Clone Name | bart19h10 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_470212.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 633 Score = 460 bits (232), Expect = e-126 Identities = 406/464 (87%) Strand = Plus / Plus Query: 90 ccggggagcagctacgactgctccttcaaggtgctgctcatcggggactccgccgtcggc 149 |||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 13 ccggcgagcagctacgactgctccttcaagatcctgctcatcggggactcggccgtcggc 72 Query: 150 aagagcagcctcctcgtcagcttcgtctccgccgcccccactgacgacgacatctccccc 209 |||||||| || ||||||||||||||||||||| ||| || |||||||| ||| | ||| Sbjct: 73 aagagcagtctgctcgtcagcttcgtctccgcctcccacatcgacgacgaaatcgctccc 132 Query: 210 accataggggtggattttaaaatcaagtttctcactgttggtgataagaaattgaagttg 269 ||||||||||| || ||||||||||| ||||||||||| || |||||| ||||| | Sbjct: 133 accataggggttgactttaaaatcaaatttctcactgtcaatgggaagaaactgaagcta 192 Query: 270 acaatatgggacaccgctggccaggagaggtttaggacaatcactagttcttactacaga 329 |||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||| Sbjct: 193 acaatatgggacactgctggccaggaaaggtttaggggaatcacaagttcttactacaga 252 Query: 330 ggtgctcatggaattatcctagtttatgatgttacaaagagacaaagtttcacaaatttg 389 ||||| ||||| || || ||||| |||||||| ||||||||| ||||||||||||||||| Sbjct: 253 ggtgcccatggcatcattctagtgtatgatgtcacaaagagagaaagtttcacaaatttg 312 Query: 390 gctgacgtatgggccaaggaaatagaattgcactcaacgaacaaagagtgcgtcaaaatg 449 ||||| |||||||||||||||||||||||||| || || || ||||||||| |||||||| Sbjct: 313 gctgatgtatgggccaaggaaatagaattgcattcgacaaataaagagtgcatcaaaatg 372 Query: 450 cttgttggaaacaaactggacaaggatgaggacagaatggtaacaacagaagaaggtctt 509 ||||| || ||||| |||||||| ||||||| || ||||| |||| |||||||||||| Sbjct: 373 cttgtcgggaacaaggtggacaagaatgaggaaaggatggtgacaagggaagaaggtctt 432 Query: 510 gcctttgcacagcaatgtggatgcctttttctcgaaagcagtgc 553 |||||||| ||| ||| |||||| |||||||| || |||||||| Sbjct: 433 gcctttgcccaggaatctggatgtctttttcttgagagcagtgc 476
>dbj|AK061250.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-F09, full insert sequence Length = 1083 Score = 460 bits (232), Expect = e-126 Identities = 406/464 (87%) Strand = Plus / Plus Query: 90 ccggggagcagctacgactgctccttcaaggtgctgctcatcggggactccgccgtcggc 149 |||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 137 ccggcgagcagctacgactgctccttcaagatcctgctcatcggggactcggccgtcggc 196 Query: 150 aagagcagcctcctcgtcagcttcgtctccgccgcccccactgacgacgacatctccccc 209 |||||||| || ||||||||||||||||||||| ||| || |||||||| ||| | ||| Sbjct: 197 aagagcagtctgctcgtcagcttcgtctccgcctcccacatcgacgacgaaatcgctccc 256 Query: 210 accataggggtggattttaaaatcaagtttctcactgttggtgataagaaattgaagttg 269 ||||||||||| || ||||||||||| ||||||||||| || |||||| ||||| | Sbjct: 257 accataggggttgactttaaaatcaaatttctcactgtcaatgggaagaaactgaagcta 316 Query: 270 acaatatgggacaccgctggccaggagaggtttaggacaatcactagttcttactacaga 329 |||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||| Sbjct: 317 acaatatgggacactgctggccaggaaaggtttaggggaatcacaagttcttactacaga 376 Query: 330 ggtgctcatggaattatcctagtttatgatgttacaaagagacaaagtttcacaaatttg 389 ||||| ||||| || || ||||| |||||||| ||||||||| ||||||||||||||||| Sbjct: 377 ggtgcccatggcatcattctagtgtatgatgtcacaaagagagaaagtttcacaaatttg 436 Query: 390 gctgacgtatgggccaaggaaatagaattgcactcaacgaacaaagagtgcgtcaaaatg 449 ||||| |||||||||||||||||||||||||| || || || ||||||||| |||||||| Sbjct: 437 gctgatgtatgggccaaggaaatagaattgcattcgacaaataaagagtgcatcaaaatg 496 Query: 450 cttgttggaaacaaactggacaaggatgaggacagaatggtaacaacagaagaaggtctt 509 ||||| || ||||| |||||||| ||||||| || ||||| |||| |||||||||||| Sbjct: 497 cttgtcgggaacaaggtggacaagaatgaggaaaggatggtgacaagggaagaaggtctt 556 Query: 510 gcctttgcacagcaatgtggatgcctttttctcgaaagcagtgc 553 |||||||| ||| ||| |||||| |||||||| || |||||||| Sbjct: 557 gcctttgcccaggaatctggatgtctttttcttgagagcagtgc 600
>gb|AY108713.1| Zea mays PCO101165 mRNA sequence Length = 755 Score = 446 bits (225), Expect = e-122 Identities = 414/477 (86%) Strand = Plus / Plus Query: 77 catgggctcgacgccggggagcagctacgactgctccttcaaggtgctgctcatcgggga 136 ||||| |||| |||| | ||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 254 catggcctcgtcgcccgcgagcagctacgactgctccttcaaggtcctgcttatcgggga 313 Query: 137 ctccgccgtcggcaagagcagcctcctcgtcagcttcgtctccgccgcccccactgacga 196 || |||||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 314 ttcggccgtcggcaagagcagcctcctcgtcagcttcgtctccgccgctcacatcgacga 373 Query: 197 cgacatctcccccaccataggggtggattttaaaatcaagtttctcactgttggtgataa 256 ||||||| | || |||||||||||||||||||||||||| ||||||| ||| |||| || Sbjct: 374 cgacatcgcgccaaccataggggtggattttaaaatcaattttctcagtgtgggtgggaa 433 Query: 257 gaaattgaagttgacaatatgggacaccgctggccaggagaggtttaggacaatcactag 316 |||| | || |||||||||||||||| || || || |||||||| |||||||| || || Sbjct: 434 gaaactaaaactgacaatatgggacactgccggtcaagagaggttcaggacaattaccag 493 Query: 317 ttcttactacagaggtgctcatggaattatcctagtttatgatgttacaaagagacaaag 376 ||||||||||| ||||||||||| ||||| |||||||||| ||||||||||| | || Sbjct: 494 ctcttactacaggggtgctcatgggattattttagtttatgacgttacaaagagggagag 553 Query: 377 tttcacaaatttggctgacgtatgggccaaggaaatagaattgcactcaacgaacaaaga 436 |||||||||||||||||| || ||| ||||||||||||| || |||||||| || || || Sbjct: 554 tttcacaaatttggctgatgtgtggaccaaggaaatagagttacactcaacaaataagga 613 Query: 437 gtgcgtcaaaatgcttgttggaaacaaactggacaaggatgaggacagaatggtaacaac 496 ||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| Sbjct: 614 atgcatcaaaatgcttgttggaaataaagtggacaaggatgaggacagaatggtgacaaa 673 Query: 497 agaagaaggtcttgcctttgcacagcaatgtggatgcctttttctcgaaagcagtgc 553 ||||||||||||||| |||||||| || ||||||| || ||| |||| || ||||| Sbjct: 674 agaagaaggtcttgcatttgcacaagaacgtggatgtctctttgtcgagagtagtgc 730
>dbj|AK099130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043D11, full insert sequence Length = 1002 Score = 444 bits (224), Expect = e-121 Identities = 404/464 (87%) Strand = Plus / Plus Query: 90 ccggggagcagctacgactgctccttcaaggtgctgctcatcggggactccgccgtcggc 149 |||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 129 ccggcgagcagctacgactgctccttcaagatcctgctcatcggggactcggccgtcggc 188 Query: 150 aagagcagcctcctcgtcagcttcgtctccgccgcccccactgacgacgacatctccccc 209 |||||||| || ||||||||||||||||||||| ||| || |||||||| ||| | ||| Sbjct: 189 aagagcagtctgctcgtcagcttcgtctccgcctcccacatcgacgacgaaatcgctccc 248 Query: 210 accataggggtggattttaaaatcaagtttctcactgttggtgataagaaattgaagttg 269 ||||||||||| || ||||||||||| ||||||||||| || |||||| ||||| | Sbjct: 249 accataggggttgactttaaaatcaaatttctcactgtcaatgggaagaaactgaagcta 308 Query: 270 acaatatgggacaccgctggccaggagaggtttaggacaatcactagttcttactacaga 329 |||||||||||||| ||||||||||| | ||||||| |||||| ||||||||||||||| Sbjct: 309 acaatatgggacactgctggccaggaaaagtttaggggaatcacaagttcttactacaga 368 Query: 330 ggtgctcatggaattatcctagtttatgatgttacaaagagacaaagtttcacaaatttg 389 ||||| ||||| || || ||||| |||||||| ||||||||| ||||||||||||||||| Sbjct: 369 ggtgcccatggcatcattctagtgtatgatgtcacaaagagagaaagtttcacaaatttg 428 Query: 390 gctgacgtatgggccaaggaaatagaattgcactcaacgaacaaagagtgcgtcaaaatg 449 ||||| |||||||||||||||||||||||||| || || || ||||||||| |||||||| Sbjct: 429 gctgatgtatgggccaaggaaatagaattgcattcgacaaataaagagtgcatcaaaatg 488 Query: 450 cttgttggaaacaaactggacaaggatgaggacagaatggtaacaacagaagaaggtctt 509 ||||| || ||||| |||||||| ||||||| || ||||| |||| |||||||||||| Sbjct: 489 cttgtcgggaacaaggtggacaagaatgaggaaaggatggtgacaagggaagaaggtctt 548 Query: 510 gcctttgcacagcaatgtggatgcctttttctcgaaagcagtgc 553 |||||||| ||| || |||||| |||||||| || |||||||| Sbjct: 549 gcctttgcccagggatctggatgtctttttcttgagagcagtgc 592
>ref|NM_196819.1| Oryza sativa (japonica cultivar-group) putative GTP-binding protein (OSJNBa0018F16.14), mRNA Length = 669 Score = 333 bits (168), Expect = 4e-88 Identities = 372/438 (84%), Gaps = 9/438 (2%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcctcgtcagctt 172 ||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 57 cttcaagatcctgctcatcggggactccggcgtcggcaagagcagcctcctcgtcagctt 116 Query: 173 cgt------ctccgccgcc-cccact--gacgacgacatctcccccaccataggggtgga 223 ||| | |||||||| ||||| |||||||||||| | |||||||| || ||||| Sbjct: 117 cgtcgtcgccgccgccgccgcccacctcgacgacgacatcgctcccaccatcggagtgga 176 Query: 224 ttttaaaatcaagtttctcactgttggtgataagaaattgaagttgacaatatgggacac 283 |||||| |||||||| || || |||||| |||||||||||| ||||||||||||| || Sbjct: 177 ttttaagatcaagttccttacgattggtggaaagaaattgaagctgacaatatgggatac 236 Query: 284 cgctggccaggagaggtttaggacaatcactagttcttactacagaggtgctcatggaat 343 |||||||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 237 tgctggccaggagaggtttaggacaattactagttcttactacagaggtgctcaaggcat 296 Query: 344 tatcctagtttatgatgttacaaagagacaaagtttcacaaatttggctgacgtatgggc 403 ||| ||||| ||||| || || |||||| |||| ||||||||| ||||||| |||||| Sbjct: 297 tattctagtatatgacgtcacgaagagagaaagcttcacaaatctggctgaagtatggag 356 Query: 404 caaggaaatagaattgcactcaacgaacaaagagtgcgtcaaaatgcttgttggaaacaa 463 ||||||||||| | |||||| | |||||||| ||| | |||||||||||||||||||| Sbjct: 357 taaggaaatagagtcacactcatcaaacaaagactgcataaaaatgcttgttggaaacaa 416 Query: 464 actggacaaggatgaggacagaatggtaacaacagaagaaggtcttgcctttgcacagca 523 | | |||||||| || || |||| || |||| ||||||||| |||||||||||| | | Sbjct: 417 aattgacaaggaggatgaaagaactgtcacaagagaagaagggcttgcctttgcagaaga 476 Query: 524 atgtggatgcctttttct 541 || ||||||||| ||||| Sbjct: 477 atctggatgcctatttct 494
>dbj|AK102843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109P10, full insert sequence Length = 1101 Score = 333 bits (168), Expect = 4e-88 Identities = 372/438 (84%), Gaps = 9/438 (2%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcctcgtcagctt 172 ||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 239 cttcaagatcctgctcatcggggactccggcgtcggcaagagcagcctcctcgtcagctt 298 Query: 173 cgt------ctccgccgcc-cccact--gacgacgacatctcccccaccataggggtgga 223 ||| | |||||||| ||||| |||||||||||| | |||||||| || ||||| Sbjct: 299 cgtcgtcgccgccgccgccgcccacctcgacgacgacatcgctcccaccatcggagtgga 358 Query: 224 ttttaaaatcaagtttctcactgttggtgataagaaattgaagttgacaatatgggacac 283 |||||| |||||||| || || |||||| |||||||||||| ||||||||||||| || Sbjct: 359 ttttaagatcaagttccttacgattggtggaaagaaattgaagctgacaatatgggatac 418 Query: 284 cgctggccaggagaggtttaggacaatcactagttcttactacagaggtgctcatggaat 343 |||||||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 419 tgctggccaggagaggtttaggacaattactagttcttactacagaggtgctcaaggcat 478 Query: 344 tatcctagtttatgatgttacaaagagacaaagtttcacaaatttggctgacgtatgggc 403 ||| ||||| ||||| || || |||||| |||| ||||||||| ||||||| |||||| Sbjct: 479 tattctagtatatgacgtcacgaagagagaaagcttcacaaatctggctgaagtatggag 538 Query: 404 caaggaaatagaattgcactcaacgaacaaagagtgcgtcaaaatgcttgttggaaacaa 463 ||||||||||| | |||||| | |||||||| ||| | |||||||||||||||||||| Sbjct: 539 taaggaaatagagtcacactcatcaaacaaagactgcataaaaatgcttgttggaaacaa 598 Query: 464 actggacaaggatgaggacagaatggtaacaacagaagaaggtcttgcctttgcacagca 523 | | |||||||| || || |||| || |||| ||||||||| |||||||||||| | | Sbjct: 599 aattgacaaggaggatgaaagaactgtcacaagagaagaagggcttgcctttgcagaaga 658 Query: 524 atgtggatgcctttttct 541 || ||||||||| ||||| Sbjct: 659 atctggatgcctatttct 676
