ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart19h10 |
|---|---|
| Clone Library Name | barley_pub |
>YPTV3_VOLCA (P36862) GTP-binding protein yptV3| Length = 203 Score = 174 bits (441), Expect = 1e-43 Identities = 85/151 (56%), Positives = 113/151 (74%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 S+D +FKVLL+GDS VGKS +L F S ++ + TIGVDFK+K+LT K+ KLTIW Sbjct: 5 SHDYTFKVLLVGDSGVGKSCILTRFTSGI-FEESTTSTIGVDFKVKYLTADGKRCKLTIW 63 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRT+TSSYYRGA GII VYDVT+R +F +L W +E +++ST + +KM+V Sbjct: 64 DTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVA 123 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK+D R V++EEG FA++ GCLF+E+S Sbjct: 124 NKVDLSAQRQVSSEEGHDFARRHGCLFVETS 154
>RAB18_BRARE (Q6DHC1) Ras-related protein Rab-18| Length = 205 Score = 159 bits (403), Expect = 4e-39 Identities = 82/147 (55%), Positives = 107/147 (72%) Frame = +3 Query: 111 SFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAG 290 + K+L+IG+S VGKSSLL+ F D +++ TIGVDFK+K + + + KL IWDTAG Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDT-FDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAG 66 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QERFRT+T SYYRGA G+ILVYDVTKR +FT L + W E+E + T + VKMLVGNK+D Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKID 125 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 KD +R V EGL FA++ LF+E+S Sbjct: 126 KD-NREVDRNEGLKFARKHSMLFIEAS 151
>RAB18_CHICK (Q5ZLG1) Ras-related protein Rab-18| Length = 206 Score = 159 bits (402), Expect = 5e-39 Identities = 83/147 (56%), Positives = 107/147 (72%) Frame = +3 Query: 111 SFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAG 290 + K+L+IG+S VGKSSLL+ F D +++ TIGVDFK+K ++V K KL IWDTAG Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDT-FDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QERFRT+T SYYRGA G+ILVYDVT+R +F L D W E+E + T + VKMLVGNK+D Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKID 125 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 K E+R V EGL FA++ LF+E+S Sbjct: 126 K-ENREVDRNEGLKFARKHSMLFIEAS 151
>RB18A_LYMST (Q05976) Ras-related protein Rab-18A| Length = 202 Score = 157 bits (397), Expect = 2e-38 Identities = 84/147 (57%), Positives = 106/147 (72%) Frame = +3 Query: 111 SFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAG 290 + K+L+IG+S VGKSSLL+ F D + + TIGVDFK+K LTV K KL IWDTAG Sbjct: 9 TLKILIIGESGVGKSSLLLRFTEDT-FDPEQAATIGVDFKVKTLTVEGNKTKLAIWDTAG 67 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QERFRT+T SYYRGA G+ILVYDV+ +QSF L D W E+E ST + VKMLVGNK+D Sbjct: 68 QERFRTLTPSYYRGAQGVILVYDVSSKQSFNKL-DAWLNELETFSTKHDMVKMLVGNKID 126 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 + + VT +EGL FA++ LF+E+S Sbjct: 127 R-ANHEVTKDEGLKFARKHHMLFIEAS 152
>RAB18_RAT (Q5EB77) Ras-related protein Rab-18| Length = 206 Score = 157 bits (397), Expect = 2e-38 Identities = 82/147 (55%), Positives = 106/147 (72%) Frame = +3 Query: 111 SFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAG 290 + K+L+IG+S VGKSSLL+ F D +++ TIGVDFK+K ++V K KL IWDTAG Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDT-FDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QERFRT+T SYYRGA G+ILVYDVT+R +F L D W E+E + T + V MLVGNK+D Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKID 125 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 K E+R V EGL FA++ LF+E+S Sbjct: 126 K-ENREVDRNEGLKFARKHSMLFIEAS 151
>RAB18_PONPY (Q5R5H5) Ras-related protein Rab-18| Length = 206 Score = 157 bits (397), Expect = 2e-38 Identities = 82/147 (55%), Positives = 106/147 (72%) Frame = +3 Query: 111 SFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAG 290 + K+L+IG+S VGKSSLL+ F D +++ TIGVDFK+K ++V K KL IWDTAG Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDT-FDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QERFRT+T SYYRGA G+ILVYDVT+R +F L D W E+E + T + V MLVGNK+D Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKID 125 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 K E+R V EGL FA++ LF+E+S Sbjct: 126 K-ENREVDRNEGLKFARKHSMLFIEAS 151
>RAB18_MOUSE (P35293) Ras-related protein Rab-18| Length = 206 Score = 157 bits (397), Expect = 2e-38 Identities = 82/147 (55%), Positives = 106/147 (72%) Frame = +3 Query: 111 SFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAG 290 + K+L+IG+S VGKSSLL+ F D +++ TIGVDFK+K ++V K KL IWDTAG Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDT-FDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QERFRT+T SYYRGA G+ILVYDVT+R +F L D W E+E + T + V MLVGNK+D Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKID 125 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 K E+R V EGL FA++ LF+E+S Sbjct: 126 K-ENREVDRNEGLKFARKHSMLFIEAS 151
>RAB18_HUMAN (Q9NP72) Ras-related protein Rab-18| Length = 206 Score = 157 bits (397), Expect = 2e-38 Identities = 82/147 (55%), Positives = 106/147 (72%) Frame = +3 Query: 111 SFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAG 290 + K+L+IG+S VGKSSLL+ F D +++ TIGVDFK+K ++V K KL IWDTAG Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDT-FDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QERFRT+T SYYRGA G+ILVYDVT+R +F L D W E+E + T + V MLVGNK+D Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKID 125 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 K E+R V EGL FA++ LF+E+S Sbjct: 126 K-ENREVDRNEGLKFARKHSMLFIEAS 151
>SEC4_YEAST (P07560) Ras-related protein SEC4 (Suppressor of RHO3 protein 6)| Length = 215 Score = 154 bits (389), Expect = 2e-37 Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 4/157 (2%) Frame = +3 Query: 93 GSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKK 260 G SYD K+LLIGDS VGKS LLV FV +D +P TIG+DFKIK + + KK Sbjct: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFV-----EDKFNPSFITTIGIDFKIKTVDINGKK 68 Query: 261 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC 440 +KL +WDTAGQERFRTIT++YYRGA GIILVYDVT ++FTN+ W K + H+ N E Sbjct: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-NDEA 126 Query: 441 VKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +LVGNK D E R+VT ++G A A++ G F+ESS Sbjct: 127 QLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESS 162
>SEC4_CANGA (O42819) Ras-related protein SEC4| Length = 215 Score = 153 bits (386), Expect = 4e-37 Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 4/157 (2%) Frame = +3 Query: 93 GSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKK 260 G SYD K+LLIGDS VGKS LLV FV +D +P TIG+DFKIK + + KK Sbjct: 14 GKSYDSIMKILLIGDSGVGKSCLLVRFV-----EDKFNPSFITTIGIDFKIKTVDINGKK 68 Query: 261 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC 440 +KL +WDTAGQERFRTIT++YYRGA GIILVYDVT ++F N+ W K + H+ N E Sbjct: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQ-WFKTVNEHA-NDEA 126 Query: 441 VKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +LVGNK D D R+VT E+G A A++ G F+ESS Sbjct: 127 QLLLVGNKSDMD-TRVVTYEQGEALAKELGLPFIESS 162
>YPTM1_MAIZE (P16976) GTP-binding protein YPTM1| Length = 208 Score = 153 bits (386), Expect = 4e-37 Identities = 85/152 (55%), Positives = 106/152 (69%) Frame = +3 Query: 96 SSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTI 275 + +D FK+LLIGDS+VGKS L+ F + D IS TIGVDFKI+ + V K +KL I Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYIS-TIGVDFKIRTVEVEGKTVKLQI 61 Query: 276 WDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLV 455 WDTAGQERFRTITSSYYRGAHGII+VYD+T +SF N+ W EI+ ++ N K+LV Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRKLLV 119 Query: 456 GNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 GNK D E+R V T A+AQ+ G FLE+S Sbjct: 120 GNKCDLAENRAVDTSVAQAYAQEVGIPFLETS 151
>RAB1_THEPA (Q9TVU5) Ras-related protein Rab-1 (Small GTP-binding protein rab1)| (TpRab1) Length = 220 Score = 152 bits (385), Expect = 5e-37 Identities = 76/150 (50%), Positives = 108/150 (72%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+++IGDS GKSSLL+ F ++ +S TIGVDFKIK + + + +KL IWD Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMS-TIGVDFKIKTVKIDNTTIKLQIWD 62 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITS+YYRGAHGII VYDVT + SF ++ + W ++I+ ++T+ C K+L+GN Sbjct: 63 TAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+D E R+V+ +E A+Q ++E+S Sbjct: 122 KIDLAESRVVSADEAKHVAEQNNMNYIEAS 151
>YPTM2_MAIZE (Q05737) GTP-binding protein YPTM2| Length = 203 Score = 152 bits (384), Expect = 6e-37 Identities = 84/150 (56%), Positives = 106/150 (70%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F + D IS TIGVDFKI+ + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYIS-TIGVDFKIRTVEQDGKTIKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W EI+ ++++ K+LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D +++V TE AFA + G F+E+S Sbjct: 122 KSDLTANKVVATETAKAFADEMGIPFMETS 151
>RIC1_ORYSA (P40392) Ras-related protein RIC1| Length = 202 Score = 152 bits (384), Expect = 6e-37 Identities = 85/150 (56%), Positives = 107/150 (71%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F + + IS TIGVDFKI+ + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYIS-TIGVDFKIRTVEQDGKTIKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W EI+ ++ ++ K+LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-SENVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D E+R+V+ E G A A + G FLE+S Sbjct: 122 KCDLAENRVVSYEAGKALADEIGIPFLETS 151
>RAB26_RAT (P51156) Ras-related protein Rab-26| Length = 257 Score = 152 bits (383), Expect = 8e-37 Identities = 79/181 (43%), Positives = 115/181 (63%) Frame = +3 Query: 9 HPTNPPARTRAIRSPPPRPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAP 188 HP A + PP+ G ++G T G YD +FKV+L+GDS VGK+ LLV F A Sbjct: 31 HPRTARPGPEAPPNGPPQSGRPSLGGT-GDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAF 89 Query: 189 TDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTK 368 T+G+DF+ K L V K+KL IWDTAGQERFR++T +YYR AH ++L+YD+T Sbjct: 90 LAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITN 149 Query: 369 RQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLES 548 + SF N+ W EI+ ++ ++ V ML+GNK+D ++R+V E+G A++ G F+E+ Sbjct: 150 KDSFDNI-QAWLTEIQEYA-QQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMET 207 Query: 549 S 551 S Sbjct: 208 S 208
>YPT1_PHYIN (Q01890) Ras-like GTP-binding protein YPT1| Length = 201 Score = 151 bits (381), Expect = 1e-36 Identities = 84/150 (56%), Positives = 105/150 (70%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTIKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W EI+ ++ + K+LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D R+V+T+ FA+ G FLE+S Sbjct: 122 KSDLTAKRVVSTDAAKEFAESLGIEFLETS 151
>RAB26_MOUSE (Q504M8) Ras-related protein Rab-26| Length = 260 Score = 150 bits (380), Expect = 2e-36 Identities = 80/181 (44%), Positives = 115/181 (63%) Frame = +3 Query: 9 HPTNPPARTRAIRSPPPRPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAP 188 HP A + PP+ ++GST G YD +FKV+L+GDS VGK+ LLV F A Sbjct: 34 HPRTVRPGPEAPPNGPPQSIRPSLGST-GDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAF 92 Query: 189 TDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTK 368 T+G+DF+ K L V K+KL IWDTAGQERFR++T +YYR AH ++L+YD+T Sbjct: 93 LAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITN 152 Query: 369 RQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLES 548 + SF N+ W EI+ ++ ++ V ML+GNK+D +DR+V E+G A++ G F+E+ Sbjct: 153 KDSFDNI-QAWLTEIQEYA-QQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMET 210 Query: 549 S 551 S Sbjct: 211 S 211
>RAB1_THEAN (Q4UB16) Ras-related protein Rab-1 (Small GTP-binding protein rab1)| Length = 220 Score = 150 bits (379), Expect = 2e-36 Identities = 75/150 (50%), Positives = 107/150 (71%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+++IGDS GKSSLL+ F ++ +S TIGVDFKIK + + + +KL IWD Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMS-TIGVDFKIKTVKIDNTTIKLQIWD 62 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITS+YYRGAHGII VYDVT + SF ++ + W ++I+ ++T+ C K+L+GN Sbjct: 63 TAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+D + R+V +E A+Q ++E+S Sbjct: 122 KIDLVDSRVVLADEAKHVAEQNNMNYIEAS 151
>ARA5_ARATH (P28188) Ras-related protein ARA-5| Length = 258 Score = 150 bits (379), Expect = 2e-36 Identities = 85/164 (51%), Positives = 108/164 (65%) Frame = +3 Query: 60 RPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKF 239 R ++ T YD FK+LLIGDS VGKS LL+ F + + IS TIGVDFKI+ Sbjct: 46 RCSSSHRSKTMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYIS-TIGVDFKIRT 104 Query: 240 LTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIEL 419 + K +KL IWDTAGQERFRTITSSYYRGAHGII+VYDVT +SF N+ W EI+ Sbjct: 105 VEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDR 163 Query: 420 HSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ++++ K+LVGNK D E+R + E AFA + G F+E+S Sbjct: 164 YASD-NVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETS 206
>RYL1_YARLI (P41924) Ras-like GTP-binding protein RYL1| Length = 203 Score = 149 bits (376), Expect = 5e-36 Identities = 79/151 (52%), Positives = 110/151 (72%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD K+LLIGDS VGKS LL+ F T I+ TIG+DFKI+ + +G++++KL +W Sbjct: 7 TYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFIT-TIGIDFKIRTIDIGNQRVKLQVW 65 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+LVYDVT +SF N+ + W + ++ ++ N+ +LVG Sbjct: 66 DTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIEN-WYQNVQSYA-NEGVELILVG 123 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D DE R+V+TE+G A A + G FLE+S Sbjct: 124 NKCDLDEKRVVSTEQGQALADKFGIPFLEAS 154
>RAB1A_LYMST (Q05974) Ras-related protein Rab-1A| Length = 205 Score = 149 bits (376), Expect = 5e-36 Identities = 84/156 (53%), Positives = 106/156 (67%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 ST YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K + Sbjct: 2 STMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTI 60 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W +EI+ ++ ++ Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYA-SENVN 118 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+LVGNK D ++V +A Q G FLE+S Sbjct: 119 KLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETS 154
>YPTV1_VOLCA (P31584) GTP-binding protein yptV1| Length = 203 Score = 148 bits (373), Expect = 1e-35 Identities = 83/150 (55%), Positives = 105/150 (70%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTVELDGKVIKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W EI+ ++ ++ K+LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLAEIDRYA-SENVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D ++V + AFA + G FLE+S Sbjct: 122 KSDLTGKKVVDYQAAKAFADEIGIPFLETS 151
>YPTC1_CHLRE (Q39571) GTP-binding protein YPTC1| Length = 203 Score = 148 bits (373), Expect = 1e-35 Identities = 83/150 (55%), Positives = 104/150 (69%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTVELDGKVIKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W EI+ ++ ++ K+LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-SENVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D ++V AFA + G FLE+S Sbjct: 122 KSDLTSKKVVEYSVAKAFADEIGIPFLETS 151
>RAB18_CAEBR (P90726) Ras-related protein Rab-18| Length = 202 Score = 148 bits (373), Expect = 1e-35 Identities = 79/156 (50%), Positives = 106/156 (67%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 S SS + K+L+IG+S VGKSSL++ FV D + + TIGVDF++ +T+ ++ Sbjct: 2 SDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDV-FDPEQAATIGVDFRVTSMTIDGNRV 60 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFRT+T SYYRGA G+I VYDVT R SF L W E++ + TN + Sbjct: 61 KLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKH-WMTEVDTYCTNDNVI 119 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 KM+V NK+D +R VT EEGL FA++ LF+E+S Sbjct: 120 KMMVANKIDM-PNRTVTREEGLKFAKRHRTLFIEAS 154
>RAB18_CAEEL (Q8MXS1) Ras-related protein Rab-18| Length = 203 Score = 147 bits (372), Expect = 1e-35 Identities = 78/156 (50%), Positives = 108/156 (69%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 S SS + K+L+IG+S VGKSSL++ FV D + + TIGVDF++ + + ++ Sbjct: 2 SDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDV-FDPEQAATIGVDFRVTSMAIDGNRV 60 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFRT+T SYYRGA G+I VYDVT R SF L + W +E++ + TN + Sbjct: 61 KLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKL-NHWMQEVDTYCTNDNII 119 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 KM+V NK+D +R+VT EEGL FA++ LF+E+S Sbjct: 120 KMMVANKIDM-PNRVVTREEGLKFAKRHRTLFIEAS 154
>RAB1A_RAT (Q6NYB7) Ras-related protein Rab-1A| Length = 204 Score = 147 bits (371), Expect = 2e-35 Identities = 83/156 (53%), Positives = 105/156 (67%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 S+ YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K + Sbjct: 1 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTI 59 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W +EI+ ++ ++ Sbjct: 60 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYA-SENVN 117 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+LVGNK D ++V FA G FLE+S Sbjct: 118 KLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETS 153
>RAB1A_MOUSE (P62821) Ras-related protein Rab-1A (YPT1-related protein)| Length = 204 Score = 147 bits (371), Expect = 2e-35 Identities = 83/156 (53%), Positives = 105/156 (67%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 S+ YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K + Sbjct: 1 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTI 59 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W +EI+ ++ ++ Sbjct: 60 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYA-SENVN 117 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+LVGNK D ++V FA G FLE+S Sbjct: 118 KLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETS 153
>RAB1A_HUMAN (P62820) Ras-related protein Rab-1A (YPT1-related protein)| Length = 204 Score = 147 bits (371), Expect = 2e-35 Identities = 83/156 (53%), Positives = 105/156 (67%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 S+ YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K + Sbjct: 1 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTI 59 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W +EI+ ++ ++ Sbjct: 60 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYA-SENVN 117 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+LVGNK D ++V FA G FLE+S Sbjct: 118 KLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETS 153
>RAB1A_CANFA (P62822) Ras-related protein Rab-1A| Length = 204 Score = 147 bits (371), Expect = 2e-35 Identities = 83/156 (53%), Positives = 105/156 (67%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 S+ YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K + Sbjct: 1 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTI 59 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W +EI+ ++ ++ Sbjct: 60 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYA-SENVN 117 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+LVGNK D ++V FA G FLE+S Sbjct: 118 KLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETS 153
>YPT2_SCHPO (P17609) GTP-binding protein ypt2 (SEC4 homolog)| Length = 200 Score = 147 bits (370), Expect = 3e-35 Identities = 78/151 (51%), Positives = 107/151 (70%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 SYD K+LLIGDS VGKS LL+ F + T I+ TIG+DFKI+ + + K++KL IW Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFIT-TIGIDFKIRTIELDGKRIKLQIW 63 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+L+YDVT ++SF N+ W +E H+ ++ K+L+G Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVR-TWFSNVEQHA-SENVYKILIG 121 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R V+ E+G A A + G FLE+S Sbjct: 122 NKCDCEDQRQVSFEQGQALADELGVKFLEAS 152
>YPT1_YEAST (P01123) GTP-binding protein YPT1 (Rab GTPase YPT1) (Transport| GTPase YPT1) (Protein YP2) Length = 206 Score = 147 bits (370), Expect = 3e-35 Identities = 84/152 (55%), Positives = 107/152 (70%) Frame = +3 Query: 96 SSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTI 275 S YD FK+LLIG+S VGKS LL+ F T+D IS TIGVDFKIK + + K +KL I Sbjct: 3 SEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYIS-TIGVDFKIKTVELDGKTVKLQI 61 Query: 276 WDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLV 455 WDTAGQERFRTITSSYYRG+HGII+VYDVT ++SF N +W +EI+ ++T+ +K+LV Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATS-TVLKLLV 119 Query: 456 GNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 GNK D + R+V + FA FLE+S Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMPFLETS 151
>RAB1_DISOM (P22125) Ras-related protein ORAB-1| Length = 202 Score = 146 bits (369), Expect = 3e-35 Identities = 82/150 (54%), Positives = 103/150 (68%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTIKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGII+VYDVT ++SF N+ W +EI+ ++ ++ K+LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYA-SENVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D ++V FA G FLE+S Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETS 151
