||||| Sbjct: 782 tcgccgcgctcctcctcctcctcctg 757
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 54 gccaccgtcgccgcgctcctcctcttcctc 83 ||||||||||||||||||| |||| ||||| Sbjct: 684641 gccaccgtcgccgcgctccacctcgtcctc 684670 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 gtggacgagggcgtcctccggctc 248 |||||||||||| ||||||||||| Sbjct: 2286463 gtggacgagggcatcctccggctc 2286440
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 gccgtcgccgtggacgagggcg 237 |||||||||||||||||||||| Sbjct: 74858 gccgtcgccgtggacgagggcg 74837
>dbj|AB070226.1| Oryza sativa OsIRT1 mRNA for iron regulated metal transporter, complete cds Length = 1395 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 ccgtcgccgcgctcctcctcttcctc 83 |||||||||||||||||||| ||||| Sbjct: 67 ccgtcgccgcgctcctcctcctcctc 92
>ref|XM_518377.1| PREDICTED: Pan troglodytes similar to advanced glycosylation end product-specific receptor isoform 1 precursor (LOC462584), mRNA Length = 1188 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1127 cgctcctcctcttcctcctgg 1107
>ref|NM_001034312.1| Bos taurus similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1) (MGC128204), mRNA Length = 2766 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cgcgctcctcctcttcctcct 85 ||||||||||||||||||||| Sbjct: 172 cgcgctcctcctcttcctcct 152
>ref|NM_193158.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 tcgccgcgctcctcctcttcctcct 85 ||||||||||||||||| ||||||| Sbjct: 106 tcgccgcgctcctcctcctcctcct 130
>gb|U89336.1|HSMHC3W5A Homo sapiens HLA class III region containing NOTCH4 gene, partial sequence, homeobox PBX2 (HPBX) gene, receptor for advanced glycosylation end products (RAGE) gene, complete cds, and 6 unidentified cds, complete sequence Length = 62944 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 22041 cgctcctcctcttcctcctgg 22021
>gb|AY755627.1| Homo sapiens receptor for advanced glycosylation end-products deletion exon3-10 variant (AGER) mRNA, complete cds, alternatively spliced Length = 493 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 411 cgctcctcctcttcctcctgg 391
>gb|AY755626.1| Homo sapiens receptor for advanced glycosylation end-products deletion exon2-6 variant (AGER) mRNA, complete cds, alternatively spliced Length = 578 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 496 cgctcctcctcttcctcctgg 476
>gb|AY755625.1| Homo sapiens receptor for advanced glycosylation end-products deletion exon3-7 variant (AGER) mRNA, complete cds, alternatively spliced Length = 864 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 782 cgctcctcctcttcctcctgg 762
>gb|AY755624.1| Homo sapiens receptor for advanced glycosylation end-products deletion exon 3 variant (AGER) mRNA, complete cds, alternatively spliced Length = 1204 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1122 cgctcctcctcttcctcctgg 1102
>gb|AY755623.1| Homo sapiens receptor for advanced glycosylation end-products deletion exon 8 and intron 9 variant (AGER) mRNA, complete cds, alternatively spliced Length = 1149 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1067 cgctcctcctcttcctcctgg 1047
>gb|AY755622.1| Homo sapiens receptor for advanced glycosylation end-products intron 4&9 variant (AGER) mRNA, complete cds, alternatively spliced Length = 1249 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1167 cgctcctcctcttcctcctgg 1147
>gb|AY755621.1| Homo sapiens receptor for advanced glycosylation end-products intron 4 variant (AGER) mRNA, complete cds, alternatively spliced Length = 1294 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1212 cgctcctcctcttcctcctgg 1192
>gb|AY755620.1| Homo sapiens receptor for advanced glycosylation end-products intron 9 variant (AGER) mRNA, complete cds, alternatively spliced Length = 1201 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1119 cgctcctcctcttcctcctgg 1099
>gb|AY755619.1| Homo sapiens receptor for advanced glycosylation end-products (AGER) mRNA, complete cds, alternatively spliced Length = 1246 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1164 cgctcctcctcttcctcctgg 1144
>ref|XM_873261.1| PREDICTED: Bos taurus hypothetical protein LOC613553 (LOC613553), mRNA Length = 597 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cgcgctcctcctcttcctcct 85 ||||||||||||||||||||| Sbjct: 202 cgcgctcctcctcttcctcct 182
>ref|XM_591677.2| PREDICTED: Bos taurus similar to intramembrane protease 5 (LOC513917), mRNA Length = 2073 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ctcctcctcttcctcctggcc 89 ||||||||||||||||||||| Sbjct: 31 ctcctcctcttcctcctggcc 51
>ref|NM_001136.3| Homo sapiens advanced glycosylation end product-specific receptor (AGER), transcript variant 1, mRNA Length = 1414 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1178 cgctcctcctcttcctcctgg 1158
