ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart19c09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G09, full insert sequence Length = 995 Score = 498 bits (251), Expect = e-137 Identities = 395/443 (89%) Strand = Plus / Plus Query: 122 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 160 Query: 182 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 241 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 161 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 220 Query: 242 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 301 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 221 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 280 Query: 302 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 361 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 281 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 340 Query: 362 caccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccga 421 ||| ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 341 cactggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctga 400 Query: 422 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 481 |||||| |||||||| ||||||||||| || || ||||||||||||||||| ||||| Sbjct: 401 attccgtttcaaatggggctatgagatgcccgtagacgtattagcaaaatggatagcaga 460 Query: 482 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 541 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 461 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 520 Query: 542 cctgggttatgatgaggagaaaa 564 | |||| ||||| || ||||||| Sbjct: 521 cttgggctatgacgaagagaaaa 543
>dbj|AK101031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150K05, full insert sequence Length = 1048 Score = 490 bits (247), Expect = e-135 Identities = 394/443 (88%) Strand = Plus / Plus Query: 122 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 172 Query: 182 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 241 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 173 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 232 Query: 242 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 301 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 233 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 292 Query: 302 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 361 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 293 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 352 Query: 362 caccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccga 421 ||| ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 353 cactggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctga 412 Query: 422 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 481 |||||| |||||||| || |||||||| || || ||||||||||||||||| ||||| Sbjct: 413 attccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcaga 472 Query: 482 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 541 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 473 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 532 Query: 542 cctgggttatgatgaggagaaaa 564 | |||| ||||| || ||||||| Sbjct: 533 cttgggctatgacgaagagaaaa 555
>dbj|AK060026.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C02, full insert sequence Length = 1043 Score = 490 bits (247), Expect = e-135 Identities = 394/443 (88%) Strand = Plus / Plus Query: 122 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 160 Query: 182 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 241 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 161 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 220 Query: 242 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 301 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 221 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 280 Query: 302 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 361 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 281 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 340 Query: 362 caccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccga 421 ||| ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 341 cactggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctga 400 Query: 422 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 481 |||||| |||||||| || |||||||| || || ||||||||||||||||| ||||| Sbjct: 401 attccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcaga 460 Query: 482 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 541 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 461 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 520 Query: 542 cctgggttatgatgaggagaaaa 564 | |||| ||||| || ||||||| Sbjct: 521 cttgggctatgacgaagagaaaa 543
>dbj|AK059929.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-A07, full insert sequence Length = 1042 Score = 490 bits (247), Expect = e-135 Identities = 394/443 (88%) Strand = Plus / Plus Query: 122 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 173 Query: 182 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 241 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 174 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 233 Query: 242 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 301 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 234 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 293 Query: 302 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 361 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 294 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 353 Query: 362 caccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccga 421 ||| ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 354 cactggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctga 413 Query: 422 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 481 |||||| |||||||| || |||||||| || || ||||||||||||||||| ||||| Sbjct: 414 attccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcaga 473 Query: 482 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 541 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 474 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 533 Query: 542 cctgggttatgatgaggagaaaa 564 | |||| ||||| || ||||||| Sbjct: 534 cttgggctatgacgaagagaaaa 556
>dbj|AB026558.1| Oryza sativa (japonica cultivar-group) OsPAA1 mRNA for alpha 1 subunit of 20S proteasome, complete cds Length = 1010 Score = 490 bits (247), Expect = e-135 Identities = 394/443 (88%) Strand = Plus / Plus Query: 122 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 138 Query: 182 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 241 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 139 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 198 Query: 242 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 301 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 199 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 258 Query: 302 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 361 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 259 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 318 Query: 362 caccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccga 421 ||| ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 319 cactggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctga 378 Query: 422 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 481 |||||| |||||||| || |||||||| || || ||||||||||||||||| ||||| Sbjct: 379 attccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcaga 438 Query: 482 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 541 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 439 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 498 Query: 542 cctgggttatgatgaggagaaaa 564 | |||| ||||| || ||||||| Sbjct: 499 cttgggctatgacgaagagaaaa 521
>ref|XM_470540.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 741 Score = 488 bits (246), Expect = e-134 Identities = 393/442 (88%) Strand = Plus / Plus Query: 123 atgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggagggc 182 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggagggc 60 Query: 183 cgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatc 242 ||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 61 cgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatc 120 Query: 243 ggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagttg 302 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 121 ggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagttg 180 Query: 303 ttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgcc 362 |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| ||| Sbjct: 181 ctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgcc 240 Query: 363 accggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccgag 422 || ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 241 actggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctgaa 300 Query: 423 ttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcagac 482 |||||| |||||||| || |||||||| || || ||||||||||||||||| |||||| Sbjct: 301 ttccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcagac 360 Query: 483 aaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggtc 542 ||||||||| | |||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 361 aaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggtc 420 Query: 543 ctgggttatgatgaggagaaaa 564 |||| ||||| || ||||||| Sbjct: 421 ttgggctatgacgaagagaaaa 442