>RAB1B_MOUSE (Q9D1G1) Ras-related protein Rab-1B| Length = 201 Score = 145 bits (367), Expect = 6e-35 Identities = 81/150 (54%), Positives = 103/150 (68%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTIKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGII+VYDVT ++S+ N+ W +EI+ ++ ++ K+LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYA-SENVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D ++V FA G FLE+S Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETS 151
>RAB1B_HUMAN (Q9H0U4) Ras-related protein Rab-1B| Length = 201 Score = 145 bits (367), Expect = 6e-35 Identities = 81/150 (54%), Positives = 103/150 (68%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTIKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGII+VYDVT ++S+ N+ W +EI+ ++ ++ K+LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYA-SENVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D ++V FA G FLE+S Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETS 151
>SAS1_DICDI (P20790) GTP-binding protein SAS1| Length = 208 Score = 145 bits (367), Expect = 6e-35 Identities = 79/152 (51%), Positives = 107/152 (70%) Frame = +3 Query: 96 SSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTI 275 ++YD K+LLIGDS VGKS LL+ F + T I+ TIG+DFKI+ + + K++KL I Sbjct: 10 AAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFIT-TIGIDFKIRTIELEGKRIKLQI 68 Query: 276 WDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLV 455 WDTAGQERFRTIT++YYRGA GI+LVYDVT +SF N+ + W + IE H+T+ KML+ Sbjct: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHATD-SVNKMLI 126 Query: 456 GNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 GNK D E ++V + G + A + G FLE+S Sbjct: 127 GNKCDMAEKKVVDSSRGKSLADEYGIKFLETS 158
>RAB1A_PIG (Q52NJ2) Ras-related protein Rab-1A| Length = 204 Score = 145 bits (367), Expect = 6e-35 Identities = 83/156 (53%), Positives = 104/156 (66%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 S+ YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K + Sbjct: 1 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTI 59 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFRTITSSYYRGAHGII+VYDVT + SF N+ W +EI+ ++ ++ Sbjct: 60 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQ-WLQEIDRYA-SENVN 117 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+LVGNK D ++V FA G FLE+S Sbjct: 118 KLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETS 153
>RAB1B_RAT (P10536) Ras-related protein Rab-1B| Length = 201 Score = 145 bits (366), Expect = 7e-35 Identities = 80/150 (53%), Positives = 103/150 (68%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTIKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRT+TSSYYRGAHGII+VYDVT ++S+ N+ W +EI+ ++ ++ K+LVGN Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYA-SENVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D ++V FA G FLE+S Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETS 151
>RAB3_CAEEL (Q94986) Ras-related protein Rab-3| Length = 219 Score = 145 bits (366), Expect = 7e-35 Identities = 77/165 (46%), Positives = 111/165 (67%), Gaps = 3/165 (1%) Frame = +3 Query: 66 GAAAMGSTPGS---SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIK 236 G G+TPG ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K Sbjct: 4 GGQPQGATPGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVS-TVGIDFKVK 62 Query: 237 FLTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIE 416 + GDK++KL IWDTAGQER+RTIT++YYRGA G IL+YD+T +SF ++ D W +I+ Sbjct: 63 TVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD-WCTQIK 121 Query: 417 LHSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +S V +LVGNK D D +R+V+ + G A Q G F E+S Sbjct: 122 TYSWENAQV-VLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETS 165
>YPTV2_VOLCA (P36861) GTP-binding protein yptV2| Length = 217 Score = 145 bits (366), Expect = 7e-35 Identities = 86/160 (53%), Positives = 106/160 (66%), Gaps = 2/160 (1%) Frame = +3 Query: 78 MGSTPGS-SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGD 254 M PG YD K+LL+GDS VGKS LL+ F T I+ TIG+DFKIK + V Sbjct: 1 MARIPGRPDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFIT-TIGIDFKIKKVDVDG 59 Query: 255 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNK 434 K +KL IWDTAGQERFRTITS+YYRGA GIILVYD+T SF N+ + W + IE H+++ Sbjct: 60 KLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRN-WMRNIEQHASD- 117 Query: 435 ECVKMLVGNKLDKDED-RMVTTEEGLAFAQQCGCLFLESS 551 K+LVGNKLD ED R+V+ G A A + G F E+S Sbjct: 118 NVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETS 157
>ARA3_ARATH (P28186) Ras-related protein ARA-3| Length = 216 Score = 145 bits (365), Expect = 1e-34 Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 1/161 (0%) Frame = +3 Query: 72 AAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVG 251 AA + + YD K+LLIGDS VGKS LL+ F + T I+ TIG+DFKI+ + + Sbjct: 2 AAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFIT-TIGIDFKIRTIELD 60 Query: 252 DKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 431 K++KL IWDTAGQERFRTIT++YYRGA GI+LVYDVT SF N+ + W + IE H+++ Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD 119 Query: 432 KECVKMLVGNKLDKDED-RMVTTEEGLAFAQQCGCLFLESS 551 K+LVGNK D DE R V T +G A A + G F E+S Sbjct: 120 -NVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETS 159
>RB1BV_BETVU (Q39433) Ras-related protein RAB1BV| Length = 215 Score = 145 bits (365), Expect = 1e-34 Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 1/161 (0%) Frame = +3 Query: 72 AAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVG 251 AA + + YD K+LLIGDS VGKS LL+ F + T I+ TIG+DFKI+ + + Sbjct: 2 AAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFIT-TIGIDFKIRTIELD 60 Query: 252 DKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 431 K++KL IWDTAGQERFRTIT++YYRGA GI+LVYDVT SF N+ + W + IE H+++ Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD 119 Query: 432 KECVKMLVGNKLDKDED-RMVTTEEGLAFAQQCGCLFLESS 551 K+LVGNK D DE R V T +G A A + G F E+S Sbjct: 120 -NVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETS 159
>YPT1_NEUCR (P33723) GTP-binding protein ypt1| Length = 203 Score = 144 bits (363), Expect = 2e-34 Identities = 82/150 (54%), Positives = 101/150 (67%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTIELDGKTVKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGI +VYDVT SF N+ W +EI+ ++T + K+LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D + ++V FA G FLE+S Sbjct: 122 KSDMTDKKVVEYTVAKEFADSLGIPFLETS 151
>RAB35_RAT (Q5U316) Ras-related protein Rab-35| Length = 201 Score = 143 bits (361), Expect = 3e-34 Identities = 80/153 (52%), Positives = 102/153 (66%), Gaps = 3/153 (1%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+L+IGDS VGKSSLL+ F + I+ TIGVDFKI+ + + +K+KL IWD Sbjct: 5 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYIT-TIGVDFKIRTVEINGEKVKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC---VKML 452 TAGQERFRTITS+YYRG HG+I+VYDVT +SF N+ W LH N+ C ++L Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKR-W-----LHEINQNCDDVCRIL 117 Query: 453 VGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 VGNK D E ++V TE+ FA Q G E+S Sbjct: 118 VGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 150
>RAB35_MOUSE (Q6PHN9) Ras-related protein Rab-35| Length = 201 Score = 143 bits (361), Expect = 3e-34 Identities = 80/153 (52%), Positives = 102/153 (66%), Gaps = 3/153 (1%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+L+IGDS VGKSSLL+ F + I+ TIGVDFKI+ + + +K+KL IWD Sbjct: 5 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYIT-TIGVDFKIRTVEINGEKVKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC---VKML 452 TAGQERFRTITS+YYRG HG+I+VYDVT +SF N+ W LH N+ C ++L Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKR-W-----LHEINQNCDDVCRIL 117 Query: 453 VGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 VGNK D E ++V TE+ FA Q G E+S Sbjct: 118 VGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 150
>RAB35_HUMAN (Q15286) Ras-related protein Rab-35 (Rab-1C) (GTP-binding protein| RAY) Length = 201 Score = 143 bits (361), Expect = 3e-34 Identities = 80/153 (52%), Positives = 102/153 (66%), Gaps = 3/153 (1%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+L+IGDS VGKSSLL+ F + I+ TIGVDFKI+ + + +K+KL IWD Sbjct: 5 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYIT-TIGVDFKIRTVEINGEKVKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC---VKML 452 TAGQERFRTITS+YYRG HG+I+VYDVT +SF N+ W LH N+ C ++L Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKR-W-----LHEINQNCDDVCRIL 117 Query: 453 VGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 VGNK D E ++V TE+ FA Q G E+S Sbjct: 118 VGNKNDDPERKVVETEDAYKFAGQMGIQLFETS 150
>RAB8B_RAT (P70550) Ras-related protein Rab-8B| Length = 207 Score = 143 bits (361), Expect = 3e-34 Identities = 78/151 (51%), Positives = 105/151 (69%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ LL F A IS TIG+DFKI+ + + KK+KL IW Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFIS-TIGIDFKIRTIELDGKKIKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+LVYD+T +SF N+ + W + IE H+++ + +M++G Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R V+ E G A G FLE+S Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
>RAB8B_MOUSE (P61028) Ras-related protein Rab-8B| Length = 207 Score = 143 bits (361), Expect = 3e-34 Identities = 78/151 (51%), Positives = 105/151 (69%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ LL F A IS TIG+DFKI+ + + KK+KL IW Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFIS-TIGIDFKIRTIELDGKKIKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+LVYD+T +SF N+ + W + IE H+++ + +M++G Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R V+ E G A G FLE+S Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
>RAB8B_HUMAN (Q92930) Ras-related protein Rab-8B| Length = 207 Score = 143 bits (361), Expect = 3e-34 Identities = 78/151 (51%), Positives = 105/151 (69%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ LL F A IS TIG+DFKI+ + + KK+KL IW Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFIS-TIGIDFKIRTIELDGKKIKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+LVYD+T +SF N+ + W + IE H+++ + +M++G Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R V+ E G A G FLE+S Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
>SAS2_DICDI (P20791) GTP-binding protein SAS2| Length = 203 Score = 143 bits (360), Expect = 4e-34 Identities = 77/152 (50%), Positives = 107/152 (70%) Frame = +3 Query: 96 SSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTI 275 ++YD K+LLIGDS VGKS LL+ F + T I+ TIG+DFKI+ + + K++KL I Sbjct: 10 AAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIA-TIGIDFKIRTIELEGKRIKLQI 68 Query: 276 WDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLV 455 WDTAGQERFRTIT++YYRGA GI+LVYDVT +SF ++ + W + IE H+++ KML+ Sbjct: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRN-WIRNIEQHASD-SVNKMLI 126 Query: 456 GNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 GNK D E ++V + G + A + G FLE+S Sbjct: 127 GNKCDMTEKKVVDSSRGKSLADEYGIKFLETS 158
>RAB10_MOUSE (P61027) Ras-related protein Rab-10| Length = 200 Score = 142 bits (359), Expect = 5e-34 Identities = 78/151 (51%), Positives = 105/151 (69%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ +L F A IS TIG+DFKIK + + KK+KL IW Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFIS-TIGIDFKIKTVELQGKKIKLQIW 63 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERF TIT+SYYRGA GI+LVYD+T +SF N++ W + I+ H+ N++ +ML+G Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLG 121 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D+ R+V +G A++ G F E+S Sbjct: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETS 152
>RAB10_HUMAN (P61026) Ras-related protein Rab-10| Length = 200 Score = 142 bits (359), Expect = 5e-34 Identities = 78/151 (51%), Positives = 105/151 (69%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ +L F A IS TIG+DFKIK + + KK+KL IW Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFIS-TIGIDFKIKTVELQGKKIKLQIW 63 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERF TIT+SYYRGA GI+LVYD+T +SF N++ W + I+ H+ N++ +ML+G Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLG 121 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D+ R+V +G A++ G F E+S Sbjct: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETS 152
>RAB10_CANFA (P24409) Ras-related protein Rab-10| Length = 200 Score = 142 bits (359), Expect = 5e-34 Identities = 78/151 (51%), Positives = 105/151 (69%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ +L F A IS TIG+DFKIK + + KK+KL IW Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFIS-TIGIDFKIKTVELQGKKIKLQIW 63 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERF TIT+SYYRGA GI+LVYD+T +SF N++ W + I+ H+ N++ +ML+G Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLG 121 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D+ R+V +G A++ G F E+S Sbjct: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETS 152
>RAB8_DISOM (P22128) Ras-related protein Rab-8 (ORA2)| Length = 210 Score = 142 bits (357), Expect = 8e-34 Identities = 78/151 (51%), Positives = 104/151 (68%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ LL F A IS TIG+DFKI+ + + KK+KL IW Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFIS-TIGIDFKIRTVELDGKKIKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+ VYD+T +SF N+ + W + IE H+++ + +M++G Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +E R V+ E G A G FLE+S Sbjct: 121 NKCDMNEKRQVSKERGEKLAIDYGIKFLETS 151
>RAB3B_BOVIN (P10948) Ras-related protein Rab-3B (SMG P25B)| Length = 219 Score = 141 bits (355), Expect = 1e-33 Identities = 75/162 (46%), Positives = 110/162 (67%) Frame = +3 Query: 66 GAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLT 245 G A + ++D FK+L+IG+S+VGK+S L + T +S T+G+DFK+K + Sbjct: 7 GKAGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVS-TVGIDFKVKTVY 65 Query: 246 VGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHS 425 +K++KL IWDTAGQER+RTIT++YYRGA G IL+YD+T +SF + D WA +I+ +S Sbjct: 66 RHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYS 124 Query: 426 TNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + V +LVGNK D +E+R+V TE+G A+Q G F E+S Sbjct: 125 WDNAQV-ILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEAS 165
>RAB8A_RAT (P35280) Ras-related protein Rab-8A| Length = 207 Score = 141 bits (355), Expect = 1e-33 Identities = 76/151 (50%), Positives = 104/151 (68%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ +L F A IS TIG+DFKI+ + + K++KL IW Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFIS-TIGIDFKIRTIELDGKRIKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+LVYD+T +SF N+ + W + IE H+ + + KM++G Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHA-SADVEKMILG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R V+ E G A G F+E+S Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
>RAB8A_MOUSE (P55258) Ras-related protein Rab-8A (Oncogene c-mel)| Length = 207 Score = 141 bits (355), Expect = 1e-33 Identities = 76/151 (50%), Positives = 104/151 (68%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ +L F A IS TIG+DFKI+ + + K++KL IW Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFIS-TIGIDFKIRTIELDGKRIKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+LVYD+T +SF N+ + W + IE H+ + + KM++G Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHA-SADVEKMILG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R V+ E G A G F+E+S Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
>RAB8A_MACFA (Q4R5P1) Ras-related protein Rab-8A| Length = 207 Score = 141 bits (355), Expect = 1e-33 Identities = 76/151 (50%), Positives = 104/151 (68%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ +L F A IS TIG+DFKI+ + + K++KL IW Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFIS-TIGIDFKIRTIELDGKRIKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+LVYD+T +SF N+ + W + IE H+ + + KM++G Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHA-SADVEKMILG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R V+ E G A G F+E+S Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
>RAB8A_HUMAN (P61006) Ras-related protein Rab-8A (Oncogene c-mel)| Length = 207 Score = 141 bits (355), Expect = 1e-33 Identities = 76/151 (50%), Positives = 104/151 (68%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ +L F A IS TIG+DFKI+ + + K++KL IW Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFIS-TIGIDFKIRTIELDGKRIKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+LVYD+T +SF N+ + W + IE H+ + + KM++G Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHA-SADVEKMILG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R V+ E G A G F+E+S Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
>RAB8A_CANFA (P61007) Ras-related protein Rab-8A (Oncogene c-mel)| Length = 207 Score = 141 bits (355), Expect = 1e-33 Identities = 76/151 (50%), Positives = 104/151 (68%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ +L F A IS TIG+DFKI+ + + K++KL IW Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFIS-TIGIDFKIRTIELDGKRIKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFRTIT++YYRGA GI+LVYD+T +SF N+ + W + IE H+ + + KM++G Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHA-SADVEKMILG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R V+ E G A G F+E+S Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
>YPT1_SCHPO (P11620) GTP-binding protein ypt1| Length = 203 Score = 140 bits (353), Expect = 2e-33 Identities = 80/150 (53%), Positives = 100/150 (66%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + K +KL IWD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTFELEGKTVKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGII+VYDVT + SF N+ W +EI+ ++ + ++LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAV-EGVNRLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D + ++V FA FLE+S Sbjct: 122 KSDMVDKKVVEYSVAKEFADSLNIPFLETS 151
>RAB10_DISOM (P22127) Ras-related protein Rab-10 (ORA1)| Length = 200 Score = 140 bits (352), Expect = 3e-33 Identities = 76/151 (50%), Positives = 104/151 (68%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ +L F A IS TIG+DFKIK + + KK+KL IW Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFIS-TIGIDFKIKTVELHGKKIKLQIW 63 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERF TIT+SYYRGA GI+LVYD+T +SF N++ W + I+ H+ N++ +ML+G Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLG 121 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R+V +G A++ F E+S Sbjct: 122 NKCDMEDKRVVLKSKGEQIAREHAIRFFETS 152
>RAB3B_MOUSE (Q9CZT8) Ras-related protein Rab-3B| Length = 219 Score = 139 bits (351), Expect = 4e-33 Identities = 74/162 (45%), Positives = 109/162 (67%) Frame = +3 Query: 66 GAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLT 245 G + ++D FK+L+IG+S+VGK+S L + T +S T+G+DFK+K + Sbjct: 7 GKTGIKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVS-TVGIDFKVKTVY 65 Query: 246 VGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHS 425 +K++KL IWDTAGQER+RTIT++YYRGA G IL+YD+T +SF + D WA +I+ +S Sbjct: 66 RHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYS 124 Query: 426 TNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + V +LVGNK D +E+R+V TE+G A+Q G F E+S Sbjct: 125 WDNAQV-ILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEAS 165
>RAB3B_HUMAN (P20337) Ras-related protein Rab-3B| Length = 219 Score = 139 bits (351), Expect = 4e-33 Identities = 74/162 (45%), Positives = 109/162 (67%) Frame = +3 Query: 66 GAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLT 245 G + ++D FK+L+IG+S+VGK+S L + T +S T+G+DFK+K + Sbjct: 7 GKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVS-TVGIDFKVKTVY 65 Query: 246 VGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHS 425 +K++KL IWDTAGQER+RTIT++YYRGA G IL+YD+T +SF + D WA +I+ +S Sbjct: 66 RHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYS 124 Query: 426 TNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + V +LVGNK D +E+R+V TE+G A+Q G F E+S Sbjct: 125 WDNAQV-ILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEAS 165
>RAB3B_RAT (Q63941) Ras-related protein Rab-3B| Length = 219 Score = 139 bits (349), Expect = 7e-33 Identities = 73/162 (45%), Positives = 109/162 (67%) Frame = +3 Query: 66 GAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLT 245 G + ++D FK+L+IG+S+VGK+S L + T +S T+G+DFK+K + Sbjct: 7 GNTGIRDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVS-TVGIDFKVKTVY 65 Query: 246 VGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHS 425 +K++KL IWDTAGQER+RTIT++YYRGA G IL+YD+T +SF + D WA +I+ +S Sbjct: 66 RHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYS 124 Query: 426 TNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + V +LVGNK D +E+R++ TE+G A+Q G F E+S Sbjct: 125 WDNAQV-ILVGNKCDMEEERVIPTEKGRLLAEQLGFDFFEAS 165
