ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart19g09 |
|---|---|
| Clone Library Name | barley_pub |
>GI1L3_ARATH (Q940G6) Probable gibberellin receptor GID1L3 (EC 3.-.-.-)| (GID1-like protein 3) Length = 344 Score = 51.6 bits (122), Expect = 1e-06 Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 15/126 (11%) Frame = +2 Query: 74 DFDFSPFLVRYKSGRVHRLMGT---SRVDAGTDAATGVTCKDVVIDADAGLAARLYLPND 244 +F + L+R G +R + +V A + GV DV+ID L +R+Y P D Sbjct: 26 NFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPAD 85 Query: 245 VPRSKKL------------PVLVYFHGGAFAVHSAFSVTHHRFLNALXXXXXXXXXXXDY 388 S + PV+V+FHGG+FA SA S + L +Y Sbjct: 86 AGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNY 145 Query: 389 RLAPEH 406 R APE+ Sbjct: 146 RRAPEN 151
>GID1_ORYSA (Q6L545) Gibberellin receptor GID1 (EC 3.-.-.-)| (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) Length = 354 Score = 49.7 bits (117), Expect = 4e-06 Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 24/135 (17%) Frame = +2 Query: 74 DFDFSPFLVRYKSGRVHRLMGT---SRVDAGTDAATGVTCKDVVIDADAGLAARLYLP-- 238 +F S ++R G R +G RV A GV+ D +ID GL R+Y Sbjct: 26 NFKLSYNILRRADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAA 85 Query: 239 -------------------NDVPRSKKLPVLVYFHGGAFAVHSAFSVTHHRFLNALXXXX 361 D P ++ PV+++FHGG+F SA S + Sbjct: 86 EGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLS 145 Query: 362 XXXXXXXDYRLAPEH 406 +YR APEH Sbjct: 146 KGVVVSVNYRRAPEH 160
>GI1L1_ARATH (Q9MAA7) Probable gibberellin receptor GID1L1 (EC 3.-.-.-)| (GID1-like protein 1) Length = 345 Score = 42.4 bits (98), Expect = 7e-04 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 14/102 (13%) Frame = +2 Query: 143 RVDAGTDAATGVTCKDVVIDADAGLAARLYLPNDVPRSKK--------------LPVLVY 280 +V A + GV DV+ID L +R+Y P + + +PV+++ Sbjct: 52 KVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILF 111 Query: 281 FHGGAFAVHSAFSVTHHRFLNALXXXXXXXXXXXDYRLAPEH 406 FHGG+FA SA S + L +YR APE+ Sbjct: 112 FHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPEN 153
>GI1L2_ARATH (Q9LYC1) Probable gibberellin receptor GID1L2 (EC 3.-.-.-)| (GID1-like protein 2) Length = 358 Score = 42.4 bits (98), Expect = 7e-04 Identities = 36/131 (27%), Positives = 50/131 (38%), Gaps = 15/131 (11%) Frame = +2 Query: 59 PDTEVDFDFSPFLVRYKSGRVHRLMGTSRVDAGTDAATGVTCKDVVIDADAGLAARLYLP 238 PD + D + FL R +V A + GV D V D+ L R+Y P Sbjct: 37 PDGSFNRDLAEFLDR-------------KVPANSFPLDGVFSFDHV-DSTTNLLTRIYQP 82 Query: 239 NDVPRSKK---------------LPVLVYFHGGAFAVHSAFSVTHHRFLNALXXXXXXXX 373 + + +PVL++FHGG+F SA S + F L Sbjct: 83 ASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVV 142 Query: 374 XXXDYRLAPEH 406 DYR +PEH Sbjct: 143 VSVDYRRSPEH 153
