ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart20a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_493896.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
2gb|AY348312.1| Oryza sativa (indica cultivar-group) GPRP mRNA, c... 62 2e-06
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
4dbj|AK099495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
5dbj|AK071554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
6dbj|AK068289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
7dbj|AK060883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
8dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0... 62 2e-06
9emb|AJ242804.1|SST242804 Sporobolus stapfianus mRNA for putative... 54 5e-04
10gb|AF332722.1| Oryza sativa unknown mRNA 52 0.002
11ref|XM_493893.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
12ref|XM_468799.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.033
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.033
14gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genom... 48 0.033
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
16dbj|AK058643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.033
17ref|NM_102909.2| Arabidopsis thaliana rhodopsin-like receptor AT... 46 0.13
18gb|AC118686.8| Mus musculus chromosome 6, clone RP23-402P24, com... 46 0.13
19gb|AC074360.5|AC074360 Arabidopsis thaliana chromosome 1 BAC F27... 46 0.13
20gb|AC079041.4|AC079041 Arabidopsis thaliana chromosome 1 BAC F5M... 46 0.13
21gb|AY085309.1| Arabidopsis thaliana clone 144447 mRNA, complete ... 46 0.13
22gb|AF122022.1|AF122022 Eufolliculina uhligi clone EuT11 unknown ... 46 0.13
23gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 44 0.51
24gb|AY389580.1| Hyacinthus orientalis unknown mRNA 42 2.0
25ref|XM_392255.2| PREDICTED: Apis mellifera similar to fasciclin ... 42 2.0
26gb|AC122562.8| Mus musculus chromosome 5, clone RP24-103L16, com... 40 8.0
27ref|XM_493895.1| Oryza sativa (japonica cultivar-group), predic... 40 8.0
28ref|XM_478917.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.0
29ref|XM_614446.2| PREDICTED: Bos taurus similar to Vpr-binding pr... 40 8.0
30ref|XM_421979.1| PREDICTED: Gallus gallus similar to connectin/t... 40 8.0
31ref|NM_004407.1| Homo sapiens dentin matrix acidic phosphoprotei... 40 8.0
32gb|BC053208.1| Danio rerio annexin A11a, transcript variant 2, m... 40 8.0
33ref|XM_713379.1| Candida albicans SC5314 hypothetical protein (C... 40 8.0
34ref|XM_713378.1| Candida albicans SC5314 hypothetical protein (C... 40 8.0
35gb|BC065062.1| Mus musculus synovial sarcoma translocation, Chro... 40 8.0
36ref|XM_542870.2| PREDICTED: Canis familiaris similar to GTPase a... 40 8.0
37gb|AC121877.2| Mus musculus BAC clone RP24-127G8 from 7, complet... 40 8.0
38gb|AC102692.6| Mus musculus chromosome 18, clone RP24-491K18, co... 40 8.0
39gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map... 40 8.0
40gb|AY178801.1| Danio rerio annexin 11a mRNA, complete cds 40 8.0
41gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 8.0
42emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, co... 40 8.0
43gb|BC096742.1| Mus musculus synovial sarcoma translocation, Chro... 40 8.0
44dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 8.0
45dbj|AB211523.1| Lycopersicon esculentum mRNA for hypothetical pr... 40 8.0
46dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.0
47gb|AC093895.3| Homo sapiens BAC clone RP11-716M23 from 4, comple... 40 8.0
48gb|AC093906.3| Homo sapiens BAC clone RP11-742B18 from 4, comple... 40 8.0
49dbj|AK149325.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 8.0
50gb|AY055726.2| Mus musculus synovial sarcoma associated SS18 (Ss... 40 8.0
51ref|XM_678528.1| PREDICTED: Danio rerio similar to annexin 11a, ... 40 8.0
52ref|XM_702016.1| PREDICTED: Danio rerio similar to annexin 11a, ... 40 8.0
53ref|XM_702015.1| PREDICTED: Danio rerio similar to annexin 11a, ... 40 8.0
54dbj|AK166053.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 40 8.0
55dbj|AK052476.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful... 40 8.0
56dbj|AK051601.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 8.0
57dbj|AK083887.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 8.0
58dbj|AK083622.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 8.0
59dbj|AK087147.1| Mus musculus 0 day neonate lung cDNA, RIKEN full... 40 8.0
60dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
61dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
62gb|AC158624.4| Mus musculus BAC RP23-299I16 (Roswell Park Cance... 40 8.0
63ref|NM_183410.1| Danio rerio annexin A11a (anxa11a), transcript ... 40 8.0
64ref|NM_181765.1| Danio rerio annexin A11a (anxa11a), transcript ... 40 8.0
65ref|XM_341580.2| PREDICTED: Rattus norvegicus synovial sarcoma t... 40 8.0
66dbj|AK183049.1| Mus musculus cDNA, clone:Y0G0124I24, strand:plus... 40 8.0
67dbj|AK179801.1| Mus musculus cDNA, clone:Y0G0111L24, strand:plus... 40 8.0
68dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 8.0
69dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
70gb|AF159173.1|AF159173 Gallus gallus structural muscle protein t... 40 8.0
71dbj|AK070285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
72dbj|AK067943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
73emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 8.0
74dbj|AK065995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
75gb|BC083824.1| Rattus norvegicus synovial sarcoma translocation,... 40 8.0
76gb|U89012.1|HSU89012 Homo sapiens dentin matrix acidic phosphopr... 40 8.0
77gb|AC153968.3| Mus musculus 10 BAC RP24-343C11 (Roswell Park Can... 40 8.0
78gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
79emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.0
80emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.0
81emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587... 40 8.0
82gb|AC151534.2| Mus musculus BAC clone RP23-446E13 from 7, comple... 40 8.0
83gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 40 8.0
84gb|AF019629.1|AF019629 Actinomyces naeslundii fimbrial structura... 40 8.0
85ref|NM_009280.1| Mus musculus synovial sarcoma translocation, Ch... 40 8.0
86gb|U65378.1|HSU65378 Human dentin matrix protein 1 mRNA, complet... 40 8.0
87gb|AF170026.2| Chlamydomonas reinhardtii core subunit of photosy... 40 8.0
88gb|AC164160.5| Mus musculus BAC clone RP23-343P15 from chromosom... 40 8.0
89emb|AL928797.6| Mouse DNA sequence from clone RP23-178B19 on chr... 40 8.0
90emb|X93357.1|MMSYTMRNA M.musculus mRNA for SYT 40 8.0
91dbj|D83390.1| Gallus gallus mRNA for connectin/titin, partial cds 40 8.0
92gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 8.0 
>ref|XM_493896.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 426