>ref|NM_172197.1| Homo sapiens advanced glycosylation end product-specific receptor (AGER), transcript variant 2, mRNA Length = 1259 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1023 cgctcctcctcttcctcctgg 1003
>gb|AY356068.1| Canis familiaris isolate cOR56A24 olfactory receptor family 56 subfamily A-like gene, partial sequence Length = 670 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 cctcctcttcctcctggccgt 91 ||||||||||||||||||||| Sbjct: 610 cctcctcttcctcctggccgt 590
>gb|AC123818.4| Mus musculus BAC clone RP24-266A12 from chromosome 18, complete sequence Length = 169506 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gctcctcctcttcctcctggc 88 ||||||||||||||||||||| Sbjct: 133327 gctcctcctcttcctcctggc 133347
>gb|AF537303.1| Homo sapiens advanced glycosylation end product-specific receptor RAGE3 (AGER) mRNA, partial cds, alternatively spliced Length = 698 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 696 cgctcctcctcttcctcctgg 676
>gb|AF536237.1| Homo sapiens advanced glycosylation end product-specific receptor variant sRAGE2 (AGER) mRNA, partial cds, alternatively spliced Length = 511 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 509 cgctcctcctcttcctcctgg 489
>gb|AF536236.1| Homo sapiens advanced glycosylation end product-specific receptor variant sRAGE1 (AGER) mRNA, partial cds, alternatively spliced Length = 653 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 651 cgctcctcctcttcctcctgg 631
>gb|BC071955.1| Homo sapiens cDNA clone IMAGE:6574557, **** WARNING: chimeric clone **** Length = 2382 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 93 cgctcctcctcttcctcctgg 73
>emb|BX284686.9| Human DNA sequence from clone DASS-39F23 on chromosome 6, complete sequence Length = 80063 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 50722 cgctcctcctcttcctcctgg 50742
>emb|AL845464.5| Human DNA sequence from clone DAQB-143M3 on chromosome 6 Contains the C6orf31 gene for chromosome 6 open reading frame 31, the PPT2 gene for palmitoyl-protein thioesterase 2, the EGFL8 gene for EGF-like-domain, multiple 8, the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha), the RNF5 gene for ring finger protein 5, the AGER gene for advanced glycosylation end product-specific receptor, the PBX2 gene for pre-B-cell leukemia transcription factor 2, the GPSM3 gene (previously C6orf9) for G-protein signalling modulator 3 (AGS3-like, C. elegans), the 3' end of the Notch4 gene for the Notch homolog 4 (Drosophila) and five CpG islands, complete sequence Length = 56747 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 40962 cgctcctcctcttcctcctgg 40982
>emb|AL662830.14| Human DNA sequence from clone XXbac-173E2 on chromosome 6 contains the RNF 5 gene for ring finger protein 5, the AGER gene for advanced glycosylation end product-specific receptor, the PBX2 gene for pre-B-cell leukemia transcription factor 2, the gene for chromosome 6 open reading frame 9, the NOTCH4 gene for Notch homolog 4 (Drosophila) and one CpG island, complete sequence Length = 103327 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 4845 cgctcctcctcttcctcctgg 4865
>emb|AL662884.11| Human DNA sequence from clone XXbac-300A18 on chromosome 6 contains the 5' end of the TNXB gene for tenascin XB (TNXB, XB, TNX, XBS, HXBL, TENX, TNXB1, TNXB2, TNXBS), the CREBL1 gene for cAMP responsive element binding protein-like 1 (CREBL1, G13, CREB-RP), the FKBPL gene for FK506 binding protein like (FKBPL, NG7, DIR1), the gene for chromosome 6 open reading frame 31 (C6orf31, NG5), a putative novel transcript, the PPT2 gene for palmitoyl-protein thioesterase 2 (PPT2, G14), the gene for chromosome 6 open reading frame 8 (C6orf8, NG3), the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) (AGPAT1,G15, LPAATA, MGC5423, LPAAT-alpha), the RNF5 gene for ring finger protein 5 (RNF5, G16, NG2, RING5), the AGER gene for advanced glycosylation end product-specific receptor (AGER, RAGE), the PBX2 gene for pre-B-cell leukemia transcription factor 2 (PBX2, G17, HOX12, PBX2MHC), the C6orf9 gene for chromosome 6 open reading frame 9 (C6orf9, G18, NG1), the NOTCH4 gene for Notch homolog 4 (Drosophila) (NOTCH4, INT3, NOTCH3) and seven CpG islands, complete sequence Length = 137935 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 94031 cgctcctcctcttcctcctgg 94051
>emb|X97667.1|GGCNKX23 G.gallus mRNA for cNKx-2.3 protein Length = 1517 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 ctcctcctcttcctcctggccgtcg 93 ||||||||||||||||| ||||||| Sbjct: 353 ctcctcctcttcctcctcgccgtcg 329
>emb|CR933878.7| Human DNA sequence from clone DAMC-108L3 on chromosome 6, complete sequence Length = 102907 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 51103 cgctcctcctcttcctcctgg 51123
