ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart19g04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 178 bits (90), Expect = 1e-41 Identities = 111/118 (94%) Strand = Plus / Minus Query: 94 cgcggaggctatggcacgtggtgcgcgccgtgctgttcatgctccgcaagggcatgtcca 153 ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 20743347 cgcggcggctgtggcacgtggtgcgcgccgtgctgttcatgctgcgcaagggcatgtcca 20743288 Query: 154 agcggaagctgtccatggatctccagctcctcctccaccgcggcaagatcgccggcaa 211 |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 20743287 agcggaagctcgccatggacctccacctcctcctccaccgcggcaagatcgccggcaa 20743230 Score = 135 bits (68), Expect = 2e-28 Identities = 123/140 (87%), Gaps = 6/140 (4%) Strand = Plus / Minus Query: 304 gccgcgccctcgaccccgcgctcgcc---tacgacacgcgcggcgccggccgcgaggtgg 360 ||||||| |||||||| ||||||||| |||||| ||||||||||||||| ||||||| Sbjct: 20743107 gccgcgcgctcgacccggcgctcgccgtctacgacccgcgcggcgccggcctggaggtgg 20743048 Query: 361 agttcagctgcagcaacaccccgtcctacc---catccatccaactcatccccaccaagc 417 |||||||||||||||||||||| ||||||| | || |||| |||||||||||||||| Sbjct: 20743047 agttcagctgcagcaacaccccctcctacccgtcgtcgttccatctcatccccaccaagc 20742988 Query: 418 gtcgccgccgcaacaacaac 437 | |||||||||||||||||| Sbjct: 20742987 gccgccgccgcaacaacaac 20742968 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 450 cgcggcgccaacggcgcggagccaggatggtacaactacgacgcggccgacattgccaag 509 |||||||| ||||||| ||||| || |||||||||||||||||||| ||||| ||| Sbjct: 20742934 cgcggcgcgaacggcggcgagcccgggtggtacaactacgacgcggcggacatcgcccgc 20742875 Query: 510 gtcttcgaggtcctcaac 527 ||||||||| |||||||| Sbjct: 20742874 gtcttcgagatcctcaac 20742857 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 441 cgcacgcaccgcggcgccaacggcg 465 |||||||||||||||||| |||||| Sbjct: 25204202 cgcacgcaccgcggcgccgacggcg 25204226 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 ggcgacggcggtgcggcggc 574 |||||||||||||||||||| Sbjct: 14473142 ggcgacggcggtgcggcggc 14473161
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 178 bits (90), Expect = 1e-41 Identities = 111/118 (94%) Strand = Plus / Minus Query: 94 cgcggaggctatggcacgtggtgcgcgccgtgctgttcatgctccgcaagggcatgtcca 153 ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 165754 cgcggcggctgtggcacgtggtgcgcgccgtgctgttcatgctgcgcaagggcatgtcca 165695 Query: 154 agcggaagctgtccatggatctccagctcctcctccaccgcggcaagatcgccggcaa 211 |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 165694 agcggaagctcgccatggacctccacctcctcctccaccgcggcaagatcgccggcaa 165637 Score = 135 bits (68), Expect = 2e-28 Identities = 123/140 (87%), Gaps = 6/140 (4%) Strand = Plus / Minus Query: 304 gccgcgccctcgaccccgcgctcgcc---tacgacacgcgcggcgccggccgcgaggtgg 360 ||||||| |||||||| ||||||||| |||||| ||||||||||||||| ||||||| Sbjct: 165514 gccgcgcgctcgacccggcgctcgccgtctacgacccgcgcggcgccggcctggaggtgg 165455 Query: 361 agttcagctgcagcaacaccccgtcctacc---catccatccaactcatccccaccaagc 417 |||||||||||||||||||||| ||||||| | || |||| |||||||||||||||| Sbjct: 165454 agttcagctgcagcaacaccccctcctacccgtcgtcgttccatctcatccccaccaagc 165395 Query: 418 gtcgccgccgcaacaacaac 437 | |||||||||||||||||| Sbjct: 165394 gccgccgccgcaacaacaac 165375 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 450 cgcggcgccaacggcgcggagccaggatggtacaactacgacgcggccgacattgccaag 509 |||||||| ||||||| ||||| || |||||||||||||||||||| ||||| ||| Sbjct: 165341 cgcggcgcgaacggcggcgagcccgggtggtacaactacgacgcggcggacatcgcccgc 165282 Query: 510 gtcttcgaggtcctcaac 527 ||||||||| |||||||| Sbjct: 165281 gtcttcgagatcctcaac 165264
>ref|XM_464776.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 166 ccatggatctccagctcctcctccaccgcggcaagatcgccggcaaggc 214 ||||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 131 ccatggacctccacctcctcctccgccgcggcaagatcgccggcaaggc 179 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 349 gccgcgaggtggagttcagctgcagcaacac 379 |||||||||| |||||||||||||||||||| Sbjct: 326 gccgcgaggtcgagttcagctgcagcaacac 356 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 94 cgcggaggctatggcacgtggtgcgcgccgtgctgttcatgct 136 ||||| |||| |||| |||||||||||||||||||| |||||| Sbjct: 50 cgcggcggctgtggcgcgtggtgcgcgccgtgctgtacatgct 92 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 292 cgtcgctgtcgcgccgcgccctcgaccccgcgctcgc 328 ||||||||||| |||||| | ||||||| |||||||| Sbjct: 263 cgtcgctgtcgtgccgcggcatcgacccggcgctcgc 299
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 166 ccatggatctccagctcctcctccaccgcggcaagatcgccggcaaggc 214 ||||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 7299815 ccatggacctccacctcctcctccgccgcggcaagatcgccggcaaggc 7299863 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 349 gccgcgaggtggagttcagctgcagcaacac 379 |||||||||| |||||||||||||||||||| Sbjct: 7300010 gccgcgaggtcgagttcagctgcagcaacac 7300040 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 94 cgcggaggctatggcacgtggtgcgcgccgtgctgttcatgct 136 ||||| |||| |||| |||||||||||||||||||| |||||| Sbjct: 7299734 cgcggcggctgtggcgcgtggtgcgcgccgtgctgtacatgct 7299776 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 cgatggagccgagcatggcgcc 94 |||||||||||||||||||||| Sbjct: 10853727 cgatggagccgagcatggcgcc 10853706 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 292 cgtcgctgtcgcgccgcgccctcgaccccgcgctcgc 328 ||||||||||| |||||| | ||||||| |||||||| Sbjct: 7299947 cgtcgctgtcgtgccgcggcatcgacccggcgctcgc 7299983 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 cggcggtgcggcggccctcg 579 |||||||||||||||||||| Sbjct: 28169319 cggcggtgcggcggccctcg 28169300 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gaggtcgtcggcgacggcgg 565 |||||||||||||||||||| Sbjct: 27758389 gaggtcgtcggcgacggcgg 27758370 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gcgccgcgccctcgaccccgcgctcgcc 329 ||||||||| ||||| |||||||||||| Sbjct: 27666405 gcgccgcgcactcgaacccgcgctcgcc 27666432