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 229 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 288
           ||||||||| | || || ||||| || ||||| |||||||||||||||||  ||||||||
Sbjct: 60  tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 119

                      
Query: 289 gcgtaccctcc 299
           || ||||||||
Sbjct: 120 gcataccctcc 130
to top
>gb|AY348312.1| Oryza sativa (indica cultivar-group) GPRP mRNA, complete cds
          Length = 640

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 229 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 288
           ||||||||| | || || ||||| || ||||| |||||||||||||||||  ||||||||
Sbjct: 163 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 222

                      
Query: 289 gcgtaccctcc 299
           || ||||||||
Sbjct: 223 gcataccctcc 233



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 331 aaggggctcctctccaacatcatgcacggcgttgccgg 368
           ||||||||| |||| ||||| |||||||||||||||||
Sbjct: 61  aaggggctcttctctaacatgatgcacggcgttgccgg 98
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                          
Query: 229    tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 288
              ||||||||| | || || ||||| || ||||| |||||||||||||||||  ||||||||
Sbjct: 941436 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 941377

                         
Query: 289    gcgtaccctcc 299
              || ||||||||
Sbjct: 941376 gcataccctcc 941366



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 331    aaggggctcctctccaacatcatgcacggcgttgccgg 368
              ||||||||| |||| ||||| |||||||||||||||||
Sbjct: 941538 aaggggctcttctctaacatgatgcacggcgttgccgg 941501



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 331    aaggggctcctctccaacatcatgcacggcgttgccgg 368
              ||||||||| |||||||| ||||||||||||| |||||
Sbjct: 933779 aaggggctcgtctccaacctcatgcacggcgtcgccgg 933742



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 333    ggggctcctctccaacatcatgcacggcgttgccgg 368
              ||||||| |||||||| | ||||||||||| |||||
Sbjct: 938673 ggggctcttctccaacctgatgcacggcgtcgccgg 938638
to top
>dbj|AK099495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027I01, full
           insert sequence
          Length = 928

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 229 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 288
           ||||||||| | || || ||||| || ||||| |||||||||||||||||  ||||||||
Sbjct: 249 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 308

                      
Query: 289 gcgtaccctcc 299
           || ||||||||
Sbjct: 309 gcataccctcc 319



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 331 aaggggctcctctccaacatcatgcacggcgttgccgg 368
           ||||||||| |||| ||||| |||||||||||||||||
Sbjct: 147 aaggggctcttctctaacatgatgcacggcgttgccgg 184
to top
>dbj|AK071554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104E19, full
           insert sequence
          Length = 926

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 229 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 288
           ||||||||| | || || ||||| || ||||| |||||||||||||||||  ||||||||
Sbjct: 248 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 307

                      
Query: 289 gcgtaccctcc 299
           || ||||||||
Sbjct: 308 gcataccctcc 318



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 331 aaggggctcctctccaacatcatgcacggcgttgccgg 368
           ||||||||| |||| ||||| |||||||||||||||||
Sbjct: 146 aaggggctcttctctaacatgatgcacggcgttgccgg 183
to top
>dbj|AK068289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147E18, full
           insert sequence
          Length = 2163