>emb|AL672260.25| Mouse DNA sequence from clone DN-127L1 on chromosome 3 Contains a Saccharomyces cerevisiae Nip7p homolog (pEachy) homolog pseudogene, a tumor protein translationally-controlled 1 (Tpt1) pseudogene, a high mobility group box 2 (Hmgb2) pseudogene and the Cd2 gene for CD2 antigen, complete sequence Length = 169010 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcctcctcttcctcctggcc 89 ||||||||||||||||||||| Sbjct: 31312 ctcctcctcttcctcctggcc 31292
>emb|BX648378.1|HSM808526 Homo sapiens genomic DNA; cDNA DKFZp686C13224 (from clone DKFZp686C13224) Length = 5062 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1437 cgctcctcctcttcctcctgg 1457
>emb|CR812478.6| Human DNA sequence from clone DAAP-218M18 on chromosome 6, complete sequence Length = 75620 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 48276 cgctcctcctcttcctcctgg 48296
>dbj|AK061861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G11, full insert sequence Length = 1612 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 tcgccgcgctcctcctcttcctcct 85 ||||||||||||||||| ||||||| Sbjct: 197 tcgccgcgctcctcctcctcctcct 221
>gb|BC103000.1| Bos taurus similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1), mRNA (cDNA clone MGC:128204 IMAGE:7987452), complete cds Length = 2766 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cgcgctcctcctcttcctcct 85 ||||||||||||||||||||| Sbjct: 172 cgcgctcctcctcttcctcct 152
>emb|BX927239.5| Human DNA sequence from clone DAMA-358M23 on chromosome 6, complete sequence Length = 102588 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 40938 cgctcctcctcttcctcctgg 40958
>gb|AC148714.1| Macaca mulatta Major Histocompatibility Complex BAC MMU457P02, complete sequence Length = 159822 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 10160 cgctcctcctcttcctcctgg 10180
>gb|AC148664.1| Macaca mulatta Major Histocompatibility Complex BAC MMU021E24, complete sequence Length = 189424 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 186780 cgctcctcctcttcctcctgg 186800
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcctcctcttcctcctggccg 90 ||||||||||||||||||||| Sbjct: 32342588 tcctcctcttcctcctggccg 32342608 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cctcctcttcctcctggccgtcgc 94 ||||||||||||||| |||||||| Sbjct: 31695056 cctcctcttcctcctcgccgtcgc 31695079 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ccacctccaccgtcacctct 288 |||||||||||||||||||| Sbjct: 16353272 ccacctccaccgtcacctct 16353253
>ref|NM_205031.1| Gallus gallus NK2 transcription factor related, locus 3 (NKX2-3), mRNA Length = 1517 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 ctcctcctcttcctcctggccgtcg 93 ||||||||||||||||| ||||||| Sbjct: 353 ctcctcctcttcctcctcgccgtcg 329
>dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1074C08 Length = 165701 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 tcgccgcgctcctcctcttcctcct 85 ||||||||||||||||| ||||||| Sbjct: 137309 tcgccgcgctcctcctcctcctcct 137285
>dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129H01 Length = 101104 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 tcgccgcgctcctcctcttcctcct 85 ||||||||||||||||| ||||||| Sbjct: 21962 tcgccgcgctcctcctcctcctcct 21938
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ccggcccgggcgaggtccgcg 354 ||||||||||||||||||||| Sbjct: 5828977 ccggcccgggcgaggtccgcg 5828997
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcctcctcttcctcctggccg 90 ||||||||||||||||||||| Sbjct: 118420 tcctcctcttcctcctggccg 118440
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcctcctcttcctcctggccg 90 ||||||||||||||||||||| Sbjct: 4101 tcctcctcttcctcctggccg 4121
>dbj|AK099005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109B04, full insert sequence Length = 1570 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 tcgccgcgctcctcctcttcctcct 85 ||||||||||||||||| ||||||| Sbjct: 157 tcgccgcgctcctcctcctcctcct 181
>emb|AJ133822.1|HSA133822 Homo sapiens mRNA for receptor for Advanced Glycation End Product, secreted isoform (RAGEsec gene) Length = 1250 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1014 cgctcctcctcttcctcctgg 994
>emb|AJ238896.1|HSA238896 Homo sapiens partial RAGE gene, exons 9 to 11 Length = 747 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 435 cgctcctcctcttcctcctgg 415
>gb|BC020669.1| Homo sapiens advanced glycosylation end product-specific receptor, transcript variant 1, mRNA (cDNA clone MGC:22357 IMAGE:4718076), complete cds Length = 1436 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1173 cgctcctcctcttcctcctgg 1153
>dbj|AB061669.1| Homo sapiens RAGE mRNA for N-terminal truncated form of receptor for advanced glycation endproducts, complete cds Length = 1451 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1361 cgctcctcctcttcctcctgg 1341