>RAB3A_BOVIN (P11023) Ras-related protein Rab-3A (SMG P25A)| Length = 219 Score = 139 bits (349), Expect = 7e-33 Identities = 70/151 (46%), Positives = 107/151 (70%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K + DK++KL IW Sbjct: 17 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVS-TVGIDFKVKTIYRNDKRIKLQIW 75 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G IL+YD+T +SF + D W+ +I+ +S++ V +LVG Sbjct: 76 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSSDNAQV-LLVG 133 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +++R+V++E G A G F E+S Sbjct: 134 NKCDMEDERVVSSERGRQLADHLGFEFFEAS 164
>RAB3D_RAT (Q63942) GTP-binding protein Rab-3D| Length = 219 Score = 138 bits (348), Expect = 9e-33 Identities = 76/167 (45%), Positives = 112/167 (67%) Frame = +3 Query: 51 PPPRPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFK 230 PP P AA ++D FK+LLIG+S+VGK+S L + + T +S T+G+DFK Sbjct: 7 PPASPRDAA-----DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVS-TVGIDFK 60 Query: 231 IKFLTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKE 410 +K + DK++KL IWDTAGQER+RTIT++YYRGA G +L+YD+ ++SFT + D WA + Sbjct: 61 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQD-WATQ 119 Query: 411 IELHSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 I+ +S + V +LVGNK D +++R+V+ E+G A G F E+S Sbjct: 120 IKTYSWDNAQV-ILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEAS 165
>RAB3D_MOUSE (P35276) Ras-related protein Rab-3D| Length = 219 Score = 138 bits (348), Expect = 9e-33 Identities = 76/167 (45%), Positives = 111/167 (66%) Frame = +3 Query: 51 PPPRPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFK 230 PP P AA ++D FK+LLIG+S+VGK+S L + + T +S T+G+DFK Sbjct: 7 PPASPRDAA-----DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVS-TVGIDFK 60 Query: 231 IKFLTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKE 410 +K + DK++KL IWDTAGQER+RTIT++YYRGA G +L+YD+ ++SFT + D WA + Sbjct: 61 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQD-WATQ 119 Query: 411 IELHSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 I+ +S + V +LVGNK D +++R+V E+G A G F E+S Sbjct: 120 IKTYSWDNAQV-ILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEAS 165
>YPTV4_VOLCA (P36863) GTP-binding protein yptV4 (RAB2 homolog)| Length = 213 Score = 138 bits (347), Expect = 1e-32 Identities = 76/155 (49%), Positives = 101/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 SY FK ++IGD+ VGKS LL+ F TD P TIGV+F + + + K++K Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMINIDGKQIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R++F +LA W ++ H+ N Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ML+GNK D R VTTEEG FA++ G +FLE+S Sbjct: 115 MLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETS 149
>YPTC4_CHLRE (Q39570) GTP-binding protein YPTC4| Length = 213 Score = 138 bits (347), Expect = 1e-32 Identities = 76/155 (49%), Positives = 101/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 SY FK ++IGD+ VGKS LL+ F TD P TIGV+F + + + K++K Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMINIDGKQIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R++F +LA W ++ H+ N Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ML+GNK D R VTTEEG FA++ G +FLE+S Sbjct: 115 MLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETS 149
>RAB26_HUMAN (Q9ULW5) Ras-related protein Rab-26| Length = 256 Score = 138 bits (347), Expect = 1e-32 Identities = 73/166 (43%), Positives = 106/166 (63%) Frame = +3 Query: 54 PPRPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKI 233 P +PG ++G YD +FKV+L+GDS VGK+ LLV F A T+G+DF+ Sbjct: 45 PLQPGRPSLGGGV-DFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRN 103 Query: 234 KFLTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEI 413 K L V K+KL +WDTAGQERFR++T +YYR AH ++L+YDVT + SF N+ W EI Sbjct: 104 KVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEI 162 Query: 414 ELHSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ++ + + ML+GNK+D +R+V E+G A++ G F+E+S Sbjct: 163 HEYAQH-DVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETS 207
>SEC4_CANAL (O14462) Ras-related protein SEC4| Length = 210 Score = 137 bits (346), Expect = 2e-32 Identities = 75/159 (47%), Positives = 105/159 (66%), Gaps = 4/159 (2%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGD 254 T +YD K+LL+GDS VGKS LL+ FV +D +P TIG+DFKI+ + Sbjct: 6 TSSRAYDMIMKLLLVGDSGVGKSCLLLRFV-----EDKFNPSFITTIGIDFKIRTIESKG 60 Query: 255 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNK 434 K++KL +WDTAGQERFRTIT++YYRGA GI+L+YDVT +SF N+ + W + + H+ N+ Sbjct: 61 KRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVEN-WFQTVTQHA-NE 118 Query: 435 ECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + LVGNK D + +R V+ E+G A + FLE+S Sbjct: 119 DAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEAS 157
>RAB3A_RAT (P63012) Ras-related protein Rab-3A| Length = 220 Score = 137 bits (346), Expect = 2e-32 Identities = 70/151 (46%), Positives = 106/151 (70%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K + DK++KL IW Sbjct: 18 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVS-TVGIDFKVKTIYRNDKRIKLQIW 76 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G IL+YD+T +SF + D W+ +I+ +S + V +LVG Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-LLVG 134 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +++R+V++E G A G F E+S Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEAS 165
>RAB3A_MOUSE (P63011) Ras-related protein Rab-3A| Length = 220 Score = 137 bits (346), Expect = 2e-32 Identities = 70/151 (46%), Positives = 106/151 (70%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K + DK++KL IW Sbjct: 18 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVS-TVGIDFKVKTIYRNDKRIKLQIW 76 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G IL+YD+T +SF + D W+ +I+ +S + V +LVG Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-LLVG 134 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +++R+V++E G A G F E+S Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEAS 165
>RAB3A_MACFA (Q4R4R9) Ras-related protein Rab-3A| Length = 220 Score = 137 bits (346), Expect = 2e-32 Identities = 70/151 (46%), Positives = 106/151 (70%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K + DK++KL IW Sbjct: 18 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVS-TVGIDFKVKTIYRNDKRIKLQIW 76 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G IL+YD+T +SF + D W+ +I+ +S + V +LVG Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-LLVG 134 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +++R+V++E G A G F E+S Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEAS 165
>RAB3A_HUMAN (P20336) Ras-related protein Rab-3A| Length = 220 Score = 137 bits (346), Expect = 2e-32 Identities = 70/151 (46%), Positives = 106/151 (70%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K + DK++KL IW Sbjct: 18 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVS-TVGIDFKVKTIYRNDKRIKLQIW 76 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G IL+YD+T +SF + D W+ +I+ +S + V +LVG Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-LLVG 134 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +++R+V++E G A G F E+S Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEAS 165
>RB11D_TOBAC (Q40522) Ras-related protein Rab11D| Length = 222 Score = 137 bits (346), Expect = 2e-32 Identities = 74/149 (49%), Positives = 101/149 (67%) Frame = +3 Query: 105 DCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDT 284 D FKV+LIGDSAVGKS +L F + D TIGV+F+ + L + K +K IWDT Sbjct: 13 DYVFKVVLIGDSAVGKSQILARFARNEFSLDS-KATIGVEFQTRTLAIQHKSVKAQIWDT 71 Query: 285 AGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNK 464 AGQER+R +TS+YYRGA G +LVYD+TKRQ+F ++ W +E+ H+ ++ V ML+GNK Sbjct: 72 AGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPR-WLEELRAHA-DRNIVIMLIGNK 129 Query: 465 LDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D ++ R V TE+ FAQ+ G FLE+S Sbjct: 130 TDLEDQRAVPTEDAKEFAQKEGLFFLETS 158
>RAB2_LYMST (Q05975) Ras-related protein Rab-2| Length = 212 Score = 137 bits (345), Expect = 2e-32 Identities = 76/155 (49%), Positives = 101/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 SY FK ++IGD+ VGKS LL+ F TD P TIGV+F + +T+ K++K Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMITIDGKQIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R +F +L W ++ HS N V Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ML+GNK D + R V EEG AFA++ G +F+E+S Sbjct: 115 MLIGNKSDLEARREVKKEEGEAFAREHGLIFMETS 149
>RAB3C_HUMAN (Q96E17) Ras-related protein Rab-3C| Length = 227 Score = 137 bits (345), Expect = 2e-32 Identities = 69/151 (45%), Positives = 107/151 (70%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K + +K++KL IW Sbjct: 26 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVS-TVGIDFKVKTVFKNEKRIKLQIW 84 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G IL+YD+T +SF + D W+ +I+ +S + V +LVG Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-ILVG 142 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +++R+++TE G +Q G F E+S Sbjct: 143 NKCDMEDERVISTERGQHLGEQLGFEFFETS 173
>RAB3C_RAT (P62824) Ras-related protein Rab-3C| Length = 227 Score = 136 bits (343), Expect = 3e-32 Identities = 69/151 (45%), Positives = 106/151 (70%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K + +K++KL IW Sbjct: 26 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVS-TVGIDFKVKTVFKNEKRIKLQIW 84 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G IL+YD+T +SF + D W+ +I+ +S + V +L G Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-ILAG 142 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +++R+V+TE G +Q G F E+S Sbjct: 143 NKCDMEDERVVSTERGQRLGEQLGFEFFETS 173
>RAB3C_MOUSE (P62823) Ras-related protein Rab-3C| Length = 227 Score = 136 bits (343), Expect = 3e-32 Identities = 69/151 (45%), Positives = 106/151 (70%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K + +K++KL IW Sbjct: 26 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVS-TVGIDFKVKTVFKNEKRIKLQIW 84 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G IL+YD+T +SF + D W+ +I+ +S + V +L G Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-ILAG 142 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +++R+V+TE G +Q G F E+S Sbjct: 143 NKCDMEDERVVSTERGQRLGEQLGFEFFETS 173
>RAB2A_RABIT (Q01971) Ras-related protein Rab-2A| Length = 212 Score = 136 bits (343), Expect = 3e-32 Identities = 75/155 (48%), Positives = 101/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 +Y FK ++IGD+ VGKS LL+ F TD P TIGV+F + +T+ K++K Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMITIDGKQIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R +F +L W ++ HS N V Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ML+GNK D + R V EEG AFA++ G +F+E+S Sbjct: 115 MLIGNKSDLESRREVKKEEGEAFAREHGLIFMETS 149
>RAB2A_MOUSE (P53994) Ras-related protein Rab-2A| Length = 212 Score = 136 bits (343), Expect = 3e-32 Identities = 75/155 (48%), Positives = 101/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 +Y FK ++IGD+ VGKS LL+ F TD P TIGV+F + +T+ K++K Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMITIDGKQIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R +F +L W ++ HS N V Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ML+GNK D + R V EEG AFA++ G +F+E+S Sbjct: 115 MLIGNKSDLESRREVKKEEGEAFAREHGLIFMETS 149
>RAB2A_HUMAN (P61019) Ras-related protein Rab-2A| Length = 212 Score = 136 bits (343), Expect = 3e-32 Identities = 75/155 (48%), Positives = 101/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 +Y FK ++IGD+ VGKS LL+ F TD P TIGV+F + +T+ K++K Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMITIDGKQIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R +F +L W ++ HS N V Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ML+GNK D + R V EEG AFA++ G +F+E+S Sbjct: 115 MLIGNKSDLESRREVKKEEGEAFAREHGLIFMETS 149
>RAB2A_CANFA (P61105) Ras-related protein Rab-2A| Length = 212 Score = 136 bits (343), Expect = 3e-32 Identities = 75/155 (48%), Positives = 101/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 +Y FK ++IGD+ VGKS LL+ F TD P TIGV+F + +T+ K++K Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMITIDGKQIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R +F +L W ++ HS N V Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ML+GNK D + R V EEG AFA++ G +F+E+S Sbjct: 115 MLIGNKSDLESRREVKKEEGEAFAREHGLIFMETS 149
>RAB1A_DICDI (P34139) Ras-related protein Rab1A| Length = 167 Score = 136 bits (342), Expect = 5e-32 Identities = 79/150 (52%), Positives = 99/150 (66%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 Y FK+LLIGDS VGKS LL+ F ++ IS TIGVDFKI+ + + K +KL IWD Sbjct: 5 YHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFIS-TIGVDFKIRTIELNGKTIKLQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFRTITSSYYRGAHGII+VYDVT + +F N+ W +EI+ + + K+LVGN Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQ-WLQEIDRFAC-ENVNKLLVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D ++V AFA FLE+S Sbjct: 122 KSDLVAKKVVDFNTAKAFADSLQIPFLETS 151
>RAB2B_MAIZE (P49104) Ras-related protein Rab-2-B| Length = 210 Score = 135 bits (341), Expect = 6e-32 Identities = 75/155 (48%), Positives = 101/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 SY FK ++IGD+ VGKS LL+ F TD P TIGV+F + +T+ +K +K Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMITIDNKPIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R++F +LA W ++ H+ N Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NANMTI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V+ EEG FA++ G +F+E+S Sbjct: 115 MLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEAS 149
>RAB3_DROME (P25228) Ras-related protein Rab-3| Length = 220 Score = 135 bits (341), Expect = 6e-32 Identities = 71/151 (47%), Positives = 104/151 (68%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K + DK++KL IW Sbjct: 17 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVS-TVGIDFKVKTVFRHDKRVKLQIW 75 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G IL+YDVT SF ++ D W +I+ +S + V +LVG Sbjct: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQV-ILVG 133 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D ++ R+++ E G A Q G F E+S Sbjct: 134 NKCDMEDQRVISFERGRQLADQLGVEFFETS 164
>RAB2A_RAT (P05712) Ras-related protein Rab-2A| Length = 212 Score = 135 bits (340), Expect = 8e-32 Identities = 74/155 (47%), Positives = 101/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 +Y FK ++IGD+ VGKS LL+ F TD P T+GV+F + +T+ K++K Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTMGVEFGARMITIDGKQIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R +F +L W ++ HS N V Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ML+GNK D + R V EEG AFA++ G +F+E+S Sbjct: 115 MLIGNKSDLESRREVKKEEGEAFAREHGLIFMETS 149
>RB11C_TOBAC (Q40520) Ras-related protein Rab11C| Length = 222 Score = 135 bits (340), Expect = 8e-32 Identities = 73/149 (48%), Positives = 100/149 (67%) Frame = +3 Query: 105 DCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDT 284 D FKV+LIGDSAVGK+ +L F + D TIGV+F+ + L + K +K IWDT Sbjct: 13 DYVFKVVLIGDSAVGKTQILARFARNEFSLDS-KATIGVEFQTRTLVIQHKSVKAQIWDT 71 Query: 285 AGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNK 464 AGQER+R +TS+YYRGA G +LVYD+TKRQ+F ++ W +E+ H+ ++ V ML GNK Sbjct: 72 AGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPR-WLEELRAHA-DRNIVIMLTGNK 129 Query: 465 LDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D ++ R V TE+ FAQ+ G FLE+S Sbjct: 130 TDLEDQRAVPTEDAKEFAQKEGLFFLETS 158
>RAB1B_DICDI (P34140) Ras-related protein Rab1B (Fragment)| Length = 199 Score = 134 bits (338), Expect = 1e-31 Identities = 78/146 (53%), Positives = 98/146 (67%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK+LLIGDS VGKS LL+ F T+ IS TIGVDFKI+ + + K +KL IWDTAG Sbjct: 3 FKLLLIGDSGVGKSCLLLRFADDTYTESYIS-TIGVDFKIRTINLDGKIIKLQIWDTAG- 60 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFRTITSSYYRGAHGII+VYDVT SF N+ W +EI+ ++ + ++LVGNK D Sbjct: 61 ERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQ-WMQEIQRYACD-SVTRLLVGNKCDL 118 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 E ++V T +A G F E+S Sbjct: 119 IEKKIVDTSTAREYADSVGIPFKETS 144
>RAB37_HUMAN (Q96AX2) Ras-related protein Rab-37| Length = 222 Score = 134 bits (338), Expect = 1e-31 Identities = 71/165 (43%), Positives = 105/165 (63%), Gaps = 1/165 (0%) Frame = +3 Query: 60 RPGAAAMGSTPGS-SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIK 236 R G A S P S SYD + KV+L+GD+ VGK+ L+ F A T+G+DF+ K Sbjct: 10 RDGEAPERSPPCSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNK 69 Query: 237 FLTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIE 416 +TV ++KL IWDTAGQERFR++T +YYR A ++L+YD+T + SF N+ W EI Sbjct: 70 VVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIR-AWLTEIH 128 Query: 417 LHSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ++ ++ V ML+GNK D +R++ +E+G A++ G FLE+S Sbjct: 129 EYA-QRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETS 172
>RAB3D_HUMAN (O95716) Ras-related protein Rab-3D| Length = 219 Score = 134 bits (337), Expect = 2e-31 Identities = 70/151 (46%), Positives = 105/151 (69%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+LLIG+S+VGK+S L + + T +S T+G+DFK+K + DK++KL IW Sbjct: 18 NFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVS-TVGIDFKVKTVYRHDKRIKLQIW 76 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G +L+YD+ ++SF + D WA +I+ +S + V +LVG Sbjct: 77 DTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQV-ILVG 134 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +++R+V E+G A G F E+S Sbjct: 135 NKCDLEDERVVPAEDGRRLADDLGFEFFEAS 165
>RAB13_HUMAN (P51153) Ras-related protein Rab-13| Length = 203 Score = 134 bits (336), Expect = 2e-31 Identities = 72/151 (47%), Positives = 102/151 (67%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ L++ F + IS TIG+DFKI+ + + KK+KL +W Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYIS-TIGIDFKIRTVDIEGKKIKLQVW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERF+TIT++YYRGA GIILVYD+T +SF N+ + W K I+ + + ++L+G Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D + R V E+ A++ G F E+S Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETS 151
>RAB2A_MAIZE (P49103) Ras-related protein Rab-2-A| Length = 209 Score = 134 bits (336), Expect = 2e-31 Identities = 74/155 (47%), Positives = 100/155 (64%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 SY FK ++IGD+ VGKS LL+ F TD P TIGV+F + + + +K +K Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMINIDNKPIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R++F +LA W ++ H+ N Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NANMTI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V+ EEG FA++ G +F+E+S Sbjct: 115 MLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEAS 149
>RAB4_DICDI (P36410) Ras-related protein Rab4| Length = 205 Score = 133 bits (334), Expect = 4e-31 Identities = 76/151 (50%), Positives = 98/151 (64%), Gaps = 1/151 (0%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP-TIGVDFKIKFLTVGDKKLKLTIW 278 Y+ FK ++IGD VGKS LL F D SP TIGV+F + + V +KK+KL IW Sbjct: 5 YEYIFKYIIIGDMGVGKSCLLHQFTENKFVPD--SPHTIGVEFGTRIVDVNNKKIKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR +T SYYRGA G +LVYD+T+R ++ +L W + + TN V ML+G Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLT-TWLTDAR-NLTNPNTVIMLIG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D + R VT EE AFA+Q G +F+ESS Sbjct: 121 NKKDLEGQRDVTYEEASAFAKQNGLIFVESS 151
>RAB10_RAT (P35281) Ras-related protein Rab-10| Length = 200 Score = 133 bits (334), Expect = 4e-31 Identities = 75/151 (49%), Positives = 101/151 (66%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ +L F A IS TI +DFKIK + + KK+KL IW Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFIS-TIEIDFKIKTVELQGKKIKLQIW 63 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERF TIT+SYYRGA GI+LVYD+T +SF N++ W + I+ H+ N++ +ML+ Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDQHA-NEDVERMLLR 121 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D R+V +G A++ F E+S Sbjct: 122 NKCDMDHKRVVPKGKGEQIAREHRIRFFETS 152
>RB11B_ARATH (Q39222) Ras-related protein Rab11| Length = 216 Score = 133 bits (334), Expect = 4e-31 Identities = 78/150 (52%), Positives = 99/150 (66%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FKV+LIGDS VGKS+LL F + S TIGV+F + L V K +K IWD Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKS-TIGVEFATRTLKVDGKVVKAQIWD 68 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQER+R ITS+YYRGA G +LVYDVT+R +F N+ D W KE++ H T+ V MLVGN Sbjct: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRRATFENV-DRWLKELKNH-TDPNIVVMLVGN 126 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D V TE+G ++A+Q F+E+S Sbjct: 127 KSDLRHLLAVPTEDGKSYAEQESLCFMETS 156