>gb|AY104377.1| Zea mays PCO108605 mRNA sequence Length = 1142 Score = 448 bits (226), Expect = e-123 Identities = 391/446 (87%) Strand = Plus / Plus Query: 119 cgagatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccgga 178 |||||||||||| || | ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 87 cgagatgagccgtggcacaggcgcgggctatgaccgccacatcaccatcttctccccgga 146 Query: 179 gggccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctc 238 ||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 147 gggacgcctgtaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggtgtcacgtc 206 Query: 239 gatcggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaa 298 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gatcggcgtccgcggcgcggactccgtctgcgtcgtcacccagaagaaagtcccggacaa 266 Query: 299 gttgttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgct 358 |||| ||||| | || ||| | || ||| | ||| | || ||||||||| ||| ||||| Sbjct: 267 gttgctggatcagacgagcgtgacacacttgttcccgatcaccaagtacgtcggattgct 326 Query: 359 tgccaccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagc 418 |||||| ||||||||||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 327 tgccactggcctcacagctgatgcaaggtcattggtttcccaagcaaggaacgaagcagc 386 Query: 419 cgagttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgc 478 ||||| ||| |||||||| ||||||||||| || ||||| ||||||||||||||||| Sbjct: 387 tgagtttcgtttcaaatggggctatgagatgccagttgatgtgttagcaaaatggattgc 446 Query: 479 agacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctat 538 |||||||| ||| | |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 447 tgacaaagctcaagtttacacgcaacatgcatacatgagaccccttggagtagttgctat 506 Query: 539 ggtcctgggttatgatgaggagaaaa 564 |||| |||| || || || ||||||| Sbjct: 507 ggtcttgggctacgacgaagagaaaa 532
>emb|AJ293343.1|ZMA293343 Zea mays mRNA for maize 20S proteasome alpha subunit (paa gene) Length = 1040 Score = 416 bits (210), Expect = e-113 Identities = 387/446 (86%) Strand = Plus / Plus Query: 119 cgagatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccgga 178 |||||||||||| || | ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 78 cgagatgagccgtggcacaggcgcgggctatgaccgccacatcaccatcttctccccgga 137 Query: 179 gggccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctc 238 ||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 138 gggacgcctgtaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggtgtcacgtc 197 Query: 239 gatcggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaa 298 |||||||||||| ||| ||||||||||||||| || || ||||||||||||||||| || Sbjct: 198 gatcggcgtccgcggcgcggactccgtctgcgttgttacgcagaagaaagtcccggataa 257 Query: 299 gttgttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgct 358 |||| ||||| | || ||| | || ||||| ||| | || ||||||||| ||| ||||| Sbjct: 258 gttgctggatcagacgagcgtgacacacctgttcccgatcaccaagtacgtcggattgct 317 Query: 359 tgccaccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagc 418 |||||| ||||| |||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 318 tgccactggccttacagctgatggtaggtcattggtttcccaagcaaggaacgaagcagc 377 Query: 419 cgagttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgc 478 ||||| ||| |||||||| || |||||||| || ||||| ||||||||||||||||| Sbjct: 378 tgagtttcgtttcaaatggggctacgagatgccagttgatgtgttagcaaaatggattgc 437 Query: 479 agacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctat 538 |||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 438 tgacaaagctcaagtttacacgcagcatgcatacatgagaccccttggagtagttgctat 497 Query: 539 ggtcctgggttatgatgaggagaaaa 564 |||| |||| || ||||| ||||||| Sbjct: 498 ggtcttgggctacgatgaagagaaaa 523
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 198 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 257 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 4194339 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 4194280 Query: 258 gactccgtctgcgtcgtcacccagaagaaagtcccgg 294 |||||||||||||||||||| ||||||||||| |||| Sbjct: 4194279 gactccgtctgcgtcgtcacacagaagaaagtgccgg 4194243 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 122 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4194552 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 4194493 Query: 182 ccgcctctaccaagtcg 198 ||||||||||||||||| Sbjct: 4194492 ccgcctctaccaagtcg 4194476 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 373 cagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccgagttccgtaaaa 432 |||||||||| |||||||| |||| ||||||||| ||||| ||||| || |||||| | Sbjct: 4193453 cagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctgaattccgtttca 4193394 Query: 433 aatggggatatgagatgcctgtggatgtattagcaaaatgg 473 ||||||| || |||||||| || || ||||||||||||||| Sbjct: 4193393 aatggggctacgagatgcccgtagacgtattagcaaaatgg 4193353 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 472 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 531 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 4193239 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 4193180
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 198 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 257 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 4194448 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 4194389 Query: 258 gactccgtctgcgtcgtcacccagaagaaagtcccgg 294 |||||||||||||||||||| ||||||||||| |||| Sbjct: 4194388 gactccgtctgcgtcgtcacacagaagaaagtgccgg 4194352 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 122 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4194661 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 4194602 Query: 182 ccgcctctaccaagtcg 198 ||||||||||||||||| Sbjct: 4194601 ccgcctctaccaagtcg 4194585 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 373 cagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccgagttccgtaaaa 432 |||||||||| |||||||| |||| ||||||||| ||||| ||||| || |||||| | Sbjct: 4193562 cagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctgaattccgtttca 4193503 Query: 433 aatggggatatgagatgcctgtggatgtattagcaaaatgg 473 ||||||| || |||||||| || || ||||||||||||||| Sbjct: 4193502 aatggggctacgagatgcccgtagacgtattagcaaaatgg 4193462 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 472 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 531 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 4193348 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 4193289
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 198 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 257 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 94976 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 94917 Query: 258 gactccgtctgcgtcgtcacccagaagaaagtcccgg 294 |||||||||||||||||||| ||||||||||| |||| Sbjct: 94916 gactccgtctgcgtcgtcacacagaagaaagtgccgg 94880 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 122 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95189 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 95130 Query: 182 ccgcctctaccaagtcg 198 ||||||||||||||||| Sbjct: 95129 ccgcctctaccaagtcg 95113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 373 cagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccgagttccgtaaaa 432 |||||||||| |||||||| |||| ||||||||| ||||| ||||| || |||||| | Sbjct: 94090 cagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctgaattccgtttca 94031 Query: 433 aatggggatatgagatgcctgtggatgtattagcaaaatgg 473 ||||||| || |||||||| || || ||||||||||||||| Sbjct: 94030 aatggggctacgagatgcccgtagacgtattagcaaaatgg 93990 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 472 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 531 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 93876 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 93817
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 198 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 257 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 22954 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 22895 Query: 258 gactccgtctgcgtcgtcacccagaagaaagtcccgg 294 |||||||||||||||||||| ||||||||||| |||| Sbjct: 22894 gactccgtctgcgtcgtcacacagaagaaagtgccgg 22858 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 122 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23167 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 23108 Query: 182 ccgcctctaccaagtcg 198 ||||||||||||||||| Sbjct: 23107 ccgcctctaccaagtcg 23091 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 373 cagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccgagttccgtaaaa 432 |||||||||| |||||||| |||| ||||||||| ||||| ||||| || |||||| | Sbjct: 22068 cagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctgaattccgtttca 22009 Query: 433 aatggggatatgagatgcctgtggatgtattagcaaaatgg 473 ||||||| || |||||||| || || ||||||||||||||| Sbjct: 22008 aatggggctacgagatgcccgtagacgtattagcaaaatgg 21968 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 472 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 531 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 21854 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 21795
>gb|AF034572.1|AF034572 Glycine max proteasome IOTA subunit mRNA, complete cds Length = 994 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 399 caagcaagaaatgaagcagccgagttccgtaaaaaatggggatatgagatgcctgtggat 458 |||||||||||||||||||| ||||| || | || ||||||||||||||||| ||| Sbjct: 391 caagcaagaaatgaagcagctgagtttcgctttacatatggatatgagatgcctgtagat 450 Query: 459 gtattagcaaaatggattgcagacaaagcacaaatatacacgcagcatgcatacatgaga 518 |||||||| |||||||||||||| ||| ||||| | || || || ||||| || |||||| Sbjct: 451 gtattagctaaatggattgcagataaatcacaagtctatactcaacatgcttatatgaga 510 Query: 519 ccccttggtgtagttgctatggt 541 || || || |||||||||||||| Sbjct: 511 ccactcggagtagttgctatggt 533
