ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart19e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CPXR_BRAJA (Q59204) Cytochrome P450 BJ-3 (EC 1.14.14.-) (Cytochr... 30 1.9
2UBP21_MOUSE (Q9QZL6) Ubiquitin carboxyl-terminal hydrolase 21 (E... 27 9.2

>CPXR_BRAJA (Q59204) Cytochrome P450 BJ-3 (EC 1.14.14.-) (Cytochrome P450 114)|
          Length = 429

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 205 ATGTVARASMRRCRSPTVAAAASGTVMRSVPSRLRMRRII 86
           A G +AR   R   SP++   AS   M+  P+  R+RR+I
Sbjct: 70  APGELARYFSRAATSPSLNLLASTLAMKDPPTHTRLRRLI 109



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>UBP21_MOUSE (Q9QZL6) Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15)|
          (Ubiquitin thioesterase 21) (Ubiquitin-specific
          processing protease 21) (Deubiquitinating enzyme 21)
          Length = 566

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 10 QSKAAAAIPSPRREKEKEKRHPQP 81
          Q +  A IP P R + KE+R+P P
Sbjct: 20 QPRVGAKIPFPPRARSKERRNPVP 43


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.299    0.118    0.334 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,764,422
Number of Sequences: 219361
Number of extensions: 195598
Number of successful extensions: 445
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
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