>LIP2_MORS1 (P24484) Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 433 Score = 39.3 bits (90), Expect = 0.006 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 5/91 (5%) Frame = +2 Query: 149 DAGTDAATGVTCKDVVI-DADAG-LAARLY---LPNDVPRSKKLPVLVYFHGGAFAVHSA 313 DA V+ +D I +AD G + R Y N +S +++FHGG F + Sbjct: 115 DASGSTENAVSWQDKTIANADGGDMTVRCYQKSTQNSERKSTDEAAMLFFHGGGFCIGDI 174 Query: 314 FSVTHHRFLNALXXXXXXXXXXXDYRLAPEH 406 THH F + + DYR+APE+ Sbjct: 175 D--THHEFCHTVCAQTGWAVVSVDYRMAPEY 203
>LIPS_HUMAN (Q05469) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 1076 Score = 35.8 bits (81), Expect = 0.063 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = +2 Query: 236 PNDVPRSKKLPVLVYFHGGAFAVHSAFSVTHHRFLNALXXXXXXXXXXXDYRLAPE 403 P PRS+ L +V+FHGG F + S +H +L + DY LAPE Sbjct: 637 PQQAPRSRSL--IVHFHGGGFVAQT--SRSHEPYLKSWAQELGAPIISIDYSLAPE 688
>CES3_MOUSE (Q8VCT4) Carboxylesterase 3 precursor (EC 3.1.1.1) (Triacylglycerol| hydrolase) (TGH) Length = 565 Score = 33.1 bits (74), Expect = 0.41 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 L +Y P D+ ++ +LPV+V+ HGG V A Sbjct: 117 LYLNIYTPADLTKNSRLPVMVWIHGGGLVVGGA 149
>EST1_MACFA (O46421) Liver carboxylesterase 1 precursor (EC 3.1.1.1)| Length = 566 Score = 33.1 bits (74), Expect = 0.41 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 L +Y P D+ + +LPV+V+ HGG V +A Sbjct: 117 LYLNIYTPADLTKKNRLPVMVWIHGGGLVVGAA 149
>EST1_MOUSE (Q8VCC2) Liver carboxylesterase 1 precursor (EC 3.1.1.1) (Acyl| coenzyme A:cholesterol acyltransferase) (ES-x) Length = 565 Score = 32.7 bits (73), Expect = 0.53 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 L +Y P D+ ++ +LPV+V+ HGG + A Sbjct: 117 LYLNIYTPADLTQNSRLPVMVWIHGGGLVIDGA 149
>CES3_RAT (P16303) Carboxylesterase 3 precursor (EC 3.1.1.1) (Liver| carboxylesterase 10) (Carboxyesterase ES-10) (pI 6.1 esterase) (ES-HVEL) Length = 565 Score = 32.7 bits (73), Expect = 0.53 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 L +Y P D+ ++ +LPV+V+ HGG V A Sbjct: 117 LYLNVYTPADLTKNSRLPVMVWIHGGGLVVGGA 149
>EST22_MOUSE (Q64176) Liver carboxylesterase 22 precursor (EC 3.1.1.1) (Egasyn)| (Esterase-22) (Es-22) Length = 562 Score = 32.7 bits (73), Expect = 0.53 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 L +Y P D+ +S +LPV+V+ HGG + A Sbjct: 118 LYLNIYTPADLTKSDRLPVMVWIHGGGLVLGGA 150
>EST1_HUMAN (P23141) Liver carboxylesterase 1 precursor (EC 3.1.1.1) (Acyl| coenzyme A:cholesterol acyltransferase) (ACAT) (Monocyte/macrophage serine esterase) (HMSE) (Serine esterase 1) (Brain carboxylesterase hBr1) (Triacylglycerol hydrolase) (TGH) (Ega Length = 567 Score = 32.7 bits (73), Expect = 0.53 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 L +Y P D+ + +LPV+V+ HGG V +A Sbjct: 117 LYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAA 149
>ESTN_MOUSE (P23953) Liver carboxylesterase N precursor (EC 3.1.1.1) (PES-N)| (Lung surfactant convertase) Length = 554 Score = 32.3 bits (72), Expect = 0.70 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAV 304 L +Y P D+ +S +LPV+V+ HGG + Sbjct: 117 LYLNIYSPADLTKSSQLPVMVWIHGGGLVI 146