>RAB2B_MOUSE (P59279) Ras-related protein Rab-2B| Length = 216 Score = 133 bits (334), Expect = 4e-31 Identities = 73/155 (47%), Positives = 102/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 +Y FK ++IGD+ VGKS LL+ F TD P TIGV+F + + + K++K Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMVNIDGKQIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R++F +L W ++ HS++ V Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ML+GNK D + R V EEG AFA++ G +F+E+S Sbjct: 115 MLIGNKSDLESRRDVKREEGEAFAREHGLIFMETS 149
>RAB2B_HUMAN (Q8WUD1) Ras-related protein Rab-2B| Length = 216 Score = 133 bits (334), Expect = 4e-31 Identities = 73/155 (47%), Positives = 102/155 (65%), Gaps = 4/155 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLK 266 +Y FK ++IGD+ VGKS LL+ F TD P TIGV+F + + + K++K Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMVNIDGKQIK 56 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE FR+IT SYYRGA G +LVYD+T+R++F +L W ++ HS++ V Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVI 114 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ML+GNK D + R V EEG AFA++ G +F+E+S Sbjct: 115 MLIGNKSDLESRRDVKREEGEAFAREHGLIFMETS 149
>RAB13_BOVIN (Q58DS5) Ras-related protein Rab-13| Length = 203 Score = 132 bits (333), Expect = 5e-31 Identities = 71/151 (47%), Positives = 102/151 (67%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ L++ F + IS TIG+DF+I+ + + KK+KL +W Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYIS-TIGIDFRIRTVDIEGKKIKLQVW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERF+TIT++YYRGA GIILVYD+T +SF N+ + W K I+ + + ++L+G Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D + R V E+ A++ G F E+S Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETS 151
>YPT3_SCHPO (P17610) GTP-binding protein ypt3 (RAB)| Length = 214 Score = 132 bits (333), Expect = 5e-31 Identities = 75/150 (50%), Positives = 99/150 (66%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK +LIGDS VGKS+LL+ F + S TIGV+F + + + +KK+K IWD Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKS-TIGVEFATRNIVLDNKKIKAQIWD 65 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQER+R ITS+YYRGA G ++VYD+TK+ SF N+ W KE+ H+ + V MLVGN Sbjct: 66 TAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGR-WLKELREHA-DSNIVIMLVGN 123 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D R V+TEE AFA + F+E+S Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETS 153
>RB11A_LOTJA (Q40191) Ras-related protein Rab11A| Length = 226 Score = 132 bits (333), Expect = 5e-31 Identities = 74/149 (49%), Positives = 100/149 (67%) Frame = +3 Query: 105 DCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDT 284 D FKV+LIGDSAVGKS +L F + D S TIGV+F+ + L + K +K IWDT Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKS-TIGVEFQTRTLVIDHKTVKAQIWDT 73 Query: 285 AGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNK 464 AGQER+R +TS+YYRGA G +LVYD+TKRQ+F ++ W +E+ H+ +K V +L+GNK Sbjct: 74 AGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPR-WLEELRNHA-DKNIVIILIGNK 131 Query: 465 LDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D R V TE+ FA++ G FLE+S Sbjct: 132 CDLVNQRDVPTEDAKEFAEKEGLFFLETS 160
>RGP2_ORYSA (Q40723) Ras-related protein RGP2 (GTP-binding regulatory protein| RGP2) Length = 217 Score = 131 bits (330), Expect = 1e-30 Identities = 77/158 (48%), Positives = 101/158 (63%) Frame = +3 Query: 78 MGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDK 257 MG Y FK++LIGD+ VGKS++L F + D S TIGV+F K L + K Sbjct: 1 MGGRVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKS-TIGVEFATKSLQMEGK 59 Query: 258 KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKE 437 +K IWDTAGQER+R ITS+YYRGA G +LVYD+TKRQSF N+ W +E+ H+ + Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNV-HRWLRELRDHA-DSS 117 Query: 438 CVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V M+VGNK D R V+ +EG A A++ G FLE+S Sbjct: 118 IVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETS 155
>RB11B_TOBAC (Q40521) Ras-related protein Rab11B| Length = 217 Score = 131 bits (330), Expect = 1e-30 Identities = 76/159 (47%), Positives = 103/159 (64%) Frame = +3 Query: 75 AMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGD 254 A G YD FK++LIGDS VGKS+LL F S + + TIGV+F + + V D Sbjct: 2 AGGYRAEDDYDYLFKLVLIGDSGVGKSNLLSRF-SRNEFNLESKSTIGVEFATRSIRVDD 60 Query: 255 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNK 434 K +K IWDTAGQER+R ITS+YYRGA G ++VYD+T+ +F N+ + W KE+ H T++ Sbjct: 61 KIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENV-ERWLKELRDH-TDQ 118 Query: 435 ECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V MLVGNK D R V+TE+ AFA++ F+E+S Sbjct: 119 NIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETS 157
>RIC2_ORYSA (P40393) Ras-related protein RIC2| Length = 217 Score = 130 bits (328), Expect = 2e-30 Identities = 79/159 (49%), Positives = 100/159 (62%) Frame = +3 Query: 75 AMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGD 254 A G YD FKV+LIGDS VGKS+LL F + + S TIGV+F + L V Sbjct: 2 AAGYREEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKS-TIGVEFATRSLQVDG 60 Query: 255 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNK 434 K +K IWDTAGQER+R ITS+YYRGA G +LVYDVT+ +F N+ + W KE+ H T+ Sbjct: 61 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLKELRDH-TDP 118 Query: 435 ECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V MLVGNK D V T+EG AFA++ F+E+S Sbjct: 119 NIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETS 157
>RB11C_ARATH (O04486) Ras-related protein Rab11C| Length = 217 Score = 130 bits (328), Expect = 2e-30 Identities = 76/158 (48%), Positives = 100/158 (63%) Frame = +3 Query: 78 MGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDK 257 M P YD FKV+LIGDS VGKS+LL F + S TIGV+F + L V + Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKS-TIGVEFATRTLQVEGR 59 Query: 258 KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKE 437 +K IWDTAGQER+R ITS+YYRGA G +LVYDVTK +F N++ W KE+ H+ + Sbjct: 60 TVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSR-WLKELRDHA-DSN 117 Query: 438 CVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V ML+GNK D R V TE+ ++A++ G F+E+S Sbjct: 118 IVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETS 155
>RAB37_MOUSE (Q9JKM7) Ras-related protein Rab-37| Length = 223 Score = 130 bits (327), Expect = 2e-30 Identities = 71/171 (41%), Positives = 106/171 (61%), Gaps = 8/171 (4%) Frame = +3 Query: 63 PGAAAMG-------STPGS-SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIG 218 PGAA G S P S +YD + KV+L+GDS VGK+ L+ F A T+G Sbjct: 5 PGAATAGDGEAPERSPPFSPNYDLTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVG 64 Query: 219 VDFKIKFLTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADV 398 +D + K +TV ++KL IWDTAGQERFR++T +YYR A ++L+YD+T + SF N+ Sbjct: 65 IDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIR-A 123 Query: 399 WAKEIELHSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 W EI ++ ++ V ML+GNK D +R++ +E+G A++ G F+E+S Sbjct: 124 WLTEIHEYA-QRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPFMETS 173
>YPTC6_CHLRE (Q39572) Ras-related protein YPTC6| Length = 216 Score = 130 bits (327), Expect = 2e-30 Identities = 77/158 (48%), Positives = 99/158 (62%) Frame = +3 Query: 78 MGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDK 257 M P YD FKV+LIGDS VGKS+LL F + + S TIGV+F + + V K Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKS-TIGVEFATRSIQVDGK 59 Query: 258 KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKE 437 +K IWDTAGQER+R ITS+YYRGA G +LVYD+TK +F N+ + W KE+ H+ + Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENV-ERWLKELRDHA-DSN 117 Query: 438 CVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V MLVGNK D R V TE AF ++ G F+E+S Sbjct: 118 IVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETS 155
>RB11D_LOTJA (Q40194) Ras-related protein Rab11D| Length = 218 Score = 130 bits (327), Expect = 2e-30 Identities = 78/157 (49%), Positives = 98/157 (62%) Frame = +3 Query: 81 GSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKK 260 G YD FK++LIGDS VGKS+LL F + S TIGV+F K L V K Sbjct: 3 GYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKS-TIGVEFATKTLNVDAKV 61 Query: 261 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC 440 +K IWDTAGQER+R ITS+YYRGA G +LVYDVT+R +F N A W KE+ H T+ Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAAR-WLKELRDH-TDPNI 119 Query: 441 VKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V ML+GNK D V TE+G +FA++ F+E+S Sbjct: 120 VVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETS 156
>RAB13_MOUSE (Q9DD03) Ras-related protein Rab-13| Length = 202 Score = 130 bits (326), Expect = 3e-30 Identities = 70/151 (46%), Positives = 100/151 (66%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ L++ F IS TIG+DFKI+ + + K++KL +W Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYIS-TIGIDFKIRTVDIEGKRIKLQVW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERF+TIT++YYRGA GIILVYD+T +SF N+ + W K I+ + + ++L+G Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D + R V E+ A++ F E+S Sbjct: 121 NKCDMEAKRQVQREQAEKLAREHRIRFFETS 151
>RAB3C_BOVIN (P10949) Ras-related protein Rab-3C (SMG P25C)| Length = 226 Score = 130 bits (326), Expect = 3e-30 Identities = 66/151 (43%), Positives = 102/151 (67%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 ++D FK+L+IG+S+VGK+S L + + T +S T+G+DFK+K + +K++KL IW Sbjct: 26 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVS-TVGIDFKVKTVFKNEKRIKLQIW 84 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQER+RTIT++YYRGA G IL+YD+T +SF + D W+ N + + LVG Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSLNQTYSWDNAQVI--LVG 141 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D +++R++++EEG + G F E+S Sbjct: 142 NKCDMEDERVISSEEGQHLGEHLGFEFFETS 172
>RAB13_RAT (P35286) Ras-related protein Rab-13| Length = 203 Score = 129 bits (325), Expect = 4e-30 Identities = 70/151 (46%), Positives = 100/151 (66%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK+LLIGDS VGK+ L++ F IS TIG+DFKI+ + + K++KL +W Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYIS-TIGIDFKIRTVEIEGKRIKLQVW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERF+TIT++YYRGA GIILVYD+T +SF N+ + W K I+ + + ++L+G Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D + R V E+ A++ F E+S Sbjct: 121 NKCDMEAKRKVQREQAERLAREHRIRFFETS 151
>RB2BV_BETVU (Q39434) Ras-related protein Rab2BV| Length = 214 Score = 129 bits (324), Expect = 6e-30 Identities = 75/158 (47%), Positives = 100/158 (63%) Frame = +3 Query: 78 MGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDK 257 M + YD FK++LIGDS VGKS++L F + S TIGV+F + L V K Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKS-TIGVEFATRTLQVEGK 59 Query: 258 KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKE 437 +K IWDTAGQER+R ITS+YYRGA G +LVYD+TKRQ+F N+ W +E+ H+ + Sbjct: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV-QRWLRELRDHA-DSN 117 Query: 438 CVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V M+ GNK D R V+ E+G A A++ G FLE+S Sbjct: 118 IVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETS 155
>RAB4A_RAT (P05714) Ras-related protein Rab-4A| Length = 213 Score = 129 bits (324), Expect = 6e-30 Identities = 72/151 (47%), Positives = 98/151 (64%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK L+IG++ GKS LL F+ DD + TIGV+F K + VG K +KL IW Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDS-NHTIGVEFGQKIINVGGKYVKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR++T+SYYRGA G +LVYD+T R+++ L + W + + ++ V +L G Sbjct: 63 DTAGQERFRSVTTSYYRGAAGALLVYDITSRETYNALTN-WLTDARM-LASQNIVIILCG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D DR VT E FAQ+ +FLE+S Sbjct: 121 NKKDLDADREVTFLEASRFAQENELMFLETS 151
>RAB4A_HUMAN (P20338) Ras-related protein Rab-4A| Length = 213 Score = 129 bits (323), Expect = 7e-30 Identities = 72/151 (47%), Positives = 97/151 (64%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK L+IG++ GKS LL F+ DD + TIGV+F K + VG K +KL IW Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDS-NHTIGVEFGSKIINVGGKYVKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR++T SYYRGA G +LVYD+T R+++ L + W + + ++ V +L G Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTN-WLTDARM-LASQNIVIILCG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D DR VT E FAQ+ +FLE+S Sbjct: 121 NKKDLDADREVTFLEASRFAQENELMFLETS 151
>RAB4A_BOVIN (Q2TBH7) Ras-related protein Rab-4A| Length = 213 Score = 129 bits (323), Expect = 7e-30 Identities = 72/151 (47%), Positives = 97/151 (64%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK L+IG++ GKS LL F+ DD + TIGV+F K + VG K +KL IW Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDS-NHTIGVEFGSKIINVGGKYVKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR++T SYYRGA G +LVYD+T R+++ L + W + + ++ V +L G Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTN-WLTDARM-LASQNIVIILCG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D DR VT E FAQ+ +FLE+S Sbjct: 121 NKKDLDTDREVTFLEASRFAQENELMFLETS 151
>ARA4_ARATH (P28187) Ras-related protein ARA-4| Length = 214 Score = 128 bits (322), Expect = 9e-30 Identities = 66/146 (45%), Positives = 98/146 (67%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK+++IGDSAVGKS+LL + + + + TIGV+F+ + + + K++K IWDTAGQ Sbjct: 13 FKIVIIGDSAVGKSNLLTRY-ARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQ 71 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFR +TS+YYRGA G ++VYD+T+ +F N+ W E+ HS + KML+GNK D Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDITRSSTFENVGR-WLDELNTHS-DTTVAKMLIGNKCDL 129 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 + R V+ EEG + A+ G F+E+S Sbjct: 130 ESIRAVSVEEGKSLAESEGLFFMETS 155
>RB11A_RAT (P62494) Ras-related protein Rab-11A (Rab-11) (24KG)| Length = 215 Score = 128 bits (322), Expect = 9e-30 Identities = 75/155 (48%), Positives = 98/155 (63%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 2 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 60 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVI 118 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ G F+E+S Sbjct: 119 MLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETS 153
>RB11A_RABIT (P62493) Ras-related protein Rab-11A (Rab-11)| Length = 215 Score = 128 bits (322), Expect = 9e-30 Identities = 75/155 (48%), Positives = 98/155 (63%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 2 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 60 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVI 118 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ G F+E+S Sbjct: 119 MLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETS 153
>RB11A_PONPY (Q5R9M7) Ras-related protein Rab-11A| Length = 215 Score = 128 bits (322), Expect = 9e-30 Identities = 75/155 (48%), Positives = 98/155 (63%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 2 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 60 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVI 118 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ G F+E+S Sbjct: 119 MLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETS 153
>RB11A_PIG (Q52NJ1) Ras-related protein Rab-11A| Length = 215 Score = 128 bits (322), Expect = 9e-30 Identities = 75/155 (48%), Positives = 98/155 (63%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 2 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 60 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVI 118 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ G F+E+S Sbjct: 119 MLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETS 153
>RB11A_MOUSE (P62492) Ras-related protein Rab-11A (Rab-11)| Length = 215 Score = 128 bits (322), Expect = 9e-30 Identities = 75/155 (48%), Positives = 98/155 (63%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 2 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 60 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVI 118 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ G F+E+S Sbjct: 119 MLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETS 153
>RB11A_HUMAN (P62491) Ras-related protein Rab-11A (Rab-11) (YL8)| Length = 215 Score = 128 bits (322), Expect = 9e-30 Identities = 75/155 (48%), Positives = 98/155 (63%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 2 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 60 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVI 118 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ G F+E+S Sbjct: 119 MLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETS 153
>RB11A_CANFA (P62490) Ras-related protein Rab-11A (Rab-11)| Length = 215 Score = 128 bits (322), Expect = 9e-30 Identities = 75/155 (48%), Positives = 98/155 (63%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 2 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 60 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVI 118 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ G F+E+S Sbjct: 119 MLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETS 153
>ARA1_ARATH (P19892) Ras-related protein ARA-1| Length = 218 Score = 128 bits (322), Expect = 9e-30 Identities = 67/146 (45%), Positives = 101/146 (69%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK+++IGDSAVGKS+LL + + + TIGV+F+ + + + K++K IWDTAGQ Sbjct: 13 FKIVVIGDSAVGKSNLLSRYARNEFSANS-KATIGVEFQTQSMEIEGKEVKAQIWDTAGQ 71 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFR +TS+YYRGA G ++VYD+T+R +F ++ W E+++HS + +MLVGNK D Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDITRRTTFESVGR-WLDELKIHS-DTTVARMLVGNKCDL 129 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 + R V+ EEG A A++ G F+E+S Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETS 155
>RAB14_RAT (P61107) Ras-related protein Rab-14| Length = 214 Score = 128 bits (321), Expect = 1e-29 Identities = 71/156 (45%), Positives = 97/156 (62%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 +T +Y FK ++IGD VGKS LL F D TIGV+F + + V +K+ Sbjct: 1 ATTPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMAD-CPHTIGVEFGTRIIEVSGQKI 59 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFR +T SYYRGA G ++VYD+T+R ++ +L+ W + + TN V Sbjct: 60 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-WLTDAR-NLTNPNTV 117 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +L+GNK D + R VT EE FA++ G LFLE+S Sbjct: 118 IILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEAS 153
>RAB14_MOUSE (Q91V41) Ras-related protein Rab-14| Length = 214 Score = 128 bits (321), Expect = 1e-29 Identities = 71/156 (45%), Positives = 97/156 (62%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 +T +Y FK ++IGD VGKS LL F D TIGV+F + + V +K+ Sbjct: 1 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMAD-CPHTIGVEFGTRIIEVSGQKI 59 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFR +T SYYRGA G ++VYD+T+R ++ +L+ W + + TN V Sbjct: 60 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-WLTDAR-NLTNPNTV 117 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +L+GNK D + R VT EE FA++ G LFLE+S Sbjct: 118 IILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEAS 153
>RAB14_HUMAN (P61106) Ras-related protein Rab-14| Length = 214 Score = 128 bits (321), Expect = 1e-29 Identities = 71/156 (45%), Positives = 97/156 (62%) Frame = +3 Query: 84 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 263 +T +Y FK ++IGD VGKS LL F D TIGV+F + + V +K+ Sbjct: 1 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMAD-CPHTIGVEFGTRIIEVSGQKI 59 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 KL IWDTAGQERFR +T SYYRGA G ++VYD+T+R ++ +L+ W + + TN V Sbjct: 60 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-WLTDAR-NLTNPNTV 117 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +L+GNK D + R VT EE FA++ G LFLE+S Sbjct: 118 IILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEAS 153
>RAB4A_MOUSE (P56371) Ras-related protein Rab-4A| Length = 213 Score = 128 bits (321), Expect = 1e-29 Identities = 71/151 (47%), Positives = 97/151 (64%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK L+IG++ GKS LL F+ DD + TIG++F K + VG K +KL IW Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDS-NHTIGMEFGSKIINVGGKYVKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR++T SYYRGA G +LVYD+T R+++ L + W + + ++ V +L G Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTN-WLTDARM-LASQNIVLILCG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D DR VT E FAQ+ +FLE+S Sbjct: 121 NKKDLDADREVTFLEASRFAQENELMFLETS 151
>RB11B_DISOM (P22129) Ras-related protein Rab-11B (ORA3)| Length = 218 Score = 127 bits (320), Expect = 2e-29 Identities = 75/155 (48%), Positives = 97/155 (62%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 61 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ N V Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADN-NIVI 119 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ F+E+S Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETS 154