>ref|XM_479149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1025 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 140 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 115 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 174 Query: 200 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 259 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 175 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 234 Query: 260 ctccgtctgcgtcgtcaccca 280 |||||||| |||| ||||||| Sbjct: 235 ctccgtctacgtcctcaccca 255
>ref|XM_507390.1| PREDICTED Oryza sativa (japonica cultivar-group), P0616D06.113 mRNA Length = 1040 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 140 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 108 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 167 Query: 200 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 259 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 168 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 227 Query: 260 ctccgtctgcgtcgtcaccca 280 |||||||| |||| ||||||| Sbjct: 228 ctccgtctacgtcctcaccca 248
>ref|XM_506462.2| PREDICTED Oryza sativa (japonica cultivar-group), P0616D06.113 mRNA Length = 1610 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 140 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 126 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 185 Query: 200 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 259 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 186 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 245 Query: 260 ctccgtctgcgtcgtcaccca 280 |||||||| |||| ||||||| Sbjct: 246 ctccgtctacgtcctcaccca 266
>dbj|AK102448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093O06, full insert sequence Length = 1609 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 140 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 126 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 185 Query: 200 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 259 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 186 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 245 Query: 260 ctccgtctgcgtcgtcaccca 280 |||||||| |||| ||||||| Sbjct: 246 ctccgtctacgtcctcaccca 266
>dbj|AK069145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007E07, full insert sequence Length = 1025 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 140 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 115 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 174 Query: 200 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 259 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 175 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 234 Query: 260 ctccgtctgcgtcgtcaccca 280 |||||||| |||| ||||||| Sbjct: 235 ctccgtctacgtcctcaccca 255
>dbj|AK058885.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C05, full insert sequence Length = 1040 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 140 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 108 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 167 Query: 200 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 259 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 168 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 227 Query: 260 ctccgtctgcgtcgtcaccca 280 |||||||| |||| ||||||| Sbjct: 228 ctccgtctacgtcctcaccca 248
>dbj|AB032062.1| Oryza sativa (japonica cultivar-group) OsPAA2 mRNA for alpha 1-2 subunit of 20S proteasome, complete cds Length = 1004 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 140 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 78 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 137 Query: 200 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 259 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 138 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 197 Query: 260 ctccgtctgcgtcgtcaccca 280 |||||||| |||| ||||||| Sbjct: 198 ctccgtctacgtcctcaccca 218
>ref|XM_421242.1| PREDICTED: Gallus gallus similar to Proteasome subunit alpha type 6 (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (LOC423326), mRNA Length = 1036 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 ||||||||| ||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 84 gcgccggcttcgaccgccacatcaccatcttttcgcccgagggccgcctctaccaagtcg 143 Query: 199 agta 202 |||| Sbjct: 144 agta 147
>emb|CR390124.1| Gallus gallus finished cDNA, clone ChEST163e7 Length = 956 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 ||||||||| ||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 85 gcgccggcttcgaccgccacatcaccatcttttcgcccgagggccgcctctaccaagtcg 144 Query: 199 agta 202 |||| Sbjct: 145 agta 148
>gb|DQ213268.1| Taeniopygia guttata clone 0061P0013H01 proteasome subunit alpha type 6-like mRNA, complete sequence Length = 977 Score = 89.7 bits (45), Expect = 9e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 ||||||||| |||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 91 gcgccggcttcgaccggcacatcaccatcttctcgcccgagggccgcctctaccaagtcg 150 Query: 199 a 199 | Sbjct: 151 a 151
>ref|NM_165567.1| Drosophila melanogaster CG30382-RA (CG30382), mRNA Length = 735 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 214 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 34 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 92
>ref|NM_165565.1| Drosophila melanogaster Proteasome 6 subunit CG18495-RA, transcript variant A (Prosalpha6), mRNA Length = 887 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 214 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 86 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 144
>ref|NM_080098.2| Drosophila melanogaster Proteasome 6 subunit CG18495-RB, transcript variant B (Prosalpha6), mRNA Length = 969 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 214 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 168 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 226
>gb|AY118637.1| Drosophila melanogaster SD02332 full insert cDNA Length = 971 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 214 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 138 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 196
>gb|AF144749.1|AF144749 Drosophila melanogaster 20S proteasome subunit alpha1 mRNA, complete cds Length = 888 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 214 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 100 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 158
>emb|Y16644.1|NTY16644 Nicotiana tabacum mRNA for proteasome A-type subunit Length = 1035 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 438 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 497 |||||||| ||||| ||||||||| | | ||||||||||||||||| | || | ||| Sbjct: 384 ggatatgaaatgccagtggatgtactgtctaaatggattgcagacaagtctcaggtttac 443 Query: 498 acgcagcatgcatacatgagaccccttggtgtagttgctatg 539 || |||||||| || |||||||||||||| |||||||||||| Sbjct: 444 acacagcatgcctatatgagaccccttggagtagttgctatg 485 Score = 67.9 bits (34), Expect = 3e-08 Identities = 133/166 (80%) Strand = Plus / Plus Query: 143 cggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagta 202 ||||||||| || ||||| || |||||||| || || || || |||| |||||||| || Sbjct: 89 cggctacgatcgtcacattacgatcttctctcccgaaggtcgtctctttcaagtcgaata 148 Query: 203 cgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaaggactc 262 ||||| ||||| || ||| |||| || | ||||| || |||||||| || |||||||| Sbjct: 149 tgcgtttaaggctgtgaaggcggccggaattacctctattggcgtccgtggaaaggactc 208 Query: 263 cgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 308 ||| || || || || |||||||||||||| |||||| | |||||| Sbjct: 209 cgtttgtgttgttactcagaagaaagtccctgacaagctattggat 254
>ref|NM_126597.2| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine endopeptidase AT2G05840 (PAA2) transcript variant AT2G05840.1 mRNA, complete cds Length = 1093 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 138 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 197 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 132 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 191 Query: 198 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 257 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 192 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 251 Query: 258 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 308 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 252 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 302 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 495 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 541 ||||| || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 489 tacacacaacatgcttacatgagaccccttggagtagttgccatggt 535
>ref|NM_001036263.1| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine endopeptidase AT2G05840 (PAA2) transcript variant AT2G05840.2 mRNA, complete cds Length = 1114 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 138 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 197 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 150 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 209 Query: 198 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 257 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 210 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 269 Query: 258 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 308 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 270 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 320 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 495 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 541 ||||| || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 507 tacacacaacatgcttacatgagaccccttggagtagttgccatggt 553
