Clone Name | bart20a07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB108306.1| Phleum pratense DNA, SSR, microsatellite B02-A08 Length = 516 Score = 111 bits (56), Expect = 2e-21 Identities = 120/140 (85%), Gaps = 1/140 (0%) Strand = Plus / Minus Query: 306 ggcatggagtgaagatgcaactgaactgctgggcagatggagcg-gcgatgataacccaa 364 |||||||||||||| |||||| || || ||||| |||||| | ||||||||||| ||| Sbjct: 327 ggcatggagtgaagcagcaactcaattgttgggctgatggacccagcgatgataacgcaa 268 Query: 365 tgccccatccagccaaacaagaacttcacctaccgattcgacgtcgtcggccaggaaggc 424 |||||||| ||||| || ||||| |||||||| |||||| ||||| |||| ||||| ||| Sbjct: 267 tgccccattcagccgaataagaatttcacctatcgattcaacgtcatcggtcaggagggc 208 Query: 425 acgctgtggtggcacgctca 444 |||||||||||||| ||||| Sbjct: 207 acgctgtggtggcatgctca 188
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 351 cgatgataacccaatgccccatccagccaaacaagaacttcacctaccgattcgacgtcg 410 ||||||| ||||| ||||||||||||| ||| | |||||||||||||| ||| |||||| Sbjct: 112109 cgatgatcacccagcgccccatccagcccaaccacaacttcacctaccggttcaacgtcg 112050 Query: 411 tcggccaggaaggcacgctgtggtggcacgctcacg 446 ||| |||||||| || |||||||||||||| |||| Sbjct: 112049 ccgggcaggaaggtaccctgtggtggcacgcgcacg 112014
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 351 cgatgataacccaatgccccatccagccaaacaagaacttcacctaccgattcgacgtcg 410 ||||||| ||||| ||||||||||||| ||| | |||||||||||||| ||| |||||| Sbjct: 9879630 cgatgatcacccagcgccccatccagcccaaccacaacttcacctaccggttcaacgtcg 9879571 Query: 411 tcggccaggaaggcacgctgtggtggcacgctcacg 446 ||| |||||||| || |||||||||||||| |||| Sbjct: 9879570 ccgggcaggaaggtaccctgtggtggcacgcgcacg 9879535 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 417 aggaaggcacgctgtggtggcacgc 441 |||| |||||||||||||||||||| Sbjct: 15145488 aggagggcacgctgtggtggcacgc 15145512
>dbj|AK110474.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-H06, full insert sequence Length = 2290 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 351 cgatgataacccaatgccccatccagccaaacaagaacttcacctaccgattcgacgtcg 410 ||||||| ||||| ||||||||||||| ||| | |||||||||||||| ||| |||||| Sbjct: 392 cgatgatcacccagcgccccatccagcccaaccacaacttcacctaccggttcaacgtcg 451 Query: 411 tcggccaggaaggcacgctgtggtggcacgctcacg 446 ||| |||||||| || |||||||||||||| |||| Sbjct: 452 ccgggcaggaaggtaccctgtggtggcacgcgcacg 487
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 351 cgatgataacccaatgccccatccagccaaacaagaacttcacctaccgattcgacgtcg 410 ||||||| ||||| ||||||||||||| ||| | |||||||||||||| ||| |||||| Sbjct: 9885669 cgatgatcacccagcgccccatccagcccaaccacaacttcacctaccggttcaacgtcg 9885610 Query: 411 tcggccaggaaggcacgctgtggtggcacgctcacg 446 ||| |||||||| || |||||||||||||| |||| Sbjct: 9885609 ccgggcaggaaggtaccctgtggtggcacgcgcacg 9885574 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 417 aggaaggcacgctgtggtggcacgc 441 |||| |||||||||||||||||||| Sbjct: 15153729 aggagggcacgctgtggtggcacgc 15153753
>gb|DQ135971.1| Triticum aestivum clone wmc(5b1.2) anchored-SSR primer sequence Length = 309 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 366 gccccatccagccaaacaagaacttcacctaccgattcgacgtcgtcggccaggaaggca 425 ||||||||||||||||| | ||||||||||||| |||||||| | ||| |||| ||||| Sbjct: 197 gccccatccagccaaaccacaacttcacctaccagttcgacgttgccgggcaggtaggca 256 Query: 426 cgctgtggtggcacgctca 444 | ||||||||||| ||||| Sbjct: 257 ccctgtggtggcatgctca 275
>gb|AF465469.1| Lolium perenne laccase LAC2-1 mRNA, complete cds Length = 2056 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 388 cttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgc 441 |||||||||||| |||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 344 cttcacctaccggttcgacgtggtcgggcaggagggcaccctgtggtggcacgc 397
>ref|NM_195906.1| Oryza sativa (japonica cultivar-group) putative laccase (OSJNBa0045C13.15), mRNA Length = 1596 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 351 cgatgataacccaatgccccatccagccaaacaagaacttcacctaccgattcgacgtcg 410 ||||||| ||||| ||||||||||||| ||| | |||||||||||||| ||| |||||| Sbjct: 335 cgatgatcacccagcgccccatccagcccaaccacaacttcacctaccggttcaacgtcg 394 Query: 411 tcggccaggaagg 423 ||| |||||||| Sbjct: 395 ccgggcaggaagg 407