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 166 ccatggatctccagctcctcctccaccgcggcaagatcgccggcaaggc 214 ||||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 75623 ccatggacctccacctcctcctccgccgcggcaagatcgccggcaaggc 75671 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 349 gccgcgaggtggagttcagctgcagcaacac 379 |||||||||| |||||||||||||||||||| Sbjct: 75818 gccgcgaggtcgagttcagctgcagcaacac 75848 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 94 cgcggaggctatggcacgtggtgcgcgccgtgctgttcatgct 136 ||||| |||| |||| |||||||||||||||||||| |||||| Sbjct: 75542 cgcggcggctgtggcgcgtggtgcgcgccgtgctgtacatgct 75584 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 292 cgtcgctgtcgcgccgcgccctcgaccccgcgctcgc 328 ||||||||||| |||||| | ||||||| |||||||| Sbjct: 75755 cgtcgctgtcgtgccgcggcatcgacccggcgctcgc 75791
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 50.1 bits (25), Expect = 0.008 Identities = 85/103 (82%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 338 gcgcggcgccggccgcgaggtggagttcagctgcagcaacaccccgtcctacccatccat 397 |||||| |||| |||||||||||||||||| | ||||| ||||| ||||||| | | Sbjct: 131857 gcgcggtgccgaccgcgaggtggagttcagttacagca--accccttcctacc--ttgtt 131802 Query: 398 ccaactcatccccaccaagcgtcgccgccgcaacaacaaccgc 440 ||| ||||||| |||||||| |||| || ||||||||||||| Sbjct: 131801 ccatctcatcctaaccaagcgccgccaccacaacaacaaccgc 131759
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24, complete sequence Length = 148784 Score = 50.1 bits (25), Expect = 0.008 Identities = 85/103 (82%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 338 gcgcggcgccggccgcgaggtggagttcagctgcagcaacaccccgtcctacccatccat 397 |||||| |||| |||||||||||||||||| | ||||| ||||| ||||||| | | Sbjct: 81469 gcgcggtgccgaccgcgaggtggagttcagttacagca--accccttcctacc--ttgtt 81414 Query: 398 ccaactcatccccaccaagcgtcgccgccgcaacaacaaccgc 440 ||| ||||||| |||||||| |||| || ||||||||||||| Sbjct: 81413 ccatctcatcctaaccaagcgccgccaccacaacaacaaccgc 81371
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.008 Identities = 85/103 (82%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 338 gcgcggcgccggccgcgaggtggagttcagctgcagcaacaccccgtcctacccatccat 397 |||||| |||| |||||||||||||||||| | ||||| ||||| ||||||| | | Sbjct: 20243197 gcgcggtgccgaccgcgaggtggagttcagttacagca--accccttcctacc--ttgtt 20243142 Query: 398 ccaactcatccccaccaagcgtcgccgccgcaacaacaaccgc 440 ||| ||||||| |||||||| |||| || ||||||||||||| Sbjct: 20243141 ccatctcatcctaaccaagcgccgccaccacaacaacaaccgc 20243099 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 181 tcctcctccaccgcggcaagatcgccggcaaggc 214 |||||||| |||||||||| ||||||||||||| Sbjct: 6211243 tcctcctcggccgcggcaagctcgccggcaaggc 6211210 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 gcggaggcgccgccgccgacgtcg 296 |||||||||||||||||| ||||| Sbjct: 26170667 gcggaggcgccgccgccgccgtcg 26170644 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 gcctacgacacgcgcggcgccggc 350 ||||||||| |||||||||||||| Sbjct: 22653468 gcctacgacgcgcgcggcgccggc 22653491 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 354 gaggtggagttcagctgcagcaacaccccgtc 385 ||||||||||||||||||| || ||| ||||| Sbjct: 6211100 gaggtggagttcagctgcaccaccacgccgtc 6211069
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 275 ggaggcgccgccgccgacgtcgctgtcgc 303 |||||||||||||| |||||||||||||| Sbjct: 4236346 ggaggcgccgccgctgacgtcgctgtcgc 4236318 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 560 cggcggtgcggcggccctcgc 580 ||||||||||||||||||||| Sbjct: 8229085 cggcggtgcggcggccctcgc 8229065 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gccgccgccgacgtcgctgt 300 |||||||||||||||||||| Sbjct: 167723 gccgccgccgacgtcgctgt 167704
>dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47L09, TM0218, complete sequence Length = 113213 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 419 tcgccgccgcaacaacaaccgccgc 443 ||||||||||||||||||||||||| Sbjct: 94466 tcgccgccgcaacaacaaccgccgc 94490
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 cggcaagatcgccggcaaggccct 217 |||||||||||||||||||||||| Sbjct: 5834310 cggcaagatcgccggcaaggccct 5834333
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 gcgccgcgccctcgaccccgcgc 324 ||||||||||||||||||||||| Sbjct: 15455 gcgccgcgccctcgaccccgcgc 15477
>gb|L36679.1|AMLUNA Amycolatopsis methanolica plasmid pMEA300 stf gene, complete cds Length = 13285 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 545 cgaggtcgtcggcgacggcggtgcggc 571 ||||||||||||||| ||||||||||| Sbjct: 823 cgaggtcgtcggcgaaggcggtgcggc 849