>gb|AY143829.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds Length = 741 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 138 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 197 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 16 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 75 Query: 198 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 257 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 76 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 135 Query: 258 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 308 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 136 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 186 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 495 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 541 ||||| || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 373 tacacacaacatgcttacatgagaccccttggagtagttgccatggt 419
>ref|XM_963562.1| PREDICTED: Tribolium castaneum similar to proteasome (prosome, macropain) subunit, alpha type 6 (LOC657082), mRNA Length = 815 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 149 cgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgtt 208 |||||||||||| ||||| |||||||| ||||| || ||||||||||||||||| || || Sbjct: 27 cgaccgccacattaccattttctcccccgaggggcggctctaccaagtcgagtatgcctt 86 Query: 209 caa 211 ||| Sbjct: 87 caa 89
>gb|AY052679.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds Length = 1014 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 138 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 197 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 75 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 134 Query: 198 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 257 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 135 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 194 Query: 258 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 308 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 195 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 245 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 495 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 541 ||||| || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 432 tacacacaacatgcttacatgagaccccttggagtagttgccatggt 478
>gb|AF043519.1|AF043519 Arabidopsis thaliana 20S proteasome subunit PAA2 (PAA2) mRNA, complete cds Length = 1113 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 138 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 197 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 132 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 191 Query: 198 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 257 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 192 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 251 Query: 258 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 308 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 252 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 302 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 495 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 541 ||||| || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 489 tacacacaacatgcttacatgagaccccttggagtagttgccatggt 535
>emb|CR733852.2|CNS0GT0R Tetraodon nigroviridis full-length cDNA Length = 1005 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 184 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 233
>emb|CR723142.2|CNS0GKX8 Tetraodon nigroviridis full-length cDNA Length = 990 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 171 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 220
>emb|CR707063.2|CNS0G8IR Tetraodon nigroviridis full-length cDNA Length = 996 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 181 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 230
>emb|CR695416.2|CNS0FZJ8 Tetraodon nigroviridis full-length cDNA Length = 1003 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 174 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 223
>emb|CR664013.2|CNS0FBBN Tetraodon nigroviridis full-length cDNA Length = 974 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 145 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 194
>emb|CR663453.2|CNS0FAW3 Tetraodon nigroviridis full-length cDNA Length = 994 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 170 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 219
>emb|CR653857.2|CNS0F3HJ Tetraodon nigroviridis full-length cDNA Length = 998 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 169 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 218
>gb|AY231750.1| Drosophila yakuba clone yak-em_Prosalpha6 mRNA sequence Length = 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 214 ||||| || |||||||| |||||||| |||||||||||||| |||||||| || ||||| Sbjct: 34 cacattacaatcttctctccggagggacgcctctaccaagtggagtacgcctttaaggc 92
>gb|AC146756.17| Medicago truncatula clone mth2-15l17, complete sequence Length = 120437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 399 caagcaagaaatgaagcagccgagttccgtaaaaaatggggatatgagatgcctgtggat 458 |||||||||||||||||||| ||||| || | |||| |||||||||||||| |||||| Sbjct: 46358 caagcaagaaatgaagcagctgagtttcgccataaatttggatatgagatgccggtggat 46299 Query: 459 gtattagcaaaatgg 473 || || || |||||| Sbjct: 46298 gtgttggctaaatgg 46284
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 140 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaa 194 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 25240037 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaa 25239983 Score = 40.1 bits (20), Expect = 7.9 Identities = 65/80 (81%) Strand = Plus / Minus Query: 201 tacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaaggac 260 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | ||| Sbjct: 25239841 tacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacgac 25239782 Query: 261 tccgtctgcgtcgtcaccca 280 ||||||| |||| ||||||| Sbjct: 25239781 tccgtctacgtcctcaccca 25239762
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 140 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaa 194 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 56708 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaa 56654 Score = 40.1 bits (20), Expect = 7.9 Identities = 65/80 (81%) Strand = Plus / Minus Query: 201 tacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaaggac 260 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | ||| Sbjct: 56512 tacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacgac 56453 Query: 261 tccgtctgcgtcgtcaccca 280 ||||||| |||| ||||||| Sbjct: 56452 tccgtctacgtcctcaccca 56433
>gb|BC072719.1| Danio rerio proteasome (prosome, macropain) subunit, alpha type, 6b, mRNA (cDNA clone MGC:91778 IMAGE:7039953), complete cds Length = 1350 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 209 ||||| |||||||||||||||||||| ||||| ||| | || |||||||| || ||||| Sbjct: 96 gaccgacacatcaccatcttctcccccgagggacgcttatatcaagtcgaatatgcgttt 155 Query: 210 aaggc 214 ||||| Sbjct: 156 aaggc 160
>gb|AF354751.1| Danio rerio proteasome subunit alpha Type 6-B (psma6b) mRNA, complete cds Length = 1191 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 209 ||||| |||||||||||||||||||| ||||| ||| | || |||||||| || ||||| Sbjct: 331 gaccgacacatcaccatcttctcccccgagggacgcttatatcaagtcgaatatgcgttt 390 Query: 210 aaggc 214 ||||| Sbjct: 391 aaggc 395
>gb|BT014031.1| Lycopersicon esculentum clone 133094R, mRNA sequence Length = 1053 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 495 tacacgcagcatgcatacatgagaccccttggtgtagttgctatg 539 ||||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 450 tacacacagcatgcctatatgagaccccttggagtagttgctatg 494
>ref|XM_757288.1| Ustilago maydis 521 hypothetical protein (UM06234.1) partial mRNA Length = 918 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 160 tcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcggtca 219 ||||||||||||||||||| || || || ||||| |||||||| || ||||||||| ||| Sbjct: 29 tcaccatcttctccccggacggacggctgtaccaggtcgagtatgccttcaaggcgatca 88 Query: 220 a 220 | Sbjct: 89 a 89
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 20870353 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 20870412 Query: 205 c 205 | Sbjct: 20870413 c 20870413
>gb|AC007301.8|AC007301 Drosophila melanogaster, chromosome 2R, region 43E12-44F1, BAC clone BACR04B09, complete sequence Length = 174707 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagt 196 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 43240 cacatcacgatcttctctccggagggacgcctctaccaagt 43280 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagt 196 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 40130 cacatcacgatcttctctccggagggacgcctctaccaagt 40170
>ref|NM_131795.2| Danio rerio proteasome (prosome, macropain) subunit, alpha type, 6b (psma6b), mRNA Length = 1350 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 209 ||||| |||||||||||||||||||| ||||| ||| | || |||||||| || ||||| Sbjct: 96 gaccgacacatcaccatcttctcccccgagggacgcttatatcaagtcgaatatgcgttt 155 Query: 210 aaggc 214 ||||| Sbjct: 156 aaggc 160
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 62579 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 62638 Query: 205 c 205 | Sbjct: 62639 c 62639
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 145382 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 145441 Query: 205 c 205 | Sbjct: 145442 c 145442