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 229 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 288
           ||||||||| | || || ||||| || ||||| |||||||||||||||||  ||||||||
Sbjct: 920 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 979

                      
Query: 289 gcgtaccctcc 299
           || ||||||||
Sbjct: 980 gcataccctcc 990



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 331 aaggggctcctctccaacatcatgcacggcgttgccgg 368
           ||||||||| |||| ||||| |||||||||||||||||
Sbjct: 818 aaggggctcttctctaacatgatgcacggcgttgccgg 855
to top
>dbj|AK060883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B01, full
           insert sequence
          Length = 1481

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 229 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 288
           ||||||||| | || || ||||| || ||||| |||||||||||||||||  ||||||||
Sbjct: 247 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 306

                      
Query: 289 gcgtaccctcc 299
           || ||||||||
Sbjct: 307 gcataccctcc 317



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 331 aaggggctcctctccaacatcatgcacggcgttgccgg 368
           ||||||||| |||| ||||| |||||||||||||||||
Sbjct: 145 aaggggctcttctctaacatgatgcacggcgttgccgg 182
to top
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04
          Length = 175439

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 229   tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 288
             ||||||||| | || || ||||| || ||||| |||||||||||||||||  ||||||||
Sbjct: 31833 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 31774

                        
Query: 289   gcgtaccctcc 299
             || ||||||||
Sbjct: 31773 gcataccctcc 31763



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 331   aaggggctcctctccaacatcatgcacggcgttgccgg 368
             ||||||||| |||| ||||| |||||||||||||||||
Sbjct: 31935 aaggggctcttctctaacatgatgcacggcgttgccgg 31898



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 331   aaggggctcctctccaacatcatgcacggcgttgccgg 368
             ||||||||| |||||||| ||||||||||||| |||||
Sbjct: 24176 aaggggctcgtctccaacctcatgcacggcgtcgccgg 24139



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 333   ggggctcctctccaacatcatgcacggcgttgccgg 368
             ||||||| |||||||| | ||||||||||| |||||
Sbjct: 29070 ggggctcttctccaacctgatgcacggcgtcgccgg 29035
to top
>emb|AJ242804.1|SST242804 Sporobolus stapfianus mRNA for putative glycine and proline-rich
           protein
          Length = 855

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 250 tacccacctccacctggggcttaccctcccgcacctggggcgtaccctcct 300
           ||||||||||| || ||||| || |||||| |||||||||| |||||||||
Sbjct: 221 tacccacctcccccaggggcgtatcctcccccacctggggcataccctcct 271



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 259 ccacctggggcttaccctcccgcacctggggcgtaccc 296
           ||||||||||| ||||||||  |||||||||| |||||
Sbjct: 251 ccacctggggcataccctcctccacctggggcataccc 288



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 239 cacctggagcttacccacctccacctggggcttaccc 275
           ||||||| || ||||| |||||||||||||| |||||
Sbjct: 252 cacctggggcataccctcctccacctggggcataccc 288
to top
>gb|AF332722.1| Oryza sativa unknown mRNA
          Length = 801

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 331 aaggggctcctctccaacatcatgcacggcgttgccgg 368
           ||||||||| |||||||| ||||||||||||| |||||
Sbjct: 80  aaggggctcgtctccaacctcatgcacggcgtcgccgg 117
to top
>ref|XM_493893.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 534

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 331 aaggggctcctctccaacatcatgcacggcgttgccgg 368
           ||||||||| |||||||| ||||||||||||| |||||
Sbjct: 13  aaggggctcgtctccaacctcatgcacggcgtcgccgg 50
to top
>ref|XM_468799.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 665

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 430 ggataccctccgcaacaggggtaccctcctcagcatggataccc 473
           |||||||||||||| ||||||||||| || ||||| || |||||
Sbjct: 175 ggataccctccgcagcaggggtacccgccgcagcagggctaccc 218



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 gggtacccgccgcagcaggg 206
           ||||||||||||||||||||
Sbjct: 193 gggtacccgccgcagcaggg 212
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 430      ggataccctccgcaacaggggtaccctcctcagcatggataccc 473
                |||||||||||||| ||||||||||| || ||||| || |||||
Sbjct: 17898213 ggataccctccgcagcaggggtacccgccgcagcagggctaccc 17898256



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 187      gggtacccgccgcagcaggg 206
                ||||||||||||||||||||
Sbjct: 17898231 gggtacccgccgcagcaggg 17898250
to top
>gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genomic sequence, complete
              sequence
          Length = 142896

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 430    ggataccctccgcaacaggggtaccctcctcagcatggataccc 473
              |||||||||||||| ||||||||||| || ||||| || |||||
Sbjct: 124079 ggataccctccgcagcaggggtacccgccgcagcagggctaccc 124036