>EST1_RAT (P10959) Liver carboxylesterase 1 precursor (EC 3.1.1.1)| (Carboxyesterase ES-1) (E1) (ES-THET) (Esterase-2) Length = 549 Score = 32.0 bits (71), Expect = 0.91 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 L +Y P D+ ++ +LPV+V+ HGG + A Sbjct: 117 LYLNIYSPADLTKNSRLPVMVWIHGGGLIIGGA 149
>LIPS_SPETR (Q9R101) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 763 Score = 31.6 bits (70), Expect = 1.2 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +2 Query: 236 PNDVPRSKKLPVLVYFHGGAFAVHSAFSVTHHRFLNALXXXXXXXXXXXDYRLAPE 403 P RS+ L +V FHGG F + S +H +L + DY LAPE Sbjct: 336 PQQTSRSRSL--VVXFHGGGFVAQT--SKSHEPYLKSWAQELGAPIISIDYSLAPE 387
>EST4_RAT (Q64573) Liver carboxylesterase 4 precursor (EC 3.1.1.1)| (Carboxyesterase ES-4) (Microsomal palmitoyl-CoA hydrolase) (Kidney microsomal carboxylesterase) Length = 561 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 9/60 (15%) Frame = +2 Query: 161 DAATGVTCKDVVID---------ADAGLAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 DAA G D++ + ++ L +Y P D ++ +LPV+V+ HGG + A Sbjct: 90 DAAKGQRMNDLLTNRKEKIHLEFSEDCLYLNIYTPADFTKNSRLPVMVWIHGGGMTLGGA 149
>EST31_MOUSE (Q63880) Liver carboxylesterase 31 precursor (EC 3.1.1.1) (ES-Male)| (Esterase-31) Length = 554 Score = 31.6 bits (70), Expect = 1.2 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSAFS 319 L +Y P ++ K PV+V+ HGG+ V S+ S Sbjct: 111 LTLNIYSPTEITAGDKRPVMVWIHGGSLRVGSSTS 145
>EST1_RABIT (P12337) Liver carboxylesterase 1 precursor (EC 3.1.1.1) (Acyl| coenzyme A:cholesterol acyltransferase) Length = 565 Score = 31.2 bits (69), Expect = 1.6 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 L +Y P D+ + +LPV+V+ HGG V A Sbjct: 117 LYLNIYTPADLTKRGRLPVMVWIHGGGLMVGGA 149
>D2_DICDI (P18142) cAMP-regulated D2 protein precursor| Length = 535 Score = 31.2 bits (69), Expect = 1.6 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 227 LYLPNDVPRSKKLPVLVYFHGGAFAVHS 310 ++ P D + K PV+VY GGAF+V S Sbjct: 114 VFTPKDATPNSKYPVIVYIPGGAFSVGS 141
>CCD96_MACFA (Q95LS7) Coiled-coil domain-containing protein 96| Length = 560 Score = 30.8 bits (68), Expect = 2.0 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = -3 Query: 340 EEAVVRDG---EGRVDGEGAPVEVDEDGELLGPRDVIWEVE 227 EE RDG EGR GEG P + E+G+ LG RD ++E Sbjct: 177 EEETRRDGAESEGRA-GEGRPAKSQEEGKPLGGRDEFEDLE 216
>EST3_RAT (Q63108) Liver carboxylesterase 3 precursor (EC 3.1.1.1)| (Carboxyesterase ES-3) (pI 5.5 esterase) (ES-HTEL) Length = 561 Score = 30.8 bits (68), Expect = 2.0 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 L +Y P D+ + +LPV+V+ HGG + A Sbjct: 117 LYLNIYTPADLTKRDRLPVMVWIHGGGLVLGGA 149
>EST1_PIG (Q29550) Liver carboxylesterase precursor (EC 3.1.1.1)| (Proline-beta-naphthylamidase) Length = 566 Score = 30.4 bits (67), Expect = 2.7 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGGAFAVHSA 313 L +Y P D+ + +LPV+V+ HGG + A Sbjct: 118 LYLNIYTPADLTKRGRLPVMVWIHGGGLVLGGA 150