>ref|XM_476112.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 181 tcctcctccaccgcggcaagatcgccggcaaggc 214 |||||||| |||||||||| ||||||||||||| Sbjct: 137 tcctcctcggccgcggcaagctcgccggcaaggc 170 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 354 gaggtggagttcagctgcagcaacaccccgtc 385 ||||||||||||||||||| || ||| ||||| Sbjct: 280 gaggtggagttcagctgcaccaccacgccgtc 311
>ref|XM_465000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 cgatggagccgagcatggcgcc 94 |||||||||||||||||||||| Sbjct: 277 cgatggagccgagcatggcgcc 256
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 276 gaggcgccgccgccgacgtcgc 297 |||||||||||||||||||||| Sbjct: 626273 gaggcgccgccgccgacgtcgc 626252
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 181 tcctcctccaccgcggcaagatcgccggcaaggc 214 |||||||| |||||||||| ||||||||||||| Sbjct: 41598 tcctcctcggccgcggcaagctcgccggcaaggc 41565 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 354 gaggtggagttcagctgcagcaacaccccgtc 385 ||||||||||||||||||| || ||| ||||| Sbjct: 41455 gaggtggagttcagctgcaccaccacgccgtc 41424
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 gcggaggcgccgccgccgacgt 294 |||||||||||||||||||||| Sbjct: 93348 gcggaggcgccgccgccgacgt 93327
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 cgatggagccgagcatggcgcc 94 |||||||||||||||||||||| Sbjct: 59926 cgatggagccgagcatggcgcc 59905
>dbj|AK110599.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-G03, full insert sequence Length = 853 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 181 tcctcctccaccgcggcaagatcgccggcaaggc 214 |||||||| |||||||||| ||||||||||||| Sbjct: 314 tcctcctcggccgcggcaagctcgccggcaaggc 281 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 354 gaggtggagttcagctgcagcaacaccccgtc 385 ||||||||||||||||||| || ||| ||||| Sbjct: 171 gaggtggagttcagctgcaccaccacgccgtc 140
>dbj|AK110596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-F12, full insert sequence Length = 1272 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 181 tcctcctccaccgcggcaagatcgccggcaaggc 214 |||||||| |||||||||| ||||||||||||| Sbjct: 321 tcctcctcggccgcggcaagctcgccggcaaggc 354 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 354 gaggtggagttcagctgcagcaacaccccgtc 385 ||||||||||||||||||| || ||| ||||| Sbjct: 464 gaggtggagttcagctgcaccaccacgccgtc 495
>gb|AF099810.1|AF099810 Homo sapiens neurexin III-alpha gene, partial cds Length = 193824 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 tctctctcactcctcagtcctc 61 |||||||||||||||||||||| Sbjct: 27138 tctctctcactcctcagtcctc 27117
>ref|NM_188264.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 714 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 357 gtggagttcagctgcagcaacaccccgtcctac 389 |||||||||||||||| || ||| ||||||||| Sbjct: 283 gtggagttcagctgcaccaccacgccgtcctac 315
>ref|XM_469049.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1173 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 cggcgacggcggtgcggcggc 574 ||||||||||||||||||||| Sbjct: 165 cggcgacggcggtgcggcggc 145
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 cggcgacggcggtgcggcggc 574 ||||||||||||||||||||| Sbjct: 46713 cggcgacggcggtgcggcggc 46733
>gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, complete sequence Length = 194548 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 acccatccatccaactcatcc 408 ||||||||||||||||||||| Sbjct: 154654 acccatccatccaactcatcc 154674
>gb|AY568293.1| Crithidia fasciculata paraflagellar rod protein (PFR2) mRNA, complete cds Length = 2632 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 1728 atctccagctcctcctccacc 1708
>gb|AC158214.4| Mus musculus chromosome 7, clone RP24-208N15, complete sequence Length = 175320 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tcctacccatccatccaactc 404 ||||||||||||||||||||| Sbjct: 137263 tcctacccatccatccaactc 137283
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 cggcgacggcggtgcggcggc 574 ||||||||||||||||||||| Sbjct: 25150737 cggcgacggcggtgcggcggc 25150757 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 cggcgacggcggtgcggcgg 573 |||||||||||||||||||| Sbjct: 13997291 cggcgacggcggtgcggcgg 13997310 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gccgccgccgacgtcgctgt 300 |||||||||||||||||||| Sbjct: 9191251 gccgccgccgacgtcgctgt 9191270
>ref|XM_809076.1| Trypanosoma cruzi strain CL Brener 69 kDa paraflagellar rod protein (Tc00.1047053511215.119) partial mRNA Length = 1803 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 1538 atctccagctcctcctccacc 1518
>ref|XM_797553.1| Trypanosoma cruzi strain CL Brener paraxonemal rod protein PAR2 (Tc00.1047053434931.10) partial mRNA Length = 795 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 530 atctccagctcctcctccacc 510
>ref|XM_802852.1| Trypanosoma cruzi strain CL Brener 69 kDa paraflagellar rod protein (Tc00.1047053508961.79) partial mRNA Length = 1080 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 815 atctccagctcctcctccacc 795