>dbj|AB061668.1| Homo sapiens RAGE mRNA for soluble form of receptor for advanced glycation endproducts, complete cds Length = 1223 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1133 cgctcctcctcttcctcctgg 1113
>gb|U36790.1|OCU36790 Oryctolagus cuniculus putative chloride channel mRNA, complete cds Length = 2344 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cccaccgccgcccctgccacc 273 ||||||||||||||||||||| Sbjct: 674 cccaccgccgcccctgccacc 654
>gb|U36789.1|OCU36789 Oryctolagus cuniculus putative chloride channel mRNA, complete cds Length = 2553 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cccaccgccgcccctgccacc 273 ||||||||||||||||||||| Sbjct: 721 cccaccgccgcccctgccacc 701
>emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chromosome 3, complete sequence Length = 227993 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcctcctcttcctcctggcc 89 ||||||||||||||||||||| Sbjct: 121015 ctcctcctcttcctcctggcc 120995
>gb|M91211.1|HUMRAGE Human receptor for advanced glycosylation end products (RAGE) mRNA, partial cds Length = 1391 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1154 cgctcctcctcttcctcctgg 1134
>dbj|D28769.1|HUMHOXRAGE Human HOX12 and RAGE genes, complete cds Length = 10108 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 9684 cgctcctcctcttcctcctgg 9664
>dbj|AB036432.1| Homo sapiens RAGE mRNA for advanced glycation endproducts receptor, complete cds Length = 1268 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctgg 87 ||||||||||||||||||||| Sbjct: 1178 cgctcctcctcttcctcctgg 1158
>ref|NM_000164.2| Homo sapiens gastric inhibitory polypeptide receptor (GIPR), mRNA Length = 2024 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1401 ctccggcccgggcgaggtcc 1420
>gb|BC101673.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA clone MGC:126722 IMAGE:8069179), complete cds Length = 1540 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1388 ctccggcccgggcgaggtcc 1407
>gb|AC129897.2| Ciona savignyi, clone XX-699457L15, complete sequence Length = 38707 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gctcctcctcttcctcctgg 87 |||||||||||||||||||| Sbjct: 15109 gctcctcctcttcctcctgg 15090
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 caccgtcacctctggtgggc 295 |||||||||||||||||||| Sbjct: 1785339 caccgtcacctctggtgggc 1785358
>ref|XM_467841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cctcctcttcctcctggccgtcgc 94 ||||||||||||||| |||||||| Sbjct: 86 cctcctcttcctcctcgccgtcgc 109
>ref|XM_506976.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1288_G09.19 mRNA Length = 898 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cctcctcttcctcctggccgtcgc 94 ||||||||||||||| |||||||| Sbjct: 91 cctcctcttcctcctcgccgtcgc 114
>ref|XM_465613.1| Oryza sativa (japonica cultivar-group), mRNA Length = 285 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ccacctccaccgtcacctct 288 |||||||||||||||||||| Sbjct: 175 ccacctccaccgtcacctct 156
>ref|NM_190668.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1359 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctcc 276 |||||||||||||||||||| Sbjct: 1207 ccgccgcccctgccacctcc 1188
>ref|NM_186683.1| Oryza sativa (japonica cultivar-group), mRNA Length = 882 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 tcgccgcgctcctcctcttcctcc 84 ||||||||||||||||| |||||| Sbjct: 34 tcgccgcgctcctcctcctcctcc 11
>ref|XM_506217.1| PREDICTED Oryza sativa (japonica cultivar-group), P0417F02.20 mRNA Length = 865 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 590 gcgctcctcctcttcctcct 609
>ref|XM_477009.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 600 gcgctcctcctcttcctcct 619
>ref|NM_023547.1| Mus musculus zinc finger, HIT type 4 (Znhit4), mRNA Length = 1038 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 407 tcctcctcttcctcctggcc 388
>gb|BC058788.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA clone MGC:65219 IMAGE:6440887), complete cds Length = 1161 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 453 tcctcctcttcctcctggcc 434
>gb|BC019383.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA clone MGC:30535 IMAGE:5010975), complete cds Length = 1155 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 441 tcctcctcttcctcctggcc 422
>gb|BC047990.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA clone IMAGE:6509498), partial cds Length = 1155 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 442 tcctcctcttcctcctggcc 423
>gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219634 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 49920 tcctcctcttcctcctggcc 49939
>ref|XM_426303.1| PREDICTED: Gallus gallus LOC428747 (LOC428747), mRNA Length = 3339 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 cggctcccctcccaccgccgcccc 266 ||||||||| |||||||||||||| Sbjct: 3030 cggctccccccccaccgccgcccc 3007
>gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, complete sequence Length = 213513 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 167026 ccgccgccactgccacctccaccg 167003
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tcgccgcgctcctcctcttcctcc 84 ||||||||||| |||||||||||| Sbjct: 42398 tcgccgcgctcgtcctcttcctcc 42421
>gb|AY452788.1| uncultured foraminiferan clone McM5 SSU ribosomal RNA gene, partial sequence Length = 960 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ccctcccaccgccgcccctg 268 |||||||||||||||||||| Sbjct: 276 ccctcccaccgccgcccctg 295
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tcgccgcgctcctcctcttcctcc 84 ||||||||||| |||||||||||| Sbjct: 142223 tcgccgcgctcgtcctcttcctcc 142246
>ref|XM_989990.1| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA Length = 6276 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 86 ccgccgccactgccacctccaccg 63
>ref|XM_910737.2| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA Length = 6276 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 86 ccgccgccactgccacctccaccg 63
>ref|XM_140310.8| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA Length = 6276 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 86 ccgccgccactgccacctccaccg 63
>ref|XM_976894.1| PREDICTED: Mus musculus similar to PDZ domain containing 2 (LOC669751), mRNA Length = 1317 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 accgccgcccctgccacctccacc 279 |||||||||||||||||| ||||| Sbjct: 846 accgccgcccctgccaccaccacc 823
>ref|XM_897627.2| PREDICTED: Mus musculus PDZ domain containing 2, transcript variant 5 (Pdzd2), mRNA Length = 4071 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 accgccgcccctgccacctccacc 279 |||||||||||||||||| ||||| Sbjct: 229 accgccgcccctgccaccaccacc 206
>ref|XM_920266.2| PREDICTED: Mus musculus PDZ domain containing 2, transcript variant 9 (Pdzd2), mRNA Length = 4071 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 accgccgcccctgccacctccacc 279 |||||||||||||||||| ||||| Sbjct: 229 accgccgcccctgccaccaccacc 206
>gb|AY364634.2| Rattus norvegicus FXNA mRNA, complete cds Length = 5095 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 3442 gcgctcctcctcttcctcct 3423
>gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosome 15, complete sequence Length = 206967 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 accgccgcccctgccacctccacc 279 |||||||||||||||||| ||||| Sbjct: 60792 accgccgcccctgccaccaccacc 60769
>ref|XM_801527.1| Trypanosoma cruzi strain CL Brener surface protease GP63 (Tc00.1047053509037.20) partial mRNA Length = 2310 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcctcctcttcctcctggc 88 |||||||||||||||||||| Sbjct: 1276 ctcctcctcttcctcctggc 1257
>ref|XM_806281.1| Trypanosoma cruzi strain CL Brener surface protease GP63 (Tc00.1047053507559.110) partial mRNA Length = 1968 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcctcctcttcctcctggc 88 |||||||||||||||||||| Sbjct: 1018 ctcctcctcttcctcctggc 999
>emb|CR711534.2|CNS0GBYY Tetraodon nigroviridis full-length cDNA Length = 654 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcctcctcttcctcctggc 88 |||||||||||||||||||| Sbjct: 180 ctcctcctcttcctcctggc 161
>emb|CR710999.2|CNS0GBK3 Tetraodon nigroviridis full-length cDNA Length = 1168 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcctcctcttcctcctggc 88 |||||||||||||||||||| Sbjct: 657 ctcctcctcttcctcctggc 638
>emb|CR702053.2|CNS0G4NL Tetraodon nigroviridis full-length cDNA Length = 1333 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcctcctcttcctcctggc 88 |||||||||||||||||||| Sbjct: 182 ctcctcctcttcctcctggc 163
>emb|CR691608.2|CNS0FWLG Tetraodon nigroviridis full-length cDNA Length = 1341 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcctcctcttcctcctggc 88 |||||||||||||||||||| Sbjct: 189 ctcctcctcttcctcctggc 170
>ref|NM_001896.2| Homo sapiens casein kinase 2, alpha prime polypeptide (CSNK2A2), mRNA Length = 1674 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 cgccgcgctcctcctcttcctcct 85 |||||||||||||||| ||||||| Sbjct: 13 cgccgcgctcctcctcctcctcct 36
>emb|AL512328.15| Human DNA sequence from clone RP11-505D24 on chromosome 1 Contains the 5' end of the AGT gene for angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8), the 5' end of the CAPN9 gene for calpain 9 (nCL-4) and the 3' end of a variant of a novel gene, complete sequence Length = 55722 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 6601 tcctcctcttcctcctggcc 6620
>emb|AL356119.31| Human DNA sequence from clone RP5-856H7 on chromosome 6 Contains the 5' part of the alternatively spliced gene for the human orthologs of mouse QKI-7 and QKI-7B (KH Domain RNA Binding proteins) and zebrafish ZKQ-1 (Quaking protein homolog) and a CpG island, complete sequence Length = 75152 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 23791 gcgctcctcctcttcctcct 23772
