ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart19f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
2dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
3emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 50 0.008
4gb|AC169087.3| Gallus gallus BAC clone CH261-119D18 from chromos... 46 0.12
5dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 44 0.47
6emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chr... 42 1.8
7gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.8
8gb|U43083.1|HSU43083 Human G alpha-q (Gaq) mRNA, complete cds 42 1.8
9ref|XM_525528.1| PREDICTED: Pan troglodytes similar to positive ... 40 7.3
10gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.3
11gb|U80745.1|HSU80745 Homo sapiens CTG7a mRNA, partial cds 40 7.3
12gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 7.3
13ref|XM_588183.2| PREDICTED: Bos taurus similar to Akt-phosphoryl... 40 7.3
14ref|XM_959629.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.3
15ref|XM_324740.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.3
16ref|XR_003386.1| PREDICTED: Mus musculus similar to sterile alph... 40 7.3
17ref|XM_985521.1| PREDICTED: Mus musculus similar to sterile alph... 40 7.3
18gb|AC133648.3| Mus musculus BAC clone RP23-291B1 from chromosome... 40 7.3
19ref|XM_571398.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 7.3
20gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosom... 40 7.3
21ref|NM_015889.3| Homo sapiens PC2 (positive cofactor 2, multipro... 40 7.3
22ref|NM_001003891.1| Homo sapiens PC2 (positive cofactor 2, multi... 40 7.3
23emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4,... 40 7.3
24gb|BC013985.2| Homo sapiens PC2 (positive cofactor 2, multiprote... 40 7.3
25gb|BC003078.1| Homo sapiens PC2 (positive cofactor 2, multiprote... 40 7.3
26gb|BC017110.1| Homo sapiens PC2 (positive cofactor 2, multiprote... 40 7.3
27emb|CR860021.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0325 (from cl... 40 7.3
28dbj|AK126208.1| Homo sapiens cDNA FLJ44220 fis, clone THYMU30048... 40 7.3
29emb|CR611888.1| full-length cDNA clone CS0DI081YK14 of Placenta ... 40 7.3
30gb|AC128639.13| Papio anubis clone rp41-2d18, complete sequence 40 7.3
31gb|AY895166.1| Gallus gallus BAC bW108010 chemokine-like ligand ... 40 7.3
32gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.3
33gb|AF328769.1|AF328769 Homo sapiens PC2-glutamine-rich-associate... 40 7.3
34gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 I... 40 7.3
35gb|AC006946.20| Homo sapiens Chromosome 22q11 Pac Clone p109l3 i... 40 7.3
36gb|AC007050.25| Homo sapiens chromosome 22 clone bac32 map 22q11... 40 7.3
37dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
39gb|AC008205.7|AC008205 Drosophila melanogaster, chromosome 3R, r... 40 7.3
40gb|AF056191.1|AF056191 Homo sapiens TPA inducible protein mRNA, ... 40 7.3
41dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
42dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
43emb|AJ514427.1|ECA514427 Equus caballus mRNA for aquaporin 5 (aq... 40 7.3
44dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
45dbj|AK108999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
46ref|NM_212417.1| Eremothecium gossypii AFR733Wp (AFR733W), mRNA 40 7.3
47emb|CR456537.1| Homo sapiens PCQAP full length open reading fram... 40 7.3
48gb|AE003749.3| Drosophila melanogaster chromosome 3R, section 87... 40 7.3
49gb|AY610211.1| Sus scrofa clone Clu_9762.scr.msk.p1.Contig1, mRN... 40 7.3
50gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome... 40 7.3
51emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chr... 40 7.3
52dbj|AK090465.1| Homo sapiens mRNA for FLJ00386 protein 40 7.3 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                            
Query: 38       aaatggcgctcctcccgctgctcctcgcggccctcatcgtctcctgctccgctcagcagc 97
                |||||||||||||||||||| ||||||||  |||| ||| ||||  | |||| |||||||
Sbjct: 26355420 aaatggcgctcctcccgctggtcctcgcgctcctcgtcgcctccgccgccgcgcagcagc 26355479