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 151 bits (76), Expect = 3e-33 Identities = 115/128 (89%) Strand = Plus / Plus Query: 90 ccggggagcagctacgactgctccttcaaggtgctgctcatcggggactccgccgtcggc 149 |||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 2535702 ccggcgagcagctacgactgctccttcaagatcctgctcatcggggactcggccgtcggc 2535761 Query: 150 aagagcagcctcctcgtcagcttcgtctccgccgcccccactgacgacgacatctccccc 209 |||||||| || ||||||||||||||||||||| ||| || |||||||| ||| | ||| Sbjct: 2535762 aagagcagtctgctcgtcagcttcgtctccgcctcccacatcgacgacgaaatcgctccc 2535821 Query: 210 accatagg 217 |||||||| Sbjct: 2535822 accatagg 2535829 Score = 147 bits (74), Expect = 4e-32 Identities = 113/126 (89%) Strand = Plus / Plus Query: 349 tagtttatgatgttacaaagagacaaagtttcacaaatttggctgacgtatgggccaagg 408 |||| |||||||| ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 2537866 tagtgtatgatgtcacaaagagagaaagtttcacaaatttggctgatgtatgggccaagg 2537925 Query: 409 aaatagaattgcactcaacgaacaaagagtgcgtcaaaatgcttgttggaaacaaactgg 468 ||||||||||||| || || || ||||||||| ||||||||||||| || ||||| ||| Sbjct: 2537926 aaatagaattgcattcgacaaataaagagtgcatcaaaatgcttgtcgggaacaaggtgg 2537985 Query: 469 acaagg 474 |||||| Sbjct: 2537986 acaagg 2537991 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 285 gctggccaggagaggtttaggacaatcactagttcttactacagaggtgctcatgg 340 ||||||||||| ||||||||| |||||| |||||||||||||||||||| ||||| Sbjct: 2537199 gctggccaggaaaggtttaggggaatcacaagttcttactacagaggtgcccatgg 2537254 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 475 atgaggacagaatggtaacaacagaagaaggtcttgcctttgcacagcaatgtggatgcc 534 ||||||| || ||||| |||| |||||||||||||||||||| ||| ||| |||||| | Sbjct: 2538392 atgaggaaaggatggtgacaagggaagaaggtcttgcctttgcccaggaatctggatgtc 2538451 Query: 535 tttttctcgaaagcagtgc 553 ||||||| || |||||||| Sbjct: 2538452 tttttcttgagagcagtgc 2538470 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 127 tcatcggggactccgccgtcggcaagagc 155 ||||||||||||||| ||||||||||||| Sbjct: 17988682 tcatcggggactccggcgtcggcaagagc 17988654 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 215 aggggtggattttaaaatcaagtttctcactgttggtgataagaaattgaagttgacaat 274 |||||| || ||||||||||| ||||||||||| || |||||| ||||| | ||||| Sbjct: 2536779 aggggttgactttaaaatcaaatttctcactgtcaatgggaagaaactgaagctaacaat 2536838 Query: 275 atgggacac 283 ||||||||| Sbjct: 2536839 atgggacac 2536847 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 caacccgcccgcccgcacgcgcgc 40 |||||||||||||||| ||||||| Sbjct: 4715469 caacccgcccgcccgcgcgcgcgc 4715492
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 151 bits (76), Expect = 3e-33 Identities = 115/128 (89%) Strand = Plus / Minus Query: 90 ccggggagcagctacgactgctccttcaaggtgctgctcatcggggactccgccgtcggc 149 |||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 134392 ccggcgagcagctacgactgctccttcaagatcctgctcatcggggactcggccgtcggc 134333 Query: 150 aagagcagcctcctcgtcagcttcgtctccgccgcccccactgacgacgacatctccccc 209 |||||||| || ||||||||||||||||||||| ||| || |||||||| ||| | ||| Sbjct: 134332 aagagcagtctgctcgtcagcttcgtctccgcctcccacatcgacgacgaaatcgctccc 134273 Query: 210 accatagg 217 |||||||| Sbjct: 134272 accatagg 134265 Score = 147 bits (74), Expect = 4e-32 Identities = 113/126 (89%) Strand = Plus / Minus Query: 349 tagtttatgatgttacaaagagacaaagtttcacaaatttggctgacgtatgggccaagg 408 |||| |||||||| ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 132228 tagtgtatgatgtcacaaagagagaaagtttcacaaatttggctgatgtatgggccaagg 132169 Query: 409 aaatagaattgcactcaacgaacaaagagtgcgtcaaaatgcttgttggaaacaaactgg 468 ||||||||||||| || || || ||||||||| ||||||||||||| || ||||| ||| Sbjct: 132168 aaatagaattgcattcgacaaataaagagtgcatcaaaatgcttgtcgggaacaaggtgg 132109 Query: 469 acaagg 474 |||||| Sbjct: 132108 acaagg 132103 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 285 gctggccaggagaggtttaggacaatcactagttcttactacagaggtgctcatgg 340 ||||||||||| ||||||||| |||||| |||||||||||||||||||| ||||| Sbjct: 132895 gctggccaggaaaggtttaggggaatcacaagttcttactacagaggtgcccatgg 132840 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 475 atgaggacagaatggtaacaacagaagaaggtcttgcctttgcacagcaatgtggatgcc 534 ||||||| || ||||| |||| |||||||||||||||||||| ||| ||| |||||| | Sbjct: 131702 atgaggaaaggatggtgacaagggaagaaggtcttgcctttgcccaggaatctggatgtc 131643 Query: 535 tttttctcgaaagcagtgc 553 ||||||| || |||||||| Sbjct: 131642 tttttcttgagagcagtgc 131624 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Minus Query: 215 aggggtggattttaaaatcaagtttctcactgttggtgataagaaattgaagttgacaat 274 |||||| || ||||||||||| ||||||||||| || |||||| ||||| | ||||| Sbjct: 133315 aggggttgactttaaaatcaaatttctcactgtcaatgggaagaaactgaagctaacaat 133256 Query: 275 atgggacac 283 ||||||||| Sbjct: 133255 atgggacac 133247
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 151 bits (76), Expect = 3e-33 Identities = 115/128 (89%) Strand = Plus / Plus Query: 90 ccggggagcagctacgactgctccttcaaggtgctgctcatcggggactccgccgtcggc 149 |||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 2535812 ccggcgagcagctacgactgctccttcaagatcctgctcatcggggactcggccgtcggc 2535871 Query: 150 aagagcagcctcctcgtcagcttcgtctccgccgcccccactgacgacgacatctccccc 209 |||||||| || ||||||||||||||||||||| ||| || |||||||| ||| | ||| Sbjct: 2535872 aagagcagtctgctcgtcagcttcgtctccgcctcccacatcgacgacgaaatcgctccc 2535931 Query: 210 accatagg 217 |||||||| Sbjct: 2535932 accatagg 2535939 Score = 147 bits (74), Expect = 4e-32 Identities = 113/126 (89%) Strand = Plus / Plus Query: 349 tagtttatgatgttacaaagagacaaagtttcacaaatttggctgacgtatgggccaagg 408 |||| |||||||| ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 2537976 tagtgtatgatgtcacaaagagagaaagtttcacaaatttggctgatgtatgggccaagg 2538035 Query: 409 aaatagaattgcactcaacgaacaaagagtgcgtcaaaatgcttgttggaaacaaactgg 468 ||||||||||||| || || || ||||||||| ||||||||||||| || ||||| ||| Sbjct: 2538036 aaatagaattgcattcgacaaataaagagtgcatcaaaatgcttgtcgggaacaaggtgg 2538095 Query: 469 acaagg 474 |||||| Sbjct: 2538096 acaagg 2538101 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 285 gctggccaggagaggtttaggacaatcactagttcttactacagaggtgctcatgg 340 ||||||||||| ||||||||| |||||| |||||||||||||||||||| ||||| Sbjct: 2537309 gctggccaggaaaggtttaggggaatcacaagttcttactacagaggtgcccatgg 2537364 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 475 atgaggacagaatggtaacaacagaagaaggtcttgcctttgcacagcaatgtggatgcc 534 ||||||| || ||||| |||| |||||||||||||||||||| ||| ||| |||||| | Sbjct: 2538502 atgaggaaaggatggtgacaagggaagaaggtcttgcctttgcccaggaatctggatgtc 2538561 Query: 535 tttttctcgaaagcagtgc 553 ||||||| || |||||||| Sbjct: 2538562 tttttcttgagagcagtgc 2538580 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 127 tcatcggggactccgccgtcggcaagagc 155 ||||||||||||||| ||||||||||||| Sbjct: 17982223 tcatcggggactccggcgtcggcaagagc 17982195 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 215 aggggtggattttaaaatcaagtttctcactgttggtgataagaaattgaagttgacaat 274 |||||| || ||||||||||| ||||||||||| || |||||| ||||| | ||||| Sbjct: 2536889 aggggttgactttaaaatcaaatttctcactgtcaatgggaagaaactgaagctaacaat 2536948 Query: 275 atgggacac 283 ||||||||| Sbjct: 2536949 atgggacac 2536957 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 caacccgcccgcccgcacgcgcgc 40 |||||||||||||||| ||||||| Sbjct: 4715584 caacccgcccgcccgcgcgcgcgc 4715607
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcctcgtcagctt 172 ||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 61990 cttcaagatcctgctcatcggggactccggcgtcggcaagagcagcctcctcgtcagctt 61931 Query: 173 cgtctccgccgcc 185 |||| ||||||| Sbjct: 61930 cgtcgtcgccgcc 61918 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 285 gctggccaggagaggtttaggacaatcactagttcttactacagaggtgctcatggaatt 344 |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 60028 gctggccaggagaggtttaggacaattactagttcttactacagaggtgctcaaggcatt 59969 Query: 345 atcctag 351 || |||| Sbjct: 59968 attctag 59962 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/129 (83%) Strand = Plus / Minus Query: 346 tcctagtttatgatgttacaaagagacaaagtttcacaaatttggctgacgtatgggcca 405 ||||||| ||||| || || |||||| |||| ||||||||| ||||||| |||||| | Sbjct: 59535 tcctagtatatgacgtcacgaagagagaaagcttcacaaatctggctgaagtatggagta 59476 Query: 406 aggaaatagaattgcactcaacgaacaaagagtgcgtcaaaatgcttgttggaaacaaac 465 |||||||||| | |||||| | |||||||| ||| | ||||||||||||||||||||| Sbjct: 59475 aggaaatagagtcacactcatcaaacaaagactgcataaaaatgcttgttggaaacaaaa 59416 Query: 466 tggacaagg 474 | ||||||| Sbjct: 59415 ttgacaagg 59407 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 219 gtggattttaaaatcaagtttctcactgttggtgataagaaattgaagttgacaatatgg 278 ||||||||||| |||||||| || || |||||| |||||||||||| ||||||||||| Sbjct: 61157 gtggattttaagatcaagttccttacgattggtggaaagaaattgaagctgacaatatgg 61098 Query: 279 ga 280 || Sbjct: 61097 ga 61096 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 492 acaacagaagaaggtcttgcctttgcacagcaatgtggatgcctttttct 541 |||| ||||||||| |||||||||||| | ||| ||||||||| ||||| Sbjct: 59196 acaagagaagaagggcttgcctttgcagaagaatctggatgcctatttct 59147
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcctcgtcagctt 172 ||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 16183101 cttcaagatcctgctcatcggggactccggcgtcggcaagagcagcctcctcgtcagctt 16183042 Query: 173 cgtctccgccgcc 185 |||| ||||||| Sbjct: 16183041 cgtcgtcgccgcc 16183029 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 285 gctggccaggagaggtttaggacaatcactagttcttactacagaggtgctcatggaatt 344 |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 16181139 gctggccaggagaggtttaggacaattactagttcttactacagaggtgctcaaggcatt 16181080 Query: 345 atcctag 351 || |||| Sbjct: 16181079 attctag 16181073 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/129 (83%) Strand = Plus / Minus Query: 346 tcctagtttatgatgttacaaagagacaaagtttcacaaatttggctgacgtatgggcca 405 ||||||| ||||| || || |||||| |||| ||||||||| ||||||| |||||| | Sbjct: 16180646 tcctagtatatgacgtcacgaagagagaaagcttcacaaatctggctgaagtatggagta 16180587 Query: 406 aggaaatagaattgcactcaacgaacaaagagtgcgtcaaaatgcttgttggaaacaaac 465 |||||||||| | |||||| | |||||||| ||| | ||||||||||||||||||||| Sbjct: 16180586 aggaaatagagtcacactcatcaaacaaagactgcataaaaatgcttgttggaaacaaaa 16180527 Query: 466 tggacaagg 474 | ||||||| Sbjct: 16180526 ttgacaagg 16180518 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 ||||||||| |||| |||||||||||||||||||||||| Sbjct: 11537006 ttcaaggtggtgctgatcggggactccgccgtcggcaag 11536968 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 219 gtggattttaaaatcaagtttctcactgttggtgataagaaattgaagttgacaatatgg 278 ||||||||||| |||||||| || || |||||| |||||||||||| ||||||||||| Sbjct: 16182268 gtggattttaagatcaagttccttacgattggtggaaagaaattgaagctgacaatatgg 16182209 Query: 279 ga 280 || Sbjct: 16182208 ga 16182207 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 492 acaacagaagaaggtcttgcctttgcacagcaatgtggatgcctttttct 541 |||| ||||||||| |||||||||||| | ||| ||||||||| ||||| Sbjct: 16180307 acaagagaagaagggcttgcctttgcagaagaatctggatgcctatttct 16180258 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 tgggacaccgctggccaggagagg 299 ||||||||||| |||||||||||| Sbjct: 11536847 tgggacaccgccggccaggagagg 11536824