>RAB25_MOUSE (Q9WTL2) Ras-related protein Rab-25| Length = 213 Score = 127 bits (320), Expect = 2e-29 Identities = 73/158 (46%), Positives = 100/158 (63%) Frame = +3 Query: 78 MGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDK 257 MG+ Y+ FKV+LIG+S VGK++LL F + D + TIGV+F + + +G Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRT-TIGVEFSTRTVMLGTA 59 Query: 258 KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKE 437 +K IWDTAG ER+R ITS+YYRGA G +LV+D+TK Q++ + + W KE+ H+ Sbjct: 60 AVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYA-VVERWLKELYDHA-EAT 117 Query: 438 CVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V MLVGNK D + R V TEE FA+ G LFLE+S Sbjct: 118 IVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETS 155
>RB11A_CHICK (Q5ZJN2) Ras-related protein Rab-11A| Length = 216 Score = 127 bits (320), Expect = 2e-29 Identities = 74/150 (49%), Positives = 97/150 (64%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K IWD Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIKAQIWD 66 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V MLVGN Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVIMLVGN 124 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D R V T+E AFA++ G F+E+S Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETS 154
>RB11E_LOTJA (Q40195) Ras-related protein Rab11E| Length = 218 Score = 127 bits (319), Expect = 2e-29 Identities = 76/157 (48%), Positives = 97/157 (61%) Frame = +3 Query: 81 GSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKK 260 G YD FK++LIGDS VGKS+LL F + S TIGV+F K L + K Sbjct: 3 GYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATKSLNIDGKV 61 Query: 261 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC 440 +K IWDTAGQER+R ITS+YYRGA G +LVYDVT+ +F A W KE+ H T+ Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTF-ETAGRWLKELRDH-TDPNI 119 Query: 441 VKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V ML+GNK D V+TE+G AFA++ F+E+S Sbjct: 120 VVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETS 156
>RAB25_RABIT (P46629) Ras-related protein Rab-25| Length = 213 Score = 126 bits (317), Expect = 4e-29 Identities = 73/158 (46%), Positives = 100/158 (63%) Frame = +3 Query: 78 MGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDK 257 MG+ Y+ FKV+LIG+S VGK++LL F + D + TIGV+F + + +G Sbjct: 1 MGNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRT-TIGVEFSTRTVLLGTA 59 Query: 258 KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKE 437 +K IWDTAG ER+R ITS+YYRGA G +LV+D+TK Q++ + + W KE+ H+ Sbjct: 60 AVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYA-VVERWLKELYDHA-EAT 117 Query: 438 CVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V MLVGNK D + R V TEE FA+ G LFLE+S Sbjct: 118 IVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETS 155
>RAB25_HUMAN (P57735) Ras-related protein Rab-25 (CATX-8)| Length = 213 Score = 126 bits (317), Expect = 4e-29 Identities = 73/158 (46%), Positives = 100/158 (63%) Frame = +3 Query: 78 MGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDK 257 MG+ Y+ FKV+LIG+S VGK++LL F + D + TIGV+F + + +G Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRT-TIGVEFSTRTVMLGTA 59 Query: 258 KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKE 437 +K IWDTAG ER+R ITS+YYRGA G +LV+D+TK Q++ + + W KE+ H+ Sbjct: 60 AVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYA-VVERWLKELYDHA-EAT 117 Query: 438 CVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V MLVGNK D + R V TEE FA+ G LFLE+S Sbjct: 118 IVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETS 155
>RB11C_LOTJA (Q40193) Ras-related protein Rab11C| Length = 216 Score = 126 bits (317), Expect = 4e-29 Identities = 72/150 (48%), Positives = 99/150 (66%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK++LIGDS VGKS++L F + S TIGV+F + L V K +K IWD Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKS-TIGVEFATRTLQVEGKTVKAQIWD 67 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQER+R ITS+YYRGA G +LVYD+TKRQ+F N+ W +E+ H+ + V M+ GN Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV-QRWLRELRDHA-DSNIVIMMAGN 125 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D + R V+ ++G A +++ G FLE+S Sbjct: 126 KSDLNHLRAVSEDDGGALSEKEGLSFLETS 155
>RB11A_ARATH (Q96283) Ras-related protein Rab11A| Length = 217 Score = 126 bits (317), Expect = 4e-29 Identities = 72/150 (48%), Positives = 97/150 (64%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK++LIGDS VGKS++L F + S TIGV+F + V K +K IWD Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKS-TIGVEFATRTTQVEGKTIKAQIWD 67 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQER+R ITS+YYRGA G +LVYD+TKRQ+F N+ W +E+ H+ + V M+ GN Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLR-WLRELRDHA-DSNIVIMMAGN 125 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D + R V E+G + A++ G FLE+S Sbjct: 126 KSDLNHLRSVAEEDGQSLAEKEGLSFLETS 155
>RAB12_CANFA (P51152) Ras-related protein Rab-12 (Fragment)| Length = 208 Score = 126 bits (317), Expect = 4e-29 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 5/154 (3%) Frame = +3 Query: 105 DCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDI----SPTIGVDFKIKFLTVGDKKLKLT 272 D +V++IG VGK+SL+ F TDD T+GVDFKIK + + KK++L Sbjct: 4 DFKLQVIIIGSRGVGKTSLMERF-----TDDTFCEACKSTVGVDFKIKTVELRGKKIRLQ 58 Query: 273 IWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKML 452 IWDTAGQERF +ITS+YYR A GIILVYD+TK+++F +L W K I+ ++ +++ +L Sbjct: 59 IWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPK-WMKMIDKYA-SEDAELLL 116 Query: 453 VGNKLDKDEDRMVTTEEGLAFAQQ-CGCLFLESS 551 VGNKLD + DR +T ++G FA + G F E+S Sbjct: 117 VGNKLDCETDREITRQQGEKFAHEITGMRFCEAS 150
>RGP1_ORYSA (P25766) Ras-related protein RGP1 (GTP-binding regulatory protein| RGP1) Length = 226 Score = 126 bits (317), Expect = 4e-29 Identities = 73/153 (47%), Positives = 100/153 (65%) Frame = +3 Query: 93 GSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLT 272 G D FKV+LIGDSAVGKS LL F + + D TIGV+F+ + L + + +K Sbjct: 12 GQKIDYVFKVVLIGDSAVGKSQLLAGF-ARNEFNLDSKATIGVEFQTRTLHIDARTVKAQ 70 Query: 273 IWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKML 452 DTAGQER+R +TS+YYRGA G +LVYD+TKRQSF ++A W +E+ H+ +K V ML Sbjct: 71 TRDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAR-WLEELRGHA-DKNIVIML 128 Query: 453 VGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +GNK D R+V TE+ FA++ F+E+S Sbjct: 129 IGNKSDLGTLRVVPTEDAKEFAERENLFFMETS 161
>RAB4A_BRARE (Q6PHI9) Ras-related protein Rab-4A| Length = 213 Score = 126 bits (316), Expect = 5e-29 Identities = 71/151 (47%), Positives = 98/151 (64%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK L+IG++ GKS LL F+ DD + TIGV+F K ++V +K +KL IW Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDS-NHTIGVEFGSKIISVVNKFVKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR++T SYYRGA G +LVYD+T R+++ L + W + + ++ V +L G Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTN-WLTDARM-LASQNIVIILCG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D DR VT E FAQ+ +FLE+S Sbjct: 121 NKKDLDADREVTFLEASRFAQENELMFLETS 151
>RB11B_RAT (O35509) Ras-related protein Rab-11B| Length = 217 Score = 126 bits (316), Expect = 5e-29 Identities = 74/155 (47%), Positives = 97/155 (62%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 2 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 60 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVI 118 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ F+E+S Sbjct: 119 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETS 153
>RB11B_MOUSE (P46638) Ras-related protein Rab-11B| Length = 217 Score = 126 bits (316), Expect = 5e-29 Identities = 74/155 (47%), Positives = 97/155 (62%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 2 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 60 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVI 118 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ F+E+S Sbjct: 119 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETS 153
>RB11B_HUMAN (Q15907) Ras-related protein Rab-11B (GTP-binding protein YPT3)| Length = 217 Score = 126 bits (316), Expect = 5e-29 Identities = 74/155 (47%), Positives = 97/155 (62%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 T YD FKV+LIGDS VGKS+LL F + S TIGV+F + + V K +K Sbjct: 2 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKS-TIGVEFATRSIQVDGKTIK 60 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 IWDTAGQER+R ITS+YYRGA G +LVYD+ K ++ N+ + W KE+ H+ + V Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHA-DSNIVI 118 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 MLVGNK D R V T+E AFA++ F+E+S Sbjct: 119 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETS 153
>RAB2_DICDI (P36409) Ras-related protein Rab2 (Fragment)| Length = 199 Score = 125 bits (315), Expect = 6e-29 Identities = 68/147 (46%), Positives = 95/147 (64%), Gaps = 4/147 (2%) Frame = +3 Query: 123 LLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDKKLKLTIWDTAG 290 ++IGD+ VGKS LL+ F TD P TIGV+F + +T+ +K +KL IWDTAG Sbjct: 1 IIIGDTGVGKSCLLLQF-----TDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAG 55 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QE FR+IT SYYRG+ G +LVYD+T+R +F +L W K+ ++ N +L+GNK D Sbjct: 56 QESFRSITRSYYRGSAGALLVYDITRRDTFNHLT-CWLKDARSYA-NSNMTIILIGNKSD 113 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 + R V+ EEG FA + G +FLE+S Sbjct: 114 MESKRAVSYEEGRQFADENGLIFLETS 140
>YPT31_YEAST (P38555) GTP-binding protein YPT31/YPT8 (Rab GTPase YPT31)| Length = 222 Score = 125 bits (315), Expect = 6e-29 Identities = 72/153 (47%), Positives = 95/153 (62%) Frame = +3 Query: 93 GSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLT 272 G YD FK++LIGDS VGKS+LL F D S TIGV+F + L + K++K Sbjct: 6 GYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKS-TIGVEFATRTLEIDGKRIKAQ 64 Query: 273 IWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKML 452 IWDTAGQER+R ITS+YYRGA G ++VYD++K S+ N + W E+ ++ + V L Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYEN-CNHWLSELRENADDNVAVG-L 122 Query: 453 VGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +GNK D R V TEE FAQ+ LF E+S Sbjct: 123 IGNKSDLAHLRAVPTEESKTFAQENQLLFTETS 155
>YPT3_NICPL (Q01111) Ras-related protein YPT3| Length = 218 Score = 125 bits (314), Expect = 8e-29 Identities = 73/157 (46%), Positives = 97/157 (61%) Frame = +3 Query: 81 GSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKK 260 G YD FK++LIGDS VGKS+LL F + S TIGV+F K L + +K Sbjct: 3 GYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKS-TIGVEFATKSLNIDNKV 61 Query: 261 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC 440 +K IWDTAGQER+R ITS+YYRGA G +LVYDVT+ ++ N+ W KE+ H T+ Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTR-WLKELRDH-TDPNI 119 Query: 441 VKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V ML+GNK D V+T+E A++ G F+E+S Sbjct: 120 VVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETS 156
>ARA2_ARATH (P28185) Ras-related protein ARA-2| Length = 216 Score = 125 bits (313), Expect = 1e-28 Identities = 75/157 (47%), Positives = 95/157 (60%) Frame = +3 Query: 81 GSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKK 260 G YD FK++LIGDS VGKS+LL F + S TIGV+F K V K Sbjct: 3 GYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKS-TIGVEFATKTTKVEGKV 61 Query: 261 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC 440 +K IWDTAGQER+R ITS+YYRGA G +L+YDVT+ +F N A W +E+ H T+ Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAAR-WLRELRGH-TDPNI 119 Query: 441 VKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V ML+GNK D V TEE AFA++ F+E+S Sbjct: 120 VVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETS 156
>RABA_DICDI (P34141) Ras-related protein RabA (Fragment)| Length = 199 Score = 124 bits (312), Expect = 1e-28 Identities = 69/150 (46%), Positives = 95/150 (63%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 Y+ FK + +GDS VGKSS+L+ F T+ IS TIGVDFKIK + + K +KL IWD Sbjct: 3 YEHLFKFIFVGDSGVGKSSILLRFTEDTFTESYIS-TIGVDFKIKTVYIEGKAIKLQIWD 61 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFR +S YRG H +++VYDVT ++SF N+A W +EIE ++ + +KM++GN Sbjct: 62 TAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAK-WIQEIERYARH-NVIKMIIGN 119 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D ++V FA F E+S Sbjct: 120 KSDMISQKVVDPFLAQEFADSLDITFKETS 149
>RAB4B_RAT (P51146) Ras-related protein Rab-4B| Length = 213 Score = 124 bits (311), Expect = 2e-28 Identities = 72/151 (47%), Positives = 94/151 (62%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK L+IG + GKS LL F+ D + TIGV+F + + VG K +KL IW Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDS-NHTIGVEFGSRVVNVGGKTVKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR++T SYYRGA G +LVYD+T R+++ +LA L S N V +L G Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPN--IVVILCG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D +R VT E FAQ+ +FLE+S Sbjct: 121 NKKDLDPEREVTFLEASRFAQENELMFLETS 151
>RAB4B_MOUSE (Q91ZR1) Ras-related protein Rab-4B| Length = 213 Score = 124 bits (311), Expect = 2e-28 Identities = 72/151 (47%), Positives = 94/151 (62%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK L+IG + GKS LL F+ D + TIGV+F + + VG K +KL IW Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDS-NHTIGVEFGSRVVNVGGKTVKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR++T SYYRGA G +LVYD+T R+++ +LA L S N V +L G Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPN--IVVILCG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D +R VT E FAQ+ +FLE+S Sbjct: 121 NKKDLDPEREVTFLEASRFAQENELMFLETS 151
>RAB4B_HUMAN (P61018) Ras-related protein Rab-4B| Length = 213 Score = 124 bits (311), Expect = 2e-28 Identities = 72/151 (47%), Positives = 94/151 (62%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK L+IG + GKS LL F+ D + TIGV+F + + VG K +KL IW Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDS-NHTIGVEFGSRVVNVGGKTVKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR++T SYYRGA G +LVYD+T R+++ +LA L S N V +L G Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPN--IVVILCG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D +R VT E FAQ+ +FLE+S Sbjct: 121 NKKDLDPEREVTFLEASRFAQENELMFLETS 151
>RAB4B_CANFA (P61017) Ras-related protein Rab-4B| Length = 213 Score = 124 bits (311), Expect = 2e-28 Identities = 72/151 (47%), Positives = 94/151 (62%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK L+IG + GKS LL F+ D + TIGV+F + + VG K +KL IW Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDS-NHTIGVEFGSRVVNVGGKTVKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR++T SYYRGA G +LVYD+T R+++ +LA L S N V +L G Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPN--IVVILCG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D +R VT E FAQ+ +FLE+S Sbjct: 121 NKKDLDPEREVTFLEASRFAQENELMFLETS 151
>RAB4B_BRARE (Q68EK7) Ras-related protein Rab-4B| Length = 213 Score = 124 bits (310), Expect = 2e-28 Identities = 72/151 (47%), Positives = 93/151 (61%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIW 278 +YD FK L+IG + GKS LL F+ D + TIGV+F + + VG K +KL IW Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDS-NHTIGVEFGSRVVNVGGKTVKLQIW 62 Query: 279 DTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVG 458 DTAGQERFR++T SYYRGA G +LVYD+T R+++ L + L S N V +L G Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPN--IVIILCG 120 Query: 459 NKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 NK D D DR VT E FAQ+ +FLE+S Sbjct: 121 NKKDLDADREVTFLEASRFAQENELMFLETS 151
>RAB30_MOUSE (Q923S9) Ras-related protein Rab-30| Length = 203 Score = 123 bits (309), Expect = 3e-28 Identities = 68/150 (45%), Positives = 97/150 (64%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK++LIG++ VGK+ L+ F TIGVDF IK + + +K+KL IWD Sbjct: 6 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQ-GATIGVDFMIKTVEINGEKVKLQIWD 64 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFR+IT SYYR A+ +IL YD+T +SF L + W +EIE +++NK + +LVGN Sbjct: 65 TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYASNK-VITVLVGN 122 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+D E R V+ + F++ +LE+S Sbjct: 123 KIDLAERREVSQQRAEEFSEAQDMYYLETS 152
>RAB30_HUMAN (Q15771) Ras-related protein Rab-30| Length = 203 Score = 123 bits (309), Expect = 3e-28 Identities = 68/150 (45%), Positives = 97/150 (64%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD FK++LIG++ VGK+ L+ F TIGVDF IK + + +K+KL IWD Sbjct: 6 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQ-GATIGVDFMIKTVEINGEKVKLQIWD 64 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFR+IT SYYR A+ +IL YD+T +SF L + W +EIE +++NK + +LVGN Sbjct: 65 TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYASNK-VITVLVGN 122 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+D E R V+ + F++ +LE+S Sbjct: 123 KIDLAERREVSQQRAEEFSEAQDMYYLETS 152
>RAB15_RAT (P35289) Ras-related protein Rab-15| Length = 212 Score = 122 bits (307), Expect = 5e-28 Identities = 66/150 (44%), Positives = 97/150 (64%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD F++LLIGDS VGK+ LL F IS TIGVDFK+K + V K+++ IWD Sbjct: 5 YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHIS-TIGVDFKMKTIEVDGIKVRIQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQER++TIT YYR A GI LVYD++ +S+ ++ W +++ ++ + K+L+GN Sbjct: 64 TAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMK-WVSDVDEYAP-EGVQKILIGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D+++ R V E+G A++ G F E+S Sbjct: 122 KADEEQKRQVGREQGQQLAKEYGMDFYETS 151
>RAB15_MOUSE (Q8K386) Ras-related protein Rab-15| Length = 212 Score = 122 bits (307), Expect = 5e-28 Identities = 66/150 (44%), Positives = 97/150 (64%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD F++LLIGDS VGK+ LL F IS TIGVDFK+K + V K+++ IWD Sbjct: 5 YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHIS-TIGVDFKMKTIDVDGIKVRIQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQER++TIT YYR A GI LVYD++ +S+ ++ W +++ ++ + K+L+GN Sbjct: 64 TAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMK-WVSDVDEYAP-EGVQKILIGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D+++ R V E+G A++ G F E+S Sbjct: 122 KADEEQKRQVGREQGQQLAKEYGMDFYETS 151
>RAB15_HUMAN (P59190) Ras-related protein Rab-15| Length = 212 Score = 122 bits (307), Expect = 5e-28 Identities = 66/150 (44%), Positives = 97/150 (64%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD F++LLIGDS VGK+ LL F IS TIGVDFK+K + V K+++ IWD Sbjct: 5 YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHIS-TIGVDFKMKTIEVDGIKVRIQIWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQER++TIT YYR A GI LVYD++ +S+ ++ W +++ ++ + K+L+GN Sbjct: 64 TAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMK-WVSDVDEYAP-EGVQKILIGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D+++ R V E+G A++ G F E+S Sbjct: 122 KADEEQKRQVGREQGQQLAKEYGMDFYETS 151
>RABC_DICDI (P34143) Ras-related protein RabC| Length = 196 Score = 121 bits (304), Expect = 1e-27 Identities = 68/150 (45%), Positives = 98/150 (65%), Gaps = 4/150 (2%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKK----LKLTIWD 281 +K++L+G+S VGKSS+LV F +PT+GVDF +K T+ +K+ +KL +WD Sbjct: 7 YKIILVGESGVGKSSILVRFTDNT-FSQHFAPTLGVDFNVK--TIRNKETGQTVKLQLWD 63 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERF++IT ++YRG+HG+I+VYDVT +SF L + W ++I + T + +LVGN Sbjct: 64 TAGQERFKSITQTFYRGSHGVIVVYDVTDPKSFERLKN-WVEDINQY-TQDGMIIILVGN 121 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D R VT E+G A+Q FLE S Sbjct: 122 KSDMVAQRKVTFEQGQEMAEQLKTKFLEVS 151
>YPT32_YEAST (P51996) GTP-binding protein YPT32/YPT11 (Rab GTPase YPT32)| Length = 221 Score = 121 bits (304), Expect = 1e-27 Identities = 71/156 (45%), Positives = 97/156 (62%), Gaps = 3/156 (1%) Frame = +3 Query: 93 GSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDD---DISPTIGVDFKIKFLTVGDKKL 263 G YD FK++LIGDS VGKS+LL F TD+ + TIGV+F + + V +KK+ Sbjct: 6 GYDYDYLFKIVLIGDSGVGKSNLLSRFT----TDEFNIESKSTIGVEFATRTIEVENKKI 61 Query: 264 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 443 K IWDTAGQER+R ITS+YYRGA G ++VYD++K S+ N + W E+ ++ + V Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYEN-CNHWLTELRENADDNVAV 120 Query: 444 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 L+GNK D R V T+E FA + LF E+S Sbjct: 121 G-LIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETS 155
>RAB19_MOUSE (P35294) Ras-related protein Rab-19| Length = 217 Score = 121 bits (303), Expect = 1e-27 Identities = 70/150 (46%), Positives = 95/150 (63%), Gaps = 1/150 (0%) Frame = +3 Query: 105 DCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDT 284 D FKV+LIGDS VGK+ ++ F S ++ + TIGVDF ++ L + KK+K+ +WDT Sbjct: 15 DYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQN-TIGVDFTVRSLEIDGKKVKMQVWDT 73 Query: 285 AGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNK 464 AGQERFRTIT SYYR AH I+ YD+T+R +F ++ W EIE + V ML+GNK Sbjct: 74 AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPH-WIHEIEKYGA-ANLVIMLIGNK 131 Query: 465 LDKDEDRMVTTEEGLAFAQQCGCL-FLESS 551 D E R V E+ A++ G L LE+S Sbjct: 132 SDLWEKRHVLFEDACTLAEKHGLLAVLETS 161