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    gggtacccgccgcagcaggg 206
              ||||||||||||||||||||
Sbjct: 124061 gggtacccgccgcagcaggg 124042
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 430      ggataccctccgcaacaggggtaccctcctcagcatggataccc 473
                |||||||||||||| ||||||||||| || ||||| || |||||
Sbjct: 17891754 ggataccctccgcagcaggggtacccgccgcagcagggctaccc 17891797



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 187      gggtacccgccgcagcaggg 206
                ||||||||||||||||||||
Sbjct: 17891772 gggtacccgccgcagcaggg 17891791
to top
>dbj|AK058643.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-E06, full
           insert sequence
          Length = 665

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 430 ggataccctccgcaacaggggtaccctcctcagcatggataccc 473
           |||||||||||||| ||||||||||| || ||||| || |||||
Sbjct: 175 ggataccctccgcagcaggggtacccgccgcagcagggctaccc 218



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 gggtacccgccgcagcaggg 206
           ||||||||||||||||||||
Sbjct: 193 gggtacccgccgcagcaggg 212
to top
>ref|NM_102909.2| Arabidopsis thaliana rhodopsin-like receptor AT1G31750 mRNA,
           complete cds
          Length = 727

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 247 gcttacccacctccacctggggcttaccctcccgc 281
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 221 gcttacccacctccacccggtgcttatcctcccgc 255
to top
>gb|AC118686.8| Mus musculus chromosome 6, clone RP23-402P24, complete sequence
          Length = 223851

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 304    cctggagcaggtggcagtgatgg 326
              |||||||||||||||||||||||
Sbjct: 182100 cctggagcaggtggcagtgatgg 182122
to top
>gb|AC074360.5|AC074360 Arabidopsis thaliana chromosome 1 BAC F27M3 genomic sequence,
            complete sequence
          Length = 110664

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 247  gcttacccacctccacctggggcttaccctcccgc 281
            ||||||||||||||||| || ||||| ||||||||
Sbjct: 7641 gcttacccacctccacccggtgcttatcctcccgc 7675
to top
>gb|AC079041.4|AC079041 Arabidopsis thaliana chromosome 1 BAC F5M6 genomic sequence, complete
              sequence
          Length = 119420

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 247    gcttacccacctccacctggggcttaccctcccgc 281
              ||||||||||||||||| || ||||| ||||||||
Sbjct: 117283 gcttacccacctccacccggtgcttatcctcccgc 117317
to top
>gb|AY085309.1| Arabidopsis thaliana clone 144447 mRNA, complete sequence
          Length = 708

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 247 gcttacccacctccacctggggcttaccctcccgc 281
           ||||||||||||||||| || ||||| ||||||||
Sbjct: 217 gcttacccacctccacccggtgcttatcctcccgc 251
to top
>gb|AF122022.1|AF122022 Eufolliculina uhligi clone EuT11 unknown mRNA
          Length = 817

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 445 caggggtaccctcctcagcatggataccctccccagcag 483
           ||||| |||||||||||||| | ||| ||||||||||||
Sbjct: 415 cagggataccctcctcagcaagcatatcctccccagcag 453



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 433 taccctccgcaacaggggtaccctcctcagcatggataccctccccagca 482
           |||||||| ||||| || || |||||||| || || ||||||||||||||
Sbjct: 691 taccctcctcaacaaggctatcctcctcaacaaggctaccctccccagca 740
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 21      atcgtcagttcgtcgtcgtccatccagatc 50
               ||||||||||||||||||  ||||||||||
Sbjct: 2523534 atcgtcagttcgtcgtcgctcatccagatc 2523505
to top
>gb|AY389580.1| Hyacinthus orientalis unknown mRNA
          Length = 524

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 171 gggataccctccggcagggtacccgccgc 199
           ||||||||||||| | |||||||||||||
Sbjct: 187 gggataccctccgcctgggtacccgccgc 159
to top
>ref|XM_392255.2| PREDICTED: Apis mellifera similar to fasciclin IV (LOC408719),
            partial mRNA
          Length = 1741

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 61   ctccttctccgacctcgcggaatcg 85
            ||||| |||||||||||||||||||
Sbjct: 1208 ctcctcctccgacctcgcggaatcg 1232
to top
>gb|AC122562.8| Mus musculus chromosome 5, clone RP24-103L16, complete sequence
          Length = 172210

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 367   ggtgctcatggtggtggtcatggg 390
             |||| |||||||||||||||||||
Sbjct: 53136 ggtggtcatggtggtggtcatggg 53113
to top
>ref|XM_493895.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 513

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 333 ggggctcctctccaacatcatgcacggcgttgccgg 368
           ||||||| |||||||| | ||||||||||| |||||
Sbjct: 33  ggggctcttctccaacctgatgcacggcgtcgccgg 68
to top
>ref|XM_478917.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 606