                                                     
Query: 98       caccgatgcagccgccgccaacacccaacgcgccgcc 134
                |||||| |||| |||||||  | ||||||||||||||
Sbjct: 26355480 caccgacgcagtcgccgccggctcccaacgcgccgcc 26355516



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 361      cccaccaccccgcctccggctcccccgacgcagcctccgcccgctcccaccac 413
                |||||||||||||| ||| |||||||| ||  ||| |||||||||||||||||
Sbjct: 26355641 cccaccaccccgccgccgtctcccccggcgacgcccccgcccgctcccaccac 26355693



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 338      cgccggccacccctccacctgctcccaccaccccgcctccggc 380
                ||||| |||||||||| || ||||||||||| |||||||||||
Sbjct: 26355576 cgccgaccacccctcctccggctcccaccacgccgcctccggc 26355618



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                    
Query: 365      ccaccccgcctccggctcccccgacgcagcctccgcccgctcccaccacccc 416
                |||||||||| ||| |||||||| ||  ||| |||||||||||| |||||||
Sbjct: 26355735 ccaccccgccgccgtctcccccggcgacgcccccgcccgctcccgccacccc 26355786



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 311      ccacccctcctccggctcccac 332
                ||||||||||||||||||||||
Sbjct: 26355582 ccacccctcctccggctcccac 26355603



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 364      accaccccgcctccggctcccccgacgcagcctccg 399
                |||||||| |||||||||||| | |||| |||||||
Sbjct: 26355581 accacccctcctccggctcccaccacgccgcctccg 26355616
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>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:P0491E01
          Length = 136150

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                         
Query: 38    aaatggcgctcctcccgctgctcctcgcggccctcatcgtctcctgctccgctcagcagc 97
             |||||||||||||||||||| ||||||||  |||| ||| ||||  | |||| |||||||
Sbjct: 87772 aaatggcgctcctcccgctggtcctcgcgctcctcgtcgcctccgccgccgcgcagcagc 87831

                                                  
Query: 98    caccgatgcagccgccgccaacacccaacgcgccgcc 134
             |||||| |||| |||||||  | ||||||||||||||
Sbjct: 87832 caccgacgcagtcgccgccggctcccaacgcgccgcc 87868



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 361   cccaccaccccgcctccggctcccccgacgcagcctccgcccgctcccaccac 413
             |||||||||||||| ||| |||||||| ||  ||| |||||||||||||||||
Sbjct: 87993 cccaccaccccgccgccgtctcccccggcgacgcccccgcccgctcccaccac 88045



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 338   cgccggccacccctccacctgctcccaccaccccgcctccggc 380
             ||||| |||||||||| || ||||||||||| |||||||||||
Sbjct: 87928 cgccgaccacccctcctccggctcccaccacgccgcctccggc 87970



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                 
Query: 365   ccaccccgcctccggctcccccgacgcagcctccgcccgctcccaccacccc 416
             |||||||||| ||| |||||||| ||  ||| |||||||||||| |||||||
Sbjct: 88087 ccaccccgccgccgtctcccccggcgacgcccccgcccgctcccgccacccc 88138



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 311   ccacccctcctccggctcccac 332
             ||||||||||||||||||||||
Sbjct: 87934 ccacccctcctccggctcccac 87955



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 364   accaccccgcctccggctcccccgacgcagcctccg 399
             |||||||| |||||||||||| | |||| |||||||
Sbjct: 87933 accacccctcctccggctcccaccacgccgcctccg 87968
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 38    aaatggcgctcctcccgctgctcctcgcg 66
             |||||||||||||||||||| ||||||||
Sbjct: 78564 aaatggcgctcctcccgctggtcctcgcg 78592



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                 
Query: 365   ccaccccgcctccggctcccccgacgcagcctccgcccgctcccaccacccc 416
             |||||||||| ||| |||||||| ||  ||| |||||||||||| |||||||
Sbjct: 78878 ccaccccgccgccgtctcccccggcgacgcccccgcccgctcccgccacccc 78929
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>gb|AC169087.3| Gallus gallus BAC clone CH261-119D18 from chromosome ul, complete
              sequence
          Length = 225652