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 386 aacttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgctcac 445 |||| ||| ||||| ||| |||||| ||| ||||| |||||||||||||||||||| ||| Sbjct: 9073913 aactacacgtaccggttcaacgtcgacgggcaggagggcacgctgtggtggcacgcccac 9073972 Query: 446 gt 447 || Sbjct: 9073973 gt 9073974 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Plus Query: 386 aacttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcac 439 |||| ||| ||||| ||| ||||| ||| ||||| |||||||||||||||||| Sbjct: 8960755 aactacacttaccggttcaacgtcaccgggcaggagggcacgctgtggtggcac 8960808 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 386 aacttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgc 441 |||| ||||||||| ||| ||||| || |||||| ||||| || ||||||||||| Sbjct: 8870224 aactacacctaccgcttcaacgtcagcgaccaggagggcaccctatggtggcacgc 8870279
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 386 aacttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgctcac 445 |||| ||| ||||| ||| |||||| ||| ||||| |||||||||||||||||||| ||| Sbjct: 9073798 aactacacgtaccggttcaacgtcgacgggcaggagggcacgctgtggtggcacgcccac 9073857 Query: 446 gt 447 || Sbjct: 9073858 gt 9073859 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Plus Query: 386 aacttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcac 439 |||| ||| ||||| ||| ||||| ||| ||||| |||||||||||||||||| Sbjct: 8960638 aactacacttaccggttcaacgtcaccgggcaggagggcacgctgtggtggcac 8960691 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 386 aacttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgc 441 |||| ||||||||| ||| ||||| || |||||| ||||| || ||||||||||| Sbjct: 8870107 aactacacctaccgcttcaacgtcagcgaccaggagggcaccctatggtggcacgc 8870162
>emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC OJ1471_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103007 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 386 aacttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgctcac 445 |||| ||| ||||| ||| |||||| ||| ||||| |||||||||||||||||||| ||| Sbjct: 44180 aactacacgtaccggttcaacgtcgacgggcaggagggcacgctgtggtggcacgcccac 44121 Query: 446 gt 447 || Sbjct: 44120 gt 44119
>ref|XM_476345.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1752 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 391 cacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgctcacgt 447 ||||||||| ||| ||||| ||| ||||| |||||||||||||||||||| ||||| Sbjct: 363 cacctaccgcttcaacgtcaccgggcaggagggcacgctgtggtggcacgcccacgt 419
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 391 cacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgctcacgt 447 ||||||||| ||| ||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 45316 cacctaccgcttcaacgtcaccggccaggtcggcacgctgtggtggcacgcccacgt 45372 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgctcacgt 447 |||||||||||||||||||| ||||| Sbjct: 54044 ggcacgctgtggtggcacgcccacgt 54069
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 391 cacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgctcacgt 447 ||||||||| ||| ||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 24568414 cacctaccgcttcaacgtcaccggccaggtcggcacgctgtggtggcacgcccacgt 24568470 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgctcacgt 447 |||||||||||||||||||| ||||| Sbjct: 24577142 ggcacgctgtggtggcacgcccacgt 24577167 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 417 aggaaggcacgctgtggtggcacgc 441 |||| |||||||||||||||||||| Sbjct: 27886571 aggagggcacgctgtggtggcacgc 27886547
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 391 cacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgctcacgt 447 ||||||||| ||| ||||| ||| ||||| |||||||||||||||||||| ||||| Sbjct: 59209 cacctaccgcttcaacgtcaccgggcaggagggcacgctgtggtggcacgcccacgt 59153
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 391 cacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgctcacgt 447 ||||||||| ||| ||||| ||| ||||| |||||||||||||||||||| ||||| Sbjct: 58508 cacctaccgcttcaacgtcaccgggcaggagggcacgctgtggtggcacgcccacgt 58452
>dbj|AK103094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118K21, full insert sequence Length = 2065 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 391 cacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgctcacgt 447 ||||||||| ||| ||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 428 cacctaccgcttcaacgtcaccggccaggtcggcacgctgtggtggcacgcccacgt 484