>RAB12_RAT (P35284) Ras-related protein Rab-12 (Fragment)| Length = 197 Score = 119 bits (299), Expect = 4e-27 Identities = 66/136 (48%), Positives = 92/136 (67%), Gaps = 4/136 (2%) Frame = +3 Query: 129 IGDSAVGKSSLLVSFVSAAPTDDDI----SPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 IG VGK+SL+ F TDD T+GVDFKIK + + KK++L IWDTAGQE Sbjct: 1 IGSRGVGKTSLMERF-----TDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 55 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 RF +ITS+YYR A GIILVYD+TK+++F +L W K I+ ++ +++ +L GNKLD + Sbjct: 56 RFNSITSAYYRSAKGIILVYDITKKETFDDLPK-WMKMIDKYA-SEDAELLLAGNKLDCE 113 Query: 477 EDRMVTTEEGLAFAQQ 524 DR ++ ++G FAQQ Sbjct: 114 TDREISRQQGEKFAQQ 129
>RAB17_MOUSE (P35292) Ras-related protein Rab-17| Length = 214 Score = 119 bits (298), Expect = 6e-27 Identities = 62/145 (42%), Positives = 94/145 (64%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 K++L+G S+VGK+SL + ++ ++ PT+G F K L +G LKL IWDTAGQE Sbjct: 21 KLVLLGSSSVGKTSLALRYMKQ--DFSNVLPTVGCAFFTKVLDLGSSSLKLEIWDTAGQE 78 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 +++++ Y+RGA+ +LVYD+T++ SF + A W +++E E V MLVGNK D Sbjct: 79 KYQSVCHLYFRGANAALLVYDITRKDSF-HKAQQWLEDLEKEFQPGEVVVMLVGNKTDLG 137 Query: 477 EDRMVTTEEGLAFAQQCGCLFLESS 551 E+R VT +EG FA+ LF+E+S Sbjct: 138 EEREVTFQEGKEFAESKSLLFMETS 162
>RB11A_TOBAC (Q40523) Ras-related protein Rab11A| Length = 216 Score = 119 bits (298), Expect = 6e-27 Identities = 71/158 (44%), Positives = 96/158 (60%) Frame = +3 Query: 78 MGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDK 257 M + YD FK++LIGDS VGKS++L F + S TIGV+F + L V K Sbjct: 1 MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKS-TIGVEFATRTLQVEGK 59 Query: 258 KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKE 437 +K IWDTAGQER+R ITS+YYRGA G +L YD+TKRQ+F N+ W +E+ H + Sbjct: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNV-QRWLRELRDH-RDSN 117 Query: 438 CVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 V +L GNK D R V+ ++ A ++ G FLE+S Sbjct: 118 IVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETS 155
>YPT4_SCHPO (O13876) GTP-binding protein ypt4| Length = 234 Score = 119 bits (298), Expect = 6e-27 Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 4/146 (2%) Frame = +3 Query: 99 SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVG----DKKLK 266 SYD K++L G S GKS LL FV DD +S T+G+DF + ++VG K++K Sbjct: 5 SYDYLVKIVLAGPSGTGKSCLLQRFVKNQ-WDDQVSHTVGIDFASRIISVGMGNQQKRIK 63 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L IWDTAGQE+FR++ +YYRGA G +LVYDVT + SF L+ W +I + + CV Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSS-WLSDIRAMAPSTICV- 121 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQ 524 +L G+K D R V+TEE F + Sbjct: 122 VLAGSKSDLQNQRQVSTEEAAEFCSE 147
>RAB17_HUMAN (Q9H0T7) Ras-related protein Rab-17| Length = 212 Score = 118 bits (295), Expect = 1e-26 Identities = 72/172 (41%), Positives = 100/172 (58%) Frame = +3 Query: 36 RAIRSPPPRPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTI 215 +A R+P PR A S P FK++L+G +VGKSSL + +V I PT+ Sbjct: 3 QAHRTPQPR----AAPSQPRV-----FKLVLLGSGSVGKSSLALRYVKN--DFKSILPTV 51 Query: 216 GVDFKIKFLTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLAD 395 G F K + VG LKL IWDTAGQE++ ++ Y+RGA+ +LVYD+T++ SF A Sbjct: 52 GCAFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLK-AQ 110 Query: 396 VWAKEIELHSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 W K++E E + MLVGNK D ++R VT +EG FA LF+E+S Sbjct: 111 QWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETS 162
>RB39A_MOUSE (Q8BHD0) Ras-related protein Rab-39A (Rab-39)| Length = 217 Score = 117 bits (294), Expect = 2e-26 Identities = 66/153 (43%), Positives = 95/153 (62%), Gaps = 7/153 (4%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSA------APTDDDISPTIGVDFKIKFLTVGD-KKLKLT 272 F++++IGDS VGKS LL F +P D PT+GVDF + L + K++KL Sbjct: 9 FRLIVIGDSTVGKSCLLHRFTQGRFPGLHSPACD---PTVGVDFFSRLLEIEPGKRIKLQ 65 Query: 273 IWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKML 452 +WDTAGQERFR+IT SYYR + G LV+D+T R+SF ++ D W +E ++H + V +L Sbjct: 66 LWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKD-WLEEAKMHVQPFQIVFLL 124 Query: 453 VGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 VG+K D R V+ EE + CG ++E+S Sbjct: 125 VGHKCDLASQRQVSREEAERLSTDCGMKYIETS 157
>RB40B_HUMAN (Q12829) Ras-related protein Rab-40B (SOCS box-containing protein| RAR) (Rar protein) Length = 278 Score = 116 bits (290), Expect = 5e-26 Identities = 69/160 (43%), Positives = 94/160 (58%) Frame = +3 Query: 72 AAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVG 251 +A+GS P +YD K LL+GDS VGK +L S A P G+D+K + + Sbjct: 2 SALGS-PVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPA-GIDYKTTTILLD 59 Query: 252 DKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 431 +++KL +WDT+GQ RF TI SY RGA G+ILVYD+ R SF + D W KEI+ H+ Sbjct: 60 GRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGI-DRWIKEIDEHAPG 118 Query: 432 KECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+LVGN+L R V TE+ A+A++ G F E S Sbjct: 119 --VPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVS 156
>RAB12_MOUSE (P35283) Ras-related protein Rab-12 (Rab-13) (Fragment)| Length = 191 Score = 116 bits (290), Expect = 5e-26 Identities = 64/130 (49%), Positives = 90/130 (69%), Gaps = 4/130 (3%) Frame = +3 Query: 147 GKSSLLVSFVSAAPTDDDI----SPTIGVDFKIKFLTVGDKKLKLTIWDTAGQERFRTIT 314 GK+SL+ F TDD T+GVDFKIK + + KK++L IWDTAGQERF +IT Sbjct: 1 GKTSLMERF-----TDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSIT 55 Query: 315 SSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKDEDRMVT 494 S+YYR A GIILVYD+TK+++F +L W K I+ ++ +++ +LVGNKLD + DR ++ Sbjct: 56 SAYYRSAKGIILVYDITKKETFDDLPK-WMKMIDKYA-SEDAELLLVGNKLDCETDREIS 113 Query: 495 TEEGLAFAQQ 524 ++G FAQQ Sbjct: 114 RQQGEKFAQQ 123
>RB39A_HUMAN (Q14964) Ras-related protein Rab-39A (Rab-39)| Length = 217 Score = 116 bits (290), Expect = 5e-26 Identities = 66/153 (43%), Positives = 94/153 (61%), Gaps = 7/153 (4%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSA------APTDDDISPTIGVDFKIKFLTVGD-KKLKLT 272 F++++IGDS VGKS LL F +P D PT+GVDF + L + K++KL Sbjct: 9 FRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACD---PTVGVDFFSRLLEIEPGKRIKLQ 65 Query: 273 IWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKML 452 +WDTAGQERFR+IT SYYR + G LV+D+T R+SF ++ D W +E +++ V +L Sbjct: 66 LWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKD-WLEEAKMYVQPFRIVFLL 124 Query: 453 VGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 VG+K D R VT EE + CG ++E+S Sbjct: 125 VGHKCDLASQRQVTREEAEKLSADCGMKYIETS 157
>RAB5B_MOUSE (P61021) Ras-related protein Rab-5B| Length = 215 Score = 115 bits (287), Expect = 1e-25 Identities = 65/154 (42%), Positives = 91/154 (59%) Frame = +3 Query: 90 PGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKL 269 P +S C FK++L+G+SAVGKSSL++ FV + S TIG F + + + D +K Sbjct: 13 PQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES-TIGAAFLTQSVCLDDTTVKF 71 Query: 270 TIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKM 449 IWDTAGQER+ ++ YYRGA I+VYD+T +++F A W KE++ + V Sbjct: 72 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFAR-AKTWVKELQ-RQASPSIVIA 129 Query: 450 LVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 L GNK D RMV EE A+A LF+E+S Sbjct: 130 LAGNKADLANKRMVEYEEAQAYADDNSLLFMETS 163
>RAB5B_HUMAN (P61020) Ras-related protein Rab-5B| Length = 215 Score = 115 bits (287), Expect = 1e-25 Identities = 65/154 (42%), Positives = 91/154 (59%) Frame = +3 Query: 90 PGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKL 269 P +S C FK++L+G+SAVGKSSL++ FV + S TIG F + + + D +K Sbjct: 13 PQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES-TIGAAFLTQSVCLDDTTVKF 71 Query: 270 TIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKM 449 IWDTAGQER+ ++ YYRGA I+VYD+T +++F A W KE++ + V Sbjct: 72 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFAR-AKTWVKELQ-RQASPSIVIA 129 Query: 450 LVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 L GNK D RMV EE A+A LF+E+S Sbjct: 130 LAGNKADLANKRMVEYEEAQAYADDNSLLFMETS 163
>YPT6_YEAST (Q99260) GTP-binding protein YPT6| Length = 215 Score = 114 bits (286), Expect = 1e-25 Identities = 58/147 (39%), Positives = 95/147 (64%), Gaps = 1/147 (0%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 +K++ +G+ VGK+SL+ F+ DD TIG+DF K + + DK ++L +WDTAGQ Sbjct: 11 YKIVFLGEQGVGKTSLITRFMYDT-FDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ 69 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFR++ SY R + I+VYD+TKR+SF + D W ++++ ++ + +VGNK D Sbjct: 70 ERFRSLIPSYIRDSRVAIIVYDITKRKSFEYI-DKWIEDVKNERGDENVILCIVGNKSDL 128 Query: 474 DEDRMVTTEEGLAFAQQCGC-LFLESS 551 ++R ++TEEG A+ G +F+E+S Sbjct: 129 SDERQISTEEGEKKAKLLGAKIFMETS 155
>RB39B_MOUSE (Q8BHC1) Ras-related protein Rab-39B| Length = 213 Score = 114 bits (285), Expect = 2e-25 Identities = 64/149 (42%), Positives = 94/149 (63%), Gaps = 3/149 (2%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSA--APTDDDISPTIGVDFKIKFLTVGD-KKLKLTIWDT 284 F++++IGDS VGKS L+ F A D PT+GVDF + + + K++KL IWDT Sbjct: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSD---PTVGVDFFSRLVEIEPGKRIKLQIWDT 65 Query: 285 AGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNK 464 AGQERFR+IT +YYR + G +L++D+T R+SF N+ + W +E ++H + V +LVG+K Sbjct: 66 AGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHE-WLEETKVHVQPYQIVFVLVGHK 124 Query: 465 LDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D D R VT E A G ++E+S Sbjct: 125 CDLDTQRQVTRHEAEKLAAAYGMKYIETS 153
>RB39B_HUMAN (Q96DA2) Ras-related protein Rab-39B| Length = 213 Score = 114 bits (285), Expect = 2e-25 Identities = 64/149 (42%), Positives = 94/149 (63%), Gaps = 3/149 (2%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSA--APTDDDISPTIGVDFKIKFLTVGD-KKLKLTIWDT 284 F++++IGDS VGKS L+ F A D PT+GVDF + + + K++KL IWDT Sbjct: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSD---PTVGVDFFSRLVEIEPGKRIKLQIWDT 65 Query: 285 AGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNK 464 AGQERFR+IT +YYR + G +L++D+T R+SF N+ + W +E ++H + V +LVG+K Sbjct: 66 AGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHE-WLEETKVHVQPYQIVFVLVGHK 124 Query: 465 LDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D D R VT E A G ++E+S Sbjct: 125 CDLDTQRQVTRHEAEKLAAAYGMKYIETS 153
>VPS21_YEAST (P36017) Vacuolar protein sorting-associated protein 21| (GTP-binding protein YPT51) Length = 210 Score = 114 bits (284), Expect = 2e-25 Identities = 65/150 (43%), Positives = 94/150 (62%), Gaps = 3/150 (2%) Frame = +3 Query: 111 SFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAG 290 S K++L+G++AVGKSS+++ FVS ++ PTIG F + +T+ + +K IWDTAG Sbjct: 7 SIKLVLLGEAAVGKSSIVLRFVSNDFAENK-EPTIGAAFLTQRVTINEHTVKFEIWDTAG 65 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QERF ++ YYR A ++VYDVTK QSF A W KE+ +K+ + LVGNK+D Sbjct: 66 QERFASLAPMYYRNAQAALVVYDVTKPQSFIK-ARHWVKELH-EQASKDIIIALVGNKID 123 Query: 471 ---KDEDRMVTTEEGLAFAQQCGCLFLESS 551 + +R V EEG A++ G LF E+S Sbjct: 124 MLQEGGERKVAREEGEKLAEEKGLLFFETS 153
>RB33A_MOUSE (P97950) Ras-related protein Rab-33A (Small GTP-binding protein| S10) Length = 237 Score = 113 bits (283), Expect = 3e-25 Identities = 64/147 (43%), Positives = 85/147 (57%), Gaps = 1/147 (0%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK+++IGDS VGK+ L F D TIGVDF+ K + + +K+K+ +WDTAGQ Sbjct: 37 FKIIVIGDSNVGKTCLTFRFCGGT-FPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQ 95 Query: 294 ERFR-TITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 ERFR ++ YYR H ++ VYDVTK SFTNL +W +E H+ K+LVGNK D Sbjct: 96 ERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNL-KMWIQECNGHAVPPLVPKVLVGNKCD 154 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 E V + L FA L E+S Sbjct: 155 LREQIQVPSNLALKFADAHNMLLFETS 181
>RB33A_HUMAN (Q14088) Ras-related protein Rab-33A (Small GTP-binding protein| S10) Length = 237 Score = 113 bits (283), Expect = 3e-25 Identities = 64/147 (43%), Positives = 85/147 (57%), Gaps = 1/147 (0%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK+++IGDS VGK+ L F D TIGVDF+ K + + +K+K+ +WDTAGQ Sbjct: 37 FKIIVIGDSNVGKTCLTFRFCGGT-FPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQ 95 Query: 294 ERFR-TITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 ERFR ++ YYR H ++ VYDVTK SFTNL +W +E H+ K+LVGNK D Sbjct: 96 ERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNL-KMWIQECNGHAVPPLVPKVLVGNKCD 154 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 E V + L FA L E+S Sbjct: 155 LREQIQVPSNLALKFADAHNMLLFETS 181
>RB40C_HUMAN (Q96S21) Ras-related protein Rab-40C (SOCS box containing protein| RAR3) (Rar-like protein) Length = 281 Score = 112 bits (280), Expect = 7e-25 Identities = 68/160 (42%), Positives = 95/160 (59%), Gaps = 2/160 (1%) Frame = +3 Query: 78 MGS--TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVG 251 MGS +P SYD K LL+GDS VGK +L S A + + + G+D+K + + Sbjct: 1 MGSQGSPVKSYDYLLKFLLVGDSDVGKGEILESLQDGA-AESPYAYSNGIDYKTTTILLD 59 Query: 252 DKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 431 +++KL +WDT+GQ RF TI SY RGA GI+LVYD+T R SF + D W KEI+ H+ Sbjct: 60 GRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGI-DRWIKEIDEHAPG 118 Query: 432 KECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ++LVGN+L R V TE+ A+A++ F E S Sbjct: 119 --VPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVS 156
>RAB31_RAT (Q6GQP4) Ras-related protein Rab-31 (GTP-binding protein Rab0)| Length = 194 Score = 112 bits (279), Expect = 9e-25 Identities = 61/145 (42%), Positives = 87/145 (60%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV L+GD+ VGKSS++ FV D +ISPTIG F K + G++ K IWDTAGQE Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDH-FDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 RF ++ YYRG+ ++VYD+TK+ SF L W KE++ H + V + GNK D Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKK-WVKELKEHGP-ENIVMAIAGNKCDLS 123 Query: 477 EDRMVTTEEGLAFAQQCGCLFLESS 551 + R V ++ +A+ G L +E+S Sbjct: 124 DIREVPLKDAKEYAESIGALVVETS 148
>RB40A_HUMAN (Q8WXH6) Ras-related protein Rab-40A (SOCS box containing protein| RAR2A) (Rar-2 protein) Length = 277 Score = 112 bits (279), Expect = 9e-25 Identities = 65/155 (41%), Positives = 90/155 (58%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 +P +YD K LL+GD VGKS +L S A + S G+D+K + + +++K Sbjct: 6 SPDQAYDFLLKFLLVGDRDVGKSEILESLQDGA-AESPYSHLGGIDYKTTTILLDGQRVK 64 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L +WDT+GQ RF TI SY RGA G+ILVYD+ R SF + D W K+IE H+ K Sbjct: 65 LKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGM-DRWIKKIEEHAPG--VPK 121 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +LVGN+L R V E+ A+A++ G F E S Sbjct: 122 ILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVS 156
>RAB11_DICDI (P36412) Ras-related protein Rab11| Length = 214 Score = 111 bits (278), Expect = 1e-24 Identities = 63/150 (42%), Positives = 95/150 (63%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 YD +K++LIGDS VGKS+LL F + + S TIGV+F + + K +K +WD Sbjct: 10 YDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKS-TIGVEFATRTIQTEGKTIKAQVWD 68 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQER+R ITS+YYRGA G +LVYD+ K+ ++ ++ + W E+ + ++ MLVGN Sbjct: 69 TAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSV-ERWILELR-ENADRNIEIMLVGN 126 Query: 462 KLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D R V+T+E F+++ F+E+S Sbjct: 127 KSDLRHLREVSTDEAKEFSEKHKLTFIETS 156
>RB40C_MOUSE (Q8VHQ4) Ras-related protein Rab-40C (SOCS box containing protein| RAR3) Length = 281 Score = 111 bits (278), Expect = 1e-24 Identities = 65/155 (41%), Positives = 92/155 (59%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 +P SYD K LL+GDS VGK +L S A + + + G+D+K + + +++K Sbjct: 6 SPVKSYDYLLKFLLVGDSDVGKGEILESLQDGA-AESPYAYSNGIDYKTTTILLDGRRVK 64 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L +WDT+GQ RF TI SY RGA GI+LVYD+T R SF + D W KEI+ H+ + Sbjct: 65 LELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGI-DRWIKEIDEHAPG--VPR 121 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +LVGN+L R V TE+ A+A++ F E S Sbjct: 122 ILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVS 156
>RAB21_MOUSE (P35282) Ras-related protein Rab-21 (Rab-12)| Length = 221 Score = 111 bits (278), Expect = 1e-24 Identities = 62/161 (38%), Positives = 95/161 (59%) Frame = +3 Query: 69 AAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTV 248 AA G+ + SFKV+L+G+ VGK+SL++ + D I+ T+ F K L + Sbjct: 2 AAGGGAAAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNI 60 Query: 249 GDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHST 428 G K++ L IWDTAGQERF + YYR ++G ILVYDVT SF + + W KE+ Sbjct: 61 GGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKN-WVKELRKMLG 119 Query: 429 NKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 N+ C+ +VGNK+D +++R V+ +E ++A+ G +S Sbjct: 120 NEICL-CIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTS 159
>RB40B_MOUSE (Q8VHP8) Ras-related protein Rab-40B (SOCS box containing protein| RAR) Length = 278 Score = 111 bits (277), Expect = 2e-24 Identities = 66/160 (41%), Positives = 93/160 (58%) Frame = +3 Query: 72 AAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVG 251 +++GS P +YD K LL+GDS VGK +L S A P G+D K + + Sbjct: 2 SSLGS-PVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPA-GIDHKTTTILLD 59 Query: 252 DKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 431 +++KL +WDT+GQ RF TI SY RGA G++LVYD+ R SF + + W KEI+ H+ Sbjct: 60 GRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGI-NRWIKEIDEHAPG 118 Query: 432 KECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 K+LVGN+L R V TE+ A+A++ G F E S Sbjct: 119 --VPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVS 156
>RAB31_MOUSE (Q921E2) Ras-related protein Rab-31| Length = 194 Score = 111 bits (277), Expect = 2e-24 Identities = 60/145 (41%), Positives = 87/145 (60%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV L+GD+ VGKSS++ FV D +ISPTIG F K + G++ K IWDTAGQE Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDH-FDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 RF ++ YYRG+ ++VYD+TK+ SF L W KE++ H + V + GNK D Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKK-WVKELKEHGP-ENIVMAIAGNKCDLS 123 Query: 477 EDRMVTTEEGLAFAQQCGCLFLESS 551 + R V ++ +A+ G + +E+S Sbjct: 124 DIREVPLKDAKEYAESIGAIVVETS 148
>RAB31_HUMAN (Q13636) Ras-related protein Rab-31 (Rab-22B)| Length = 194 Score = 111 bits (277), Expect = 2e-24 Identities = 60/145 (41%), Positives = 87/145 (60%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV L+GD+ VGKSS++ FV D +ISPTIG F K + G++ K IWDTAGQE Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDH-FDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 RF ++ YYRG+ ++VYD+TK+ SF L W KE++ H + V + GNK D Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKK-WVKELKEHGP-ENIVMAIAGNKCDLS 123 Query: 477 EDRMVTTEEGLAFAQQCGCLFLESS 551 + R V ++ +A+ G + +E+S Sbjct: 124 DIREVPLKDAKEYAESIGAIVVETS 148
>RAB5C_BOVIN (Q58DS9) Ras-related protein Rab-5C| Length = 216 Score = 110 bits (276), Expect = 2e-24 Identities = 65/164 (39%), Positives = 91/164 (55%) Frame = +3 Query: 60 RPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKF 239 R GAA + C FK++L+G+SAVGKSSL++ FV + S TIG F + Sbjct: 4 RGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES-TIGAAFLTQT 62 Query: 240 LTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIEL 419 + + D +K IWDTAGQER+ ++ YYRGA I+VYD+T +F A W KE++ Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQ- 120 Query: 420 HSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + V L GNK D R V +E A+A+ LF+E+S Sbjct: 121 RQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETS 164
>RAB33_CAEEL (Q20365) Ras-related protein Rab-33| Length = 307 Score = 110 bits (276), Expect = 2e-24 Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 5/186 (2%) Frame = +3 Query: 9 HPTNPPARTRAIRSPP--PRPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSA 182 +PT PP A + P+ A A ST +FKV+++G++AVGK+ L F Sbjct: 64 YPTAPPPIPPAPEAVTAGPKKMALAPSSTKTYKQKRTFKVIIVGNAAVGKTCLSFRFCCG 123 Query: 183 APTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQERFR-TITSSYYRGAHGIILVYD 359 + TIGVDF+ + + ++ L++ +WDTAGQER+R +I + YYR + ++ VYD Sbjct: 124 R-FPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERYRQSIVAHYYRNVNAVVFVYD 182 Query: 360 VTKRQSFTNLADVWAKEIELHST--NKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGC 533 VT R+SF +LA +W KE E H + E ++L+GNK D + V+T+E FA + Sbjct: 183 VTCRESFNDLA-LWIKECEKHGLVGDSEVPRILIGNKCDVECTNRVSTDEAQMFADRNNM 241 Query: 534 LFLESS 551 E+S Sbjct: 242 ALFETS 247