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcctcgtcagctt 172 ||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 16191342 cttcaagatcctgctcatcggggactccggcgtcggcaagagcagcctcctcgtcagctt 16191283 Query: 173 cgtctccgccgcc 185 |||| ||||||| Sbjct: 16191282 cgtcgtcgccgcc 16191270 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 285 gctggccaggagaggtttaggacaatcactagttcttactacagaggtgctcatggaatt 344 |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 16189380 gctggccaggagaggtttaggacaattactagttcttactacagaggtgctcaaggcatt 16189321 Query: 345 atcctag 351 || |||| Sbjct: 16189320 attctag 16189314 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/129 (83%) Strand = Plus / Minus Query: 346 tcctagtttatgatgttacaaagagacaaagtttcacaaatttggctgacgtatgggcca 405 ||||||| ||||| || || |||||| |||| ||||||||| ||||||| |||||| | Sbjct: 16188887 tcctagtatatgacgtcacgaagagagaaagcttcacaaatctggctgaagtatggagta 16188828 Query: 406 aggaaatagaattgcactcaacgaacaaagagtgcgtcaaaatgcttgttggaaacaaac 465 |||||||||| | |||||| | |||||||| ||| | ||||||||||||||||||||| Sbjct: 16188827 aggaaatagagtcacactcatcaaacaaagactgcataaaaatgcttgttggaaacaaaa 16188768 Query: 466 tggacaagg 474 | ||||||| Sbjct: 16188767 ttgacaagg 16188759 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 ||||||||| |||| |||||||||||||||||||||||| Sbjct: 11543446 ttcaaggtggtgctgatcggggactccgccgtcggcaag 11543408 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 219 gtggattttaaaatcaagtttctcactgttggtgataagaaattgaagttgacaatatgg 278 ||||||||||| |||||||| || || |||||| |||||||||||| ||||||||||| Sbjct: 16190509 gtggattttaagatcaagttccttacgattggtggaaagaaattgaagctgacaatatgg 16190450 Query: 279 ga 280 || Sbjct: 16190449 ga 16190448 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 492 acaacagaagaaggtcttgcctttgcacagcaatgtggatgcctttttct 541 |||| ||||||||| |||||||||||| | ||| ||||||||| ||||| Sbjct: 16188548 acaagagaagaagggcttgcctttgcagaagaatctggatgcctatttct 16188499 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 tgggacaccgctggccaggagagg 299 ||||||||||| |||||||||||| Sbjct: 11543287 tgggacaccgccggccaggagagg 11543264
>ref|NM_196164.1| Oryza sativa (japonica cultivar-group) putative Ras-related protein Rab (OSJNBa0095C06.15), mRNA Length = 609 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 ||||||||| |||| |||||||||||||||||||||||| Sbjct: 31 ttcaaggtggtgctgatcggggactccgccgtcggcaag 69
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 ||||||||| |||| |||||||||||||||||||||||| Sbjct: 120999 ttcaaggtggtgctgatcggggactccgccgtcggcaag 120961 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 tgggacaccgctggccaggagagg 299 ||||||||||| |||||||||||| Sbjct: 120840 tgggacaccgccggccaggagagg 120817
>dbj|AK111872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040K07, full insert sequence Length = 1205 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 ||||||||| |||| |||||||||||||||||||||||| Sbjct: 237 ttcaaggtggtgctgatcggggactccgccgtcggcaag 275 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 396 tgggacaccgccggccaggagaggt 420
>dbj|AK104132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-D05, full insert sequence Length = 1098 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 ||||||||| |||| |||||||||||||||||||||||| Sbjct: 169 ttcaaggtggtgctgatcggggactccgccgtcggcaag 207 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 328 tgggacaccgccggccaggagaggt 352
>gb|AY104355.1| Zea mays PCO115514 mRNA sequence Length = 1053 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 129 atcggggactccgccgtcggcaagagcagcctcctcgtcagcttc 173 ||||| ||||||| |||||||||||||||||||||| || ||||| Sbjct: 229 atcggcgactccggcgtcggcaagagcagcctcctcctccgcttc 273 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtttaggacaatcactagttcttactacagagg 331 |||||||| ||||| || |||||||||||||| | || || |||||||||||||| Sbjct: 370 tgggacacagctggacaagagaggtttaggaccttgaccagctcttactacagagg 425
>ref|NM_120433.2| Arabidopsis thaliana ATRAB ALPHA; GTP binding AT5G03530 (ATRAB ALPHA) mRNA, complete cds Length = 1181 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 270 acaatatgggacaccgctggccaggagaggtttaggacaatcactagttcttactacaga 329 ||||| |||||||| ||||| ||||| ||||||| ||| | || || |||||||||||| Sbjct: 519 acaatctgggacacagctggacaggaacggtttagaacactgacaagctcttactacaga 578 Query: 330 ggtgctcatggaattatcctagtttatgatgt 361 || || || ||||| || || ||||||||||| Sbjct: 579 ggcgcccaaggaatcattctcgtttatgatgt 610
>gb|BT006101.1| Arabidopsis thaliana clone U51168 unknown protein (At5g03530) mRNA, complete cds Length = 664 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 270 acaatatgggacaccgctggccaggagaggtttaggacaatcactagttcttactacaga 329 ||||| |||||||| ||||| ||||| ||||||| ||| | || || |||||||||||| Sbjct: 190 acaatctgggacacagctggacaggaacggtttagaacactgacaagctcttactacaga 249 Query: 330 ggtgctcatggaattatcctagtttatgatgt 361 || || || ||||| || || ||||||||||| Sbjct: 250 ggcgcccaaggaatcattctcgtttatgatgt 281
>emb|BX834085.1|CNS0A0J1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 795 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 270 acaatatgggacaccgctggccaggagaggtttaggacaatcactagttcttactacaga 329 ||||| |||||||| ||||| ||||| ||||||| ||| | || || |||||||||||| Sbjct: 195 acaatctgggacacagctggacaggaacggtttagaacactgacaagctcttactacaga 254 Query: 330 ggtgctcatggaattatcctagtttatgatgt 361 || || || ||||| || || ||||||||||| Sbjct: 255 ggcgcccaaggaatcattctcgtttatgatgt 286
>emb|BX934641.1| Gallus gallus finished cDNA, clone ChEST386e2 Length = 885 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 |||||||||| |||||||||||||||||| ||| || ||||||| Sbjct: 50 cttcaaggtggtgctcatcggggactccggcgtggggaagagca 93
>dbj|AK119027.1| Arabidopsis thaliana At5g03530 mRNA for putative AtRab GTP-binding protein, complete cds, clone: RAFL21-34-N24 Length = 1108 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 270 acaatatgggacaccgctggccaggagaggtttaggacaatcactagttcttactacaga 329 ||||| |||||||| ||||| ||||| ||||||| ||| | || || |||||||||||| Sbjct: 519 acaatctgggacacagctggacaggaacggtttagaacactgacaagctcttactacaga 578 Query: 330 ggtgctcatggaattatcctagtttatgatgt 361 || || || ||||| || || ||||||||||| Sbjct: 579 ggcgcccaaggaatcattctcgtttatgatgt 610
>dbj|D89824.1| Arabidopsis thaliana AtRab mRNA for GTP-binding protein, complete cds Length = 882 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 270 acaatatgggacaccgctggccaggagaggtttaggacaatcactagttcttactacaga 329 ||||| |||||||| ||||| ||||| ||||||| ||| | || || |||||||||||| Sbjct: 220 acaatctgggacacagctggacaggaacggtttagaacactgacaagctcttactacaga 279 Query: 330 ggtgctcatggaattatcctagtttatgatgt 361 || || || ||||| || || ||||||||||| Sbjct: 280 ggcgcccaaggaatcattctcgtttatgatgt 311
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 285 gctggccaggagaggtttaggacaatcactagttcttactacagaggtgctcatggaat 343 ||||| |||||||| ||||| ||| | || ||||||||||||||||| ||||| ||||| Sbjct: 45038 gctggtcaggagagatttagaacactgacaagttcttactacagaggggctcaaggaat 45096
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaagagc 155 ||||||| | ||||||||| ||||||||| ||||||||||||| Sbjct: 41375247 cttcaagatcctgctcatcagggactccggcgtcggcaagagc 41375205 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 atgcttgttggaaacaaactgg 468 |||||||||||||||||||||| Sbjct: 34892409 atgcttgttggaaacaaactgg 34892388 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 31397380 tgggacaccgccggccaggagaggt 31397404 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cccgcccgcccgcacgcgcgc 40 ||||||||||||||||||||| Sbjct: 24133362 cccgcccgcccgcacgcgcgc 24133342
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaagagc 155 ||||||| | ||||||||| ||||||||| ||||||||||||| Sbjct: 66740 cttcaagatcctgctcatcagggactccggcgtcggcaagagc 66698
>ref|NM_153317.1| Rattus norvegicus RAB8B, member RAS oncogene family (Rab8b), mRNA Length = 740 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 91 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 140
>ref|NM_173413.2| Mus musculus RAB8B, member RAS oncogene family (Rab8b), mRNA Length = 4749 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 79 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 128
>gb|BC059208.1| Mus musculus RAB8B, member RAS oncogene family, mRNA (cDNA clone MGC:66509 IMAGE:6405462), complete cds Length = 4749 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 79 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 128
>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence Length = 242229 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 49738 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 49689
>ref|XM_980344.1| PREDICTED: Mus musculus similar to RAB8B, member RAS oncogene family (LOC670268), mRNA Length = 3161 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 97 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 146
>ref|XM_780231.1| PREDICTED: Strongylocentrotus purpuratus GTPase homolog (rab8), mRNA Length = 655 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggtttaggacaatcac 313 |||||||||||| || |||||||||||||| || |||||||| Sbjct: 211 aatatgggacacagcaggccaggagaggttcagaacaatcac 252
>dbj|AK155621.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730038O22 product:RAB8B, member RAS oncogene family, full insert sequence Length = 2921 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 47 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 96
>gb|AC159741.2| Mus musculus BAC clone RP23-178B21 from chromosome 9, complete sequence Length = 185878 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 138504 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 138455
>dbj|AK084650.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330025I23 product:RAS-RELATED PROTEIN RAB-8B homolog [Rattus norvegicus], full insert sequence Length = 3517 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 47 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 96
>dbj|AK051218.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130018D01 product:RAB8-LIKE (FRAGMENT) homolog [Caenorhabditis elegans], full insert sequence Length = 1981 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 47 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 96
>dbj|AK031251.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930437D16 product:RAS-RELATED PROTEIN RAB-8B homolog [Rattus norvegicus], full insert sequence Length = 2590 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 44 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 93
>gb|U53475.1|RNU53475 Rattus norvegicus GTPase Rab8b (Rab8b) mRNA, complete cds Length = 740 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagcagcctcct 163 |||||| ||||||||||||| ||||||| ||| ||||||| | ||||||| Sbjct: 91 ttcaagctgctgctcatcggcgactccggcgttggcaagacctgcctcct 140
>gb|BC105863.1| Rattus norvegicus cDNA clone MGC:124948 IMAGE:7457017, complete cds Length = 1768 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| |||||||||| Sbjct: 186 atatgggacacagccggccaggagcggtttcggacaatcac 226
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 113 cttcaaggtgctgctcatcggggactccg 141 |||||||||| |||||||||||||||||| Sbjct: 104441 cttcaaggtggtgctcatcggggactccg 104413
>gb|AY815497.1| Schistosoma japonicum SJCHGC05511 protein mRNA, complete cds Length = 1203 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggt 300 |||||||||||| |||||||||||||||| Sbjct: 225 aatatgggacacggctggccaggagaggt 253
>ref|NM_001007161.1| Danio rerio RAB1A, member RAS oncogene family (rab1a), mRNA Length = 1820 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 321 tactacagaggtgctcatggaattatcctagtttatgatgttaca 365 ||||||||||| || ||||||||||| |||| |||||||||||| Sbjct: 379 tactacagaggagcacatggaattattgtagtctatgatgttaca 423
>gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genomic sequence, complete sequence Length = 131589 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 tcatcggggactccgccgtcggcaagagc 155 ||||||||||||||| ||||||||||||| Sbjct: 127519 tcatcggggactccggcgtcggcaagagc 127547
>gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genomic sequence, complete sequence Length = 142896 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 tcatcggggactccgccgtcggcaagagc 155 ||||||||||||||| ||||||||||||| Sbjct: 33610 tcatcggggactccggcgtcggcaagagc 33638
>ref|XM_850035.1| PREDICTED: Canis familiaris similar to Ras-related protein Rab-13 (LOC612294), mRNA Length = 747 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaaga 153 ||||||| ||||||||||||||||||| | ||| ||||||| Sbjct: 159 cttcaagttgctgctcatcggggactcgggcgtgggcaaga 199
>ref|XM_704148.1| PREDICTED: Danio rerio similar to RAB1A, member RAS oncogene family, transcript variant 2 (LOC567081), mRNA Length = 1658 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 321 tactacagaggtgctcatggaattatcctagtttatgatgttaca 365 ||||||||||| || ||||||||||| |||| |||||||||||| Sbjct: 247 tactacagaggagcacatggaattattgtagtctatgatgttaca 291
>ref|XM_684089.1| PREDICTED: Danio rerio similar to RAB1A, member RAS oncogene family, transcript variant 1 (LOC567081), mRNA Length = 1802 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 321 tactacagaggtgctcatggaattatcctagtttatgatgttaca 365 ||||||||||| || ||||||||||| |||| |||||||||||| Sbjct: 391 tactacagaggagcacatggaattattgtagtctatgatgttaca 435
>gb|S53270.1| MEL=RAS-related [mice, mRNA Partial, 638 nt] Length = 638 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| |||||||||| Sbjct: 198 atatgggacacagccggccaggagcggtttcggacaatcac 238
>ref|XM_392967.2| PREDICTED: Apis mellifera similar to CG3320-PA, isoform A (LOC409456), mRNA Length = 2214 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 298 ggtttaggacaatcactagttcttactacagaggtgctcatggaattat 346 ||||||| ||||| || |||||||| ||||||||||| ||||| ||||| Sbjct: 435 ggtttagaacaattacaagttcttattacagaggtgcacatggtattat 483
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 113 cttcaaggtgctgctcatcggggactccg 141 |||||||||| |||||||||||||||||| Sbjct: 27874024 cttcaaggtggtgctcatcggggactccg 27873996 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 |||||| |||| |||||||| |||||| ||||||||||| Sbjct: 259133 ttcaagctgctcctcatcggcgactcctccgtcggcaag 259095 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 25426573 tgggacaccgccggccaggagaggt 25426549
>gb|BC087584.1| Rattus norvegicus RAB8A, member RAS oncogene family, mRNA (cDNA clone IMAGE:7316419), partial cds Length = 1510 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| |||||||||| Sbjct: 17 atatgggacacagccggccaggagcggtttcggacaatcac 57
>gb|BC071176.1| Rattus norvegicus RAB8A, member RAS oncogene family, mRNA (cDNA clone IMAGE:7098881), partial cds Length = 1400 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| |||||||||| Sbjct: 179 atatgggacacagccggccaggagcggtttcggacaatcac 219
>emb|AL929331.15| Zebrafish DNA sequence from clone DKEY-16O9, complete sequence Length = 221062 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 321 tactacagaggtgctcatggaattatcctagtttatgatgttaca 365 ||||||||||| || ||||||||||| |||| |||||||||||| Sbjct: 89331 tactacagaggagcacatggaattattgtagtctatgatgttaca 89287
>dbj|AK109344.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A06, full insert sequence Length = 1091 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactccg 141 |||||||||| |||||||||||||||||| Sbjct: 215 cttcaaggtggtgctcatcggggactccg 243
>dbj|AK111647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132F23, full insert sequence Length = 1059 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 121 tgctgctcatcggggactccgccgtcggcaagagcagcctcctcgtcagcttc 173 |||| |||||||| ||||| | ||||||||||||||| |||||| || ||||| Sbjct: 213 tgctcctcatcggcgactcgggcgtcggcaagagcagtctcctcctccgcttc 265
>emb|AJ234567.1|HVU234567 Hordeum vulgare genomic DNA fragment; clone MWG0812 Length = 1096 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||||||||||||||||| Sbjct: 444 tgggacaccgctggccaggagaggt 468
>dbj|AK104720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A11, full insert sequence Length = 1059 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 121 tgctgctcatcggggactccgccgtcggcaagagcagcctcctcgtcagcttc 173 |||| |||||||| ||||| | ||||||||||||||| |||||| || ||||| Sbjct: 212 tgctcctcatcggcgactcgggcgtcggcaagagcagtctcctcctccgcttc 264
>dbj|AK073075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007H18, full insert sequence Length = 1124 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactccg 141 |||||||||| |||||||||||||||||| Sbjct: 221 cttcaaggtggtgctcatcggggactccg 249
>gb|BC062857.1| Danio rerio RAB1A, member RAS oncogene family, mRNA (cDNA clone MGC:77818 IMAGE:7001559), complete cds Length = 1570 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 321 tactacagaggtgctcatggaattatcctagtttatgatgttaca 365 ||||||||||| || ||||||||||| |||| |||||||||||| Sbjct: 365 tactacagaggagcacatggaattattgtagtctatgatgttaca 409
>gb|BC050239.1| Danio rerio RAB1A, member RAS oncogene family, mRNA (cDNA clone MGC:55751 IMAGE:3816472), complete cds Length = 1820 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 321 tactacagaggtgctcatggaattatcctagtttatgatgttaca 365 ||||||||||| || ||||||||||| |||| |||||||||||| Sbjct: 379 tactacagaggagcacatggaattattgtagtctatgatgttaca 423
>emb|AL772154.4| Zebrafish DNA sequence from clone CH211-101N13 in linkage group 13, complete sequence Length = 173048 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 321 tactacagaggtgctcatggaattatcctagtttatgatgttaca 365 ||||||||||| || ||||||||||| |||| |||||||||||| Sbjct: 14343 tactacagaggagcacatggaattattgtagtctatgatgttaca 14387
>ref|NM_133639.2| Homo sapiens ras homolog gene family, member V (RHOV), mRNA Length = 1167 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 222 cgccgtgggcaagagcagcctcatcgtcagct 253
>ref|XM_544626.2| PREDICTED: Canis familiaris similar to ras homolog gene family, member V (LOC487502), mRNA Length = 1146 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 178 cgccgtgggcaagagcagcctcatcgtcagct 209
>emb|Z73935.1|LJRAB1X L.japonicus mRNA for small GTP-binding protein, RAB1X Length = 1137 Score = 48.1 bits (24), Expect = 0.031 Identities = 75/92 (81%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtttaggacaatcactagttcttactacagaggtgct 335 |||||||| || || ||||| ||||| ||||| | || ||||||||||| ||||| || Sbjct: 300 tgggacacagcgggacaggaaaggttcaggactctaaccagttcttactatagaggagcg 359 Query: 336 catggaattatcctagtttatgatgttacaaa 367 || ||||| || || ||||||||||| ||||| Sbjct: 360 caaggaatcattcttgtttatgatgtcacaaa 391
>gb|BC019353.1| Homo sapiens ras homolog gene family, member V, mRNA (cDNA clone IMAGE:3943661), containing frame-shift errors Length = 765 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 200 cgccgtgggcaagagcagcctcatcgtcagct 231
>gb|BC112945.1| Homo sapiens ras homolog gene family, member V, mRNA (cDNA clone IMAGE:5111021), partial cds Length = 1661 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 196 cgccgtgggcaagagcagcctcatcgtcagct 227
>gb|BC105022.1| Homo sapiens ras homolog gene family, member V, mRNA (cDNA clone MGC:132682 IMAGE:8144025), complete cds Length = 989 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 210 cgccgtgggcaagagcagcctcatcgtcagct 241
>gb|BC105020.1| Homo sapiens ras homolog gene family, member V, mRNA (cDNA clone MGC:132680 IMAGE:8144023), complete cds Length = 989 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 210 cgccgtgggcaagagcagcctcatcgtcagct 241
>emb|CR618466.1| full-length cDNA clone CS0DI031YH01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1595 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 196 cgccgtgggcaagagcagcctcatcgtcagct 227
>emb|CR615243.1| full-length cDNA clone CS0DI005YM22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1518 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 117 cgccgtgggcaagagcagcctcatcgtcagct 148
>emb|CR599960.1| full-length cDNA clone CS0DK009YA21 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1676 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 270 cgccgtgggcaagagcagcctcatcgtcagct 301
>ref|NM_136122.2| Drosophila melanogaster Rab9 CG9994-RA (Rab9), mRNA Length = 1586 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggag 296 |||||||||||||||||||||||| Sbjct: 472 atatgggacaccgctggccaggag 495
>gb|AY059636.1| Homo sapiens Rho family GTPase Chp mRNA, complete cds Length = 711 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 120 cgccgtgggcaagagcagcctcatcgtcagct 151
>gb|AY071139.1| Drosophila melanogaster RE17845 full length cDNA Length = 1599 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggag 296 |||||||||||||||||||||||| Sbjct: 471 atatgggacaccgctggccaggag 494
>gb|AC020661.8| Homo sapiens chromosome 15 clone RP11-540O11 map 15q15, complete sequence Length = 191655 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 9126 cgccgtgggcaagagcagcctcatcgtcagct 9095
>gb|AC099017.1| Drosophila melanogaster, chromosome 2L, region 37D-37E, BAC clone BACR27M12, complete sequence Length = 157766 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggag 296 |||||||||||||||||||||||| Sbjct: 21626 atatgggacaccgctggccaggag 21649
>gb|AC025166.7|AC025166 Homo sapiens chromosome 15 clone CTD-2129N1 map 15q15, complete sequence Length = 115793 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 81644 cgccgtgggcaagagcagcctcatcgtcagct 81613
>gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR28G24, complete sequence Length = 171375 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggag 296 |||||||||||||||||||||||| Sbjct: 127818 atatgggacaccgctggccaggag 127841
>gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71 of 83 of the complete sequence Length = 266205 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggag 296 |||||||||||||||||||||||| Sbjct: 259390 atatgggacaccgctggccaggag 259413
>gb|AF013572.1|AF013572 Bombyx mori small GTP-binding protein (rabB) mRNA, complete cds Length = 952 Score = 48.1 bits (24), Expect = 0.031 Identities = 60/72 (83%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggtttaggacaatcactagttcttactacagagg 331 |||||||||||| ||||| |||||| ||||||| || ||||| || ||||||||||| Sbjct: 301 aatatgggacacagctggacaggagcggtttagaaccatcacctcatcatactacagagg 360 Query: 332 tgctcatggaat 343 || |||||||| Sbjct: 361 agcacatggaat 372
>dbj|AB079131.1| Homo sapiens ARHV mRNA for WRCH1-related GTPase, complete cds Length = 1167 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 140 cgccgtcggcaagagcagcctcctcgtcagct 171 |||||| ||||||||||||||| ||||||||| Sbjct: 222 cgccgtgggcaagagcagcctcatcgtcagct 253
>ref|NM_117859.2| Arabidopsis thaliana RAB1C; GTP binding AT4G17530 (RAB1C) mRNA, complete cds Length = 1410 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 320 ttactacagaggtgctcatggaattat 346 |||||||||||| |||||||||||||| Sbjct: 389 ttactacagaggagctcatggaattat 415
>ref|XM_475071.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 471 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 |||||| |||| |||||||| |||||| ||||||||||| Sbjct: 25 ttcaagctgctcctcatcggcgactcctccgtcggcaag 63
>gb|BT019536.1| Homo sapiens RAB11B, member RAS oncogene family mRNA, complete cds Length = 657 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 34 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 76 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 193 tgggacaccgctggccaggag 213