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 175 taccctccggcagggtacccgccgcagcaggg 206
           ||||| ||||| |||||||| |||||||||||
Sbjct: 179 tacccaccggctgggtaccccccgcagcaggg 210
to top
>ref|XM_614446.2| PREDICTED: Bos taurus similar to Vpr-binding protein (LOC541079),
            mRNA
          Length = 5717

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 496  ccacagcagcatggctaccc 515
            ||||||||||||||||||||
Sbjct: 2461 ccacagcagcatggctaccc 2442
to top
>ref|XM_421979.1| PREDICTED: Gallus gallus similar to connectin/titin (LOC424126), mRNA
          Length = 21522

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  tcaagagcaatgggaggagg 134
            ||||||||||||||||||||
Sbjct: 9669 tcaagagcaatgggaggagg 9688
to top
>ref|NM_004407.1| Homo sapiens dentin matrix acidic phosphoprotein (DMP1), mRNA
          Length = 2682

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 aggtggcagtgatggggaga 331
           ||||||||||||||||||||
Sbjct: 684 aggtggcagtgatggggaga 703
to top
>gb|BC053208.1| Danio rerio annexin A11a, transcript variant 2, mRNA (cDNA clone
           MGC:64024 IMAGE:6793195), complete cds
          Length = 2090

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 228 ttacccgcctgcacctggagcttacccacctccacctggg 267
           |||||| |||||| | |||| ||||||||||| |||||||
Sbjct: 116 ttaccctcctgcagcaggaggttacccacctcaacctggg 155
to top
>ref|XM_713379.1| Candida albicans SC5314 hypothetical protein (CaO19_2449), mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 366 cggtgctcatggtggtggtcatgg 389
           ||||| ||||||||||||||||||
Sbjct: 948 cggtggtcatggtggtggtcatgg 971
to top
>ref|XM_713378.1| Candida albicans SC5314 hypothetical protein (CaO19_2448), mRNA
          Length = 528

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 366 cggtgctcatggtggtggtcatgg 389
           ||||| ||||||||||||||||||
Sbjct: 307 cggtggtcatggtggtggtcatgg 284
to top
>gb|BC065062.1| Mus musculus synovial sarcoma translocation, Chromosome 18, mRNA
           (cDNA clone IMAGE:6416053), partial cds
          Length = 2854

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 454 cctcctcagcatggataccctccccagcagca 485
           ||||| ||||| |||||||| |||||||||||
Sbjct: 941 cctccacagcaaggatacccaccccagcagca 972
to top
>ref|XM_542870.2| PREDICTED: Canis familiaris similar to GTPase activating Rap/RanGAP
            domain-like 1 isoform 2 (LOC485747), mRNA
          Length = 6078

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 293  accctcctgctcctggagcaggtg 316
            ||||||||||||||||||| ||||
Sbjct: 5917 accctcctgctcctggagctggtg 5940
to top
>gb|AC121877.2| Mus musculus BAC clone RP24-127G8 from 7, complete sequence
          Length = 130451

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 540    tggtcacagtggtagccacggagg 563
              |||||||||||| |||||||||||
Sbjct: 124059 tggtcacagtggcagccacggagg 124036
to top
>gb|AC102692.6| Mus musculus chromosome 18, clone RP24-491K18, complete sequence
          Length = 225042

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 454    cctcctcagcatggataccctccccagcagca 485
              ||||| ||||| |||||||| |||||||||||
Sbjct: 176114 cctccacagcaaggatacccaccccagcagca 176145
to top
>gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map 1, complete sequence
          Length = 235509

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ggcttctccttctccgacct 75
             ||||||||||||||||||||
Sbjct: 98469 ggcttctccttctccgacct 98450
to top
>gb|AY178801.1| Danio rerio annexin 11a mRNA, complete cds
          Length = 2104

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 228 ttacccgcctgcacctggagcttacccacctccacctggg 267
           |||||| |||||| | |||| ||||||||||| |||||||
Sbjct: 146 ttaccctcctgcagcaggaggttacccacctcaacctggg 185
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 367     ggtgctcatggtggtggtcatggg 390
               |||||||||||| |||||||||||
Sbjct: 2447944 ggtgctcatggtcgtggtcatggg 2447921
to top
>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence
          Length = 116326

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 228   ttacccgcctgcacctggagcttacccacctccacctggg 267
             |||||| |||||| | |||| ||||||||||| |||||||
Sbjct: 98977 ttaccctcctgcagcaggaggttacccacctcaacctggg 98938
to top
>gb|BC096742.1| Mus musculus synovial sarcoma translocation, Chromosome 18, mRNA
           (cDNA clone MGC:102168 IMAGE:6416415), complete cds
          Length = 2914