>RAB21_CANFA (P55745) Ras-related protein Rab-21| Length = 222 Score = 110 bits (276), Expect = 2e-24 Identities = 61/157 (38%), Positives = 94/157 (59%) Frame = +3 Query: 81 GSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKK 260 G G +Y SFKV+L+G+ VGK+SL++ + D I+ T+ F K L +G K+ Sbjct: 8 GGAAGRAY--SFKVVLLGEGCVGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLNIGGKR 64 Query: 261 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC 440 + L IWDTAGQERF + YYR ++G ILVYD+T SF + + W KE+ N+ C Sbjct: 65 VNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKELRKMLGNEIC 123 Query: 441 VKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + +VGNK+D +++R V+ +E ++A+ G +S Sbjct: 124 L-CIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTS 159
>RB40L_HUMAN (P0C0E4) Ras-related protein Rab-40A-like| Length = 278 Score = 110 bits (275), Expect = 3e-24 Identities = 64/155 (41%), Positives = 89/155 (57%) Frame = +3 Query: 87 TPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLK 266 +P +YD K LL+GD VGKS +L S + S G+D+K + + +++K Sbjct: 6 SPDQAYDFLLKFLLVGDRDVGKSEILESLQDGT-AESPYSHLGGIDYKTTTILLDGQRVK 64 Query: 267 LTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK 446 L +WDT+GQ RF TI SY RGA G+ILVYD+ R SF + D W K+IE H+ K Sbjct: 65 LKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGM-DRWIKKIEEHAPG--VPK 121 Query: 447 MLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +LVGN+L R V E+ A+A++ G F E S Sbjct: 122 ILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVS 156
>RAB21_HUMAN (Q9UL25) Ras-related protein Rab-21| Length = 224 Score = 110 bits (274), Expect = 3e-24 Identities = 63/162 (38%), Positives = 95/162 (58%) Frame = +3 Query: 66 GAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLT 245 GAAA G SFKV+L+G+ VGK+SL++ + D I+ T+ F K L Sbjct: 9 GAAAAGRA------YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHIT-TLQASFLTKKLN 61 Query: 246 VGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHS 425 +G K++ L IWDTAGQERF + YYR ++G ILVYD+T SF + + W KE+ Sbjct: 62 IGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKELRKML 120 Query: 426 TNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 N+ C+ +VGNK+D +++R V+ +E ++A+ G +S Sbjct: 121 GNEICL-CIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTS 161
>RAB5C_MOUSE (P35278) Ras-related protein Rab-5C| Length = 216 Score = 110 bits (274), Expect = 3e-24 Identities = 65/164 (39%), Positives = 90/164 (54%) Frame = +3 Query: 60 RPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKF 239 R GAA + C FK++L+G+SAVGKSSL++ FV + S TIG F + Sbjct: 4 RGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES-TIGAAFLTQT 62 Query: 240 LTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIEL 419 + + D +K IWDTAGQER+ ++ YYRGA I+VYD+T +F A W KE++ Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQ- 120 Query: 420 HSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + V L GNK D R V +E A+A LF+E+S Sbjct: 121 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETS 164
>RAB5C_HUMAN (P51148) Ras-related protein Rab-5C (RAB5L) (L1880)| Length = 216 Score = 110 bits (274), Expect = 3e-24 Identities = 65/164 (39%), Positives = 90/164 (54%) Frame = +3 Query: 60 RPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKF 239 R GAA + C FK++L+G+SAVGKSSL++ FV + S TIG F + Sbjct: 4 RGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES-TIGAAFLTQT 62 Query: 240 LTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIEL 419 + + D +K IWDTAGQER+ ++ YYRGA I+VYD+T +F A W KE++ Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQ- 120 Query: 420 HSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + V L GNK D R V +E A+A LF+E+S Sbjct: 121 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETS 164
>RAB5C_CANFA (P51147) Ras-related protein Rab-5C| Length = 216 Score = 110 bits (274), Expect = 3e-24 Identities = 65/164 (39%), Positives = 90/164 (54%) Frame = +3 Query: 60 RPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKF 239 R GAA + C FK++L+G+SAVGKSSL++ FV + S TIG F + Sbjct: 4 RGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQES-TIGAAFLTQT 62 Query: 240 LTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIEL 419 + + D +K IWDTAGQER+ ++ YYRGA I+VYD+T +F A W KE++ Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQ- 120 Query: 420 HSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + V L GNK D R V +E A+A LF+E+S Sbjct: 121 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETS 164
>RAB5A_MOUSE (Q9CQD1) Ras-related protein Rab-5A| Length = 215 Score = 107 bits (267), Expect = 2e-23 Identities = 61/148 (41%), Positives = 86/148 (58%) Frame = +3 Query: 108 CSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTA 287 C FK++L+G+SAVGKSSL++ FV + S TIG F + + + D +K IWDTA Sbjct: 19 CQFKLVLLGESAVGKSSLVLRFVKGQFHEFQES-TIGAAFLTQTVCLDDTTVKFEIWDTA 77 Query: 288 GQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKL 467 GQER+ ++ YYRGA I+VYD+T +SF A W KE++ + V L GNK Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQ-RQASPNIVIALSGNKA 135 Query: 468 DKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D R V +E ++A LF+E+S Sbjct: 136 DLANKRAVDFQEAQSYADDNSLLFMETS 163
>RAB5A_MACFA (P61271) Ras-related protein Rab-5A| Length = 215 Score = 107 bits (267), Expect = 2e-23 Identities = 61/148 (41%), Positives = 86/148 (58%) Frame = +3 Query: 108 CSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTA 287 C FK++L+G+SAVGKSSL++ FV + S TIG F + + + D +K IWDTA Sbjct: 19 CQFKLVLLGESAVGKSSLVLRFVKGQFHEFQES-TIGAAFLTQTVCLDDTTVKFEIWDTA 77 Query: 288 GQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKL 467 GQER+ ++ YYRGA I+VYD+T +SF A W KE++ + V L GNK Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQ-RQASPNIVIALSGNKA 135 Query: 468 DKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D R V +E ++A LF+E+S Sbjct: 136 DLANKRAVDFQEAQSYADDNSLLFMETS 163
>RAB5A_HUMAN (P20339) Ras-related protein Rab-5A| Length = 215 Score = 107 bits (267), Expect = 2e-23 Identities = 61/148 (41%), Positives = 86/148 (58%) Frame = +3 Query: 108 CSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTA 287 C FK++L+G+SAVGKSSL++ FV + S TIG F + + + D +K IWDTA Sbjct: 19 CQFKLVLLGESAVGKSSLVLRFVKGQFHEFQES-TIGAAFLTQTVCLDDTTVKFEIWDTA 77 Query: 288 GQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKL 467 GQER+ ++ YYRGA I+VYD+T +SF A W KE++ + V L GNK Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQ-RQASPNIVIALSGNKA 135 Query: 468 DKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D R V +E ++A LF+E+S Sbjct: 136 DLANKRAVDFQEAQSYADDNSLLFMETS 163
>RAB5A_CANFA (P18066) Ras-related protein Rab-5A| Length = 215 Score = 107 bits (267), Expect = 2e-23 Identities = 61/148 (41%), Positives = 86/148 (58%) Frame = +3 Query: 108 CSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTA 287 C FK++L+G+SAVGKSSL++ FV + S TIG F + + + D +K IWDTA Sbjct: 19 CQFKLVLLGESAVGKSSLVLRFVKGQFHEFQES-TIGAAFLTQTVCLDDTTVKFEIWDTA 77 Query: 288 GQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKL 467 GQER+ ++ YYRGA I+VYD+T +SF A W KE++ + V L GNK Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQ-RQASPNIVIALSGNKA 135 Query: 468 DKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D R V +E ++A LF+E+S Sbjct: 136 DLANKRAVDFQEAQSYADDNSLLFMETS 163
>RHN1_NICPL (P31583) Ras-related protein RHN1| Length = 200 Score = 107 bits (266), Expect = 3e-23 Identities = 60/145 (41%), Positives = 83/145 (57%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 K++L+GD GKSSL++ FV + S TIG F L V + +K IWDTAGQE Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQES-TIGAAFFSSTLAVNNATVKFEIWDTAGQE 70 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 R+ ++ YYRGA I+VYD+T SF A W +E++ N V L GNK D + Sbjct: 71 RYHSLAPMYYRGAAAAIIVYDITSSDSFAR-AKKWVQELQKQG-NPNMVMALAGNKADLE 128 Query: 477 EDRMVTTEEGLAFAQQCGCLFLESS 551 + R VT EE +A++ G F+E+S Sbjct: 129 DRRKVTAEEARLYAEENGLFFMETS 153
>RB22A_HUMAN (Q9UL26) Ras-related protein Rab-22A (Rab-22)| Length = 194 Score = 106 bits (264), Expect = 5e-23 Identities = 59/145 (40%), Positives = 85/145 (58%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV L+GD+ VGKSS++ FV + D +I+PTIG F K + ++ K IWDTAGQE Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDS-FDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 RFR + YYRG+ I+VYD+TK ++F+ L + W KE+ H V + GNK D Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKN-WVKELRQHGP-PNIVVAIAGNKCDLI 123 Query: 477 EDRMVTTEEGLAFAQQCGCLFLESS 551 + R V + +A +F+E+S Sbjct: 124 DVREVMERDAKDYADSIHAIFVETS 148
>RB27A_HUMAN (P51159) Ras-related protein Rab-27A (Rab-27) (GTP-binding protein| Ram) Length = 221 Score = 106 bits (264), Expect = 5e-23 Identities = 58/160 (36%), Positives = 98/160 (61%), Gaps = 10/160 (6%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLT---------VG- 251 YD K L +GDS VGK+S+L + I+ T+G+DF+ K + VG Sbjct: 6 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFIT-TVGIDFRPKRVVYRASGPDGPVGR 64 Query: 252 DKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 431 +++ L +WDTAGQERFR++T++++R A G +L++D+T QSF N+ + W ++++H+ Sbjct: 65 GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRN-WISQLQMHAYC 123 Query: 432 KECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + +L GNK D ++ R+V EE +A A++ G + E+S Sbjct: 124 ENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETS 163
>RB22A_MOUSE (P35285) Ras-related protein Rab-22A (Rab-22) (Rab-14)| Length = 194 Score = 105 bits (263), Expect = 7e-23 Identities = 58/145 (40%), Positives = 85/145 (58%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV L+GD+ VGKSS++ FV + D +I+PTIG F K + ++ K IWDTAGQE Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDS-FDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 RFR + YYRG+ I+VYD+TK ++F+ L + W +E+ H V + GNK D Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKN-WVRELRQHGP-PSIVVAIAGNKCDLT 123 Query: 477 EDRMVTTEEGLAFAQQCGCLFLESS 551 + R V + +A +F+E+S Sbjct: 124 DVREVMERDAKDYADSIHAIFVETS 148
>RAB6B_CAEEL (Q22782) Ras-related protein Rab-6.2| Length = 205 Score = 105 bits (262), Expect = 9e-23 Identities = 55/146 (37%), Positives = 90/146 (61%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK++ +G+ +VGK+SL+ F+ + D+ TIG+DF K + + D+ ++L +WDTAGQ Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDS-FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFR++ SY R + ++VYD+T SF + W ++ + + MLVGNK D Sbjct: 70 ERFRSLIPSYIRDSTVAVVVYDITNSNSF-HQTSKWIDDVRT-ERGSDVIIMLVGNKTDL 127 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 + R VTT+EG A++ +F+E+S Sbjct: 128 SDKRQVTTDEGERKAKELNVMFIETS 153
>RAB5_TOBAC (P29687) Ras-related protein Rab5| Length = 200 Score = 105 bits (261), Expect = 1e-22 Identities = 58/145 (40%), Positives = 84/145 (57%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 K++L+GD GKSSL++ FV + S TIG F ++V + +K IWDTAGQE Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQES-TIGAAFFSSTVSVNNATVKFEIWDTAGQE 70 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 R+ ++ YYRGA I+VYD+T +S A W +E++ N V L GNK D + Sbjct: 71 RYHSLAPMYYRGAAAAIIVYDITSTESLAR-AKKWVQELQKQG-NPNMVMALAGNKADLE 128 Query: 477 EDRMVTTEEGLAFAQQCGCLFLESS 551 + R VT EE +A++ G F+E+S Sbjct: 129 DKRKVTAEEARLYAEENGLFFMETS 153
>RAB33_CIOIN (P91580) Putative Ras-related protein Rab-33| Length = 218 Score = 104 bits (259), Expect = 2e-22 Identities = 60/148 (40%), Positives = 84/148 (56%), Gaps = 2/148 (1%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK+++IGDS VGK+ L F + + TIGVDF+ + L + +++KL +WDTAGQ Sbjct: 16 FKIIVIGDSDVGKTCLTYRFCTGK-FPEKTEATIGVDFRERTLDIDGEQIKLQLWDTAGQ 74 Query: 294 ERFR-TITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN-KECVKMLVGNKL 467 ERFR ++ YYR H ++ YDVTK +SF L W +E E +S N E ++LVGNK Sbjct: 75 ERFRKSMVPHYYRNVHAVVFTYDVTKGRSFQGLPS-WIEECERYSLNASEIPRILVGNKC 133 Query: 468 DKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D + V T FA E+S Sbjct: 134 DLKDQAEVDTNSATRFADANSMPLFETS 161
>RB22A_CANFA (P51154) Ras-related protein Rab-22A (Rab-22)| Length = 194 Score = 103 bits (258), Expect = 2e-22 Identities = 58/145 (40%), Positives = 84/145 (57%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV L+GD+ VGKSS++ FV + D +I+PTIG F K + ++ K IWDTAGQE Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDS-FDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 FR + YYRG+ I+VYD+TK ++F+ L + W KE+ H V + GNK D Sbjct: 66 AFRALAPMYYRGSAAAIIVYDITKEETFSTLKN-WVKELRQHGP-PNIVVAIAGNKCDLI 123 Query: 477 EDRMVTTEEGLAFAQQCGCLFLESS 551 + R V + +A +F+E+S Sbjct: 124 DVREVMERDAKDYADSIHAIFVETS 148
>RB27A_RAT (P23640) Ras-related protein Rab-27A (Rab-27) (GTP-binding protein| Ram) (Ram p25) Length = 221 Score = 103 bits (258), Expect = 2e-22 Identities = 58/160 (36%), Positives = 96/160 (60%), Gaps = 10/160 (6%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFL---------TVG- 251 YD K L +GDS VGK+S+L + I+ T+G+DF+ K + TVG Sbjct: 6 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFIT-TVGIDFREKRVVYRANGPDGTVGR 64 Query: 252 DKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 431 +++ L +WDTAGQERFR++T++++R A G +L++D+T QSF N+ + W ++++H+ Sbjct: 65 GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRN-WISQLQMHAYC 123 Query: 432 KECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + +L GNK D ++ R V EE A++ G + E+S Sbjct: 124 ENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETS 163
>RAB6B_MOUSE (P61294) Ras-related protein Rab-6B| Length = 208 Score = 103 bits (256), Expect = 4e-22 Identities = 54/146 (36%), Positives = 89/146 (60%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK++ +G+ +VGK+SL+ F+ + D+ TIG+DF K + + D+ ++L +WDTAGQ Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDS-FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFR++ SY R + ++VYD+T SF + W ++ + + MLVGNK D Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSK-WIDDVRT-ERGSDVIIMLVGNKTDL 130 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 + R +T EEG A++ +F+E+S Sbjct: 131 ADKRQITIEEGEQRAKELSVMFIETS 156
>RAB6B_HUMAN (Q9NRW1) Ras-related protein Rab-6B| Length = 208 Score = 103 bits (256), Expect = 4e-22 Identities = 54/146 (36%), Positives = 89/146 (60%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK++ +G+ +VGK+SL+ F+ + D+ TIG+DF K + + D+ ++L +WDTAGQ Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDS-FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFR++ SY R + ++VYD+T SF + W ++ + + MLVGNK D Sbjct: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSK-WIDDVRT-ERGSDVIIMLVGNKTDL 130 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 + R +T EEG A++ +F+E+S Sbjct: 131 ADKRQITIEEGEQRAKELSVMFIETS 156
>RYH1_SCHPO (P17608) GTP-binding protein ryh1| Length = 201 Score = 103 bits (256), Expect = 4e-22 Identities = 55/146 (37%), Positives = 89/146 (60%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK++ +G+ +VGK+SL+ F+ D+ TIG+DF K + + D+ ++L +WDTAGQ Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQ-FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFR++ SY R + I+VYD+T SF N + W +++ + + +LVGNK D Sbjct: 71 ERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRA-ERGDDVIIVLVGNKTDL 128 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 + R VT EEG A++ + +E+S Sbjct: 129 ADKRQVTQEEGEKKAKELKIMHMETS 154
>RAB9B_PONPY (Q5R4W9) Ras-related protein Rab-9B| Length = 201 Score = 102 bits (255), Expect = 6e-22 Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 4/149 (2%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+L+GD VGKSSL+ +V+ D TIGV+F + L V + + L IWDTAGQE Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNK-FDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNKL 467 RF+++ + +YRGA +L + V RQSF NL + W KE ++ K+ +++GNK+ Sbjct: 68 RFKSLRTPFYRGADCCLLTFSVDDRQSFENLGN-WQKEFIYYADVKDPEHFPFVVLGNKV 126 Query: 468 DKDEDRMVTTEEGLAFAQQCGCL-FLESS 551 DK EDR VTTEE A+ + G +LE+S Sbjct: 127 DK-EDRQVTTEEAQAWCMENGDYPYLETS 154
>RAB9B_MOUSE (Q8BHH2) Ras-related protein Rab-9B| Length = 201 Score = 102 bits (254), Expect = 7e-22 Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 4/149 (2%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+L+GD VGKSSL+ +V+ D TIGV+F + L V + + L IWDTAGQE Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNK-FDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKE---CVKMLVGNKL 467 RF+++ + +YRGA +L + V RQSF NL + W KE ++ K+ +++GNK+ Sbjct: 68 RFKSLRTPFYRGADCCLLTFSVDDRQSFENLGN-WQKEFIYYADVKDPDHFPFVVLGNKV 126 Query: 468 DKDEDRMVTTEEGLAFAQQCGCL-FLESS 551 DK EDR VTTEE A+ + G +LE+S Sbjct: 127 DK-EDRQVTTEEAQAWCMENGNYPYLETS 154
>RB27A_MOUSE (Q9ERI2) Ras-related protein Rab-27A| Length = 221 Score = 102 bits (253), Expect = 9e-22 Identities = 57/160 (35%), Positives = 95/160 (59%), Gaps = 10/160 (6%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLT---------VG- 251 YD K L +GDS VGK+S+L + I+ T+G+DF+ K + VG Sbjct: 6 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFIT-TVGIDFREKRVVYRANGPDGAVGR 64 Query: 252 DKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 431 +++ L +WDTAGQERFR++T++++R A G +L++D+T QSF N+ + W ++++H+ Sbjct: 65 GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRN-WISQLQMHAYC 123 Query: 432 KECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + +L GNK D ++ R V EE A++ G + E+S Sbjct: 124 ENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETS 163
>YPT7_SCHPO (O94655) GTP-binding protein ypt7| Length = 205 Score = 101 bits (252), Expect = 1e-21 Identities = 61/142 (42%), Positives = 88/142 (61%), Gaps = 4/142 (2%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+++G+S VGK+S++ +V+ D TIG DF K + V DK + L +WDTAGQE Sbjct: 10 KVIILGESGVGKTSIMNQYVNRK-FSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQE 68 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKE--IELHSTNKECVK-MLVGNKL 467 RF+++ ++YRGA +LVYDV +SF L D W E I+ +N E +L+GNK+ Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNNSKSFETL-DSWRDEFLIQASPSNPETFPFILLGNKV 127 Query: 468 DKDED-RMVTTEEGLAFAQQCG 530 D +E RMV+ + LAF Q G Sbjct: 128 DVEEQKRMVSKSKALAFCQARG 149
>RAB6A_MOUSE (P35279) Ras-related protein Rab-6A (Rab-6)| Length = 207 Score = 101 bits (251), Expect = 2e-21 Identities = 54/146 (36%), Positives = 88/146 (60%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK++ +G+ +VGK+SL+ F+ + D+ TIG+DF K + + D+ ++L +WDTAGQ Sbjct: 13 FKLVFLGEQSVGKTSLITRFMYDS-FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 71 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFR++ SY R + ++VYD+T SF W ++ + + MLVGNK D Sbjct: 72 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTK-WIDDVRT-ERGSDVIIMLVGNKTDL 129 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 + R V+ EEG A++ +F+E+S Sbjct: 130 ADKRQVSIEEGERKAKELNVMFIETS 155
>RAB6A_HUMAN (P20340) Ras-related protein Rab-6A (Rab-6)| Length = 207 Score = 101 bits (251), Expect = 2e-21 Identities = 54/146 (36%), Positives = 88/146 (60%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK++ +G+ +VGK+SL+ F+ + D+ TIG+DF K + + D+ ++L +WDTAGQ Sbjct: 13 FKLVFLGEQSVGKTSLITRFMYDS-FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 71 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFR++ SY R + ++VYD+T SF W ++ + + MLVGNK D Sbjct: 72 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTK-WIDDVRT-ERGSDVIIMLVGNKTDL 129 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 + R V+ EEG A++ +F+E+S Sbjct: 130 ADKRQVSIEEGERKAKELNVMFIETS 155
>RHA1_ARATH (P31582) Ras-related protein RHA1| Length = 200 Score = 101 bits (251), Expect = 2e-21 Identities = 59/145 (40%), Positives = 83/145 (57%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 K++L+GD GKSSL++ FV + S TIG F + L V D +K IWDTAGQE Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQES-TIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 R+ ++ YYRGA I+V+D+T + SF A W +E++ N V L GNK D Sbjct: 71 RYHSLAPMYYRGAAAAIIVFDITNQASFER-AKKWVQELQAQG-NPNMVMALAGNKADLL 128 Query: 477 EDRMVTTEEGLAFAQQCGCLFLESS 551 + R V+ EE +AQ+ F+E+S Sbjct: 129 DARKVSAEEAEIYAQENSLFFMETS 153
>RAB9B_HUMAN (Q9NP90) Ras-related protein Rab-9B (Rab-9L) (RAB9-like protein)| Length = 201 Score = 101 bits (251), Expect = 2e-21 Identities = 64/149 (42%), Positives = 92/149 (61%), Gaps = 4/149 (2%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+L+GD VGKSSL+ +V+ D TIGV+F + L V + + L IWDTAGQE Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNK-FDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNKL 467 RF+++ + +YRGA +L + V RQSF NL + W KE ++ K+ +++GNK+ Sbjct: 68 RFKSLRTPFYRGADCCLLTFSVDDRQSFENLGN-WQKEFIYYADVKDPEHFPFVVLGNKV 126 Query: 468 DKDEDRMVTTEEGLAFAQQCGCL-FLESS 551 DK EDR VTTEE + + G +LE+S Sbjct: 127 DK-EDRQVTTEEAQTWCMENGDYPYLETS 154
>RAB6A_CAEEL (P34213) Ras-related protein Rab-6.1| Length = 205 Score = 100 bits (249), Expect = 3e-21 Identities = 52/146 (35%), Positives = 90/146 (61%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK++ +G+ +VGK+S++ F+ + D+ TIG+DF K + + D+ ++L +WDTAGQ Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDS-FDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 70 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 ERFR++ SY R + ++VYD+T SF + W ++ + + + +LVGNK D Sbjct: 71 ERFRSLIPSYIRDSSVAVVVYDITNANSF-HQTTKWVDDVR-NERGCDVIIVLVGNKTDL 128 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 + R V+TE+G A+ +F+E+S Sbjct: 129 ADKRQVSTEDGEKKARDLNVMFIETS 154