>gb|AC163993.3| Mus musculus chromosome 19, clone RP24-78O14, complete sequence Length = 177411 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 acccatccatccaactcatcc 408 ||||||||||||||||||||| Sbjct: 49549 acccatccatccaactcatcc 49529
>gb|AY225601.1|AY225601S1 Streptomyces vinaceus strain ATCC 11861 viomycin biosynthesis gene cluster, 5' fragment Length = 3272 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 ccgcgccctcgaccccgcgct 325 ||||||||||||||||||||| Sbjct: 1994 ccgcgccctcgaccccgcgct 2014
>gb|AY263398.1| Streptomyces vinaceus strain ATCC 11861 viomycin biosynthetic gene cluster, complete sequence Length = 36401 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 ccgcgccctcgaccccgcgct 325 ||||||||||||||||||||| Sbjct: 9225 ccgcgccctcgaccccgcgct 9245
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 cggcgacggcggtgcggcggc 574 ||||||||||||||||||||| Sbjct: 11755 cggcgacggcggtgcggcggc 11735
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 cgccgccgcaacaacaaccgccgca 444 ||||||||||||| ||||||||||| Sbjct: 211967 cgccgccgcaacagcaaccgccgca 211943
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 560 cggcggtgcggcggccctcgc 580 ||||||||||||||||||||| Sbjct: 4748126 cggcggtgcggcggccctcgc 4748146
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 cggcgacggcggtgcggcggc 574 ||||||||||||||||||||| Sbjct: 25130088 cggcgacggcggtgcggcggc 25130068 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 cgaggtcgtcggcgacggcg 564 |||||||||||||||||||| Sbjct: 23403746 cgaggtcgtcggcgacggcg 23403727 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 cgtcgctgtcgcgccgcgccctcg 315 ||||||||||||||||||| |||| Sbjct: 12411178 cgtcgctgtcgcgccgcgcgctcg 12411155
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 cggcgacggcggtgcggcggc 574 ||||||||||||||||||||| Sbjct: 25242046 cggcgacggcggtgcggcggc 25242066 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 cggcgacggcggtgcggcgg 573 |||||||||||||||||||| Sbjct: 13992266 cggcgacggcggtgcggcgg 13992285 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gccgccgccgacgtcgctgt 300 |||||||||||||||||||| Sbjct: 9189084 gccgccgccgacgtcgctgt 9189103
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 357 gtggagttcagctgcagcaacaccccgtcctac 389 |||||||||||||||| || ||| ||||||||| Sbjct: 5352131 gtggagttcagctgcaccaccacgccgtcctac 5352099 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gaggtcgtcggcgacggcgg 565 |||||||||||||||||||| Sbjct: 29816647 gaggtcgtcggcgacggcgg 29816666 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggaggcgccgccgccgac 292 |||||||||||||||||||| Sbjct: 12744388 gcggaggcgccgccgccgac 12744369
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 357 gtggagttcagctgcagcaacaccccgtcctac 389 |||||||||||||||| || ||| ||||||||| Sbjct: 103475 gtggagttcagctgcaccaccacgccgtcctac 103443
>gb|AC131983.11| Mus musculus chromosome 7, clone RP24-173C11, complete sequence Length = 158500 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tcctacccatccatccaactc 404 ||||||||||||||||||||| Sbjct: 25519 tcctacccatccatccaactc 25539
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 357 gtggagttcagctgcagcaacaccccgtcctac 389 |||||||||||||||| || ||| ||||||||| Sbjct: 147382 gtggagttcagctgcaccaccacgccgtcctac 147350
>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502B12 Length = 197160 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 cggcgacggcggtgcggcggc 574 ||||||||||||||||||||| Sbjct: 32285 cggcgacggcggtgcggcggc 32305
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 441 cgcacgcaccgcggcgccaacggcg 465 |||||||||||||||||| |||||| Sbjct: 22810 cgcacgcaccgcggcgccgacggcg 22834
>dbj|AK108464.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-D11, full insert sequence Length = 1103 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 357 gtggagttcagctgcagcaacaccccgtcctac 389 |||||||||||||||| || ||| ||||||||| Sbjct: 477 gtggagttcagctgcaccaccacgccgtcctac 509
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 cggcgacggcggtgcggcggc 574 ||||||||||||||||||||| Sbjct: 107399 cggcgacggcggtgcggcggc 107419
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 agcggaggcgccgccgccgac 292 ||||||||||||||||||||| Sbjct: 1991184 agcggaggcgccgccgccgac 1991164
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 cggcgacggcggtgcggcggc 574 ||||||||||||||||||||| Sbjct: 77515 cggcgacggcggtgcggcggc 77495
>gb|U45884.1|LMU45884 Leishmania mexicana mexicana paraflagellar rod protein (PFR-2C) gene, complete cds Length = 5468 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 3129 atctccagctcctcctccacc 3109
>gb|M97548.1|TRBPAR2A Trypanosoma cruzi major paraflagellar rod protein (PAR2) mRNA, complete cds Length = 2057 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 1586 atctccagctcctcctccacc 1566
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gaggtcgtcggcgacggcgg 565 |||||||||||||||||||| Sbjct: 95721 gaggtcgtcggcgacggcgg 95740
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 cgcgctcgcctacgacacgcgcgg 343 |||||||||||||||| ||||||| Sbjct: 907410 cgcgctcgcctacgacgcgcgcgg 907433