>gb|BT019535.1| Homo sapiens RAB11B, member RAS oncogene family mRNA, complete cds Length = 657 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 34 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 76 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 193 tgggacaccgctggccaggag 213
>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035J08, complete sequence Length = 117555 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 |||||| |||| |||||||| |||||| ||||||||||| Sbjct: 34653 ttcaagctgctcctcatcggcgactcctccgtcggcaag 34615
>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence Length = 205291 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactc 139 ||||||| ||||||||||||||||||| Sbjct: 116365 cttcaagttgctgctcatcggggactc 116391
>gb|AC024875.1| Caenorhabditis elegans cosmid Y92C3B, complete sequence Length = 26325 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 271 caatatgggacaccgctggccaggagaggtt 301 |||| ||||||||||| |||||||||||||| Sbjct: 20052 caatttgggacaccgccggccaggagaggtt 20022
>emb|Z73936.1|LJRAB1Y L.japonicus mRNA for small GTP-binding protein, RAB1Y Length = 924 Score = 46.1 bits (23), Expect = 0.12 Identities = 65/79 (82%) Strand = Plus / Plus Query: 397 tatgggccaaggaaatagaattgcactcaacgaacaaagagtgcgtcaaaatgcttgttg 456 ||||||| ||||||||||| | | ||||| || |||| ||| |||| |||||||||| Sbjct: 313 tatgggcaaaggaaatagatctttattcaacaaatcaagactgcatcaagatgcttgttg 372 Query: 457 gaaacaaactggacaagga 475 |||||||| | |||||||| Sbjct: 373 gaaacaaagtagacaagga 391 Score = 44.1 bits (22), Expect = 0.48 Identities = 70/86 (81%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtttaggacaatcactagttcttactacagaggtgct 335 ||||| || |||||||| ||||| ||||| ||| | || || |||||||| ||||| || Sbjct: 192 tgggatactgctggccaagagagatttagaacacttacaagctcttactatagaggggca 251 Query: 336 catggaattatcctagtttatgatgt 361 || ||||| ||| | ||||||||||| Sbjct: 252 caaggaatcatcatggtttatgatgt 277
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 320 ttactacagaggtgctcatggaattat 346 |||||||||||| |||||||||||||| Sbjct: 139144 ttactacagaggagctcatggaattat 139118
>emb|X79780.1|HSYPT31 H.sapiens YPT3 mRNA Length = 701 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 40 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 82 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 199 tgggacaccgctggccaggag 219
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 320 ttactacagaggtgctcatggaattat 346 |||||||||||| |||||||||||||| Sbjct: 128509 ttactacagaggagctcatggaattat 128483
>emb|AJ719773.1| Gallus gallus mRNA for hypothetical protein, clone 6g4 Length = 1767 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 320 ttactacagaggtgctcatggaattatcctagtttatgatgttacaa 366 ||||||||||||||| || || |||| || |||||||||||||||| Sbjct: 291 ttactacagaggtgcacagggtgttattctggtttatgatgttacaa 337 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 aaaatgcttgttggaaacaa 463 |||||||||||||||||||| Sbjct: 412 aaaatgcttgttggaaacaa 431
>ref|NM_001006355.1| Gallus gallus RAB18, member RAS oncogene family (RAB18), mRNA Length = 1767 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 320 ttactacagaggtgctcatggaattatcctagtttatgatgttacaa 366 ||||||||||||||| || || |||| || |||||||||||||||| Sbjct: 291 ttactacagaggtgcacagggtgttattctggtttatgatgttacaa 337 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 aaaatgcttgttggaaacaa 463 |||||||||||||||||||| Sbjct: 412 aaaatgcttgttggaaacaa 431
>emb|BX647356.1|HSM807500 Homo sapiens mRNA; cDNA DKFZp686E23256 (from clone DKFZp686E23256) Length = 4328 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 2132 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 2174 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 2291 tgggacaccgctggccaggag 2311
>emb|CR626645.1| full-length cDNA clone CS0DF009YF12 of Fetal brain of Homo sapiens (human) Length = 1568 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 106 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 265 tgggacaccgctggccaggag 285
>emb|CR626143.1| full-length cDNA clone CS0DC025YN21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1513 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 51 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 93 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 210 tgggacaccgctggccaggag 230
>emb|CR625102.1| full-length cDNA clone CS0DI043YG14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1516 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 79 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 121 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 238 tgggacaccgctggccaggag 258
>emb|CR624386.1| full-length cDNA clone CS0DI036YM17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1432 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 74 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 116 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 233 tgggacaccgctggccaggag 253
>emb|CR621845.1| full-length cDNA clone CS0DM009YH13 of Fetal liver of Homo sapiens (human) Length = 1520 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 89 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 131 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 248 tgggacaccgctggccaggag 268
>emb|CR620665.1| full-length cDNA clone CS0DI043YL09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1489 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 107 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 149 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 266 tgggacaccgctggccaggag 286
>emb|CR618667.1| full-length cDNA clone CS0DF019YH19 of Fetal brain of Homo sapiens (human) Length = 1509 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 71 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 113 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 230 tgggacaccgctggccaggag 250
>emb|CR618647.1| full-length cDNA clone CS0DB001YO22 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1522 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 34 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 76 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 193 tgggacaccgctggccaggag 213
>emb|CR613165.1| full-length cDNA clone CS0DF009YE08 of Fetal brain of Homo sapiens (human) Length = 1444 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 67 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 109 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 226 tgggacaccgctggccaggag 246
>emb|CR609776.1| full-length cDNA clone CS0DI016YA05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1108 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 39 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 81 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 198 tgggacaccgctggccaggag 218
>emb|CR606883.1| full-length cDNA clone CS0DC005YE07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1535 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 51 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 93 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 210 tgggacaccgctggccaggag 230
>emb|CR606224.1| full-length cDNA clone CS0DI084YB14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1462 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 105 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 147 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 264 tgggacaccgctggccaggag 284
>emb|CR605393.1| full-length cDNA clone CS0DI061YI16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1581 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 116 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 158 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 275 tgggacaccgctggccaggag 295
>emb|CR600800.1| full-length cDNA clone CS0DI019YH19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1444 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 24 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 66 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 183 tgggacaccgctggccaggag 203
>emb|CR600179.1| full-length cDNA clone CS0DI018YH16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1378 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 71 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 113 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 230 tgggacaccgctggccaggag 250
>emb|CR597131.1| full-length cDNA clone CS0DH001YC15 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1346 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 58 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 100 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 217 tgggacaccgctggccaggag 237
>emb|CR594452.1| full-length cDNA clone CS0CAP008YH11 of Thymus of Homo sapiens (human) Length = 1378 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 78 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 120 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 237 tgggacaccgctggccaggag 257
>emb|CR593439.1| full-length cDNA clone CS0DF030YO19 of Fetal brain of Homo sapiens (human) Length = 1502 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 27 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 69 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 186 tgggacaccgctggccaggag 206
>emb|CR593189.1| full-length cDNA clone CL0BA003ZE06 of Placenta of Homo sapiens (human) Length = 1530 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 31 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 73 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 190 tgggacaccgctggccaggag 210
>emb|CR592281.1| full-length cDNA clone CS0DF006YF01 of Fetal brain of Homo sapiens (human) Length = 1596 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 106 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 265 tgggacaccgctggccaggag 285
>emb|CR592057.1| full-length cDNA clone CS0DC023YD19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1390 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 106 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 265 tgggacaccgctggccaggag 285
>emb|CR590650.1| full-length cDNA clone CS0DA005YP15 of Neuroblastoma of Homo sapiens (human) Length = 1525 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 75 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 117 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 234 tgggacaccgctggccaggag 254
>gb|AC096622.14| Mus musculus strain 129/SvJ clone mgs1-182e11, complete sequence Length = 131919 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 113 cttcaaggtgctgctcatcggggactc 139 ||||||| ||||||||||||||||||| Sbjct: 50266 cttcaagttgctgctcatcggggactc 50240
>gb|AF498947.1| Homo sapiens small GTP binding protein RAB11B (RAB11B) mRNA, complete cds Length = 657 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 34 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 76 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 193 tgggacaccgctggccaggag 213
>gb|AY060495.1| Arabidopsis thaliana AT4g17530/dl4800c mRNA, complete cds Length = 609 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 320 ttactacagaggtgctcatggaattat 346 |||||||||||| |||||||||||||| Sbjct: 228 ttactacagaggagctcatggaattat 254