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 344    ccacccctccacctgctcccacc 366
              |||||||||||||||||||||||
Sbjct: 102661 ccacccctccacctgctcccacc 102639
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 482     ctccaccgcccgccacgcctcctccg 507
               |||||||||||||| |||||||||||
Sbjct: 1503375 ctccaccgcccgcctcgcctcctccg 1503400
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>emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chromosome 9 Contains the 5'
              end of the GNAQ gene for guanine nucleotide binding protein
              (G protein) q polypeptide and a CpG island, complete
              sequence
          Length = 215399

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 190    gctcccaccgcgcccccggcc 210
              |||||||||||||||||||||
Sbjct: 167503 gctcccaccgcgcccccggcc 167483
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 291    tccggcgccgcaggctcccgc 311
              |||||||||||||||||||||
Sbjct: 288275 tccggcgccgcaggctcccgc 288255
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>gb|U43083.1|HSU43083 Human G alpha-q (Gaq) mRNA, complete cds
          Length = 1700

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 190 gctcccaccgcgcccccggcc 210
           |||||||||||||||||||||
Sbjct: 19  gctcccaccgcgcccccggcc 39
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>ref|XM_525528.1| PREDICTED: Pan troglodytes similar to positive cofactor 2,
            glutamine/Q-rich-associated protein isoform b;
            PC2-glutamine-rich-associated protein; TPA inducible
            gene-1; trinucleotide repeat containing 7; TPA inducible
            protein; activator-recruited cofactor, 105-kD; CTG repeat
            p... (LOC470144), mRNA
          Length = 4350

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   tcagcagccaccgatgcagc 109
            ||||||||||||||||||||
Sbjct: 2202 tcagcagccaccgatgcagc 2221
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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
               sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 341     cggccacccctccacctgctccca 364
               ||||||||||||||||| ||||||
Sbjct: 1276005 cggccacccctccacctcctccca 1275982
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>gb|U80745.1|HSU80745 Homo sapiens CTG7a mRNA, partial cds
          Length = 1048

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 258 tcagcagccaccgatgcagc 277
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 368     ccccgcctccggctcccccg 387
               ||||||||||||||||||||
Sbjct: 2462174 ccccgcctccggctcccccg 2462193
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>ref|XM_588183.2| PREDICTED: Bos taurus similar to Akt-phosphorylation enhancer
            (LOC510943), mRNA
          Length = 4761

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 371  cgcctccggctcccccgacgcagcctcc 398
            ||||||| |||||| |||||||||||||
Sbjct: 2445 cgcctcccgctcccgcgacgcagcctcc 2418
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>ref|XM_959629.1| Neurospora crassa OR74A hypothetical protein (NCU00561.1) partial
           mRNA
          Length = 1329

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 343 gccacccctccacctgctcc 362
           ||||||||||||||||||||
Sbjct: 752 gccacccctccacctgctcc 771
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>ref|XM_324740.1| Neurospora crassa OR74A hypothetical protein (NCU00561.1) partial
           mRNA
          Length = 1329

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 343 gccacccctccacctgctcc 362
           ||||||||||||||||||||
Sbjct: 752 gccacccctccacctgctcc 771
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>ref|XR_003386.1| PREDICTED: Mus musculus similar to sterile alpha motif domain
           containing 1 (LOC671345), mRNA
          Length = 1720

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 181 ccgcctccagctcccaccgcgcccccggccgc 212
           ||||| ||||| ||| ||||||||||||||||
Sbjct: 154 ccgccaccagcgcccgccgcgcccccggccgc 185
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>ref|XM_985521.1| PREDICTED: Mus musculus similar to sterile alpha motif domain
           containing 1 (LOC666704), mRNA
          Length = 2071

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 181 ccgcctccagctcccaccgcgcccccggccgc 212
           ||||| ||||| ||| ||||||||||||||||
Sbjct: 505 ccgccaccagcgcccgccgcgcccccggccgc 536
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>gb|AC133648.3| Mus musculus BAC clone RP23-291B1 from chromosome 7, complete sequence
          Length = 207234