>ref|XM_475744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 525 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 gcggaggcgccgccgccgacgtcg 296 |||||||||||||||||| ||||| Sbjct: 104 gcggaggcgccgccgccgccgtcg 81
>ref|XM_471569.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 603 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 cgtcgctgtcgcgccgcgccctcg 315 ||||||||||||||||||| |||| Sbjct: 157 cgtcgctgtcgcgccgcgcgctcg 134
>ref|XM_517650.1| PREDICTED: Pan troglodytes similar to KIAA0372 (LOC461746), mRNA Length = 6035 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 410 agttcagctgcagcaacacc 391
>ref|NM_196326.1| Oryza sativa (japonica cultivar-group) putative stress enhanced protein (OSJNBa0011L09.1), mRNA Length = 446 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 agccgagcatggcgccgcgg 98 |||||||||||||||||||| Sbjct: 291 agccgagcatggcgccgcgg 272
>ref|NM_183864.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 930 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcggaggcgccgccgccgac 292 |||||||||||||||||||| Sbjct: 662 gcggaggcgccgccgccgac 681
>ref|NM_191761.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1386 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gaggtcgtcggcgacggcgg 565 |||||||||||||||||||| Sbjct: 888 gaggtcgtcggcgacggcgg 869
>ref|XM_478587.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 882 cgccgccgccgacgtcgctg 863
>ref|XM_530154.1| PREDICTED: Pan troglodytes LOC457125 (LOC457125), mRNA Length = 804 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tccagctcctcctccaccgc 194 |||||||||||||||||||| Sbjct: 515 tccagctcctcctccaccgc 534
>ref|XM_472813.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 cgaggtcgtcggcgacggcg 564 |||||||||||||||||||| Sbjct: 129 cgaggtcgtcggcgacggcg 148
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 acgaggtcgtcggcgacggc 563 |||||||||||||||||||| Sbjct: 3041426 acgaggtcgtcggcgacggc 3041445
>gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084F23, complete sequence Length = 89829 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 551 cgtcggcgacggcggtgcggcggc 574 ||||||||||||||| |||||||| Sbjct: 63007 cgtcggcgacggcggcgcggcggc 63030
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 gcctacgacacgcgcggcgccggc 350 ||||||||| |||||||||||||| Sbjct: 66006 gcctacgacgcgcgcggcgccggc 66029
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 319 ccgcgctcgcctacgacacgcgcggcgccggc 350 |||||||| ||||||||| | ||||||||||| Sbjct: 59325 ccgcgctctcctacgacaggggcggcgccggc 59294
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 tcctccaccgcggcaagatcgccg 207 |||||||||||||| ||||||||| Sbjct: 1917087 tcctccaccgcggcgagatcgccg 1917064
>gb|AC115722.12| Mus musculus chromosome 5, clone RP23-16N23, complete sequence Length = 194380 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 aaaacccaacaccaccaaagcattccca 30 |||||| ||||||||||| ||||||||| Sbjct: 27857 aaaaccaaacaccaccaaggcattccca 27884
>ref|XM_610891.2| PREDICTED: Bos taurus similar to Transcription factor MafB (V-maf musculoaponeurotic fibrosarcoma oncogene homolog B) (LOC532376), mRNA Length = 3301 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ccaccaagcgtcgccgccgc 428 |||||||||||||||||||| Sbjct: 806 ccaccaagcgtcgccgccgc 825
>ref|XM_954460.1| Neurospora crassa OR74A hypothetical protein (NCU06091.1) partial mRNA Length = 1050 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 70 cgccgccgccgacgtcgctg 51
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 gcctacgacacgcgcggcgccggc 350 ||||||||| |||||||||||||| Sbjct: 8667 gcctacgacgcgcgcggcgccggc 8690
>ref|XM_325945.1| Neurospora crassa OR74A hypothetical protein (NCU06091.1) partial mRNA Length = 1050 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 70 cgccgccgccgacgtcgctg 51
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 gcggaggcgccgccgccgacgtcg 296 |||||||||||||||||| ||||| Sbjct: 21715 gcggaggcgccgccgccgccgtcg 21692
>ref|NM_199079.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (Ddx17), transcript variant 2, mRNA Length = 2860 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 210 cagcggaggcgccgccgccg 229
>ref|NM_199080.2| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (Ddx17), transcript variant 1, mRNA Length = 4772 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 391 cagcggaggcgccgccgccg 410
>ref|NM_001040187.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (Ddx17), transcript variant 4, mRNA Length = 4766 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 391 cagcggaggcgccgccgccg 410
>gb|AC126424.12| Mus musculus chromosome 17, clone RP23-19K10, complete sequence Length = 182696 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ggagttcagctgcagcaaca 378 |||||||||||||||||||| Sbjct: 134554 ggagttcagctgcagcaaca 134535
>ref|NM_001010898.1| Homo sapiens solute carrier family 6, member 17 (SLC6A17), mRNA Length = 6420 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tccagctcctcctccaccgc 194 |||||||||||||||||||| Sbjct: 645 tccagctcctcctccaccgc 626
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 gcggaggcgccgccgccgacgtcg 296 |||||||||||||||||| ||||| Sbjct: 88007 gcggaggcgccgccgccgccgtcg 87984