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete sequence Length = 254177 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagt 196 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 43113 cacatcacgatcttctctccggagggacgcctctaccaagt 43073 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagt 196 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 40003 cacatcacgatcttctctccggagggacgcctctaccaagt 39963
>dbj|AB032061.1| Oryza sativa (japonica cultivar-group) OsPAD1 mRNA for alpha 4 subunit of 20S proteasome, complete cds Length = 1007 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 50 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 109 Query: 205 c 205 | Sbjct: 110 c 110
>emb|BX072129.1|CNS09RTH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC9DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 901 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 |||| |||| ||| ||||| || || ||||| || ||||| ||||||||||||||||| | Sbjct: 840 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgcctctaccaagttg 781 Query: 199 agtacgcgttcaaggc 214 |||| || |||||||| Sbjct: 780 agtatgccttcaaggc 765
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 162 accatcttctccccggagggccgcctctaccaagtcgagtacgc 205 ||||||||||||||||| || |||||||| || ||||||||||| Sbjct: 1579176 accatcttctccccggacggacgcctctatcaggtcgagtacgc 1579133 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 146 ctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgc 205 |||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 1050899 ctacgaccgcgggatcactatcttctcgccggacggacgcctctaccaggtcgagtacgc 1050840
>ref|NM_011968.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 6 (Psma6), mRNA Length = 945 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 196 ||||||||||| || |||||||| || |||||||| ||||||||||| Sbjct: 61 gaccgccacattactatcttctctcccgagggccgactctaccaagt 107
>ref|XM_501500.1| Yarrowia lipolytica CLIB122, YALI0C06039g predicted mRNA Length = 735 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 153 cgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaa 211 |||||||| |||||||| || || |||||||| || ||||| ||||||||||| ||||| Sbjct: 25 cgccacattaccatcttttcgcctgagggccgactgtaccaggtcgagtacgccttcaa 83
>gb|U60288.1|MMU60288 Mus musculus proteasome subunit iota mRNA, complete cds Length = 945 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 196 ||||||||||| || |||||||| || |||||||| ||||||||||| Sbjct: 61 gaccgccacattactatcttctctcccgagggccgactctaccaagt 107
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 153 cgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaa 211 |||||||| |||||||| || || |||||||| || ||||| ||||||||||| ||||| Sbjct: 777476 cgccacattaccatcttttcgcctgagggccgactgtaccaggtcgagtacgccttcaa 777418
>ref|XM_514761.1| PREDICTED: Pan troglodytes similar to Proteasome subunit alpha type 7 (Proteasome subunit RC6-1) (LOC458383), mRNA Length = 920 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 130 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 189 Query: 205 cg 206 || Sbjct: 190 cg 191
>gb|BC004427.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7, transcript variant 1, mRNA (cDNA clone MGC:3755 IMAGE:2819923), complete cds Length = 967 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 78 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 137 Query: 205 cg 206 || Sbjct: 138 cg 139
>gb|BC008222.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 7, mRNA (cDNA clone MGC:6440 IMAGE:2581897), complete cds Length = 892 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 29 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 88 Query: 205 cg 206 || Sbjct: 89 cg 90
>ref|XM_956973.1| Neurospora crassa OR74A hypothetical protein (NCU05295.1) partial mRNA Length = 738 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 158 catcaccatcttctccccggagggccgcctctaccaagtcgagtac 203 ||||| || ||||||||| || |||||||||| ||||||||||||| Sbjct: 33 catcaacaccttctcccccgaaggccgcctcttccaagtcgagtac 78
>ref|XM_324651.1| Neurospora crassa OR74A hypothetical protein (NCU05295.1) partial mRNA Length = 738 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 158 catcaccatcttctccccggagggccgcctctaccaagtcgagtac 203 ||||| || ||||||||| || |||||||||| ||||||||||||| Sbjct: 33 catcaacaccttctcccccgaaggccgcctcttccaagtcgagtac 78
>ref|NM_001008217.1| Rattus norvegicus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA Length = 908 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 68 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 127 Query: 205 cg 206 || Sbjct: 128 cg 129
>ref|NM_011969.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA Length = 881 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 34 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 93 Query: 205 cg 206 || Sbjct: 94 cg 95
>gb|BC014999.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7, mRNA (cDNA clone IMAGE:4851079), containing frame-shift errors Length = 798 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 88 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 147 Query: 205 cg 206 || Sbjct: 148 cg 149
>emb|CR731238.2|CNS0GR63 Tetraodon nigroviridis full-length cDNA Length = 975 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| || |||||||| || |||||||||| |||||||||||||||||| Sbjct: 158 gaccgacatatcaccatattttccccggagg-ccgcctctaccaagtcga 206
>emb|CR640479.2|CNS0ET5X Tetraodon nigroviridis full-length cDNA Length = 1015 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| || |||||||| || |||||||||| |||||||||||||||||| Sbjct: 184 gaccgacatatcaccatattttccccggagg-ccgcctctaccaagtcga 232
>emb|AL078633.32|HS1005F21 Human DNA sequence from clone RP5-1005F21 on chromosome 20 Contains the PSMA7 gene for proteasome (prosome, macropain) subunit alpha type 7, the HRH3 gene for histamine receptor H3, the SS18L1 gene for synovial sarcoma translocation gene on chromosome 18-like 1, the GTPBP5 gene for GTP binding protein 5 (putative), the 3' end of the C20orf40 gene for a novel protein similar to Pleurodeles waltlii RAP55 protein and seven CpG islands, complete sequence Length = 100976 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 92377 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 92436 Query: 205 cg 206 || Sbjct: 92437 cg 92438
>gb|BT007466.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 mRNA, partial cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 205 cg 206 || Sbjct: 65 cg 66
>gb|BT007165.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 mRNA, complete cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 205 cg 206 || Sbjct: 65 cg 66
>emb|CR857931.1| Pongo pygmaeus mRNA; cDNA DKFZp469N104 (from clone DKFZp469N104) Length = 1056 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 58 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 117 Query: 205 cg 206 || Sbjct: 118 cg 119
>emb|CR615593.1| full-length cDNA clone CS0DI074YF03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 900 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 36 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 95 Query: 205 cg 206 || Sbjct: 96 cg 97
>emb|CR624293.1| full-length cDNA clone CS0DF011YJ24 of Fetal brain of Homo sapiens (human) Length = 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 54 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 113 Query: 205 cg 206 || Sbjct: 114 cg 115
>emb|CR622362.1| full-length cDNA clone CS0DM009YO06 of Fetal liver of Homo sapiens (human) Length = 889 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 115 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 174 Query: 205 cg 206 || Sbjct: 175 cg 176
>emb|CR618955.1| full-length cDNA clone CS0DB003YC01 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 926 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 115 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 174 Query: 205 cg 206 || Sbjct: 175 cg 176
>emb|CR616396.1| full-length cDNA clone CS0DC027YF09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 953 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 87 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 146 Query: 205 cg 206 || Sbjct: 147 cg 148
>emb|CR611945.1| full-length cDNA clone CS0DK003YA15 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 973 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 140 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 199 Query: 205 cg 206 || Sbjct: 200 cg 201
>emb|CR603718.1| full-length cDNA clone CS0DI042YM18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 953 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 87 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 146 Query: 205 cg 206 || Sbjct: 147 cg 148
>emb|CR600945.1| full-length cDNA clone CS0DC026YF03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1023 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 142 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 201 Query: 205 cg 206 || Sbjct: 202 cg 203
>emb|CR600734.1| full-length cDNA clone CS0DC018YO10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 984 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 119 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 178 Query: 205 cg 206 || Sbjct: 179 cg 180
>emb|CR596694.1| full-length cDNA clone CS0DI011YL02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 815 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 104 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 163 Query: 205 cg 206 || Sbjct: 164 cg 165