>gb|AY327039.1| Oryza sativa (japonica cultivar-group) iron transporter Fe3 mRNA, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccgtcgccgcgctcctcctc 77 |||||||||||||||||||| Sbjct: 67 ccgtcgccgcgctcctcctc 86
>emb|X68794.2|DMTENA Drosophila melanogaster mRNA for type II transmembrane protein (ten-a gene) Length = 10216 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gctcctcctcttcctcctgg 87 |||||||||||||||||||| Sbjct: 9193 gctcctcctcttcctcctgg 9174
>gb|AY436323.1| Homo sapiens angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8) (AGT) gene, complete cds Length = 15593 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 8675 tcctcctcttcctcctggcc 8656
>ref|NM_206855.1| Homo sapiens quaking homolog, KH domain RNA binding (mouse) (QKI), transcript variant 4, mRNA Length = 7919 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 77 gcgctcctcctcttcctcct 58
>ref|NM_206854.1| Homo sapiens quaking homolog, KH domain RNA binding (mouse) (QKI), transcript variant 3, mRNA Length = 6972 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 77 gcgctcctcctcttcctcct 58
>ref|NM_006775.1| Homo sapiens quaking homolog, KH domain RNA binding (mouse) (QKI), transcript variant 1, mRNA Length = 4731 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 77 gcgctcctcctcttcctcct 58
>ref|NM_206853.1| Homo sapiens quaking homolog, KH domain RNA binding (mouse) (QKI), transcript variant 2, mRNA Length = 5693 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 77 gcgctcctcctcttcctcct 58
>gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complete sequence Length = 115385 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gcccctgccacctccaccgtcacc 285 ||||| |||||||||||||||||| Sbjct: 31364 gcccccgccacctccaccgtcacc 31341
>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence Length = 127223 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gcccctgccacctccaccgtcacc 285 ||||| |||||||||||||||||| Sbjct: 122778 gcccccgccacctccaccgtcacc 122755
>gb|AY129446.1| Drosophila melanogaster LD20608 full insert cDNA Length = 4033 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gctcctcctcttcctcctgg 87 |||||||||||||||||||| Sbjct: 3009 gctcctcctcttcctcctgg 2990
>gb|AC023721.3| Drosophila melanogaster X BAC RP98-5L4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166902 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gctcctcctcttcctcctgg 87 |||||||||||||||||||| Sbjct: 2383 gctcctcctcttcctcctgg 2364
>gb|AC023687.3| Drosophila melanogaster X BAC RP98-36C7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185848 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gctcctcctcttcctcctgg 87 |||||||||||||||||||| Sbjct: 36120 gctcctcctcttcctcctgg 36139
>gb|AC095035.2| Homo sapiens chromosome 1 clone RP11-159J16, complete sequence Length = 173084 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cgctcctcctcttcctcctg 86 |||||||||||||||||||| Sbjct: 31493 cgctcctcctcttcctcctg 31512
>ref|NM_078582.3| Drosophila melanogaster Tenascin accessory CG32659-RA (Ten-a), mRNA Length = 10205 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gctcctcctcttcctcctgg 87 |||||||||||||||||||| Sbjct: 9189 gctcctcctcttcctcctgg 9170
>dbj|AK159017.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530033M09 product:PDZ domain containing 3, full insert sequence Length = 4071 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 accgccgcccctgccacctccacc 279 |||||||||||||||||| ||||| Sbjct: 229 accgccgcccctgccaccaccacc 206
>dbj|AK155473.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630230M04 product:hypothetical Alanine-rich region profile containing protein, full insert sequence Length = 1146 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 135 ccgccgccactgccacctccaccg 158
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ggcgaggtccgcgaccatcc 361 |||||||||||||||||||| Sbjct: 5225038 ggcgaggtccgcgaccatcc 5225019
>dbj|AK010946.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510009I23 product:PAPA-1, full insert sequence Length = 1200 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 509 tcctcctcttcctcctggcc 490
>gb|S79852.1| glucose-dependent insulinotropic polypeptide receptor [human, insulinoma cells, mRNA Partial, 1849 nt] Length = 1849 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1396 ctccggcccgggcgaggtcc 1415
>dbj|AK052308.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330025A21 product:hypothetical protein, full insert sequence Length = 1179 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 153 ccgccgccactgccacctccaccg 176