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 391 cacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgctcacgt 447 ||||||||| ||| ||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 24880084 cacctaccgcttcaacgtcaccggccaggtcggcacgctgtggtggcacgcccacgt 24880140 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgctcacgt 447 |||||||||||||||||||| ||||| Sbjct: 24888812 ggcacgctgtggtggcacgcccacgt 24888837 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 417 aggaaggcacgctgtggtggcacgc 441 |||| |||||||||||||||||||| Sbjct: 27910559 aggagggcacgctgtggtggcacgc 27910535
>ref|NM_193864.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1800 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 417 aggaaggcacgctgtggtggcacgctcac 445 ||||||||||||| ||||||||||||||| Sbjct: 374 aggaaggcacgctatggtggcacgctcac 402
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 417 aggaaggcacgctgtggtggcacgctcac 445 ||||||||||||| ||||||||||||||| Sbjct: 15428019 aggaaggcacgctatggtggcacgctcac 15428047 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 419 gaaggcacgctgtggtggcacgc 441 ||||||||||||||||||||||| Sbjct: 36619004 gaaggcacgctgtggtggcacgc 36619026 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 412 cggccaggaaggcacgctgtggtggcacgc 441 ||||||||| || ||||||||||||||||| Sbjct: 36628329 cggccaggaggggacgctgtggtggcacgc 36628358 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 caggaaggcacgctgtggtggcacgc 441 ||||| |||||||||||||||||||| Sbjct: 35396803 caggagggcacgctgtggtggcacgc 35396828 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 36230706 ggcacgctgtggtggcacgc 36230725 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 36172664 ggcacgctgtggtggcacgc 36172645 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 25436720 ggcacgctgtggtggcacgc 25436701
>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045D11 Length = 142320 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 417 aggaaggcacgctgtggtggcacgctcac 445 ||||||||||||| ||||||||||||||| Sbjct: 105560 aggaaggcacgctatggtggcacgctcac 105588
>emb|AM086215.1| Zea mays mRNA for putative laccase (lac3 gene) Length = 2310 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 417 aggaaggcacgctgtggtggcacgc 441 ||||||||||||||||||||||||| Sbjct: 611 aggaaggcacgctgtggtggcacgc 635
>ref|XM_463491.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 419 gaaggcacgctgtggtggcacgc 441 ||||||||||||||||||||||| Sbjct: 256 gaaggcacgctgtggtggcacgc 278
>gb|AF465470.1| Lolium perenne laccase LAC5-4 mRNA, complete cds Length = 2156 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 taccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgc 441 ||||| ||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 412 taccggttcaacgtcaccgggcaggagggcacgctgtggtggcacgc 458
>dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0414E03 Length = 139598 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 419 gaaggcacgctgtggtggcacgc 441 ||||||||||||||||||||||| Sbjct: 132379 gaaggcacgctgtggtggcacgc 132401
>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529H11 Length = 165969 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 419 gaaggcacgctgtggtggcacgc 441 ||||||||||||||||||||||| Sbjct: 92270 gaaggcacgctgtggtggcacgc 92292 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 412 cggccaggaaggcacgctgtggtggcacgc 441 ||||||||| || ||||||||||||||||| Sbjct: 101595 cggccaggaggggacgctgtggtggcacgc 101624
>dbj|AK109431.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-A04, full insert sequence Length = 2032 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 419 gaaggcacgctgtggtggcacgc 441 ||||||||||||||||||||||| Sbjct: 441 gaaggcacgctgtggtggcacgc 463
>dbj|AK065154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B17, full insert sequence Length = 1996 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 419 gaaggcacgctgtggtggcacgc 441 ||||||||||||||||||||||| Sbjct: 440 gaaggcacgctgtggtggcacgc 462
>dbj|AK061816.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B06, full insert sequence Length = 1978 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 419 gaaggcacgctgtggtggcacgc 441 ||||||||||||||||||||||| Sbjct: 445 gaaggcacgctgtggtggcacgc 467