>dbj|AK146765.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920051K20 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 900 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 53 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 112 Query: 205 cg 206 || Sbjct: 113 cg 114
>dbj|AK165563.1| Mus musculus B cells CRL-1669 BCL1 Clone 13.20-3B3 cDNA, RIKEN full-length enriched library, clone:G430008L02 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 896 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 49 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 108 Query: 205 cg 206 || Sbjct: 109 cg 110
>dbj|AK168234.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730069P12 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 914 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 66 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 125 Query: 205 cg 206 || Sbjct: 126 cg 127
>dbj|AK088615.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021K02 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 888 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 41 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 100 Query: 205 cg 206 || Sbjct: 101 cg 102
>gb|BC001895.1|BC001895 Homo sapiens, Similar to proteasome (prosome, macropain) subunit, alpha type, 7, clone IMAGE:3535769, mRNA Length = 805 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 93 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 152 Query: 205 cg 206 || Sbjct: 153 cg 154
>ref|NM_002792.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 (PSMA7), mRNA Length = 984 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 120 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 179 Query: 205 cg 206 || Sbjct: 180 cg 181
>gb|AF054185.1|AF054185 Homo sapiens proteasome subunit HSPC mRNA, complete cds Length = 969 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 90 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 149 Query: 205 cg 206 || Sbjct: 150 cg 151
>gb|BC014752.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 7, mRNA (cDNA clone IMAGE:4218885), with apparent retained intron Length = 1572 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 27 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 86 Query: 205 cg 206 || Sbjct: 87 cg 88
>ref|XM_579184.1| PREDICTED: Rattus norvegicus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA Length = 908 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 68 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 127 Query: 205 cg 206 || Sbjct: 128 cg 129
>gb|AY892046.1| Synthetic construct Homo sapiens clone FLH024047.01L proteasome subunit alpha type 7 (PSMA7) mRNA, partial cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 205 cg 206 || Sbjct: 65 cg 66
>gb|AY892045.1| Synthetic construct Homo sapiens clone FLH024046.01L proteasome subunit alpha type 7 (PSMA7) mRNA, partial cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 205 cg 206 || Sbjct: 65 cg 66
>gb|AY889591.1| Synthetic construct Homo sapiens clone FLH024051.01X proteasome subunit alpha type 7 (PSMA7) mRNA, complete cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 205 cg 206 || Sbjct: 65 cg 66
>gb|AF019662.1|AF019662 Mus musculus C6-I proteasome chain mRNA, complete cds Length = 881 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 34 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 93 Query: 205 cg 206 || Sbjct: 94 cg 95
>gb|AF022815.1|AF022815 Homo sapiens proteasome subunit XAPC7 mRNA, complete cds Length = 893 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 29 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 88 Query: 205 cg 206 || Sbjct: 89 cg 90
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete sequence Length = 193057 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 163243 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 163184 Query: 205 cg 206 || Sbjct: 163183 cg 163182
>dbj|D30804.1|RATPSRC6I Rat mRNA for proteasome subunit RC6-1, complete cds Length = 900 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 42 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 101 Query: 205 cg 206 || Sbjct: 102 cg 103
>ref|NM_122950.2| Arabidopsis thaliana PAA1; endopeptidase/ peptidase/ threonine endopeptidase AT5G35590 (PAA1) mRNA, complete cds Length = 1037 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 438 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 497 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 365 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 424 Query: 498 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 557 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 425 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 484 Query: 558 gagaa 562 ||||| Sbjct: 485 gagaa 489 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 267 tgcgtcgtcacccagaagaaagtcccggacaagttgttggat 308 |||||||| |||||||||||||| || |||||| | |||||| Sbjct: 194 tgcgtcgttacccagaagaaagttcctgacaagcttttggat 235
>gb|AY440091.1| Armigeres subalbatus ASAP ID: 39029 proteasome complex subunit mRNA sequence Length = 721 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 209 ||||||||||| || || ||||| |||||||| || ||||| ||||| ||||| || ||| Sbjct: 138 gaccgccacattacgattttctctccggagggtcgtctctatcaagttgagtatgccttc 197 Query: 210 aaggc 214 ||||| Sbjct: 198 aaggc 202
>gb|BC055520.1| Danio rerio cDNA clone MGC:66161 IMAGE:5600170, complete cds Length = 998 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 209 ||||| |||||||||||||| || |||||||| | ||||| |||||||| || || ||| Sbjct: 94 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcgaatatgctttc 153 Query: 210 aaggc 214 ||||| Sbjct: 154 aaggc 158
>emb|Y13691.1|ATY13691 Arabidopsis thaliana mRNA for proteasome subunit prc1 Length = 976 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 438 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 497 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 313 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 372 Query: 498 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 557 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 373 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 432 Query: 558 gagaa 562 ||||| Sbjct: 433 gagaa 437 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 267 tgcgtcgtcacccagaagaaagtcccggacaagttgttggat 308 |||||||| |||||||||||||| || |||||| | |||||| Sbjct: 142 tgcgtcgttacccagaagaaagttcctgacaagcttttggat 183
>gb|AY114564.1| Arabidopsis thaliana multicatalytic endopeptidase complex alpha subunit-like (At5g35590) mRNA, complete cds Length = 777 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 438 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 497 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 316 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 375 Query: 498 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 557 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 376 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 435 Query: 558 gagaa 562 ||||| Sbjct: 436 gagaa 440
>gb|AY092969.1| Arabidopsis thaliana multicatalytic endopeptidase complex alpha subunit-like (At5g35590) mRNA, complete cds Length = 1008 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 438 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 497 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 365 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 424 Query: 498 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 557 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 425 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 484 Query: 558 gagaa 562 ||||| Sbjct: 485 gagaa 489
>gb|AF354750.1|AF354750 Danio rerio proteasome subunit alpha Type 6-A (psma6a) mRNA, complete cds Length = 896 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 209 ||||| |||||||||||||| || |||||||| | ||||| |||||||| || || ||| Sbjct: 28 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcgaatatgctttc 87 Query: 210 aaggc 214 ||||| Sbjct: 88 aaggc 92
>ref|NM_153655.1| Danio rerio proteasome (prosome, macropain) subunit, alpha type, 6a (psma6a), mRNA Length = 896 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 209 ||||| |||||||||||||| || |||||||| | ||||| |||||||| || || ||| Sbjct: 28 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcgaatatgctttc 87 Query: 210 aaggc 214 ||||| Sbjct: 88 aaggc 92
>gb|AF043518.1|AF043518 Arabidopsis thaliana 20S proteasome subunit PAA1 (PAA1) mRNA, complete cds Length = 1029 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 438 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 497 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 370 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtttac 429 Query: 498 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 557 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 430 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 489 Query: 558 gagaa 562 ||||| Sbjct: 490 gagaa 494 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 267 tgcgtcgtcacccagaagaaagtcccggacaagttgttggat 308 |||||||| |||||||||||||| || |||||| | |||||| Sbjct: 199 tgcgtcgttacccagaagaaagttcctgacaagcttttggat 240
>emb|BX067162.1|CNS09NZI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC50CH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 905 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Minus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 865 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 806 Query: 199 agtacgcgttcaaggc 214 |||| || |||||||| Sbjct: 805 agtatgccttcaaggc 790