>gb|DQ350717.1| Ajellomyces capsulatus nitrosative stress induced transcription 64 (NIT64) gene, partial sequence Length = 2276 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 ctcctcctcttcctcctggccgtc 92 ||||||||||||||||| |||||| Sbjct: 503 ctcctcctcttcctcctcgccgtc 526
>gb|BC095494.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA clone IMAGE:7002006), partial cds Length = 1399 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1300 ctccggcccgggcgaggtcc 1319
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tcgccgcgctcctcctcttcctcc 84 ||||||||||| |||||||||||| Sbjct: 16401788 tcgccgcgctcgtcctcttcctcc 16401811
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tcgccgcgctcctcctcttcctcc 84 ||||||||||||||||| |||||| Sbjct: 7172931 tcgccgcgctcctcctcctcctcc 7172954 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 5349948 gcgctcctcctcttcctcct 5349967
>gb|BC093723.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA clone MGC:120758 IMAGE:7939568), complete cds Length = 1545 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1388 ctccggcccgggcgaggtcc 1407
>dbj|AB067808.2| Homo sapiens gene for RNA binding protein HQK, complete cds Length = 12194 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 77 gcgctcctcctcttcctcct 58
>dbj|D49559.2| Homo sapiens gene for gastric inhibitory polypeptide receptor, complete cds Length = 13809 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 13698 ctccggcccgggcgaggtcc 13717
>gb|AC009107.11| Homo sapiens chromosome 16 clone RP11-459F6, complete sequence Length = 208220 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 cgccgcgctcctcctcttcctcct 85 |||||||||||||||| ||||||| Sbjct: 69443 cgccgcgctcctcctcctcctcct 69420
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 tcccctcccaccgccgcccctgcc 270 |||||||||||| ||||||||||| Sbjct: 63951 tcccctcccaccaccgcccctgcc 63974
>ref|NM_184050.2| Rattus norvegicus putative aminopeptidase Fxna (Fxna), mRNA Length = 5095 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 3442 gcgctcctcctcttcctcct 3423
>ref|XM_233266.2| PREDICTED: Rattus norvegicus similar to hypothetical protein 4732467L16 (LOC298300), mRNA Length = 2552 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 465 tcctcctcttcctcctggcc 446
>ref|XM_575576.1| PREDICTED: Rattus norvegicus similar to PAP-1 binding protein (LOC500225), mRNA Length = 1667 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 789 tcctcctcttcctcctggcc 770
>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1402_H07 Length = 140620 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctcc 276 |||||||||||||||||||| Sbjct: 96696 ccgccgcccctgccacctcc 96677
>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683F02 Length = 153388 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctcc 276 |||||||||||||||||||| Sbjct: 7533 ccgccgcccctgccacctcc 7514
>dbj|AP004870.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419C03 Length = 146929 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ccacctccaccgtcacctct 288 |||||||||||||||||||| Sbjct: 38938 ccacctccaccgtcacctct 38919
>dbj|AK189382.1| Mus musculus cDNA, clone:Y0G0148P15, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032109, based on BLAT search Length = 207 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 89 tcctcctcttcctcctggcc 70
>dbj|AB054537.1| Mus musculus gene for PAPA-1, complete cds Length = 1237 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 502 tcctcctcttcctcctggcc 483
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tcgccgcgctcctcctcttcctcc 84 ||||||||||||||||| |||||| Sbjct: 13415 tcgccgcgctcctcctcctcctcc 13438
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tcgccgcgctcctcctcttcctcc 84 ||||||||||||||||| |||||| Sbjct: 199620 tcgccgcgctcctcctcctcctcc 199643
>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20, complete sequence Length = 151552 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cgctcctcctcttcctcctg 86 |||||||||||||||||||| Sbjct: 41981 cgctcctcctcttcctcctg 41962
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 84312 gcgctcctcctcttcctcct 84331
>emb|AJ307768.1|NSP307768 Nemogullmia sp. A330 partial 18S rRNA gene, isolate A330 Length = 1097 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ccctcccaccgccgcccctg 268 |||||||||||||||||||| Sbjct: 275 ccctcccaccgccgcccctg 294
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cctcctcttcctcctggccgtcgc 94 ||||||||||||||| |||||||| Sbjct: 74843 cctcctcttcctcctcgccgtcgc 74866
>dbj|AK104930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F02, full insert sequence Length = 801 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cctcctcttcctcctggccgtcgc 94 ||||||||||||||| |||||||| Sbjct: 86 cctcctcttcctcctcgccgtcgc 109
>dbj|AK071830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117F24, full insert sequence Length = 861 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 600 gcgctcctcctcttcctcct 619