>ref|NM_190623.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1665 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 412 cggccaggaaggcacgctgtggtggcacgc 441 ||||||||| || ||||||||||||||||| Sbjct: 345 cggccaggaggggacgctgtggtggcacgc 374
>ref|NM_190416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1704 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 caggaaggcacgctgtggtggcacgc 441 ||||| |||||||||||||||||||| Sbjct: 358 caggagggcacgctgtggtggcacgc 383
>gb|AC124686.3| Mus musculus BAC clone RP24-422F20 from chromosome 10, complete sequence Length = 194018 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 416 caggaaggcacgctgtggtggcacgc 441 ||||||||| |||||||||||||||| Sbjct: 37772 caggaaggctcgctgtggtggcacgc 37747
>gb|AF465466.1| Lolium perenne laccase LAC6-2 mRNA, partial cds Length = 1005 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 caggaaggcacgctgtggtggcacgc 441 ||||| |||||||||||||||||||| Sbjct: 115 caggagggcacgctgtggtggcacgc 140
>gb|AY897209.1| Zea mays laccase 1 (LAC1) gene, complete cds Length = 3771 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 caggaaggcacgctgtggtggcacgc 441 ||||| |||||||||||||||||||| Sbjct: 1638 caggagggcacgctgtggtggcacgc 1663
>gb|AY897208.1| Zea mays laccase 1 (LAC1) mRNA, complete cds Length = 2289 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 caggaaggcacgctgtggtggcacgc 441 ||||| |||||||||||||||||||| Sbjct: 439 caggagggcacgctgtggtggcacgc 464
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 caggaaggcacgctgtggtggcacgc 441 ||||| |||||||||||||||||||| Sbjct: 20752 caggagggcacgctgtggtggcacgc 20777
>dbj|AK071929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072C02, full insert sequence Length = 2023 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 caggaaggcacgctgtggtggcacgc 441 ||||| |||||||||||||||||||| Sbjct: 470 caggagggcacgctgtggtggcacgc 495
>dbj|AK066963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093P21, full insert sequence Length = 2095 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgctcacgt 447 |||||||||||||||||||| ||||| Sbjct: 432 ggcacgctgtggtggcacgcccacgt 457
>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence Length = 174449 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 caggaaggcacgctgtggtggcacgc 441 ||||||||| |||||||||||||||| Sbjct: 6945 caggaaggctcgctgtggtggcacgc 6970
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 113 gcgggcgacggcgacgcggcgc 134 |||||||||||||||||||||| Sbjct: 598849 gcgggcgacggcgacgcggcgc 598870 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 cggcgacgcggcgctcgtcga 141 ||||||||||||||||||||| Sbjct: 2659940 cggcgacgcggcgctcgtcga 2659920 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgacgcggcgctcgtcgagc 143 |||||||||||||||||||| Sbjct: 1666858 cgacgcggcgctcgtcgagc 1666839 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cgcggcgctcgtcgagcaca 146 |||||||||||||||||||| Sbjct: 1153020 cgcggcgctcgtcgagcaca 1153039
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151176 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Plus Query: 386 aacttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcac 439 |||| ||| ||||| ||| ||||| ||| ||||| |||||||||||||||||| Sbjct: 149384 aactacacttaccggttcaacgtcaccgggcaggagggcacgctgtggtggcac 149437 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 386 aacttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcacgc 441 |||| ||||||||| ||| ||||| || |||||| ||||| || ||||||||||| Sbjct: 58853 aactacacctaccgcttcaacgtcagcgaccaggagggcaccctatggtggcacgc 58908
>emb|AL844496.4|CNS08CAT Oryza sativa chromosome 12, . BAC OSJNBb0026N09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135462 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Plus Query: 386 aacttcacctaccgattcgacgtcgtcggccaggaaggcacgctgtggtggcac 439 |||| ||| ||||| ||| ||||| ||| ||||| |||||||||||||||||| Sbjct: 29524 aactacacttaccggttcaacgtcaccgggcaggagggcacgctgtggtggcac 29577
>ref|NM_196671.1| Oryza sativa (japonica cultivar-group) putative diphenol oxidase (OSJNBb0040I11.7), mRNA Length = 1404 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 417 aggaaggcacgctgtggtggcacgc 441 |||| |||||||||||||||||||| Sbjct: 179 aggagggcacgctgtggtggcacgc 203
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 cggcgacgcggcgctcgtcga 141 ||||||||||||||||||||| Sbjct: 2148214 cggcgacgcggcgctcgtcga 2148234