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 454 cctcctcagcatggataccctccccagcagca 485
           ||||| ||||| |||||||| |||||||||||
Sbjct: 941 cctccacagcaaggatacccaccccagcagca 972
to top
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    tgctcatggtggtggtcatg 388
              ||||||||||||||||||||
Sbjct: 656075 tgctcatggtggtggtcatg 656094
to top
>dbj|AB211523.1| Lycopersicon esculentum mRNA for hypothetical protein, complete
           cds, clone:FC10DE01
          Length = 800

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 433 taccctccgcaacaggggtaccctcctcagca 464
           |||||||| ||||| ||||||||||| |||||
Sbjct: 208 taccctcctcaacaagggtaccctccacagca 239
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 367     ggtgctcatggtggtggtcatggg 390
               |||||||||||| |||||||||||
Sbjct: 1781365 ggtgctcatggtcgtggtcatggg 1781388
to top
>gb|AC093895.3| Homo sapiens BAC clone RP11-716M23 from 4, complete sequence
          Length = 171135

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   aggtggcagtgatggggaga 331
             ||||||||||||||||||||
Sbjct: 65053 aggtggcagtgatggggaga 65072
to top
>gb|AC093906.3| Homo sapiens BAC clone RP11-742B18 from 4, complete sequence
          Length = 189286

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    aggtggcagtgatggggaga 331
              ||||||||||||||||||||
Sbjct: 176567 aggtggcagtgatggggaga 176586
to top
>dbj|AK149325.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930026C14 product:synovial sarcoma translocation,
           Chromosome 18, full insert sequence
          Length = 2859

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 454 cctcctcagcatggataccctccccagcagca 485
           ||||| ||||| |||||||| |||||||||||
Sbjct: 966 cctccacagcaaggatacccaccccagcagca 997
to top
>gb|AY055726.2| Mus musculus synovial sarcoma associated SS18 (Ss18) gene, complete
             cds, alternatively spliced
          Length = 64533

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 454   cctcctcagcatggataccctccccagcagca 485
             ||||| ||||| |||||||| |||||||||||
Sbjct: 53218 cctccacagcaaggatacccaccccagcagca 53249
to top
>ref|XM_678528.1| PREDICTED: Danio rerio similar to annexin 11a, transcript variant 1
           (LOC560905), mRNA
          Length = 2314

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 228 ttacccgcctgcacctggagcttacccacctccacctggg 267
           |||||| |||||| | |||| ||||||||||| |||||||
Sbjct: 129 ttaccctcctgcagcaggaggttacccacctcaacctggg 168
to top
>ref|XM_702016.1| PREDICTED: Danio rerio similar to annexin 11a, transcript variant 3
           (LOC560905), mRNA
          Length = 1971

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 228 ttacccgcctgcacctggagcttacccacctccacctggg 267
           |||||| |||||| | |||| ||||||||||| |||||||
Sbjct: 129 ttaccctcctgcagcaggaggttacccacctcaacctggg 168
to top
>ref|XM_702015.1| PREDICTED: Danio rerio similar to annexin 11a, transcript variant 2
           (LOC560905), mRNA
          Length = 2296

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 228 ttacccgcctgcacctggagcttacccacctccacctggg 267
           |||||| |||||| | |||| ||||||||||| |||||||
Sbjct: 129 ttaccctcctgcagcaggaggttacccacctcaacctggg 168
to top
>dbj|AK166053.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
            library, clone:G730031E14 product:synovial sarcoma
            translocation, Chromosome 18, full insert sequence
          Length = 2943

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 454  cctcctcagcatggataccctccccagcagca 485
            ||||| ||||| |||||||| |||||||||||
Sbjct: 1050 cctccacagcaaggatacccaccccagcagca 1081
to top
>dbj|AK052476.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
           library, clone:D430032A14 product:synovial sarcoma
           translocation, Chromosome 18, full insert sequence
          Length = 2605

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 454 cctcctcagcatggataccctccccagcagca 485
           ||||| ||||| |||||||| |||||||||||
Sbjct: 736 cctccacagcaaggatacccaccccagcagca 767
to top
>dbj|AK051601.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130059H17 product:synovial
           sarcoma translocation, Chromosome 18, full insert
           sequence
          Length = 4154

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 454 cctcctcagcatggataccctccccagcagca 485
           ||||| ||||| |||||||| |||||||||||
Sbjct: 828 cctccacagcaaggatacccaccccagcagca 859
to top
>dbj|AK083887.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130045M12 product:synovial
            sarcoma translocation, Chromosome 18, full insert
            sequence
          Length = 2974

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 454  cctcctcagcatggataccctccccagcagca 485
            ||||| ||||| |||||||| |||||||||||
Sbjct: 1081 cctccacagcaaggatacccaccccagcagca 1112
to top
>dbj|AK083622.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030055F05 product:synovial
           sarcoma translocation, Chromosome 18, full insert
           sequence
          Length = 2859