>dbj|AK065736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038J04, full insert sequence Length = 898 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cctcctcttcctcctggccgtcgc 94 ||||||||||||||| |||||||| Sbjct: 91 cctcctcttcctcctcgccgtcgc 114
>dbj|AK060951.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-F08, full insert sequence Length = 865 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 590 gcgctcctcctcttcctcct 609
>emb|AL359207.7| Human DNA sequence from clone RP11-533N14 on chromosome 1 Contains the 3' end of the BCL9 gene for B-cell CLL/lymphoma 9 protein and a gene for lysophosphatidic acid phosphatase ACP6 protein, complete sequence Length = 112707 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 17742 tcctcctcttcctcctggcc 17723
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gcccgggcgaggtccgcgac 356 |||||||||||||||||||| Sbjct: 171853 gcccgggcgaggtccgcgac 171834
>gb|AC007191.1|AC007191 Homo sapiens chromosome 19, cosmid R34072, complete sequence Length = 43390 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1765 ctccggcccgggcgaggtcc 1784
>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete sequence Length = 315134 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gctcctcctcttcctcctgg 87 |||||||||||||||||||| Sbjct: 314018 gctcctcctcttcctcctgg 313999
>gb|AC006132.1|AC006132 Homo sapiens chromosome 19, cosmid R28204, complete sequence Length = 41572 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 41182 ctccggcccgggcgaggtcc 41201
>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete sequence Length = 193277 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcctcctcttcctcctggcc 89 |||||||||||||||||||| Sbjct: 160629 tcctcctcttcctcctggcc 160648
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tcgacgtcgtgcccaccgag 386 |||||||||||||||||||| Sbjct: 1907369 tcgacgtcgtgcccaccgag 1907350
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tcgccgcgctcctcctcttcctcc 84 ||||||||||| |||||||||||| Sbjct: 16492803 tcgccgcgctcgtcctcttcctcc 16492826
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cctcctcttcctcctggccg 90 |||||||||||||||||||| Sbjct: 1502353 cctcctcttcctcctggccg 1502334
>gb|AF025391.1|AF025391 Thermus thermophilus DNA polymerase III holoenzyme tau subunit (dnaX) gene, complete cds Length = 2724 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cctcctcttcctcctggccg 90 |||||||||||||||||||| Sbjct: 493 cctcctcttcctcctggccg 474
>emb|AL928542.12| Mouse DNA sequence from clone RP23-338J24 on chromosome 4, complete sequence Length = 189983 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcctcctcttcctcctggc 88 |||||||||||||||||||| Sbjct: 51994 ctcctcctcttcctcctggc 52013
>gb|U39231.1|HSU39231 Human GIP receptor (GIPR) mRNA, complete cds Length = 2025 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1401 ctccggcccgggcgaggtcc 1420
>emb|X81832.1|HSGDIPR H.sapiens mRNA for glucose-dependant insulinotropic polypeptide receptor gene Length = 2181 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1863 ctccggcccgggcgaggtcc 1882
>emb|AJ001218.1|HSCGG16P5 Homo sapiens DNA for (CGG)n trinucleotide repeat region, isolate CL16-1 (Chr.16) Length = 2837 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 cgccgcgctcctcctcttcctcct 85 |||||||||||||||| ||||||| Sbjct: 1235 cgccgcgctcctcctcctcctcct 1212
>dbj|AB067801.1| Homo sapiens mRNA for RNA binding protein HQK-7B, complete cds Length = 7912 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 77 gcgctcctcctcttcctcct 58
>dbj|AB067800.1| Homo sapiens mRNA for RNA binding protein HQK-7, complete cds Length = 6965 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 77 gcgctcctcctcttcctcct 58
>dbj|AB067799.1| Homo sapiens mRNA for RNA binding protein HQK-6, complete cds Length = 5686 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 77 gcgctcctcctcttcctcct 58
>dbj|AB067798.1| Homo sapiens mRNA for RNA binding protein HQK-5, complete cds Length = 4664 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcgctcctcctcttcctcct 85 |||||||||||||||||||| Sbjct: 77 gcgctcctcctcttcctcct 58 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,191,345 Number of Sequences: 3902068 Number of extensions: 3191345 Number of successful extensions: 142301 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 180 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140692 Number of HSP's gapped (non-prelim): 1609 length of query: 402 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 380 effective length of database: 17,147,199,772 effective search space: 6515935913360 effective search space used: 6515935913360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