>emb|AL451140.15| Human DNA sequence from clone RP11-540H22 on chromosome 9 Contains the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 187738 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 tccccacatggaataacaattcact 305 ||||||| ||||||||||||||||| Sbjct: 24430 tccccacttggaataacaattcact 24454
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 cgacgcggcgctcgtcgagca 144 ||||||||||||||||||||| Sbjct: 3872239 cgacgcggcgctcgtcgagca 3872259
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gcgacggcgacgcggcgctcg 137 ||||||||||||||||||||| Sbjct: 27447 gcgacggcgacgcggcgctcg 27427
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 cggcgacgcggcgctcgtcga 141 ||||||||||||||||||||| Sbjct: 309836 cggcgacgcggcgctcgtcga 309856
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 cggcgacgcggcgctcgtcga 141 ||||||||||||||||||||| Sbjct: 2014804 cggcgacgcggcgctcgtcga 2014784
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 113 gcgggcgacggcgacgcggcgctcgtcga 141 ||||||| ||||||||||||| ||||||| Sbjct: 2807945 gcgggcggcggcgacgcggcggtcgtcga 2807973
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 417 aggaaggcacgctgtggtggcacgc 441 |||| |||||||||||||||||||| Sbjct: 54101 aggagggcacgctgtggtggcacgc 54125
>gb|AE005089.1| Halobacterium sp. NRC-1 section 120 of 170 of the complete genome Length = 11224 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cgacggcgacgcggcgctcgtcgag 142 |||||||||||| |||||||||||| Sbjct: 8181 cgacggcgacgccgcgctcgtcgag 8205
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 gcgggcgacggcgacgcggcgctcgtcgagcac 145 |||||||||||| |||| ||||||| ||||||| Sbjct: 103413 gcgggcgacggccacgccgcgctcgccgagcac 103445
>gb|U12757.1|APU12757 Acer pseudoplatanus laccase mRNA, complete cds Length = 2014 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 attcactggcatggagtgaagatgc 323 |||||||||||||||||||| |||| Sbjct: 308 attcactggcatggagtgaaaatgc 332
>ref|NM_119181.2| Arabidopsis thaliana ATP binding AT4G30350 mRNA, complete cds Length = 3236 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 catccatcctagaactagaa 40 |||||||||||||||||||| Sbjct: 2239 catccatcctagaactagaa 2220
>ref|XM_474334.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1623 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggcgacggcgacgcggcgct 135 |||||||||||||||||||| Sbjct: 199 ggcgacggcgacgcggcgct 218
>ref|NM_190569.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1692 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 397 ggcacgctgtggtggcacgc 416
>ref|NM_190556.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1734 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 373 ggcacgctgtggtggcacgc 392
>ref|NM_192960.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1689 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 370 ggcacgctgtggtggcacgc 389
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ggcgacgcggcgctcgtcga 141 |||||||||||||||||||| Sbjct: 532987 ggcgacgcggcgctcgtcga 532968
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 90647 ggcacgctgtggtggcacgc 90666 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 84576 ggcacgctgtggtggcacgc 84557
>gb|AC008140.11| Drosophila melanogaster clone BACR15J23, complete sequence Length = 140973 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 tgctgggcagatggagcggc 351 |||||||||||||||||||| Sbjct: 133086 tgctgggcagatggagcggc 133105
>ref|XM_426213.1| PREDICTED: Gallus gallus similar to growth/differentiation factor 16 precursor protein (LOC428655), mRNA Length = 1611 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gggcagatggagcggcgatg 355 |||||||||||||||||||| Sbjct: 1174 gggcagatggagcggcgatg 1193
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ggcgacgcggcgctcgtcga 141 |||||||||||||||||||| Sbjct: 3242091 ggcgacgcggcgctcgtcga 3242110
>gb|AC135104.22| Mus musculus strain C57BL/6J clone rp23-206l6, complete sequence Length = 198294 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atccatcctagaactagaag 41 |||||||||||||||||||| Sbjct: 8403 atccatcctagaactagaag 8422
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cggcgggcgacggcgacgcg 130 |||||||||||||||||||| Sbjct: 8302546 cggcgggcgacggcgacgcg 8302565