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   ccacctgctcccaccacccc 371
             ||||||||||||||||||||
Sbjct: 37346 ccacctgctcccaccacccc 37365
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>ref|XM_571398.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNF04390) partial mRNA
          Length = 2294

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 341 cggccacccctccacctgctccca 364
           ||||||||||||||||| ||||||
Sbjct: 239 cggccacccctccacctcctccca 262
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>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence
          Length = 170182

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   cctcctccggctcccacaag 335
             ||||||||||||||||||||
Sbjct: 33991 cctcctccggctcccacaag 33972
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>ref|NM_015889.3| Homo sapiens PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein (PCQAP), transcript
           variant 2, mRNA
          Length = 3264

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 890 tcagcagccaccgatgcagc 909
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>ref|NM_001003891.1| Homo sapiens PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein (PCQAP), transcript
           variant 1, mRNA
          Length = 3384

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 890 tcagcagccaccgatgcagc 909
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>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08,
              complete sequence
          Length = 145670

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     ctcctcccgctgctcctcgc 65
              ||||||||||||||||||||
Sbjct: 106847 ctcctcccgctgctcctcgc 106828
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>gb|BC013985.2| Homo sapiens PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein, transcript variant
           2, mRNA (cDNA clone MGC:20267 IMAGE:3506327), complete
           cds
          Length = 3227

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 850 tcagcagccaccgatgcagc 869
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>gb|BC003078.1| Homo sapiens PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein, mRNA (cDNA clone
           IMAGE:3504608), partial cds
          Length = 3240

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 868 tcagcagccaccgatgcagc 887
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>gb|BC017110.1| Homo sapiens PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein, mRNA (cDNA clone
           IMAGE:3604453)
          Length = 3067

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 575 tcagcagccaccgatgcagc 594
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>emb|CR860021.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0325 (from clone DKFZp459O0325)
          Length = 3256

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 887 tcagcagccaccgatgcagc 906
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>dbj|AK126208.1| Homo sapiens cDNA FLJ44220 fis, clone THYMU3004866, moderately
            similar to Homo sapiens PC2 (positive cofactor 2,
            multiprotein complex) glutamine/Q-rich-associated protein
            (PCQAP)
          Length = 3622

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   tcagcagccaccgatgcagc 109
            ||||||||||||||||||||
Sbjct: 1272 tcagcagccaccgatgcagc 1291
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>emb|CR611888.1| full-length cDNA clone CS0DI081YK14 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 2700

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 362 tcagcagccaccgatgcagc 381
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>gb|AC128639.13| Papio anubis clone rp41-2d18, complete sequence
          Length = 173331

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tcagcagccaccgatgcagc 109
             ||||||||||||||||||||
Sbjct: 62736 tcagcagccaccgatgcagc 62717
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>gb|AY895166.1| Gallus gallus BAC bW108010 chemokine-like ligand 1, SCYA4, chemokine
             K203, and chemokine ah294 genes, complete cds
          Length = 112034

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    cctcccgctgctcctcgcggccct 71
             |||||||||||||||||| |||||
Sbjct: 61861 cctcccgctgctcctcgcagccct 61838
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 489     gcccgccacgcctcctccga 508
               ||||||||||||||||||||
Sbjct: 1784738 gcccgccacgcctcctccga 1784719
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>gb|AF328769.1|AF328769 Homo sapiens PC2-glutamine-rich-associated protein (PCQAP) mRNA,
           complete cds
          Length = 3170

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 804 tcagcagccaccgatgcagc 823
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>gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 In BCRL2-GGT Region,
              complete sequence
          Length = 145356

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     tcagcagccaccgatgcagc 109
              ||||||||||||||||||||
Sbjct: 103902 tcagcagccaccgatgcagc 103921
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>gb|AC006946.20| Homo sapiens Chromosome 22q11 Pac Clone p109l3 in CES region, complete
              sequence
          Length = 193159

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gcgctcctcccgctgctcct 62
              ||||||||||||||||||||
Sbjct: 104289 gcgctcctcccgctgctcct 104270
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>gb|AC007050.25| Homo sapiens chromosome 22 clone bac32 map 22q11, complete sequence
          Length = 163908