>emb|BX052051.1|CNS09CBR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC29DH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 767 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Minus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 739 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 680 Query: 199 agtacgcgttcaaggc 214 |||| || |||||||| Sbjct: 679 agtatgccttcaaggc 664
>emb|BX046179.1|CNS097SN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC2CH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 929 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Minus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 864 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 805 Query: 199 agtacgcgttcaaggc 214 |||| || |||||||| Sbjct: 804 agtatgccttcaaggc 789
>emb|BX043736.1|CNS095WS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC16CB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 927 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Minus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 809 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 750 Query: 199 agtacgcgttcaaggc 214 |||| || |||||||| Sbjct: 749 agtatgccttcaaggc 734
>emb|BX032519.1|CNS08X97 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA48BG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 868 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Plus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 153 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 212 Query: 199 agtacgcgttcaaggc 214 |||| || |||||||| Sbjct: 213 agtatgccttcaaggc 228
>gb|AC084541.1|CBRG27D19 Caenorhabditis briggsae cosmid G27D19, complete sequence Length = 40961 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccgga 178 ||||||| | ||| || ||||||||||||||||||||||| Sbjct: 35517 gcgccggattcgatcgtcacatcaccatcttctccccgga 35556
>ref|XM_318387.2| Anopheles gambiae str. PEST ENSANGP00000015960 (ENSANGG00000013471), mRNA Length = 1017 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Plus Query: 139 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 159 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 218 Query: 199 agtacgcgttcaaggc 214 |||| || |||||||| Sbjct: 219 agtatgccttcaaggc 234
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 159 atcaccatcttctccccggagggccgcctctaccaagtcgagtacgcg 206 |||||||||||||| ||||| || ||||| || || |||||||||||| Sbjct: 1804305 atcaccatcttctctccggacggtcgcctgtatcaggtcgagtacgcg 1804352
>ref|XM_368091.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01153.4) partial mRNA Length = 765 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 147 tacgaccgccacatcaccatcttctcc 173 |||||||| |||||||||||||||||| Sbjct: 19 tacgaccggcacatcaccatcttctcc 45
>emb|CR730790.2|CNS0GQTN Tetraodon nigroviridis full-length cDNA Length = 1232 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/50 (88%), Gaps = 2/50 (4%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 199 ||||| || |||||||| || ||||||||| |||||||||||||||||| Sbjct: 28 gaccgacatatcaccatattttccccggag--ccgcctctaccaagtcga 75
>gb|AY232148.1| Drosophila yakuba clone yak-ad_ProsMA5 mRNA sequence Length = 555 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 167 cttctccccggagggccgcctctaccaagtcgagtacgc 205 |||||| |||||||||||||||| |||||| || ||||| Sbjct: 42 cttctcgccggagggccgcctcttccaagtggaatacgc 80
>emb|BX036097.1|CNS0900L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7DB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 960 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 144 ggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtac 203 |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 863 ggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttgagtat 804 Query: 204 gcgttcaaggc 214 || |||||||| Sbjct: 803 gccttcaaggc 793
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Plus Query: 232 tcacctcgatcggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcc 291 |||| |||||||| |||||||| || || || || |||||||| || ||||||||||| | Sbjct: 18330 tcacatcgatcggtgtccgagggaaagattcagtatgcgtcgttacgcagaagaaagttc 18389 Query: 292 cgg 294 ||| Sbjct: 18390 cgg 18392 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 495 tacacgcagcatgcatacatgagaccccttggtgtag 531 ||||| || ||||| ||||||||||||||||| |||| Sbjct: 18813 tacacacaacatgcttacatgagaccccttggagtag 18849
>dbj|AK152915.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830091A01 product:proteasome (prosome, macropain) subunit, alpha type 6, full insert sequence Length = 946 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 196 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 78 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 124
>dbj|AK161662.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730455O07 product:proteasome (prosome, macropain) subunit, alpha type 6, full insert sequence Length = 928 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 196 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 58 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 104
>dbj|AK088143.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005A01 product:proteasome (prosome, macropain) subunit, alpha type 6, full insert sequence Length = 925 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 196 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 57 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 103
>gb|AF060087.1|AF060087 Mus musculus proteasome subunit iota (Psma6) mRNA, complete cds Length = 741 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 196 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 28 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 74
>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence Length = 184821 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 196 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 53573 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 53527
>ref|NM_114913.3| Arabidopsis thaliana CRK; ATP binding / calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase/ protein kinase/ protei> AT3G50530 (CRK) mRNA, complete cds Length = 2384 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ctccggcgagatctccggcgac 114 |||||||||||||||||||||| Sbjct: 507 ctccggcgagatctccggcgac 528
>gb|DQ215433.1| Taeniopygia guttata clone 0058P0005A09 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 933 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 34 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 93 Query: 205 cg 206 || Sbjct: 94 cg 95
>gb|DQ215432.1| Taeniopygia guttata clone 0058P0015B06 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 768 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 55 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 114 Query: 205 cg 206 || Sbjct: 115 cg 116
>gb|DQ215431.1| Taeniopygia guttata clone 0058P0056A11 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 774 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 48 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 107 Query: 205 cg 206 || Sbjct: 108 cg 109
>gb|DQ215430.1| Taeniopygia guttata clone 0058P0018G09 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 774 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 61 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 120 Query: 205 cg 206 || Sbjct: 121 cg 122
>gb|DQ215302.1| Taeniopygia guttata clone 0058P0014F03 beta-globin mRNA-like mRNA, complete sequence Length = 616 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 13 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 72 Query: 205 cg 206 || Sbjct: 73 cg 74
>gb|AY562224.1| Nicotiana tabacum calcium/calmodulin protein kinase gene, complete cds Length = 24561 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ctccggcgagatctccggcgac 114 |||||||||||||||||||||| Sbjct: 9902 ctccggcgagatctccggcgac 9923
>gb|AF550608.1| Nicotiana tabacum calcium/calmodulin protein kinase 1 mRNA, complete cds Length = 4846 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ctccggcgagatctccggcgac 114 |||||||||||||||||||||| Sbjct: 1643 ctccggcgagatctccggcgac 1664
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 cttgcttgccaccggcctcaca 374 |||||||||||||||||||||| Sbjct: 223306 cttgcttgccaccggcctcaca 223327
>emb|Y09418.1|ATCRK A.thaliana mRNA for CDPK-related protein kinase Length = 2267 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ctccggcgagatctccggcgac 114 |||||||||||||||||||||| Sbjct: 375 ctccggcgagatctccggcgac 396
>emb|X89429.1|PADNAGRIS Podospora anserina grisea gene, wild-type and copy of a long-lived mutant Length = 3417 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 311 caccagcatcacgcacctcttc 332 |||||||||||||||||||||| Sbjct: 1706 caccagcatcacgcacctcttc 1727
>emb|AL133363.1|ATT20E23 Arabidopsis thaliana DNA chromosome 3, BAC clone T20E23 Length = 83513 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ctccggcgagatctccggcgac 114 |||||||||||||||||||||| Sbjct: 44004 ctccggcgagatctccggcgac 44025
>gb|DQ397847.1| Cenarchaeum symbiosum clone C07F03, complete sequence Length = 42905 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 ccccggagggccgcctctacca 193 |||||||||||||||||||||| Sbjct: 20858 ccccggagggccgcctctacca 20879
>ref|NM_166221.2| Drosophila melanogaster Proteasome subunit CG10938-RA, transcript variant A (ProsMA5), mRNA Length = 884 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 167 cttctccccggagggccgcctctaccaagt 196 |||||| |||||||||||||||| |||||| Sbjct: 118 cttctcgccggagggccgcctcttccaagt 147