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 454 cctcctcagcatggataccctccccagcagca 485
           ||||| ||||| |||||||| |||||||||||
Sbjct: 966 cctccacagcaaggatacccaccccagcagca 997
to top
>dbj|AK087147.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
            library, clone:E030029P18 product:unclassifiable, full
            insert sequence
          Length = 2411

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 367  ggtgctcatggtggtggtcatggg 390
            |||| |||||||||||||||||||
Sbjct: 1729 ggtggtcatggtggtggtcatggg 1752
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 46       agatcggctcggcttctcct 65
                ||||||||||||||||||||
Sbjct: 21056278 agatcggctcggcttctcct 21056259



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 58      cttctccttctccgacctcg 77
               ||||||||||||||||||||
Sbjct: 3152341 cttctccttctccgacctcg 3152360
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 175      taccctccggcagggtacccgccgcagcaggg 206
                ||||| ||||| |||||||| |||||||||||
Sbjct: 23728900 tacccaccggctgggtaccccccgcagcaggg 23728931
to top
>gb|AC158624.4| Mus musculus  BAC RP23-299I16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 174188

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    ccaacatcatgcacggcgtt 363
              ||||||||||||||||||||
Sbjct: 113491 ccaacatcatgcacggcgtt 113510
to top
>ref|NM_183410.1| Danio rerio annexin A11a (anxa11a), transcript variant 2, mRNA
          Length = 2090

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 228 ttacccgcctgcacctggagcttacccacctccacctggg 267
           |||||| |||||| | |||| ||||||||||| |||||||
Sbjct: 116 ttaccctcctgcagcaggaggttacccacctcaacctggg 155
to top
>ref|NM_181765.1| Danio rerio annexin A11a (anxa11a), transcript variant 1, mRNA
          Length = 2104

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 228 ttacccgcctgcacctggagcttacccacctccacctggg 267
           |||||| |||||| | |||| ||||||||||| |||||||
Sbjct: 146 ttaccctcctgcagcaggaggttacccacctcaacctggg 185
to top
>ref|XM_341580.2| PREDICTED: Rattus norvegicus synovial sarcoma translocation,
            Chromosome 18 (predicted) (Ss18_predicted), mRNA
          Length = 3277

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 454  cctcctcagcatggataccctccccagcagca 485
            ||||| ||||| |||||||| |||||||||||
Sbjct: 1393 cctccacagcaaggatacccaccccagcagca 1424
to top
>dbj|AK183049.1| Mus musculus cDNA, clone:Y0G0124I24, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000041253, based on BLAT search
          Length = 203

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 454 cctcctcagcatggataccctccccagcagca 485
           ||||| ||||| |||||||| |||||||||||
Sbjct: 162 cctccacagcaaggatacccaccccagcagca 193
to top
>dbj|AK179801.1| Mus musculus cDNA, clone:Y0G0111L24, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000040964, based on BLAT search
          Length = 293

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 454 cctcctcagcatggataccctccccagcagca 485
           ||||| ||||| |||||||| |||||||||||
Sbjct: 252 cctccacagcaaggatacccaccccagcagca 283
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 357     cggcgttgccggtgctcatg 376
               ||||||||||||||||||||
Sbjct: 1503882 cggcgttgccggtgctcatg 1503901
to top
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 175   taccctccggcagggtacccgccgcagcaggg 206
             ||||| ||||| |||||||| |||||||||||
Sbjct: 73514 tacccaccggctgggtaccccccgcagcaggg 73545
to top
>gb|AF159173.1|AF159173 Gallus gallus structural muscle protein titin mRNA, partial cds
          Length = 6492

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  tcaagagcaatgggaggagg 134
            ||||||||||||||||||||
Sbjct: 4770 tcaagagcaatgggaggagg 4789
to top
>dbj|AK070285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048B07, full
           insert sequence
          Length = 606

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 175 taccctccggcagggtacccgccgcagcaggg 206
           ||||| ||||| |||||||| |||||||||||
Sbjct: 179 tacccaccggctgggtaccccccgcagcaggg 210
to top
>dbj|AK067943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122C02, full
           insert sequence
          Length = 865

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 333 ggggctcctctccaacatcatgcacggcgttgccgg 368
           ||||||| |||||||| | ||||||||||| |||||
Sbjct: 98  ggggctcttctccaacctgatgcacggcgtcgccgg 133
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 358     ggcgttgccggtgctcatgg 377
               ||||||||||||||||||||
Sbjct: 5284470 ggcgttgccggtgctcatgg 5284451
to top
>dbj|AK065995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048G15, full
           insert sequence
          Length = 1308

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  cttctccttctccgacctcg 77
           ||||||||||||||||||||
Sbjct: 183 cttctccttctccgacctcg 202
to top
>gb|BC083824.1| Rattus norvegicus synovial sarcoma translocation, Chromosome 18,
           mRNA (cDNA clone IMAGE:7112118), partial cds
          Length = 2867