>RAB21_GEOCY (Q8WQ53) Ras-related protein Rab-21| Length = 229 Score = 100 bits (248), Expect = 4e-21 Identities = 55/138 (39%), Positives = 85/138 (61%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+L+G+ AVGK+SL++ + S +D T+ F K L +G K+++L IWDTAGQE Sbjct: 18 KVVLLGEGAVGKTSLVLRY-SENKFNDKHEQTLQASFVEKRLNIGGKRIQLAIWDTAGQE 76 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDKD 476 R+ + YYR + G I+VYD+T SF + A W KE++ +K + +VGNK+D D Sbjct: 77 RYHALGPIYYRDSQGAIIVYDITDEDSF-HKARNWIKELKRMLGDKVTL-CIVGNKIDLD 134 Query: 477 EDRMVTTEEGLAFAQQCG 530 R V+ ++ L +A+ G Sbjct: 135 RQRTVSEKDALEYAESVG 152
>RAB4A_ECHMU (Q9GP33) Probable Ras-related protein Rab-4A| Length = 223 Score = 99.4 bits (246), Expect = 6e-21 Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 1/151 (0%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWD 281 +D FK L+IG++ GK+ +L + + TIG +F + ++V +K+ IWD Sbjct: 6 FDYLFKFLIIGNAGTGKTCILRRYTERK-FFPNTQHTIGAEFGSRVISVDGTHVKIQIWD 64 Query: 282 TAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGN 461 TAGQERFR++ SYY A G +LVYD+T R SF + W + H V +LVGN Sbjct: 65 TAGQERFRSMARSYYHDAVGTLLVYDITNRTSF-GAVEQWLGDAR-HLATPGVVVILVGN 122 Query: 462 KLD-KDEDRMVTTEEGLAFAQQCGCLFLESS 551 K D +D D VT E FAQ+ G F+E+S Sbjct: 123 KKDLRDTDGQVTHWEANTFAQENGLQFIETS 153
>RB33B_MOUSE (O35963) Ras-related protein Rab-33B| Length = 229 Score = 99.4 bits (246), Expect = 6e-21 Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK+++IGDS VGK+ L F A D TIGVDF+ + + + +++K+ +WDTAGQ Sbjct: 34 FKIIVIGDSNVGKTCLTYRFC-AGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQ 92 Query: 294 ERFR-TITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 ERFR ++ YYR H ++ VYD+T SF +L W +E + H + ++LVGNK D Sbjct: 93 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLANDIPRILVGNKCD 151 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 V T+ FA E+S Sbjct: 152 LRSAIQVPTDLAQKFADTHSMPLFETS 178
>RB33B_HUMAN (Q9H082) Ras-related protein Rab-33B| Length = 229 Score = 99.4 bits (246), Expect = 6e-21 Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK+++IGDS VGK+ L F A D TIGVDF+ + + + +++K+ +WDTAGQ Sbjct: 34 FKIIVIGDSNVGKTCLTYRFC-AGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQ 92 Query: 294 ERFR-TITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 ERFR ++ YYR H ++ VYD+T SF +L W +E + H + ++LVGNK D Sbjct: 93 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPS-WIEECKQHLLANDIPRILVGNKCD 151 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 V T+ FA E+S Sbjct: 152 LRSAIQVPTDLAQKFADTHSMPLFETS 178
>RABB_DICDI (P34142) Ras-related protein RabB| Length = 213 Score = 98.6 bits (244), Expect = 1e-20 Identities = 53/147 (36%), Positives = 85/147 (57%) Frame = +3 Query: 111 SFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAG 290 SFKV+L+G+ VGK+S++ ++ D + T F K + +G K++ LTIWDTAG Sbjct: 7 SFKVVLLGEGCVGKTSIVFRYIDNIFNDKHLM-TQHAGFFQKHINIGGKRICLTIWDTAG 65 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QERF + YYRG+ G ++VYD+T SF A W KE++ N + ++GNK D Sbjct: 66 QERFHALGPIYYRGSQGALVVYDITDNDSFIK-AKNWIKELKTMLGN-DISLCIIGNKCD 123 Query: 471 KDEDRMVTTEEGLAFAQQCGCLFLESS 551 ++ R++ + A+A+ G + +S Sbjct: 124 LEKTRVIPLADAEAYAKSVGAIHYSTS 150
>YPT5_SCHPO (P36586) GTP-binding protein ypt5| Length = 211 Score = 98.2 bits (243), Expect = 1e-20 Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 2/161 (1%) Frame = +3 Query: 75 AMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGD 254 A + P + + K++L+GDSAVGKSSL++ FV DD TIG F + L + + Sbjct: 2 ASNTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQ-FDDYRESTIGAAFLTQTLPIDE 60 Query: 255 K-KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 431 +KL IWDTAGQER++++ YYR A+ I+VYD+T+ S A W KE++ Sbjct: 61 NTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEK-AKSWIKELQ-RQAP 118 Query: 432 KECVKMLVGNKLD-KDEDRMVTTEEGLAFAQQCGCLFLESS 551 + V L GNKLD E R V + A+A + LF E+S Sbjct: 119 EGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETS 159
>RAB9A_HUMAN (P51151) Ras-related protein Rab-9A (Rab-9)| Length = 201 Score = 97.8 bits (242), Expect = 2e-20 Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 3/142 (2%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FKV+L+GD VGKSSL+ +V+ D + TIGV+F K L V + + IWDTAGQ Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNK-FDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNK 464 ERFR++ + +YRG+ +L + V QSF NL++ W KE ++ KE +++GNK Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNK 125 Query: 465 LDKDEDRMVTTEEGLAFAQQCG 530 +D E R V+TEE A+ + G Sbjct: 126 IDISE-RQVSTEEAQAWCRDNG 146
>RAB9A_CANFA (P24408) Ras-related protein Rab-9A (Rab-9)| Length = 201 Score = 97.8 bits (242), Expect = 2e-20 Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 3/142 (2%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FKV+L+GD VGKSSL+ +V+ D + TIGV+F K L V + + IWDTAGQ Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNK-FDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNK 464 ERFR++ + +YRG+ +L + V QSF NL++ W KE ++ KE +++GNK Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNK 125 Query: 465 LDKDEDRMVTTEEGLAFAQQCG 530 +D E R V+TEE A+ + G Sbjct: 126 IDISE-RQVSTEEAQAWCRDNG 146
>RB27B_MOUSE (Q99P58) Ras-related protein Rab-27B| Length = 217 Score = 97.1 bits (240), Expect = 3e-20 Identities = 54/164 (32%), Positives = 95/164 (57%), Gaps = 14/164 (8%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDK---- 257 YD K+L +GDS VGK++ L + TD+ +P T+G+DF+ K + + Sbjct: 5 YDYLIKLLALGDSGVGKTTFLYRY-----TDNKFNPKFITTVGIDFREKRVVYDTQGADG 59 Query: 258 ------KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIEL 419 K+ L +WDTAGQERFR++T++++R A G +L++D+T +QSF N+ + W +++ Sbjct: 60 ASGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQA 118 Query: 420 HSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ++ + +L+GNK D + R V + A++ G + E+S Sbjct: 119 NAYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETS 162
>RB27B_HUMAN (O00194) Ras-related protein Rab-27B (C25KG)| Length = 217 Score = 96.3 bits (238), Expect = 5e-20 Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 14/164 (8%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDK---- 257 YD K+L +GDS VGK++ L + TD+ +P T+G+DF+ K + + Sbjct: 5 YDYLIKLLALGDSGVGKTTFLYRY-----TDNKFNPKFITTVGIDFREKRVVYNAQGPNG 59 Query: 258 ------KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIEL 419 K+ L +WDTAGQERFR++T++++R A G +L++D+T +QSF N+ + W +++ Sbjct: 60 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQA 118 Query: 420 HSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ++ + +L+GNK D + R V + A + G + E+S Sbjct: 119 NAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETS 162
>YPT7_YEAST (P32939) GTP-binding protein YPT7| Length = 208 Score = 96.3 bits (238), Expect = 5e-20 Identities = 53/133 (39%), Positives = 84/133 (63%), Gaps = 4/133 (3%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTV-GDKKLKLTIWDTAGQ 293 KV+++GDS VGK+SL+ +V+ + TIG DF K +TV GDK + +WDTAGQ Sbjct: 10 KVIILGDSGVGKTSLMHRYVNDKYSQQ-YKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 68 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELH---STNKECVKMLVGNK 464 ERF+++ ++YRGA +LVYDVT SF N+ W E +H ++ + +++GNK Sbjct: 69 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKS-WRDEFLVHANVNSPETFPFVILGNK 127 Query: 465 LDKDEDRMVTTEE 503 +D +E + + +E+ Sbjct: 128 IDAEESKKIVSEK 140
>RAB9A_RAT (Q99P75) Ras-related protein Rab-9A (Rab-9)| Length = 201 Score = 96.3 bits (238), Expect = 5e-20 Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 3/142 (2%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK++L+GD VGKSSL+ +V+ D + TIGV+F K L V + + IWDTAGQ Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNK-FDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNK 464 ERFR++ + +YRG+ +L + V QSF NL++ W KE ++ KE +++GNK Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNK 125 Query: 465 LDKDEDRMVTTEEGLAFAQQCG 530 D E R V+TEE A+ + G Sbjct: 126 TDIKE-RQVSTEEAQAWCKDNG 146
>RAB9A_MOUSE (Q9R0M6) Ras-related protein Rab-9A (Rab-9) (Sid 99)| Length = 201 Score = 96.3 bits (238), Expect = 5e-20 Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 3/142 (2%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 FK++L+GD VGKSSL+ +V+ D + TIGV+F K L V + + IWDTAGQ Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNK-FDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNK 464 ERFR++ + +YRG+ +L + V QSF NL++ W KE ++ KE +++GNK Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNK 125 Query: 465 LDKDEDRMVTTEEGLAFAQQCG 530 D E R V+TEE A+ + G Sbjct: 126 TDIKE-RQVSTEEAQAWCKDNG 146
>RB27B_RAT (Q99P74) Ras-related protein Rab-27B| Length = 217 Score = 95.9 bits (237), Expect = 7e-20 Identities = 54/164 (32%), Positives = 95/164 (57%), Gaps = 14/164 (8%) Frame = +3 Query: 102 YDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISP----TIGVDFKIKFLTVGDK---- 257 YD K+L +GDS VGK++ L + TD+ +P T+G+DF+ K + + Sbjct: 5 YDYLIKLLALGDSGVGKTTFLYRY-----TDNKFNPKFITTVGIDFREKRVVYDTQGADG 59 Query: 258 ------KLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIEL 419 K+ L +WDTAGQERFR++T++++R A G +L++D+T +QSF N+ + W +++ Sbjct: 60 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQA 118 Query: 420 HSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 ++ + +L+GNK D + R V + A++ G + E+S Sbjct: 119 NAYCENPDIVLIGNKADLLDQREVNERQARELAEKYGIPYFETS 162
>YPTC5_CHLRE (Q39573) GTP-binding protein YPTC5| Length = 206 Score = 95.9 bits (237), Expect = 7e-20 Identities = 58/151 (38%), Positives = 92/151 (60%), Gaps = 6/151 (3%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+++GDS VGK+SL+ +V T + TIG DF K + V DKK+ + IWDTAGQE Sbjct: 10 KVIILGDSGVGKTSLMNQYVQKKFTKE-YKATIGADFLTKEIEVDDKKVTMQIWDTAGQE 68 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNKL 467 RF+++ S++YRGA +LV+DV +SF +L D W E + + + M++GNK+ Sbjct: 69 RFQSLGSAFYRGADCCVLVFDVNNAKSFDDL-DNWRDEFIIQAGPPDPDNFPFMVLGNKI 127 Query: 468 DKD--EDRMVTTEEGLAFAQQCGCL-FLESS 551 D++ R V+ ++ A+ G + + E+S Sbjct: 128 DENGGSSRQVSEKKAKAWCASKGSIPYFETS 158
>RAB7_NEUCR (Q9C2L8) Probable Ras-related protein Rab7| Length = 205 Score = 95.5 bits (236), Expect = 9e-20 Identities = 52/142 (36%), Positives = 88/142 (61%), Gaps = 4/142 (2%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+++GDS VGK+SL+ +V+ TIG DF + + V D+++ + +WDTAGQE Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKK-FSASYKATIGADFLTREVLVDDRQVTMQLWDTAGQE 68 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNKL 467 RF+++ ++YRGA +LVYDV +SF L D W E + ++ ++ +++GNK+ Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNNSKSFDAL-DSWRDEFLIQASPRDPDNFPFVVLGNKI 127 Query: 468 DKDED-RMVTTEEGLAFAQQCG 530 D +E R+++T+ + F Q G Sbjct: 128 DMEESKRVISTKRAMTFCQSKG 149
>RAB23_HUMAN (Q9ULC3) Ras-related protein Rab-23| Length = 237 Score = 94.7 bits (234), Expect = 2e-19 Identities = 54/149 (36%), Positives = 86/149 (57%) Frame = +3 Query: 105 DCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDT 284 + + K++++G+ AVGKSS++ + T D TIGVDF + + V D+ ++L +WDT Sbjct: 7 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKD-YKKTIGVDFLERQIQVNDEDVRLMLWDT 65 Query: 285 AGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNK 464 AGQE F IT +YYRGA +LV+ T R+SF ++ W +++ + V LV NK Sbjct: 66 AGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSS-WREKVVAEVGDIPTV--LVQNK 122 Query: 465 LDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +D +D + EE A A++ F +S Sbjct: 123 IDLLDDSCIKNEEAEALAKRLKLRFYRTS 151
>YPTV5_VOLCA (P36864) GTP-binding protein yptV5| Length = 205 Score = 94.4 bits (233), Expect = 2e-19 Identities = 58/150 (38%), Positives = 91/150 (60%), Gaps = 5/150 (3%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 K++++GDS VGK+SL+ +V T + TIG DF K + V DKK+ + IWDTAGQE Sbjct: 10 KIIILGDSGVGKTSLMNQYVQKKFTKE-YKATIGADFLTKEIEVDDKKVTMQIWDTAGQE 68 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELH---STNKECVKMLVGNKL 467 RF+++ S++YRGA +LV+DV +SF +L D W E + S +++GNK+ Sbjct: 69 RFQSLGSAFYRGADCCMLVFDVNNAKSFDDL-DNWRDEFIIQAGPSDPDNFPFVVLGNKI 127 Query: 468 DK-DEDRMVTTEEGLAFAQQCGCL-FLESS 551 D+ +R VT ++ A+ G + + E+S Sbjct: 128 DEVGVNRQVTEKKAKAWCASKGSIPYFETS 157
>RAB7_DICDI (P36411) Ras-related protein Rab7| Length = 203 Score = 94.4 bits (233), Expect = 2e-19 Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 3/141 (2%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+++GDS VGK+SL+ +V+ + TIG DF K L V D+ + + IWDTAGQE Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKK-FSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQE 68 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNKL 467 RF+++ ++YRGA +L YDV ++F NL D W E + + ++ +++GNK+ Sbjct: 69 RFQSLGVAFYRGADCCVLCYDVNVAKTFENL-DSWRDEFLIQAGPRDPDNFPFVVLGNKI 127 Query: 468 DKDEDRMVTTEEGLAFAQQCG 530 D + R+V+ + ++ Q G Sbjct: 128 DLENQRVVSQKRAASWCQSKG 148
>RIT2_HUMAN (Q99578) GTP-binding protein Rit2 (Ras-like protein expressed in| neurons) (Ras-like without CAAX protein 2) Length = 217 Score = 93.6 bits (231), Expect = 3e-19 Identities = 61/163 (37%), Positives = 89/163 (54%) Frame = +3 Query: 63 PGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFL 242 PG+A+ GS +KV+++G VGKS++ + F+S D PTI +K + + Sbjct: 11 PGSASGGSR-------EYKVVMLGAGGVGKSAMTMQFISHQFPDYH-DPTIEDAYKTQ-V 61 Query: 243 TVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELH 422 + ++ L I DTAGQ F + Y RG G I+ Y VT RQSF A ++ Sbjct: 62 RIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVR 121 Query: 423 STNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 T E +LVGNK+D ++ R V+TEEGL+ AQ+ C F E+S Sbjct: 122 HT-YEIPLVLVGNKIDLEQFRQVSTEEGLSLAQEYNCGFFETS 163
>YPT71_SCHPO (Q9HDY0) GTP-binding protein ypt71| Length = 208 Score = 93.6 bits (231), Expect = 3e-19 Identities = 49/125 (39%), Positives = 79/125 (63%), Gaps = 2/125 (1%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+++GDS VGK+ L+ FV+ + TIG DF K + V DK + L +WDTAGQE Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQK-FSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQE 68 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV--KMLVGNKLD 470 RF+++ ++YRGA ++VY+V +SF ++ + W +E ++ EC ++VGN++D Sbjct: 69 RFQSLGMAFYRGADCCVIVYNVNNSKSFDSVEN-WRQEFLYQTSQDECAFPFIIVGNQID 127 Query: 471 KDEDR 485 KD + Sbjct: 128 KDASK 132
>RABL_MIMIV (Q5UQ27) Probable Rab-related GTPase| Length = 215 Score = 92.8 bits (229), Expect = 6e-19 Identities = 56/148 (37%), Positives = 88/148 (59%), Gaps = 2/148 (1%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIK-FLTVGDKKLKLTIWDTAG 290 +K++LIG S VGKSS++ F+ + +SPTIG F K + K LKL IWDTAG Sbjct: 14 YKIILIGSSGVGKSSIVHQFLFNRKISN-VSPTIGAAFASKQVIAKNGKTLKLNIWDTAG 72 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLD 470 QERFR+IT YY + G ++V+DVT R+SF ++ W ++ ++ + ++V NK+D Sbjct: 73 QERFRSITKMYYTNSLGCLVVFDVTDRESFDDVY-YWINDLRINCHTTYYI-LVVANKID 130 Query: 471 KDEDR-MVTTEEGLAFAQQCGCLFLESS 551 D++ V+ E F + C ++ +S Sbjct: 131 IDKNNWRVSENEIKKFCRDNDCDYVFAS 158
>YPT53_YEAST (P36019) GTP-binding protein YPT53| Length = 220 Score = 92.4 bits (228), Expect = 7e-19 Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 6/153 (3%) Frame = +3 Query: 111 SFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAG 290 + KV+L+G+SAVGKSS+++ FVS + PTIG F K +T K +K IWDTAG Sbjct: 12 TIKVVLLGESAVGKSSIVLRFVSD-DFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAG 70 Query: 291 QERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKL- 467 QERF + YYR A ++V+DVT SF A W +E+ + V LVGNK+ Sbjct: 71 QERFAPLAPMYYRNAQAALVVFDVTNEGSFYK-AQNWVEELH-EKVGHDIVIALVGNKMD 128 Query: 468 -----DKDEDRMVTTEEGLAFAQQCGCLFLESS 551 D++E+R + ++ L+ E+S Sbjct: 129 LLNNDDENENRAMKAPAVQNLCERENLLYFEAS 161
>RAB23_MOUSE (P35288) Ras-related protein Rab-23 (Rab-15)| Length = 237 Score = 92.4 bits (228), Expect = 7e-19 Identities = 52/149 (34%), Positives = 85/149 (57%) Frame = +3 Query: 105 DCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDT 284 + + K++++G+ AVGKSS++ + T D TIGVDF + + V D+ ++L +WDT Sbjct: 7 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKD-YKKTIGVDFLERQIQVNDEDVRLMLWDT 65 Query: 285 AGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNK 464 AGQE F IT +YYRGA +LV+ T R+SF ++ W +++ + + LV NK Sbjct: 66 AGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISS-WREKVV--AEVGDIPTALVQNK 122 Query: 465 LDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +D +D + EE A++ F +S Sbjct: 123 IDLLDDSCIKNEEAEGLAKRLKLRFYRTS 151
>RAB7_RABIT (O97572) Ras-related protein Rab-7| Length = 207 Score = 91.7 bits (226), Expect = 1e-18 Identities = 52/137 (37%), Positives = 86/137 (62%), Gaps = 3/137 (2%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+++GDS VGK+SL+ +V+ + TIG DF K + V D+ + + IWDTAGQE Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKK-FSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNKL 467 RF++++ ++YRGA +LV+DVT +F L D W E + ++ ++ +++GNK+ Sbjct: 69 RFQSLSVAFYRGADCCVLVFDVTAPNTFKTL-DSWRLEFLIQASPRDPENFPFVVLGNKI 127 Query: 468 DKDEDRMVTTEEGLAFA 518 D E+R V T+ A++ Sbjct: 128 DL-ENRQVATKRAQAWS 143
>RIT1_HUMAN (Q92963) GTP-binding protein Rit1 (Ras-like protein expressed in| many tissues) (Ras-like without CAAX protein 1) Length = 219 Score = 91.3 bits (225), Expect = 2e-18 Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 1/165 (0%) Frame = +3 Query: 60 RPGAAAMGSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAA-PTDDDISPTIGVDFKIK 236 RP + S G S + +K++++G VGKS++ + F+S P D D PTI +KI+ Sbjct: 6 RPVGSCCSSPAGLSRE--YKLVMLGAGGVGKSAMTMQFISHRFPEDHD--PTIEDAYKIR 61 Query: 237 FLTVGDKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIE 416 + + D+ L I DTAGQ F + Y R G I+ Y +T R+SF + + Sbjct: 62 -IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYR 120 Query: 417 LHSTNKECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 + T+ V +LVGNK D + R VT EEGLA A++ C F E+S Sbjct: 121 VRRTDDTPV-VLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETS 164
>RAS1_YEAST (P01119) Ras-like protein 1 precursor| Length = 309 Score = 91.3 bits (225), Expect = 2e-18 Identities = 53/146 (36%), Positives = 83/146 (56%) Frame = +3 Query: 114 FKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQ 293 +K++++G VGKS+L + F+ + D+ PTI ++ K + + DK L I DTAGQ Sbjct: 11 YKIVVVGGGGVGKSALTIQFIQSYFVDE-YDPTIEDSYR-KQVVIDDKVSILDILDTAGQ 68 Query: 294 ERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVKMLVGNKLDK 473 E + + Y R G +LVY VT R SF L + ++I+ + ++VGNKLD Sbjct: 69 EEYSAMREQYMRTGEGFLLVYSVTSRNSFDELLSYY-QQIQRVKDSDYIPVVVVGNKLDL 127 Query: 474 DEDRMVTTEEGLAFAQQCGCLFLESS 551 + +R V+ E+GL A+Q FLE+S Sbjct: 128 ENERQVSYEDGLRLAKQLNAPFLETS 153
>RIT2_RAT (Q5BJQ5) GTP-binding protein Rit2| Length = 217 Score = 90.9 bits (224), Expect = 2e-18 Identities = 58/157 (36%), Positives = 86/157 (54%) Frame = +3 Query: 81 GSTPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKK 260 GS+ G S + +KV+++G VGKS++ + F+S D PTI +K + + + ++ Sbjct: 12 GSSSGGSRE--YKVVMLGAGGVGKSAVTMQFISHQFPDYH-DPTIEDAYKTQ-VRIDNEP 67 Query: 261 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC 440 L I DTAGQ F + Y RG G I+ Y VT RQSF A ++ T E Sbjct: 68 AYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRHT-YEI 126 Query: 441 VKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESS 551 +LVGNK+D ++ R V+TEEG+ A+ C F E+S Sbjct: 127 PLVLVGNKIDLEQFRQVSTEEGMTLARDYNCAFFETS 163
>RAB7_PRUAR (O24461) Ras-related protein Rab7| Length = 207 Score = 90.9 bits (224), Expect = 2e-18 Identities = 54/143 (37%), Positives = 85/143 (59%), Gaps = 5/143 (3%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+++GDS VGK+SL+ +V+ + TIG DF K + D+ L IWDTAGQE Sbjct: 10 KVIILGDSGVGKTSLMNQYVNRK-FSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNKL 467 RF+++ ++YRGA +LVYDV +SF NL + W +E + +T + +++GNK+ Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNVMKSFENLNN-WREEFLIQATPSDPENFPFVVLGNKI 127 Query: 468 DKD--EDRMVTTEEGLAFAQQCG 530 D D R+V+ ++ A+ G Sbjct: 128 DVDGGNSRVVSEKKAKAWCASKG 150
>RAB7_ARATH (O04157) Ras-related protein Rab7 (AtRab75)| Length = 203 Score = 90.9 bits (224), Expect = 2e-18 Identities = 56/151 (37%), Positives = 92/151 (60%), Gaps = 6/151 (3%) Frame = +3 Query: 117 KVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKLKLTIWDTAGQE 296 KV+++GDS VGK+SL+ +V+ TIG DF K L + D+ + L IWDTAGQE Sbjct: 10 KVIILGDSGVGKTSLMNQYVNNK-FSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQE 68 Query: 297 RFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECVK---MLVGNKL 467 RF+++ ++YRGA +LVYDV +SF +L D W E ++ ++ + +L+GNK+ Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNHLKSFESL-DNWHNEFLTRASPRDPMAFPFILLGNKV 127 Query: 468 DKD--EDRMVTTEEGLAF-AQQCGCLFLESS 551 D D R+V+ ++ + A++ ++ E+S Sbjct: 128 DIDGGNSRVVSEKKAREWCAEKGNIVYFETS 158 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,691,429 Number of Sequences: 219361 Number of extensions: 1301002 Number of successful extensions: 7952 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 6512 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7113 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