>gb|AC163038.5| Mus musculus BAC clone RP23-180A14 from chromosome 13, complete sequence Length = 213865 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cgggcgacggcgacgcggcg 133 |||||||||||||||||||| Sbjct: 47202 cgggcgacggcgacgcggcg 47183
>ref|XM_891442.2| PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein A0, transcript variant 2 (Hnrpa0), mRNA Length = 2683 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgggcgacggcgacgcggcg 133 |||||||||||||||||||| Sbjct: 187 cgggcgacggcgacgcggcg 206
>ref|XM_001001311.1| PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein A0 (Hnrpa0), mRNA Length = 1121 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgggcgacggcgacgcggcg 133 |||||||||||||||||||| Sbjct: 147 cgggcgacggcgacgcggcg 166
>gb|AC165251.2| Mus musculus BAC clone RP24-75C16 from chromosome 13, complete sequence Length = 207075 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgggcgacggcgacgcggcg 133 |||||||||||||||||||| Sbjct: 6709 cgggcgacggcgacgcggcg 6728
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ggcgacgcggcgctcgtcga 141 |||||||||||||||||||| Sbjct: 2971914 ggcgacgcggcgctcgtcga 2971933
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ggcgacggcgacgcggcgct 135 |||||||||||||||||||| Sbjct: 152881 ggcgacggcgacgcggcgct 152862
>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72 Length = 198924 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 catccatcctagaactagaa 40 |||||||||||||||||||| Sbjct: 189797 catccatcctagaactagaa 189778
>emb|BX085193.16| Zebrafish DNA sequence from clone DKEY-20F20 in linkage group 2, complete sequence Length = 246911 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 gctgttcatgtcatcaacaagtcc 283 |||| ||||||||||||||||||| Sbjct: 194558 gctgatcatgtcatcaacaagtcc 194581
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cgacggcgacgcggcgctcg 137 |||||||||||||||||||| Sbjct: 3542230 cgacggcgacgcggcgctcg 3542249
>gb|AF465468.1| Lolium perenne laccase LAC5-6 mRNA, complete cds Length = 2036 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 436 ggcacgctgtggtggcacgc 455
>gb|DQ314862.1| Streptomyces hygroscopicus strain NRRL 2388 hygromycin A biosynthetic gene cluster, complete sequence Length = 39151 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgacgtcgtcggccaggaag 422 |||||||||||||||||||| Sbjct: 22115 cgacgtcgtcggccaggaag 22096
>gb|AF132126.1|AF132126 Pinus taeda laccase (Lac8) mRNA, complete cds Length = 1924 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 aggcacgctgtggtggcacgctca 444 |||||| ||||||||||||||||| Sbjct: 456 aggcacactgtggtggcacgctca 479
>dbj|AK019388.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010025E17 product:Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0) homolog [Homo sapiens], full insert sequence Length = 1418 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgggcgacggcgacgcggcg 133 |||||||||||||||||||| Sbjct: 212 cgggcgacggcgacgcggcg 231
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ggcgacggcgacgcggcgct 135 |||||||||||||||||||| Sbjct: 34535397 ggcgacggcgacgcggcgct 34535378
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 22389012 ggcacgctgtggtggcacgc 22389031 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 22382941 ggcacgctgtggtggcacgc 22382922
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cggcgggcgacggcgacgcg 130 |||||||||||||||||||| Sbjct: 8300381 cggcgggcgacggcgacgcg 8300400
>gb|AC008089.3|AC008089 Drosophila melanogaster, chromosome 3R, region 86C-86C, BAC clone BACR29B06, complete sequence Length = 179669 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 tgctgggcagatggagcggc 351 |||||||||||||||||||| Sbjct: 134684 tgctgggcagatggagcggc 134665
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cggcgggcgacggcgacgcg 130 |||||||||||||||||||| Sbjct: 39802 cggcgggcgacggcgacgcg 39821
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 107719 ggcacgctgtggtggcacgc 107738 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 49677 ggcacgctgtggtggcacgc 49658
>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0663E10 Length = 162297 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 126720 ggcacgctgtggtggcacgc 126701
>gb|AE004976.1| Halobacterium sp. NRC-1 section 7 of 170 of the complete genome Length = 11723 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 gcggcgggcgacggcgacgcggcgctcg 137 ||||||||||||| |||||||| ||||| Sbjct: 10093 gcggcgggcgacgccgacgcggggctcg 10066