>ref|XM_993739.1| PREDICTED: Mus musculus cDNA sequence AK129128 (AK129128), mRNA Length = 5001 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 158 agttcagctgcagcaacacc 139
>ref|XM_922094.2| PREDICTED: Mus musculus cDNA sequence AK129128, transcript variant 5 (AK129128), mRNA Length = 5781 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 538 agttcagctgcagcaacacc 519
>ref|XM_898433.2| PREDICTED: Mus musculus cDNA sequence AK129128, transcript variant 2 (AK129128), mRNA Length = 5381 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 538 agttcagctgcagcaacacc 519
>ref|XM_542997.2| PREDICTED: Canis familiaris similar to Transcription factor MafB (V-maf musculoaponeurotic fibrosarcoma oncogene homolog B) (LOC485873), mRNA Length = 1227 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ccaccaagcgtcgccgccgc 428 |||||||||||||||||||| Sbjct: 504 ccaccaagcgtcgccgccgc 523
>gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome 13, complete sequence Length = 208096 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 10563 agttcagctgcagcaacacc 10582
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 cggcgacggcggtgcggcgg 573 |||||||||||||||||||| Sbjct: 14191 cggcgacggcggtgcggcgg 14172
>ref|XM_547368.2| PREDICTED: Canis familiaris similar to calmodulin regulated spectrin-associated protein 1-like 1 (LOC490247), mRNA Length = 7075 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 ccccgtcctacccatccatc 398 |||||||||||||||||||| Sbjct: 2878 ccccgtcctacccatccatc 2897
>gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-333I24, complete sequence Length = 215829 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 gcgccgccgccgacgtcgctgtcg 302 ||||||||||||||||| |||||| Sbjct: 56791 gcgccgccgccgacgtcactgtcg 56814
>gb|AC110238.10| Mus musculus chromosome 5, clone RP23-106D12, complete sequence Length = 197964 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 aaaacccaacaccaccaaagcattccca 30 |||||| ||||||||||| ||||||||| Sbjct: 25965 aaaaccaaacaccaccaaggcattccca 25938
>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0022F22, from chromosome 3, complete sequence Length = 144268 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 cggcgacggcggtgcggcgg 573 |||||||||||||||||||| Sbjct: 6970 cggcgacggcggtgcggcgg 6989
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgccgccgacgtcgctgtcg 302 |||||||||||||||||||| Sbjct: 3718758 cgccgccgacgtcgctgtcg 3718739
>emb|AL355990.18| Human DNA sequence from clone RP5-1028L10 on chromosome 1 Contains the 5' end of gene LOC284462, two novel genes and a CpG island, complete sequence Length = 47338 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tccagctcctcctccaccgc 194 |||||||||||||||||||| Sbjct: 23650 tccagctcctcctccaccgc 23631
>emb|CR858787.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0439 (from clone DKFZp469C0439) Length = 2334 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 409 agttcagctgcagcaacacc 390
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgccgccgacgtcgctgtcg 302 |||||||||||||||||||| Sbjct: 3622432 cgccgccgacgtcgctgtcg 3622413
>emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032D24, complete sequence Length = 132465 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 cgtcgctgtcgcgccgcgccctcg 315 ||||||||||||||||||| |||| Sbjct: 85205 cgtcgctgtcgcgccgcgcgctcg 85182
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 cgaggtcgtcggcgacggcg 564 |||||||||||||||||||| Sbjct: 121067 cgaggtcgtcggcgacggcg 121048
>gb|AC117806.11| Mus musculus chromosome 15, clone RP24-566D14, complete sequence Length = 194925 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 78403 cagcggaggcgccgccgccg 78384
>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0011L09, complete sequence Length = 121055 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agccgagcatggcgccgcgg 98 |||||||||||||||||||| Sbjct: 39869 agccgagcatggcgccgcgg 39888
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 agccgagcatggcgccgcgg 98 |||||||||||||||||||| Sbjct: 20132 agccgagcatggcgccgcgg 20113
>gb|AC109518.6| Homo sapiens BAC clone RP11-492P11 from 4, complete sequence Length = 172189 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggaagctgtccatggatctc 176 |||||||||||||||||||| Sbjct: 119349 ggaagctgtccatggatctc 119368
>dbj|AK134255.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930409B09 product:hypothetical TPR repeat/TPR-like/Protein prenyltransferase containing protein, full insert sequence Length = 1734 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 484 agttcagctgcagcaacacc 465
>dbj|AK151061.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022F15 product:Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17) homolog [Homo sapiens], full insert sequence Length = 2869 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 166 cagcggaggcgccgccgccg 185
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gccgccgccgacgtcgctgt 300 |||||||||||||||||||| Sbjct: 95140 gccgccgccgacgtcgctgt 95121