>ref|NM_057854.3| Drosophila melanogaster Proteasome subunit CG10938-RB, transcript variant B (ProsMA5), mRNA Length = 885 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 167 cttctccccggagggccgcctctaccaagt 196 |||||| |||||||||||||||| |||||| Sbjct: 114 cttctcgccggagggccgcctcttccaagt 143
>gb|AF435446.1|AF435446 Arabidopsis thaliana calcium/calmodulin-dependent protein kinase CaMK1 mRNA, complete cds Length = 2271 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ctccggcgagatctccggcgac 114 |||||||||||||||||||||| Sbjct: 440 ctccggcgagatctccggcgac 461
>gb|AY061404.1| Drosophila melanogaster LD33318 full length cDNA Length = 888 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 167 cttctccccggagggccgcctctaccaagt 196 |||||| |||||||||||||||| |||||| Sbjct: 109 cttctcgccggagggccgcctcttccaagt 138
>gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54B-54B, BAC clone BACR28O12, complete sequence Length = 161244 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 167 cttctccccggagggccgcctctaccaagt 196 |||||| |||||||||||||||| |||||| Sbjct: 127442 cttctcgccggagggccgcctcttccaagt 127471
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 167 cttctccccggagggccgcctctaccaagt 196 |||||| |||||||||||||||| |||||| Sbjct: 4443 cttctcgccggagggccgcctcttccaagt 4472
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 167 cttctccccggagggccgcctctaccaagt 196 |||||| |||||||||||||||| |||||| Sbjct: 147460 cttctcgccggagggccgcctcttccaagt 147489
>gb|U64721.1|DMU64721 Drosophila melanogaster 20S proteasome alpha subunit PSMA5 gene, complete cds Length = 1062 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 167 cttctccccggagggccgcctctaccaagt 196 |||||| |||||||||||||||| |||||| Sbjct: 187 cttctcgccggagggccgcctcttccaagt 216
>gb|BC061438.1| Xenopus tropicalis proteasome (prosome, macropain) subunit, alpha type 6, mRNA (cDNA clone MGC:76321 IMAGE:5380309), complete cds Length = 929 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcg 215 ||||| ||||||||||| || || || || ||||| |||||||| || || ||||||||| Sbjct: 54 cacattaccatcttctcacccgaagggcgtctctatcaagtcgaatatgcattcaaggcg 113 Query: 216 gtcaa 220 |||| Sbjct: 114 atcaa 118
>emb|Z73908.1|CEF53B2 Caenorhabditis elegans Cosmid F53B2, complete sequence Length = 33478 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 attgcagacaaagcacaaata 494 ||||||||||||||||||||| Sbjct: 18174 attgcagacaaagcacaaata 18194
>emb|BX649530.13| Zebrafish DNA sequence from clone DKEYP-33B5 in linkage group 17, complete sequence Length = 150656 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 150 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 198 ||||| |||||||||||||| || |||||||| | ||||| ||||||| Sbjct: 42431 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcg 42479
>ref|NM_069999.2| Caenorhabditis elegans F53B2.5 (F53B2.5) mRNA, complete cds Length = 1347 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 attgcagacaaagcacaaata 494 ||||||||||||||||||||| Sbjct: 536 attgcagacaaagcacaaata 516
>ref|NM_203782.1| Xenopus tropicalis proteasome (prosome, macropain) subunit, alpha type 6 (MGC76321), mRNA Length = 929 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcg 215 ||||| ||||||||||| || || || || ||||| |||||||| || || ||||||||| Sbjct: 54 cacattaccatcttctcacccgaagggcgtctctatcaagtcgaatatgcattcaaggcg 113 Query: 216 gtcaa 220 |||| Sbjct: 114 atcaa 118
>gb|AY103887.1| Zea mays PCO095017 mRNA sequence Length = 1119 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Plus Query: 145 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 204 ||||||||||| ||||||| | |||||||| || |||| ||||| ||| || ||||||| Sbjct: 119 gctacgaccgcgccatcaccgttttctcccccgacggccacctcttccaggtggagtacg 178 Query: 205 c 205 | Sbjct: 179 c 179
>emb|CR761245.2| Xenopus tropicalis finished cDNA, clone TEgg062p03 Length = 897 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 156 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcg 215 ||||| ||||||||||| || || || || ||||| |||||||| || || ||||||||| Sbjct: 47 cacattaccatcttctcacccgaagggcgtctctatcaagtcgaatatgcattcaaggcg 106 Query: 216 gtcaa 220 |||| Sbjct: 107 atcaa 111
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 tgtagttgctatggtcctgg 546 |||||||||||||||||||| Sbjct: 70434 tgtagttgctatggtcctgg 70415
>gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chromosome 1, complete sequence Length = 185717 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 agacaaagcacaaatataca 498 |||||||||||||||||||| Sbjct: 77154 agacaaagcacaaatataca 77135
>gb|AC131103.4| Mus musculus BAC clone RP23-213K14 from chromosome 19, complete sequence Length = 210370 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 553 atgaggagaaaatgctcagctctt 576 |||||||||||||||| ||||||| Sbjct: 147821 atgaggagaaaatgctaagctctt 147798
>gb|AC114549.9| Mus musculus chromosome 19, clone RP24-216P17, complete sequence Length = 200425 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 553 atgaggagaaaatgctcagctctt 576 |||||||||||||||| ||||||| Sbjct: 70055 atgaggagaaaatgctaagctctt 70032
>emb|AL355810.10| Human DNA sequence from clone RP11-40E6 on chromosome 13, complete sequence Length = 103749 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 agaaaatgctcagctcttca 578 |||||||||||||||||||| Sbjct: 96291 agaaaatgctcagctcttca 96310
>emb|AL137789.11| Human DNA sequence from clone RP11-57I17 on chromosome 1q32.1-32.3 Contains the 3' end of the CR1 gene for complement component (3b/4b) receptor 1, including Knops blood group system, a membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) (MCP) pseudogene and the 5' end of the CR1L gene for complement component (3b/4b) receptor 1-like, complete sequence Length = 145325 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 agacaaagcacaaatataca 498 |||||||||||||||||||| Sbjct: 4663 agacaaagcacaaatataca 4644
>emb|BX072128.1|CNS09RTG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC9DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 955 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 183 cgcctctaccaagtcgagtacgcgttcaaggc 214 |||||||||||||| ||||| || |||||||| Sbjct: 188 cgcctctaccaagttgagtatgccttcaaggc 219
>emb|Z72548.1|SCYGL026C S.cerevisiae chromosome VII reading frame ORF YGL026c Length = 2620 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 tggtctcccaagcaagaaatgaag 414 ||||||||||||| |||||||||| Sbjct: 2139 tggtctcccaagctagaaatgaag 2116
>emb|V01343.1|SCTRP5B Part of the yeast gene for tryptophan synthetase. A copy of the insertion element IS2 is inserted after cloning in E.coli by duplicating a 5 base pair sequence. This is the wildtype TRP5 gene before insertion of IS2 Length = 798 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 tggtctcccaagcaagaaatgaag 414 ||||||||||||| |||||||||| Sbjct: 534 tggtctcccaagctagaaatgaag 557
>emb|V01342.1|SCTRP5A Yeast gene (trp5) for tryptophan synthetase Length = 2992 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 tggtctcccaagcaagaaatgaag 414 ||||||||||||| |||||||||| Sbjct: 752 tggtctcccaagctagaaatgaag 775
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 143 cggctacgaccgccacatcaccatcttc 170 |||||||| |||| |||||||||||||| Sbjct: 142355 cggctacgcccgctacatcaccatcttc 142328
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gccacatcaccatcttctcc 173 |||||||||||||||||||| Sbjct: 5473678 gccacatcaccatcttctcc 5473659
>gb|AC017088.8| Homo sapiens BAC clone RP11-496P1 from 2, complete sequence Length = 200440 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 caccacccaggcccagctcc 96 |||||||||||||||||||| Sbjct: 87687 caccacccaggcccagctcc 87668
>gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, complete sequence Length = 184453 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 tgtagttgctatggtcctgg 546 |||||||||||||||||||| Sbjct: 24165 tgtagttgctatggtcctgg 24184
>dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2K18 Length = 41465 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 495 tacacgcagcatgcatacatgagaccccttgg 526 ||||| || ||||| ||||||||||||||||| Sbjct: 18295 tacactcaacatgcttacatgagaccccttgg 18264
>gb|DQ331977.1| Synthetic construct Saccharomyces cerevisiae clone FLH202464.01X TRP5 gene, complete sequence Length = 2124 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 tggtctcccaagcaagaaatgaag 414 ||||||||||||| |||||||||| Sbjct: 254 tggtctcccaagctagaaatgaag 277
>gb|U27311.1|SAU27311 Stigmatella aurantiaca RNA polymerase sigma C subunit (sigC) gene, complete cds Length = 1253 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gcaccacccaggcccagctccggc 99 |||||||||||||||||| ||||| Sbjct: 455 gcaccacccaggcccagcgccggc 478
>gb|J02562.1|SYNTRIS22 yeast (s.cerevisiae) trp5 gene and chimeric is2 element: 3'end Length = 709 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 tggtctcccaagcaagaaatgaag 414 ||||||||||||| |||||||||| Sbjct: 445 tggtctcccaagctagaaatgaag 468
>emb|AL671426.6| Mouse DNA sequence from clone RP23-107F15 on chromosome X, complete sequence Length = 123745 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 agaaaatgctcagctcttca 578 |||||||||||||||||||| Sbjct: 30111 agaaaatgctcagctcttca 30130 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,102,539 Number of Sequences: 3902068 Number of extensions: 4102539 Number of successful extensions: 84997 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 84493 Number of HSP's gapped (non-prelim): 503 length of query: 579 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 556 effective length of database: 17,143,297,704 effective search space: 9531673523424 effective search space used: 9531673523424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