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tcagcagccaccgatgcagc 109
             ||||||||||||||||||||
Sbjct: 14680 tcagcagccaccgatgcagc 14699
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 46       ctcctcccgctgctcctcgc 65
                ||||||||||||||||||||
Sbjct: 19325015 ctcctcccgctgctcctcgc 19324996
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 357      tgctcccaccaccccgcctc 376
                ||||||||||||||||||||
Sbjct: 16438298 tgctcccaccaccccgcctc 16438317
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>gb|AC008205.7|AC008205 Drosophila melanogaster, chromosome 3R, region 96A-96B, BAC clone
             BACR33F18, complete sequence
          Length = 215711

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 347   cccctccacctgctcccaccaccc 370
             |||||||||||| |||||||||||
Sbjct: 79863 cccctccacctgatcccaccaccc 79886
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>gb|AF056191.1|AF056191 Homo sapiens TPA inducible protein mRNA, complete cds
          Length = 3334

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 896 tcagcagccaccgatgcagc 915
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>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0404G03
          Length = 135225

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   tgctcccaccaccccgcctc 376
             ||||||||||||||||||||
Sbjct: 47616 tgctcccaccaccccgcctc 47635
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>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0008F02
          Length = 139655

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    tgctcccaccaccccgcctc 376
              ||||||||||||||||||||
Sbjct: 114861 tgctcccaccaccccgcctc 114880
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>emb|AJ514427.1|ECA514427 Equus caballus mRNA for aquaporin 5 (aqp5 gene)
          Length = 727

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  cgctcctcccgctgctcctc 63
           ||||||||||||||||||||
Sbjct: 219 cgctcctcccgctgctcctc 200
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>dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C04, full
           insert sequence
          Length = 3464

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 166 cctccggccggcaacccgcc 185
           ||||||||||||||||||||
Sbjct: 881 cctccggccggcaacccgcc 900
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>dbj|AK108999.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-G09, full
           insert sequence
          Length = 1206

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 190 gctcccaccgcgcccccggccgcc 213
           ||||| ||||||||||||||||||
Sbjct: 324 gctccgaccgcgcccccggccgcc 347
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>ref|NM_212417.1| Eremothecium gossypii AFR733Wp (AFR733W), mRNA
          Length = 1392

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 489 gcccgccacgcctcctccga 508
           ||||||||||||||||||||
Sbjct: 203 gcccgccacgcctcctccga 184
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>emb|CR456537.1| Homo sapiens PCQAP full length open reading frame (ORF) cDNA clone
           (cDNA clone C22ORF:pGEM.PCQAP.V2)
          Length = 2226

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 626 tcagcagccaccgatgcagc 645
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>gb|AE003749.3| Drosophila melanogaster chromosome 3R, section 87 of 118 of the
             complete sequence
          Length = 228433

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 347   cccctccacctgctcccaccaccc 370
             |||||||||||| |||||||||||
Sbjct: 83433 cccctccacctgatcccaccaccc 83456
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>gb|AY610211.1| Sus scrofa clone Clu_9762.scr.msk.p1.Contig1, mRNA sequence
          Length = 2291

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   cgctcctcccgctgctcctc 63
            ||||||||||||||||||||
Sbjct: 2038 cgctcctcccgctgctcctc 2057
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>gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome 8, complete sequence
          Length = 212724

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 181    ccgcctccagctcccaccgcgcccccggccgc 212
              ||||| ||||| ||| ||||||||||||||||
Sbjct: 164887 ccgccaccagcgcccgccgcgcccccggccgc 164918
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>emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chromosome 14, complete
              sequence
          Length = 194408

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    gccacccctccacctgctcc 362
              ||||||||||||||||||||
Sbjct: 157391 gccacccctccacctgctcc 157372
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>dbj|AK090465.1| Homo sapiens mRNA for FLJ00386 protein
          Length = 3349

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcagcagccaccgatgcagc 109
           ||||||||||||||||||||
Sbjct: 879 tcagcagccaccgatgcagc 898


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,318,924
Number of Sequences: 3902068
Number of extensions: 3318924
Number of successful extensions: 80616
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80070
Number of HSP's gapped (non-prelim): 545
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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