>dbj|AK152831.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830087A19 product:Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17) homolog [Homo sapiens], full insert sequence Length = 2869 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 166 cagcggaggcgccgccgccg 185
>dbj|AK152749.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830083L17 product:Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17) homolog [Homo sapiens], full insert sequence Length = 2872 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 166 cagcggaggcgccgccgccg 185
>dbj|AK164627.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430042C19 product:hypothetical TPR repeat/TPR-like containing protein, full insert sequence Length = 2619 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 539 agttcagctgcagcaacacc 520
>dbj|AK161012.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022448N16 product:Similar to P68 RNA helicase homolog [Mus musculus], full insert sequence Length = 3246 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 206 cagcggaggcgccgccgccg 225
>dbj|AK161001.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022439H17 product:DEAD box polypeptide 17, isoform 2, full insert sequence Length = 2821 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 207 cagcggaggcgccgccgccg 226
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cggcaagatcgccggcaagg 213 |||||||||||||||||||| Sbjct: 2800983 cggcaagatcgccggcaagg 2801002
>gb|AC008043.5| Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone BACR05A08, complete sequence Length = 169581 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 caagcgtcgccgccgcaaca 432 |||||||||||||||||||| Sbjct: 149065 caagcgtcgccgccgcaaca 149084
>dbj|AK039888.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430025E01 product:similar to P68 RNA HELICASE (FRAGMENT) [Mus musculus], full insert sequence Length = 1997 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 210 cagcggaggcgccgccgccg 229
>ref|NM_059321.2| Caenorhabditis elegans B0207.1 (B0207.1) mRNA, complete cds Length = 1695 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tctccagctcctcctccacc 192 |||||||||||||||||||| Sbjct: 430 tctccagctcctcctccacc 449
>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete sequence Length = 287397 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 caagcgtcgccgccgcaaca 432 |||||||||||||||||||| Sbjct: 131879 caagcgtcgccgccgcaaca 131898
>gb|DQ054802.1| Ovis aries v-maf musculoaponeurotic fibrosarcoma oncogene protein B (MafB) mRNA, partial cds Length = 414 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ccaccaagcgtcgccgccgc 428 |||||||||||||||||||| Sbjct: 34 ccaccaagcgtcgccgccgc 53
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 cggcgacggcggtgcggcgg 573 |||||||||||||||||||| Sbjct: 22254273 cggcgacggcggtgcggcgg 22254292
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 cgtcggcgacggcggtgcggcggc 574 ||||||||||||||| |||||||| Sbjct: 7495094 cgtcggcgacggcggcgcggcggc 7495071
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agccgagcatggcgccgcgg 98 |||||||||||||||||||| Sbjct: 12743430 agccgagcatggcgccgcgg 12743449
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gaggtcgtcggcgacggcgg 565 |||||||||||||||||||| Sbjct: 19376495 gaggtcgtcggcgacggcgg 19376514
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 21302192 cgccgccgccgacgtcgctg 21302211
>gb|BC096036.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, transcript variant 1, mRNA (cDNA clone MGC:106444 IMAGE:30549388), complete cds Length = 4741 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 391 cagcggaggcgccgccgccg 410
>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone BACR09L14, complete sequence Length = 167368 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 caagcgtcgccgccgcaaca 432 |||||||||||||||||||| Sbjct: 41699 caagcgtcgccgccgcaaca 41718
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gaggtcgtcggcgacggcgg 565 |||||||||||||||||||| Sbjct: 60742 gaggtcgtcggcgacggcgg 60761
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gcggaggcgccgccgccgacgtcg 296 ||||||||||||||||||| |||| Sbjct: 2226481 gcggaggcgccgccgccgatgtcg 2226504
>ref|XM_226606.3| PREDICTED: Rattus norvegicus similar to KIAA0372 gene product (predicted) (LOC294595), mRNA Length = 4602 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 197 agttcagctgcagcaacacc 178
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gcgccgcgccctcgaccccgcgctcgcc 329 ||||||||| ||||| |||||||||||| Sbjct: 146074 gcgccgcgcactcgaacccgcgctcgcc 146101
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggaggcgccgccgccgac 292 |||||||||||||||||||| Sbjct: 24787 gcggaggcgccgccgccgac 24768
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggaggcgccgccgccgac 292 |||||||||||||||||||| Sbjct: 111417 gcggaggcgccgccgccgac 111398
>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021M10 Length = 163416 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 ggcgacggcggtgcggcggc 574 |||||||||||||||||||| Sbjct: 66316 ggcgacggcggtgcggcggc 66335