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 454 cctcctcagcatggataccctccccagcagca 485
           ||||| ||||| |||||||| |||||||||||
Sbjct: 957 cctccacagcaaggatacccaccccagcagca 988
to top
>gb|U89012.1|HSU89012 Homo sapiens dentin matrix acidic phosphoprotein 1 (DMP1) mRNA,
           complete cds
          Length = 2682

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 aggtggcagtgatggggaga 331
           ||||||||||||||||||||
Sbjct: 684 aggtggcagtgatggggaga 703
to top
>gb|AC153968.3| Mus musculus 10 BAC RP24-343C11 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 151710

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   ccaacatcatgcacggcgtt 363
             ||||||||||||||||||||
Sbjct: 49191 ccaacatcatgcacggcgtt 49210
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 46       agatcggctcggcttctcct 65
                ||||||||||||||||||||
Sbjct: 20982487 agatcggctcggcttctcct 20982468



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 58      cttctccttctccgacctcg 77
               ||||||||||||||||||||
Sbjct: 3152286 cttctccttctccgacctcg 3152305
to top
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 58   cttctccttctccgacctcg 77
            ||||||||||||||||||||
Sbjct: 2502 cttctccttctccgacctcg 2483
to top
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 182172

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     agatcggctcggcttctcct 65
              ||||||||||||||||||||
Sbjct: 141763 agatcggctcggcttctcct 141744
to top
>emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587_D05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 90756

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cttctccttctccgacctcg 77
             ||||||||||||||||||||
Sbjct: 65323 cttctccttctccgacctcg 65304
to top
>gb|AC151534.2| Mus musculus BAC clone RP23-446E13 from 7, complete sequence
          Length = 184053

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 540   tggtcacagtggtagccacggagg 563
             |||||||||||| |||||||||||
Sbjct: 87504 tggtcacagtggcagccacggagg 87527
to top
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    atcggctcggcttctccttc 67
             ||||||||||||||||||||
Sbjct: 66252 atcggctcggcttctccttc 66271
to top
>gb|AF019629.1|AF019629 Actinomyces naeslundii fimbrial structural subunit (fimA) and
            putative fimbria-associated protein genes, complete cds
          Length = 3673

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   cgtcgtcgtccatccagatc 50
            ||||||||||||||||||||
Sbjct: 3353 cgtcgtcgtccatccagatc 3334
to top
>ref|NM_009280.1| Mus musculus synovial sarcoma translocation, Chromosome 18 (Ss18),
            mRNA
          Length = 3107

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 454  cctcctcagcatggataccctccccagcagca 485
            ||||| ||||| |||||||| |||||||||||
Sbjct: 1197 cctccacagcaaggatacccaccccagcagca 1228
to top
>gb|U65378.1|HSU65378 Human dentin matrix protein 1 mRNA, complete cds
          Length = 2640

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 aggtggcagtgatggggaga 331
           ||||||||||||||||||||
Sbjct: 636 aggtggcagtgatggggaga 655
to top
>gb|AF170026.2| Chlamydomonas reinhardtii core subunit of photosystem II precursor
           (psbW) gene, complete cds; nuclear gene for chloroplast
           product
          Length = 1999

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 516 ccctgccggctaccctggct 535
           ||||||||||||||||||||
Sbjct: 859 ccctgccggctaccctggct 878
to top
>gb|AC164160.5| Mus musculus BAC clone RP23-343P15 from chromosome 7, complete sequence
          Length = 235030

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 540    tggtcacagtggtagccacggagg 563
              |||||||||||| |||||||||||
Sbjct: 219873 tggtcacagtggcagccacggagg 219850
to top
>emb|AL928797.6| Mouse DNA sequence from clone RP23-178B19 on chromosome 2, complete
             sequence
          Length = 166185

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 454   cctcctcagcatggataccctccccagcagca 485
             ||||| ||||| |||||||| |||||||||||
Sbjct: 21581 cctccacagcaaggatacccaccccagcagca 21612
to top
>emb|X93357.1|MMSYTMRNA M.musculus mRNA for SYT
          Length = 3107

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 454  cctcctcagcatggataccctccccagcagca 485
            ||||| ||||| |||||||| |||||||||||
Sbjct: 1197 cctccacagcaaggatacccaccccagcagca 1228
to top
>dbj|D83390.1| Gallus gallus mRNA for connectin/titin, partial cds
          Length = 12699

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  tcaagagcaatgggaggagg 134
            ||||||||||||||||||||
Sbjct: 4452 tcaagagcaatgggaggagg 4471
to top
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    tgctcatggtggtggtcatg 388
              ||||||||||||||||||||
Sbjct: 964731 tgctcatggtggtggtcatg 964712


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,516,625
Number of Sequences: 3902068
Number of extensions: 4516625
Number of successful extensions: 96296
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95443
Number of HSP's gapped (non-prelim): 839
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top