>RS9_PYRFU (Q8U0E7) 30S ribosomal protein S9P| Length = 135 Score = 29.6 bits (65), Expect = 4.5 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 Query: 361 GRCHEGVEEAVVRDGEGRVDGEGAPVEVDE 272 G+ + AV+R+G+GRV G PVE+ E Sbjct: 8 GKRKTAIARAVIREGKGRVRINGKPVEIIE 37
>EST_ACILW (P18773) Esterase (EC 3.1.1.-)| Length = 303 Score = 29.6 bits (65), Expect = 4.5 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +2 Query: 269 VLVYFHGGAFAVHSAFSVTHHRFLNALXXXXXXXXXXXDYRLAPEH 406 ++ + HGGAF + S TH + L DY LAPEH Sbjct: 74 LIFHIHGGAFFLGSLN--THRALMTDLASRTQMQVIHVDYPLAPEH 117
>TOP2_CAEEL (Q23670) Probable DNA topoisomerase 2 (EC 5.99.1.3) (DNA| topoisomerase II) Length = 1520 Score = 29.6 bits (65), Expect = 4.5 Identities = 20/60 (33%), Positives = 32/60 (53%) Frame = +2 Query: 32 GRRATAAMDPDTEVDFDFSPFLVRYKSGRVHRLMGTSRVDAGTDAATGVTCKDVVIDADA 211 G++A + D D E F +P R KSGR + T VD+G+D+ + V+D+D+ Sbjct: 1464 GKKAAGSDDEDDE-SFVVAP---REKSGRARKAPPTYDVDSGSDSDQPKKKRGRVVDSDS 1519
>RS9_PYRHO (O59299) 30S ribosomal protein S9P| Length = 135 Score = 29.3 bits (64), Expect = 5.9 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 361 GRCHEGVEEAVVRDGEGRVDGEGAPVEVDE 272 G+ + AV+R+G GRV G PVE+ E Sbjct: 8 GKRKTAIARAVIREGRGRVRINGKPVEIIE 37
>PNBA_BACSU (P37967) Para-nitrobenzyl esterase (EC 3.1.1.-) (PNB| carboxy-esterase) (Intracellular esterase B) (PNBCE) Length = 489 Score = 28.9 bits (63), Expect = 7.7 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2 Query: 242 DVPRSKKLPVLVYFHGGAF 298 D P SK LPV+V+ HGGAF Sbjct: 91 DTP-SKNLPVMVWIHGGAF 108
>AES_ECOLI (P23872) Acetyl esterase (EC 3.1.1.-)| Length = 319 Score = 28.9 bits (63), Expect = 7.7 Identities = 16/52 (30%), Positives = 21/52 (40%) Frame = +2 Query: 248 PRSKKLPVLVYFHGGAFAVHSAFSVTHHRFLNALXXXXXXXXXXXDYRLAPE 403 P+ L Y HGG F + + TH R + L DY L+PE Sbjct: 79 PQPDSPATLFYLHGGGFILGNLD--THDRIMRLLASYSQCTVIGIDYTLSPE 128
>RS9_PYRAB (Q9V195) 30S ribosomal protein S9P| Length = 135 Score = 28.9 bits (63), Expect = 7.7 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 Query: 361 GRCHEGVEEAVVRDGEGRVDGEGAPVEVDE 272 G+ + AV+R+G+GRV G PVE+ E Sbjct: 8 GKRKTAIARAVIREGKGRVRINGKPVELVE 37
>EST5_RAT (Q63010) Liver carboxylesterase B-1 precursor (EC 3.1.1.1) (Liver| microsomal carboxylesterase) Length = 561 Score = 28.9 bits (63), Expect = 7.7 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +2 Query: 215 LAARLYLPNDVPRSKKLPVLVYFHGG 292 L +Y P D + ++PV+V+ HGG Sbjct: 117 LYLNIYTPADFTKDSRMPVMVWIHGG 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,019,707 Number of Sequences: 219361 Number of extensions: 608748 Number of successful extensions: 2466 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2369 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2462 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