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 22360 cgccgccgccgacgtcgctg 22379
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 88477 cgccgccgccgacgtcgctg 88496
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gaggtcgtcggcgacggcgg 565 |||||||||||||||||||| Sbjct: 43722 gaggtcgtcggcgacggcgg 43703
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gcgccgcgccctcgaccccgcgctcgcc 329 ||||||||| ||||| |||||||||||| Sbjct: 52271 gcgccgcgcactcgaacccgcgctcgcc 52298
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 cggcggtgcggcggccctcg 579 |||||||||||||||||||| Sbjct: 158966 cggcggtgcggcggccctcg 158947
>ref|XM_311856.2| Anopheles gambiae str. PEST ENSANGP00000018215 (ENSANGG00000015726), partial mRNA Length = 5275 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 481 acaactacgacgcggccgacattgccaa 508 |||||||||||||| ||||||| ||||| Sbjct: 3450 acaactacgacgcgcccgacatcgccaa 3477
>dbj|AK109863.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H07, full insert sequence Length = 1401 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 gccaacggcgcggagccagg 475 |||||||||||||||||||| Sbjct: 1209 gccaacggcgcggagccagg 1190
>gb|U97196.2| Caenorhabditis elegans cosmid B0207, complete sequence Length = 55984 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tctccagctcctcctccacc 192 |||||||||||||||||||| Sbjct: 46485 tctccagctcctcctccacc 46504
>dbj|AK067860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124G10, full insert sequence Length = 2138 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gaggtcgtcggcgacggcgg 565 |||||||||||||||||||| Sbjct: 240 gaggtcgtcggcgacggcgg 259
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 acgagcagctgctgaacgaggtcg 552 |||||||||||| ||||||||||| Sbjct: 783852 acgagcagctgcagaacgaggtcg 783875
>dbj|AK067046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091L24, full insert sequence Length = 883 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 agccgagcatggcgccgcgg 98 |||||||||||||||||||| Sbjct: 388 agccgagcatggcgccgcgg 369
>gb|BC062910.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, transcript variant 2, mRNA (cDNA clone MGC:79147 IMAGE:6816663), complete cds Length = 2846 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cagcggaggcgccgccgccg 290 |||||||||||||||||||| Sbjct: 196 cagcggaggcgccgccgccg 215
>dbj|AK064996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D21, full insert sequence Length = 1755 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 cggcgacggcggtgcggcgg 573 |||||||||||||||||||| Sbjct: 75 cggcgacggcggtgcggcgg 56
>dbj|AK060769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B01, full insert sequence Length = 1898 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gccgccgccgacgtcgctgt 300 |||||||||||||||||||| Sbjct: 160 gccgccgccgacgtcgctgt 179
>emb|CT033750.18| Mouse DNA sequence from clone RP23-263M5 on chromosome 17, complete sequence Length = 268616 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ggagttcagctgcagcaaca 378 |||||||||||||||||||| Sbjct: 220085 ggagttcagctgcagcaaca 220066
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agccgagcatggcgccgcgg 98 |||||||||||||||||||| Sbjct: 12750770 agccgagcatggcgccgcgg 12750789
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 cgtcggcgacggcggtgcggcggc 574 ||||||||||||||| |||||||| Sbjct: 7565180 cgtcggcgacggcggcgcggcggc 7565157
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 cggcgacggcggtgcggcgg 573 |||||||||||||||||||| Sbjct: 22182618 cggcgacggcggtgcggcgg 22182637
>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109610 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 cggcgacggcggtgcggcgg 573 |||||||||||||||||||| Sbjct: 107481 cggcgacggcggtgcggcgg 107462
>gb|AC156981.13| Mus musculus chromosome 18, clone RP23-145E3, complete sequence Length = 210762 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctctcactcctcagtcctc 61 |||||||||||||||||||| Sbjct: 34407 tctctcactcctcagtcctc 34426
>emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chromosome 13, complete sequence Length = 199355 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 46386 agttcagctgcagcaacacc 46367
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 caccgcggcgccaacggcgc 466 |||||||||||||||||||| Sbjct: 21815 caccgcggcgccaacggcgc 21796
>emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete sequence Length = 222471 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tcctacccatccatccaact 403 |||||||||||||||||||| Sbjct: 217199 tcctacccatccatccaact 217218 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,562,941 Number of Sequences: 3902068 Number of extensions: 5562941 Number of successful extensions: 148471 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 141483 Number of HSP's gapped (non-prelim): 6986 length of query: 587 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 564 effective length of database: 17,143,297,704 effective search space: 9668819905056 effective search space used: 9668819905056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