>gb|AE005160.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 21 of 32 of the complete genome Length = 12314 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ggcgggcgacggcgacgcgg 131 |||||||||||||||||||| Sbjct: 8807 ggcgggcgacggcgacgcgg 8788
>dbj|AB083127.1| Rhus vernicifera lac2 mRNA for laccase2, partial cds Length = 1593 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 attcactggcatggagtgaa 318 |||||||||||||||||||| Sbjct: 172 attcactggcatggagtgaa 191
>dbj|AK110865.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-D12, full insert sequence Length = 1385 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cggcgggcgacggcgacgcg 130 |||||||||||||||||||| Sbjct: 1008 cggcgggcgacggcgacgcg 1027
>dbj|AK066513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068J22, full insert sequence Length = 2212 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 454 ggcacgctgtggtggcacgc 473
>dbj|AK068047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B16, full insert sequence Length = 2161 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 439 ggcacgctgtggtggcacgc 458
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 cggcgggcgacggcgacgcggcgc 134 |||| ||||||||||||||||||| Sbjct: 306375 cggccggcgacggcgacgcggcgc 306352
>emb|BX649578.14| Zebrafish DNA sequence from clone CH211-196L7 in linkage group 18, complete sequence Length = 211922 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tggcagccatggcggtcctc 79 |||||||||||||||||||| Sbjct: 135407 tggcagccatggcggtcctc 135426
>gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23 Length = 134784 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 catccatcctagaactagaa 40 |||||||||||||||||||| Sbjct: 105444 catccatcctagaactagaa 105463
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete sequence Length = 104146 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ggcgacggcgacgcggcgct 135 |||||||||||||||||||| Sbjct: 71903 ggcgacggcgacgcggcgct 71884
>gb|AE003688.3| Drosophila melanogaster chromosome 3R, section 26 of 118 of the complete sequence Length = 225594 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 tgctgggcagatggagcggc 351 |||||||||||||||||||| Sbjct: 107006 tgctgggcagatggagcggc 106987
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 cggcgacgcggcgctcgtcgagcacacc 148 ||||||||||||||| || ||||||||| Sbjct: 646604 cggcgacgcggcgctggtggagcacacc 646631
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccgattcgacgtcgtcggcc 416 |||||||||||||||||||| Sbjct: 2138216 ccgattcgacgtcgtcggcc 2138235
>emb|AM086217.1| Zea mays mRNA for putative laccase (lac5 gene) Length = 2044 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 459 ggcacgctgtggtggcacgc 478
>emb|AM086216.1| Zea mays mRNA for putative laccase (lac4 gene) Length = 2192 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ggcacgctgtggtggcacgc 441 |||||||||||||||||||| Sbjct: 547 ggcacgctgtggtggcacgc 566
>gb|AC168068.3| Mus musculus BAC clone RP23-99G15 from chromosome 8, complete sequence Length = 237728 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atccatcctagaactagaag 41 |||||||||||||||||||| Sbjct: 164508 atccatcctagaactagaag 164527
>dbj|AB062449.2| Rhus vernicifera mRNA for laccase, partial cds Length = 1602 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 attcactggcatggagtgaa 318 |||||||||||||||||||| Sbjct: 172 attcactggcatggagtgaa 191
>emb|AL627312.12| Mouse DNA sequence from clone RP23-276H1 on chromosome 11, complete sequence Length = 178178 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 atccatcctagaactagaag 41 |||||||||||||||||||| Sbjct: 10593 atccatcctagaactagaag 10574 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,351,048 Number of Sequences: 3902068 Number of extensions: 3351048 Number of successful extensions: 62146 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59222 Number of HSP's gapped (non-prelim): 2923 length of query: 530 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 507 effective length of database: 17,143,297,704 effective search space: 8691651935928 effective search space used: 8691651935928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)