>emb|CR541691.1| Homo sapiens full open reading frame cDNA clone RZPDo834D1128D for gene RAB11B, RAB11B, member RAS oncogene family; complete cds, without stopcodon Length = 654 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 34 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 76 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 193 tgggacaccgctggccaggag 213
>emb|CR536494.1| Homo sapiens full open reading frame cDNA clone RZPDo834G1017D for gene RAB11B, RAB11B, member RAS oncogene family; complete cds, incl. stopcodon Length = 657 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 34 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 76 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 193 tgggacaccgctggccaggag 213
>dbj|AB169492.1| Macaca fascicularis brain cDNA, clone: QccE-10967, similar to human RAB11B, member RAS oncogene family (RAB11B), mRNA, RefSeq: NM_004218.1 Length = 1642 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 100 ttcaaagtggtgctcatcggggactcgggcgtgggcaagagca 142
>gb|AY052204.1| Arabidopsis thaliana AT4g17530/dl4800c mRNA, complete cds Length = 938 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 320 ttactacagaggtgctcatggaattat 346 |||||||||||| |||||||||||||| Sbjct: 389 ttactacagaggagctcatggaattat 415
>dbj|AK002303.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610007N03 product:RAB13, MEMBER RAS ONCOGENE FAMILY homolog [Homo sapiens], full insert sequence Length = 1073 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactc 139 ||||||| ||||||||||||||||||| Sbjct: 106 cttcaagttgctgctcatcggggactc 132
>ref|NM_171861.3| Caenorhabditis elegans RAB family member (rab-18) (rab-18) mRNA, complete cds Length = 586 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 271 caatatgggacaccgctggccaggagaggtt 301 |||| ||||||||||| |||||||||||||| Sbjct: 111 caatttgggacaccgccggccaggagaggtt 141
>ref|NM_171081.2| Caenorhabditis elegans RAB family member (rab-18) (rab-18) mRNA, complete cds Length = 816 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 271 caatatgggacaccgctggccaggagaggtt 301 |||| ||||||||||| |||||||||||||| Sbjct: 188 caatttgggacaccgccggccaggagaggtt 218
>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete sequence Length = 196824 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactc 139 ||||||| ||||||||||||||||||| Sbjct: 86632 cttcaagttgctgctcatcggggactc 86658
>ref|NM_026677.1| Mus musculus RAB13, member RAS oncogene family (Rab13), mRNA Length = 1073 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactc 139 ||||||| ||||||||||||||||||| Sbjct: 106 cttcaagttgctgctcatcggggactc 132
>gb|AY888214.1| Synthetic construct Homo sapiens clone FLH010496.01X RAB11B member RAS oncogene family (RAB11B) mRNA, complete cds Length = 657 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 34 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 76 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 193 tgggacaccgctggccaggag 213
>gb|AY894025.1| Synthetic construct Homo sapiens clone FLH131057.01L RAB11B member RAS oncogene family (RAB11B) mRNA, partial cds Length = 657 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 34 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 76 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 193 tgggacaccgctggccaggag 213
>gb|AF127134.1|AF127134 Arabidopsis thaliana ras-related small GTP-binding protein (RAB1c) mRNA, complete cds Length = 950 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 320 ttactacagaggtgctcatggaattat 346 |||||||||||| |||||||||||||| Sbjct: 381 ttactacagaggagctcatggaattat 407
>gb|BC027214.1| Mus musculus RAB13, member RAS oncogene family, mRNA (cDNA clone MGC:25544 IMAGE:3709140), complete cds Length = 1118 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactc 139 ||||||| ||||||||||||||||||| Sbjct: 132 cttcaagttgctgctcatcggggactc 158
>gb|AY111070.1| Zea mays CL9832_1 mRNA sequence Length = 987 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 ||||||||| |||| ||||||||||| | |||||||||| Sbjct: 775 ttcaaggtggtgctgatcggggactcgggcgtcggcaag 737
>emb|CR762280.2| Xenopus tropicalis finished cDNA, clone TGas029m23 Length = 865 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggttta 303 ||||||||||| ||||||||||||| ||||| Sbjct: 497 atatgggacacagctggccaggagaagttta 527
>gb|AC171013.3| Gallus gallus BAC clone CH261-71N5 from chromosome ul, complete sequence Length = 196838 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 61 ggcccggcgcggcggccatgggc 83 ||||||||||||||||||||||| Sbjct: 34134 ggcccggcgcggcggccatgggc 34112
>dbj|AK113887.1| Ciona intestinalis cDNA, clone:cicl015g06, full insert sequence Length = 1257 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 271 caatatgggacaccgctggccaggagaggtt 301 ||||||||||||||||||| ||||| ||||| Sbjct: 301 caatatgggacaccgctggtcaggaaaggtt 331
>gb|BC110081.1| Homo sapiens RAB11B, member RAS oncogene family, mRNA (cDNA clone MGC:133246 IMAGE:40035112), complete cds Length = 696 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 36 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 78 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 195 tgggacaccgctggccaggag 215
>ref|NM_004218.1| Homo sapiens RAB11B, member RAS oncogene family (RAB11B), mRNA Length = 701 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 40 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 82 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 199 tgggacaccgctggccaggag 219
>emb|CT033345.1| Platynereis dumerilii EST IB0AAA22BC03EM1 Length = 875 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 300 tttaggacaatcactagttcttactacagaggtgc 334 |||||| | |||||||| ||||||||||||||||| Sbjct: 245 tttaggtctatcactaggtcttactacagaggtgc 279
>emb|CT485723.1| Xenopus tropicalis finished cDNA, clone TGas043g15 Length = 864 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggttta 303 ||||||||||| ||||||||||||| ||||| Sbjct: 497 atatgggacacagctggccaggagaagttta 527
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaag 152 |||||| |||| |||||||| |||||| ||||||||||| Sbjct: 141317 ttcaagctgctcctcatcggcgactcctccgtcggcaag 141279
>dbj|D38516.1|HUMRAB11B Human Rab11B mRNA Length = 698 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 ttcaaggtgctgctcatcggggactccgccgtcggcaagagca 156 ||||| ||| |||||||||||||||| | ||| |||||||||| Sbjct: 43 ttcaaagtggtgctcatcggggactcaggcgtgggcaagagca 85 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 202 tgggacaccgctggccaggag 222
>gb|BC074609.1| Xenopus tropicalis RAB30, member RAS oncogene family, mRNA (cDNA clone MGC:69471 IMAGE:5336103), complete cds Length = 1414 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||| ||||||||||||||||| Sbjct: 359 tgggacacggctggccaggagaggtt 384
>ref|NM_133685.1| Mus musculus RAB31, member RAS oncogene family (Rab31), mRNA Length = 3416 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 ||||||||||||||||||||| |||| Sbjct: 315 tgggacaccgctggccaggagcggtt 340
>gb|BC075980.1| Danio rerio zgc:92276, mRNA (cDNA clone MGC:92276 IMAGE:7053296), complete cds Length = 2370 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggtttaggacaatcac 313 |||||||||||| ||||| |||||||||| ||||| ||||| Sbjct: 240 aatatgggacactgctgggcaggagaggtacaggaccatcac 281
>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence Length = 170975 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggtt 301 ||||||||||||||| ||||||||| |||| Sbjct: 55867 aatatgggacaccgccggccaggagcggtt 55896
>ref|XM_881629.1| PREDICTED: Bos taurus similar to Ras-related protein Rab-26, transcript variant 3 (LOC515675), mRNA Length = 2821 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||| ||||||||||||||||| Sbjct: 154 tgggacacggctggccaggagaggtt 179
>ref|XM_868411.1| PREDICTED: Bos taurus similar to Ras-related protein Rab-26, transcript variant 2 (LOC515675), mRNA Length = 2915 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||| ||||||||||||||||| Sbjct: 352 tgggacacggctggccaggagaggtt 377
>gb|BC114066.1| Bos taurus RAB26, member RAS oncogene family, mRNA (cDNA clone MGC:137742 IMAGE:8165990), complete cds Length = 1933 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||| ||||||||||||||||| Sbjct: 512 tgggacacggctggccaggagaggtt 537
>ref|XM_791125.1| PREDICTED: Strongylocentrotus purpuratus similar to RAB8B, member RAS oncogene family (LOC591568), partial mRNA Length = 448 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggtt 301 |||||||||||| || |||||||||||||| Sbjct: 189 aatatgggacacagcaggccaggagaggtt 218
>ref|NM_001006108.1| Xenopus tropicalis RAB30, member RAS oncogene family (rsb30), mRNA Length = 1414 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||| ||||||||||||||||| Sbjct: 359 tgggacacggctggccaggagaggtt 384
>gb|BC013063.1| Mus musculus RAB31, member RAS oncogene family, mRNA (cDNA clone MGC:7715 IMAGE:3497938), complete cds Length = 3416 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 ||||||||||||||||||||| |||| Sbjct: 315 tgggacaccgctggccaggagcggtt 340
>ref|NM_001003419.1| Danio rerio zgc:92276 (zgc:92276), mRNA Length = 2370 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggtttaggacaatcac 313 |||||||||||| ||||| |||||||||| ||||| ||||| Sbjct: 240 aatatgggacactgctgggcaggagaggtacaggaccatcac 281
>ref|NM_078695.2| Drosophila melanogaster Rab-protein 10 CG17060-RA (Rab10), mRNA Length = 2249 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggtt 301 ||||||||||||||| ||||||||| |||| Sbjct: 437 aatatgggacaccgccggccaggagcggtt 466
>dbj|AK159095.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420001G12 product:Similar to RAB31, member RAS oncogene family, full insert sequence Length = 3364 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 ||||||||||||||||||||| |||| Sbjct: 275 tgggacaccgctggccaggagcggtt 300
>dbj|AK156677.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830037B14 product:Similar to RAB31, member RAS oncogene family, full insert sequence Length = 3474 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 ||||||||||||||||||||| |||| Sbjct: 387 tgggacaccgctggccaggagcggtt 412
>gb|AY060425.1| Drosophila melanogaster LD39986 full length cDNA Length = 2349 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggtt 301 ||||||||||||||| ||||||||| |||| Sbjct: 437 aatatgggacaccgccggccaggagcggtt 466
>dbj|AK051270.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130027D07 product:GTP-BINDING PROTEIN RAB0 homolog [Rattus norvegicus], full insert sequence Length = 3392 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 ||||||||||||||||||||| |||| Sbjct: 306 tgggacaccgctggccaggagcggtt 331
>gb|BC103395.1| Bos taurus RAB34, member RAS oncogene family, mRNA (cDNA clone MGC:127952 IMAGE:7954326), complete cds Length = 1750 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||||||||| ||||||||||| Sbjct: 652 tgggacaccgctggacaggagaggtt 677
>gb|AC156290.10| Mus musculus 6 BAC RP24-267I24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 144883 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 gcggcggccatgggctcgacgc 90 |||||||||||||||||||||| Sbjct: 30943 gcggcggccatgggctcgacgc 30964
>gb|AC012356.6| Homo sapiens BAC clone RP11-308G12 from 2, complete sequence Length = 112527 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 332 tgctcatggaattatcctagtt 353 |||||||||||||||||||||| Sbjct: 104961 tgctcatggaattatcctagtt 104982
