>FAD3C_SOYBN (P48621) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 453

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 48/111 (43%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
 Frame = +2

Query: 236 RDWALRVSAPTRLASVLEEDKRGLXXXXXXXXXXXXXXXXXXXX---XXXXEIRAAIPKH 406
           R+W L+VSAP R+AS+ EE K                              +IRAAIPKH
Sbjct: 57  RNWGLKVSAPLRVASIEEEQKSVDLTNGTNGVEHEKLPEFDPGAPPPFNLADIRAAIPKH 116

Query: 407 CWVKDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           CWVKDPWRSMSY                        PLYWAAQGTMFWALF
Sbjct: 117 CWVKDPWRSMSYVVRDVIAVFGLAAAAAYLNNWLVWPLYWAAQGTMFWALF 167

>FAD3C_SESIN (P48620) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 447

 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 43/108 (39%), Positives = 49/108 (45%)
 Frame = +2

Query: 236 RDWALRVSAPTRLASVLEEDKRGLXXXXXXXXXXXXXXXXXXXXXXXXEIRAAIPKHCWV 415
           ++WALRVSAP R+  V EE++                           +IR AIPKHCWV
Sbjct: 58  KNWALRVSAPLRVLQVEEEEEN--KEGERVINGGEEFDPGAPPPFKLSDIREAIPKHCWV 115

Query: 416 KDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           KDPWRSM Y                        PLYW AQ TMFWALF
Sbjct: 116 KDPWRSMGYVVRDVAVVFGLAAVAAYFNNWVVWPLYWFAQSTMFWALF 163

>FAD3C_RICCO (P48619) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 460

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 41/111 (36%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
 Frame = +2

Query: 239 DWALRVSAPTRLASVLEEDKRGLXXXXXXXXXXXXXXXXXXXXX----XXXEIRAAIPKH 406
           +WAL V+ P  +++V  ED R                              +IRAAIPKH
Sbjct: 63  NWALNVAVPVNVSTVSGEDDREREEFNGIVNVDEGKGEFFDAGAPPPFTLADIRAAIPKH 122

Query: 407 CWVKDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           CWVK+PWRSMSY                        PLYW  QGTMFWALF
Sbjct: 123 CWVKNPWRSMSYVLRDVVVVFGLAAVAAYFNNWVAWPLYWFCQGTMFWALF 173

>FAD3D_ARATH (P48622) Temperature-sensitive omega-3 fatty acid desaturase,|
           chloroplast precursor (EC 1.14.19.-)
          Length = 435

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 44/109 (40%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = +2

Query: 236 RDWALRVSAP-TRLASVLEEDKRGLXXXXXXXXXXXXXXXXXXXXXXXXEIRAAIPKHCW 412
           R+WAL V+ P T L S  EED                            +IRAAIPKHCW
Sbjct: 57  RNWALNVATPLTTLQSPSEEDTERFDPGAPPPFNLA-------------DIRAAIPKHCW 103

Query: 413 VKDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           VK+PW SMSY                        PLYW AQGTMFWALF
Sbjct: 104 VKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALF 152

>FAD3C_ARATH (P46310) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 446

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 43/112 (38%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
 Frame = +2

Query: 236 RDWALRVSAPTRLA----SVLEEDKRGLXXXXXXXXXXXXXXXXXXXXXXXXEIRAAIPK 403
           R+WAL VS P        S LEED +                          +IRAAIPK
Sbjct: 60  RNWALNVSTPLTTPIFEESPLEEDNK------------QRFDPGAPPPFNLADIRAAIPK 107

Query: 404 HCWVKDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           HCWVK+PW+S+SY                        PLYW AQGTMFWALF
Sbjct: 108 HCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALF 159

>FAD3C_BRANA (P48618) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-) (Fragment)
          Length = 404

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 32/60 (53%), Positives = 35/60 (58%)
 Frame = +2

Query: 380 EIRAAIPKHCWVKDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           +IRAAIPKHCWVK+PW+SMSY                        PLYW AQGTMFWALF
Sbjct: 58  DIRAAIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALF 117

>FAD3E_ARATH (P48623) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 386

 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 31/60 (51%), Positives = 34/60 (56%)
 Frame = +2

Query: 380 EIRAAIPKHCWVKDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           +IRAAIPKHCWVK P RSMSY                        PLYWAAQGT+FWA+F
Sbjct: 38  DIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLYWAAQGTLFWAIF 97

>FAD3E_BRANA (P48624) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 383

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 30/60 (50%), Positives = 33/60 (55%)
 Frame = +2

Query: 380 EIRAAIPKHCWVKDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           +IRAAIPKHCWVK P RSMSY                        PLYW AQGT+FWA+F
Sbjct: 35  DIRAAIPKHCWVKSPLRSMSYVTRDIFAVAALAMAAVYFDSWFLWPLYWVAQGTLFWAIF 94

>FAD3E_TOBAC (P48626) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 379

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 30/60 (50%), Positives = 32/60 (53%)
 Frame = +2

Query: 380 EIRAAIPKHCWVKDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           EIR  IPKHCWVKDP RS+SY                        PLYWA QGTMFWA+F
Sbjct: 34  EIRNVIPKHCWVKDPLRSLSYVVRDVIFVATLIGIAIHLDSWLFYPLYWAIQGTMFWAIF 93

>FAD3E_PHAAU (P32291) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-) (Indole-3-acetic acid-induced protein ARG1)
          Length = 380

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 29/60 (48%), Positives = 31/60 (51%)
 Frame = +2

Query: 380 EIRAAIPKHCWVKDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           +IRAAIPKHCW K   RS+SY                        PLYW AQGTMFWALF
Sbjct: 34  DIRAAIPKHCWEKSTLRSLSYVLRDVLVVTALAASAISFNSWFFWPLYWPAQGTMFWALF 93

>FAD3E_SOYBN (P48625) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 380

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 32/60 (53%)
 Frame = +2

Query: 380 EIRAAIPKHCWVKDPWRSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALF 559
           EIRA+IPKHCWVK+PWRS+SY                         +Y   QGTMFWALF
Sbjct: 37  EIRASIPKHCWVKNPWRSLSYVLRDVLVIAALVAAAIHFDNWLLWLIYCPIQGTMFWALF 96

>HSP71_YEAST (P10591) Heat shock protein SSA1 (Heat shock protein YG100)|
          Length = 641

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +1

Query: 349 PGGAAAVRPGGDPRGHPEALLGQGP 423
           PGGAA   PGG P G P A   +GP
Sbjct: 611 PGGAAGGAPGGFPGGAPPAPEAEGP 635


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,109,944
Number of Sequences: 219361
Number of extensions: 718659
Number of successful extensions: 2982
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2967
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)