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 atgcttgttggaaacaaactgg 468 |||||||||||||||||||||| Sbjct: 21773 atgcttgttggaaacaaactgg 21752
>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454H12 Length = 161004 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 atgcttgttggaaacaaactgg 468 |||||||||||||||||||||| Sbjct: 151581 atgcttgttggaaacaaactgg 151560
>gb|AF058807.1|AF058807 Bos taurus GTP-binding protein rah mRNA, partial cds Length = 1058 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||||||||| ||||||||||| Sbjct: 163 tgggacaccgctggacaggagaggtt 188
>emb|CR848349.2| Xenopus tropicalis finished cDNA, clone TNeu085g12 Length = 2936 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||| ||||||||||||||||| Sbjct: 1910 tgggacacagctggccaggagaggtt 1935
>gb|AE003572.4| Drosophila melanogaster chromosome X, section 67 of 74 of the complete sequence Length = 91383 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggtt 301 ||||||||||||||| ||||||||| |||| Sbjct: 24421 aatatgggacaccgccggccaggagcggtt 24450
>emb|CR926288.2| Xenopus tropicalis finished cDNA, clone TEgg143e20 Length = 2054 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||| ||||||||||||||||| Sbjct: 1027 tgggacacagctggccaggagaggtt 1052
>gb|AY518268.1| Sus scrofa RAB6B gene, exons 3, 4 and partial cds Length = 313 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||| ||||||||||||||||| Sbjct: 263 tgggacacagctggccaggagaggtt 288
>ref|NM_001033612.1| Bos taurus RAB34, member RAS oncogene family (RAB34), mRNA Length = 1750 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtt 301 |||||||||||||| ||||||||||| Sbjct: 652 tgggacaccgctggacaggagaggtt 677
>dbj|AB006189.1| Drosophila melanogaster mRNA for Rab10, complete cds Length = 1613 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 272 aatatgggacaccgctggccaggagaggtt 301 ||||||||||||||| ||||||||| |||| Sbjct: 439 aatatgggacaccgccggccaggagcggtt 468
>ref|XM_524087.1| PREDICTED: Pan troglodytes similar to RAB11B, member RAS oncogene family (LOC468700), mRNA Length = 2202 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 1348 tgggacaccgctggccaggag 1368 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 124 tgctcatcggggactccgccgtcggcaagagca 156 |||||||||||||||| | ||| |||||||||| Sbjct: 1199 tgctcatcggggactcaggcgtgggcaagagca 1231
>ref|XM_475714.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 211 tgggacaccgccggccaggagaggt 235
>gb|DQ213991.1| Taeniopygia guttata clone 0058P0055B02 RAN member RAS oncogene family variant 1-like mRNA, complete sequence Length = 1133 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 tatgggacaccgctggccaggagaggttt 302 |||||||||| ||||||||||||| |||| Sbjct: 265 tatgggacacagctggccaggagaagttt 293
>gb|DQ213990.1| Taeniopygia guttata clone 0058P0027G11 RAN member RAS oncogene family variant 1-like mRNA, complete sequence Length = 1103 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 tatgggacaccgctggccaggagaggttt 302 |||||||||| ||||||||||||| |||| Sbjct: 235 tatgggacacagctggccaggagaagttt 263
>gb|DQ213989.1| Taeniopygia guttata clone 0058P0032F02 RAN member RAS oncogene family variant 1-like mRNA, complete sequence Length = 900 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 tatgggacaccgctggccaggagaggttt 302 |||||||||| ||||||||||||| |||| Sbjct: 232 tatgggacacagctggccaggagaagttt 260
>gb|DQ213988.1| Taeniopygia guttata clone 0058P0003D04 RAN member RAS oncogene family variant 1-like mRNA, complete sequence Length = 1107 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 tatgggacaccgctggccaggagaggttt 302 |||||||||| ||||||||||||| |||| Sbjct: 232 tatgggacacagctggccaggagaagttt 260
>ref|NM_001031097.1| Gallus gallus RAB10, member RAS oncogene family (RAB10), mRNA Length = 3247 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaaga 153 ||||||| ||||||| ||||||||||| | |||||||||| Sbjct: 378 cttcaagctgctgctgatcggggactcgggggtcggcaaga 418
>ref|XM_450547.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1200 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 321 tgggacaccgccggccaggagaggt 345
>gb|BC077884.1| Xenopus laevis RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:80674 IMAGE:5511069), complete cds Length = 2153 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtt 301 ||||||||||| ||||| ||||||||||| Sbjct: 288 atatgggacacagctgggcaggagaggtt 316
>ref|XM_429101.1| PREDICTED: Gallus gallus similar to RAB11a, member RAS oncogene family (LOC431549), partial mRNA Length = 323 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 124 tgctcatcggggactccgccgtcggcaagagca 156 |||||||||||||||||| ||| || ||||||| Sbjct: 4 tgctcatcggggactccggcgtggggaagagca 36
>ref|XM_598573.2| PREDICTED: Bos taurus similar to RAS and EF hand domain containing (LOC520334), mRNA Length = 2367 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 |||||||| |||||||||||||||| Sbjct: 1960 tgggacacagctggccaggagaggt 1984
>gb|BC021307.1| Mus musculus ras homolog gene family, member V, mRNA (cDNA clone MGC:29297 IMAGE:5003249), complete cds Length = 1705 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ggcaagagcagcctcctcgtcagct 171 ||||||||||||||| ||||||||| Sbjct: 235 ggcaagagcagcctcatcgtcagct 259
>ref|NM_145530.1| Mus musculus ras homolog gene family, member V (Rhov), mRNA Length = 1705 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ggcaagagcagcctcctcgtcagct 171 ||||||||||||||| ||||||||| Sbjct: 235 ggcaagagcagcctcatcgtcagct 259
>gb|AC139751.2| Mus musculus BAC clone RP24-403E24 from chromosome 17, complete sequence Length = 183224 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 90462 tgggacaccgctggccaggag 90482
>ref|XM_659486.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6974.2), mRNA Length = 621 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| ||||| |||||| | ||||| |||||||| Sbjct: 187 atatgggacacagctgggcaggagcgatttagaacaatcac 227
>ref|NM_023126.2| Mus musculus RAB8A, member RAS oncogene family (Rab8a), mRNA Length = 2012 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| | |||||||| Sbjct: 340 atatgggacacggccggccaggagcggtttcgaacaatcac 380
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 66934 tgggacaccgccggccaggagaggt 66910
>gb|BC063736.1| Xenopus laevis hypothetical protein MGC68722, mRNA (cDNA clone MGC:68722 IMAGE:4057038), complete cds Length = 2348 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 121 tgctgctcatcggggactccgccgtcggcaaga 153 |||| |||||||||||||||| |||||||||| Sbjct: 169 tgctcctcatcggggactccggggtcggcaaga 201
>emb|Z81521.1|CEF32A11 Caenorhabditis elegans Cosmid F32A11, complete sequence Length = 39356 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 220 tggattttaaaatcaagtttctcactgtt 248 ||||||||||||||| ||||||| ||||| Sbjct: 36040 tggattttaaaatcatgtttctccctgtt 36012
>emb|CR717350.2|CNS0GGGC Tetraodon nigroviridis full-length cDNA Length = 871 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || || ||||||||||| ||||| ||||| Sbjct: 189 atatgggacacagcaggacaggagaggttcaggaccatcac 229
>gb|AC153489.7| Mus musculus 10 BAC RP23-95A4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209653 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 ttttaaaatcaagtttctcac 244 ||||||||||||||||||||| Sbjct: 133457 ttttaaaatcaagtttctcac 133477
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 gcccgcacgcgcgcgattcga 47 ||||||||||||||||||||| Sbjct: 78227 gcccgcacgcgcgcgattcga 78247
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ggcccggcgcggcggccatgg 81 ||||||||||||||||||||| Sbjct: 5154837 ggcccggcgcggcggccatgg 5154817
>emb|Z46611.1|RCBLUGNS R.capsulatus cobU, cobP, bluB, bluC, bluD, bluE, bluF cobQ genes Length = 6426 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 54 ccgcccaggcccggcgcggcggccatgggctcg 86 ||||||| | ||||||||||||||||| ||||| Sbjct: 5320 ccgcccatgtccggcgcggcggccatgtgctcg 5288
>emb|Y08425.1|NP43GTP N.plumbaginifolia mRNA for small GTP-binding protein, clone Np43GTP Length = 1008 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 caccataggggtggattttaaaatc 233 |||||| |||||||||||||||||| Sbjct: 259 caccatcggggtggattttaaaatc 283
>emb|X72690.1|LSRAB18A L.stagnalis LS-rab18a mRNA Length = 719 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 264 aagttgacaatatgggacaccgctggccaggagaggtttag 304 |||||| ||||||||||||| || |||||||| || ||||| Sbjct: 267 aagttggcaatatgggacacagcgggccaggaaagatttag 307
>emb|X66906.1|GGRLPA G.gallus mRNA for ras-like protein Length = 981 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 tatgggacaccgctggccaggagaggttt 302 |||||||||| ||||||||||||| |||| Sbjct: 201 tatgggacacagctggccaggagaagttt 229
>ref|NM_001016372.2| Xenopus tropicalis RAB15, member RAS onocogene family (rab15), mRNA Length = 2620 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 121 tgctgctcatcggggactccgccgtcggcaaga 153 |||| |||||||||||||||| |||||| |||| Sbjct: 114 tgctcctcatcggggactccggcgtcgggaaga 146
>gb|BC086990.1| Rattus norvegicus ras homolog gene family, member V, mRNA (cDNA clone MGC:93183 IMAGE:7135643), complete cds Length = 1741 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ggcaagagcagcctcctcgtcagct 171 ||||||||||||||| ||||||||| Sbjct: 274 ggcaagagcagcctcatcgtcagct 298
>gb|AF532626.1| Glycine max small GTP-binding protein mRNA, complete cds Length = 1263 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 |||||||||||||||||||| |||| Sbjct: 329 tgggacaccgctggccaggaaaggt 353
>ref|NM_205258.1| Gallus gallus RAN, member RAS oncogene family (RAN), mRNA Length = 981 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 tatgggacaccgctggccaggagaggttt 302 |||||||||| ||||||||||||| |||| Sbjct: 201 tatgggacacagctggccaggagaagttt 229
>emb|AJ720699.1| Gallus gallus mRNA for hypothetical protein, clone 23k10 Length = 3247 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactccgccgtcggcaaga 153 ||||||| ||||||| ||||||||||| | |||||||||| Sbjct: 378 cttcaagctgctgctgatcggggactcgggggtcggcaaga 418
>emb|CR613277.1| full-length cDNA clone CS0DC001YK14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1458 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 153 tgggacaccgctggccaggag 173 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 124 tgctcatcggggactccgccgtcggcaagagca 156 |||||||||||||||| | ||| |||||||||| Sbjct: 4 tgctcatcggggactcaggcgtgggcaagagca 36
>emb|CR596517.1| full-length cDNA clone CS0DN003YC06 of Adult brain of Homo sapiens (human) Length = 1480 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 155 tgggacaccgctggccaggag 175 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 124 tgctcatcggggactccgccgtcggcaagagca 156 |||||||||||||||| | ||| |||||||||| Sbjct: 6 tgctcatcggggactcaggcgtgggcaagagca 38
>dbj|AK147178.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920194N02 product:RAB8A, member RAS oncogene family, full insert sequence Length = 1238 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| | |||||||| Sbjct: 208 atatgggacacggccggccaggagcggtttcgaacaatcac 248
>dbj|AK165690.1| Mus musculus bone marrow stroma cell CRL-2028 SR-4987 cDNA, RIKEN full-length enriched library, clone:G4D0009D21 product:RAB8A, member RAS oncogene family, full insert sequence Length = 1356 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| | |||||||| Sbjct: 203 atatgggacacggccggccaggagcggtttcgaacaatcac 243
>gb|DQ399904.1| Nocardiopsis sp. 90127 plasmid pSQ10, complete sequence Length = 18219 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ccaccgcccaggcccggcgcg 71 ||||||||||||||||||||| Sbjct: 14293 ccaccgcccaggcccggcgcg 14313
>gb|AC092300.2| Homo sapiens chromosome 19 clone LLNLF-176H4, complete sequence Length = 45303 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 34286 tgggacaccgctggccaggag 34306 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 124 tgctcatcggggactccgccgtcggcaagagca 156 |||||||||||||||| | ||| |||||||||| Sbjct: 34137 tgctcatcggggactcaggcgtgggcaagagca 34169
>dbj|AK010862.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2500003F08 product:cell line NK14 derived transforming oncogene, full insert sequence Length = 1345 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| | |||||||| Sbjct: 191 atatgggacacggccggccaggagcggtttcgaacaatcac 231
>dbj|AK009259.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310009O21 product:cell line NK14 derived transforming oncogene, full insert sequence Length = 1336 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| | |||||||| Sbjct: 191 atatgggacacggccggccaggagcggtttcgaacaatcac 231
>dbj|AK080740.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930028D15 product:cell line NK14 derived transforming oncogene, full insert sequence Length = 1779 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| | |||||||| Sbjct: 192 atatgggacacggccggccaggagcggtttcgaacaatcac 232
>dbj|AK079306.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630001I24 product:cell line NK14 derived transforming oncogene, full insert sequence Length = 4419 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| | |||||||| Sbjct: 207 atatgggacacggccggccaggagcggtttcgaacaatcac 247
>dbj|AK076048.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700008D04 product:cell line NK14 derived transforming oncogene, full insert sequence Length = 1885 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| | |||||||| Sbjct: 219 atatgggacacggccggccaggagcggtttcgaacaatcac 259
>dbj|AK037170.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched library, clone:A030005A06 product:RHO FAMILY GTPASE CHP homolog [Homo sapiens], full insert sequence Length = 1657 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ggcaagagcagcctcctcgtcagct 171 ||||||||||||||| ||||||||| Sbjct: 232 ggcaagagcagcctcatcgtcagct 256
>dbj|AK036775.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930007D06 product:CDC42 HOMOLOG PROTEIN CHP homolog [Rattus norvegicus], full insert sequence Length = 1656 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ggcaagagcagcctcctcgtcagct 171 ||||||||||||||| ||||||||| Sbjct: 231 ggcaagagcagcctcatcgtcagct 255
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 9592623 tgggacaccgccggccaggagaggt 9592599
>ref|NM_138542.2| Rattus norvegicus ras homolog gene family, member V (Rhov), mRNA Length = 1741 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ggcaagagcagcctcctcgtcagct 171 ||||||||||||||| ||||||||| Sbjct: 274 ggcaagagcagcctcatcgtcagct 298
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cccgcccgcccgcacgcgcgc 40 ||||||||||||||||||||| Sbjct: 109184 cccgcccgcccgcacgcgcgc 109164
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 151663 tgggacaccgccggccaggagaggt 151687
>gb|AC019048.7| Homo sapiens BAC clone RP11-90J22 from 2, complete sequence Length = 119481 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 aatcaagtttctcactgttgg 250 ||||||||||||||||||||| Sbjct: 86925 aatcaagtttctcactgttgg 86905
>gb|AC010323.8| Homo sapiens chromosome 19 clone CTD-2550O8, complete sequence Length = 166618 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 150166 tgggacaccgctggccaggag 150186 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 124 tgctcatcggggactccgccgtcggcaagagca 156 |||||||||||||||| | ||| |||||||||| Sbjct: 150017 tgctcatcggggactcaggcgtgggcaagagca 150049
>gb|AC136469.2| Homo sapiens chromosome 19 clone RP11-886P16, complete sequence Length = 147180 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 124 tgctcatcggggactccgccgtcggcaagagca 156 |||||||||||||||| | ||| |||||||||| Sbjct: 97682 tgctcatcggggactcaggcgtgggcaagagca 97650 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 97533 tgggacaccgctggccaggag 97513
>gb|AC160764.2| Ornithorhynchus anatinus BAC clone OABb-454A1 from chromosome unknown, complete sequence Length = 125050 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 ggcaagagcagcctcctcgtcagct 171 ||||||||||||||| ||||||||| Sbjct: 80603 ggcaagagcagcctcatcgtcagct 80579
>gb|AY974570.1| Mus musculus RAB8A member RAS oncogene family-like (Rab8a) mRNA, partial sequence Length = 519 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| | |||||||| Sbjct: 159 atatgggacacggccggccaggagcggtttcgaacaatcac 199
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 32720 tgggacaccgccggccaggagaggt 32696
>dbj|AK071461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092H24, full insert sequence Length = 1200 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 321 tgggacaccgccggccaggagaggt 345
>dbj|AK066450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061B07, full insert sequence Length = 3356 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 328 tgggacaccgccggccaggagaggt 352
>dbj|AK061969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H05, full insert sequence Length = 968 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 263 tgggacaccgccggccaggagaggt 287
>dbj|AK060246.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-H10, full insert sequence Length = 1344 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 254 tgggacaccgccggccaggagaggt 278
>gb|AY110177.1| Zea mays CL8907_1 mRNA sequence Length = 659 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 599 tgggacaccgccggccaggagaggt 575
>gb|AY110109.1| Zea mays CL16448_2 mRNA sequence Length = 958 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 268 tgggacaccgccggccaggagaggt 292
>gb|AY104562.1| Zea mays PCO063085 mRNA sequence Length = 1170 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggt 300 ||||||||||| ||||||||||||| Sbjct: 453 tgggacaccgccggccaggagaggt 477
>gb|AY104866.1| Zea mays PCO122462 mRNA sequence Length = 1057 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 113 cttcaaggtgctgctcatcggggactccg 141 ||||||| |||| |||||||||||||||| Sbjct: 223 cttcaagctgctcctcatcggggactccg 251
>emb|CR761272.2| Xenopus tropicalis finished cDNA, clone TEgg119f07 Length = 2620 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 121 tgctgctcatcggggactccgccgtcggcaaga 153 |||| |||||||||||||||| |||||| |||| Sbjct: 114 tgctcctcatcggggactccggcgtcgggaaga 146
>gb|AY880324.1| Gekko japonicus GekBS093P mRNA, complete cds Length = 1590 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 264 aagttgacaatatgggacaccgctggccaggagaggtttag 304 |||||| |||| |||||||||||||| ||||| ||||||| Sbjct: 214 aagttggcaatctgggacaccgctggtcaggaacggtttag 254
>emb|CT010481.8| M.truncatula DNA sequence from clone MTH2-62G7 on chromosome 3, complete sequence Length = 113400 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 caatcactagttcttactacagagg 331 |||||||||| |||||||||||||| Sbjct: 91471 caatcactagatcttactacagagg 91495
>gb|AF097887.1|AF097887 Rattus norvegicus Chp mRNA, complete cds Length = 1230 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ggcaagagcagcctcctcgtcagct 171 ||||||||||||||| ||||||||| Sbjct: 229 ggcaagagcagcctcatcgtcagct 253
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 ccaggcccggcgcggcggcca 78 ||||||||||||||||||||| Sbjct: 597040 ccaggcccggcgcggcggcca 597020
>emb|AL929318.11| Mouse DNA sequence from clone RP23-46P4 on chromosome 2, complete sequence Length = 164816 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 ggcaagagcagcctcctcgtcagct 171 ||||||||||||||| ||||||||| Sbjct: 58813 ggcaagagcagcctcatcgtcagct 58789
>gb|AC122515.5| Mus musculus BAC clone RP24-455N18 from 9, complete sequence Length = 164271 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 aatcaagtttctcactgttgg 250 ||||||||||||||||||||| Sbjct: 61285 aatcaagtttctcactgttgg 61305
>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome Length = 189370 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 54 ccgcccaggcccggcgcggcggccatgggctcg 86 ||||||| | ||||||||||||||||| ||||| Sbjct: 103420 ccgcccatgtccggcgcggcggccatgtgctcg 103388
>gb|BC019990.1| Mus musculus RAB8A, member RAS oncogene family, mRNA (cDNA clone MGC:28462 IMAGE:4161110), complete cds Length = 1337 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 atatgggacaccgctggccaggagaggtttaggacaatcac 313 ||||||||||| || ||||||||| ||||| | |||||||| Sbjct: 181 atatgggacacggccggccaggagcggtttcgaacaatcac 221
>emb|AL845167.7| Mouse DNA sequence from clone RP23-36P16 on chromosome X, complete sequence Length = 162237 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 486 atggtaacaacagaagaaggtcttgcctt 514 |||||| |||||||| ||||||||||||| Sbjct: 33391 atggtatcaacagaacaaggtcttgcctt 33363
>gb|U17085.1|TBU17085 Trypanosoma brucei brucei RAN/TC4 GTPase homolog rtb2 mRNA, partial cds Length = 513 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggag 296 ||||||||||||||||||||| Sbjct: 488 tgggacaccgctggccaggag 508
>gb|BC108512.1| Xenopus laevis cDNA clone MGC:130912 IMAGE:7392159, complete cds Length = 1215 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccaccataggggtggatttt 227 |||||||||||||||||||| Sbjct: 324 ccaccataggggtggatttt 343
>ref|XM_528339.1| PREDICTED: Pan troglodytes similar to concentrative Na+-nucleoside cotransporter (LOC472969), mRNA Length = 2430 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 ctccaccccaccaacccgcccgcc 29 ||||||||| |||||||||||||| Sbjct: 5 ctccaccccgccaacccgcccgcc 28
>gb|DQ213304.1| Taeniopygia guttata clone 0061P0023G12 Ras-related protein Rab-33A-like mRNA, complete sequence Length = 887 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 gacaccgctggccaggagaggttt 302 ||||| |||||||||||||||||| Sbjct: 386 gacacagctggccaggagaggttt 409
>gb|BC044459.1| Danio rerio RAB2, member RAS oncogene family, mRNA (cDNA clone MGC:55704 IMAGE:3815890), complete cds Length = 2082 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 caatcactagttcttactacagaggtgc 334 ||||||| || ||||||||||||||||| Sbjct: 294 caatcaccaggtcttactacagaggtgc 321
>gb|BC053195.1| Danio rerio RAB13, member RAS oncogene family, mRNA (cDNA clone MGC:64010 IMAGE:6792909), complete cds Length = 1726 Score = 40.1 bits (20), Expect = 7.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 276 tgggacaccgctggccaggagaggtttaggacaatcactagttcttactacagagg 331 |||||||| || || ||||||||||||| ||| ||||| | | | ||||||||||| Sbjct: 578 tgggacacagcaggacaggagaggtttaagaccatcaccactgcatactacagagg 633 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,464,233 Number of Sequences: 3902068 Number of extensions: 5464233 Number of successful extensions: 111693 Number of sequences better than 10.0: 312 Number of HSP's better than 10.0 without gapping: 314 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 109936 Number of HSP's gapped (non-prelim): 1751 length of query: 553 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 530 effective length of database: 17,143,297,704 effective search space: 9085947783120 effective search space used: 9085947783120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)