ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart19c07 |
|---|---|
| Clone Library Name | barley_pub |
>ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.13.3) (PhETR1)| Length = 740 Score = 229 bits (583), Expect = 6e-60 Identities = 113/193 (58%), Positives = 145/193 (75%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM AI+ +EQRLM+ETILKSS+ LATL NDVLD+ Sbjct: 343 ARNDFLAVMNHEMRTPMHAIIALSSLLQETDLTSEQRLMVETILKSSNLLATLINDVLDL 402 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+LDIA F+LHA F V NLIKP+A+ K+L + ++++P+LP IGD K L+Q Sbjct: 403 SRLEDGSLQLDIATFNLHAVFRQVFNLIKPIASVKKLFITLNVSPDLPEYVIGDEKRLVQ 462 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 IMLNV GN++KF+KEG +S+ A +A+ +S+RDP A + PV SD FY+ VQVKD+G GI Sbjct: 463 IMLNVVGNAVKFSKEGIISVTAFVAKSESVRDPRAPDFFPVSSDNQFYMRVQVKDSGSGI 522 Query: 546 RPEDMAHTFRKFA 584 P+DM F KFA Sbjct: 523 NPQDMPKLFTKFA 535
>ETR1_CUCMR (O82436) Ethylene receptor (EC 2.7.13.3) (MEETR1) (Cm-ETR1)| Length = 740 Score = 227 bits (578), Expect = 2e-59 Identities = 113/193 (58%), Positives = 142/193 (73%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM AI+ EQRLM+ETILKSS+ LATL NDVLD+ Sbjct: 343 ARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDL 402 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+LDI F+LHA F +V+NLIKPV K+LS+ + L P+LP A+GD K LMQ Sbjct: 403 SRLEDGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGPDLPVFAVGDEKRLMQ 462 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 +LNV GN++KF+KEG +SI+A +A+ ++ R+ + HPVPSD FYL VQVKDTG GI Sbjct: 463 AILNVVGNAVKFSKEGSISISAIVAKSETFREIRVPDFHPVPSDSHFYLRVQVKDTGSGI 522 Query: 546 RPEDMAHTFRKFA 584 P+D+ F KFA Sbjct: 523 SPQDIPKLFTKFA 535
>ETR1_LYCES (Q41342) Ethylene receptor 1 (EC 2.7.13.3) (LeETR1)| Length = 754 Score = 226 bits (577), Expect = 3e-59 Identities = 115/192 (59%), Positives = 144/192 (75%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM AI+ EQRLM+ETILKSS+ LATL NDVLD+ Sbjct: 357 ARNDFLAVMNHEMRTPMHAIIALSSLLQETDLTPEQRLMVETILKSSNLLATLINDVLDL 416 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+LDI F+LHA F +V +LIKP+A+ K+L V +SL+ +LP IGD K LMQ Sbjct: 417 SRLEDGSLQLDIGTFNLHALFREVHSLIKPIASVKKLFVTLSLSSDLPEYVIGDEKRLMQ 476 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I+LNV GN++KF+KEG+VSI+A +A+ DSLRDP A VPS+ FYL VQ+KDTG GI Sbjct: 477 ILLNVVGNAVKFSKEGNVSISAFVAKSDSLRDPRAPEFFAVPSENHFYLRVQIKDTGIGI 536 Query: 546 RPEDMAHTFRKF 581 P+D+ + F KF Sbjct: 537 TPQDIPNLFSKF 548
>ETR1_MALDO (O81122) Ethylene receptor (EC 2.7.13.3)| Length = 741 Score = 224 bits (572), Expect = 1e-58 Identities = 115/193 (59%), Positives = 145/193 (75%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM AI+ AEQRLM+ETIL+SS+ LATL NDVLD+ Sbjct: 343 ARNDFLAVMNHEMRTPMHAIIALSSLLQETELTAEQRLMVETILRSSNLLATLINDVLDL 402 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+L+IA F+LH+ F +V N+IKPVA+ KRLSV +++A +LP AIGD K LMQ Sbjct: 403 SRLEDGSLQLEIATFNLHSVFREVHNMIKPVASIKRLSVTLNIAADLPMYAIGDEKRLMQ 462 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 +LNV GN++KF+KEG +SI A +A+ +SLRD A + PV SD FYL VQVKD+G GI Sbjct: 463 TILNVVGNAVKFSKEGSISITAFVAKSESLRDFRAPDFFPVQSDNHFYLRVQVKDSGSGI 522 Query: 546 RPEDMAHTFRKFA 584 P+D+ F KFA Sbjct: 523 NPQDIPKLFTKFA 535
>ETR1_PRUPE (Q9M7M1) Ethylene receptor (EC 2.7.13.3)| Length = 738 Score = 223 bits (568), Expect = 3e-58 Identities = 115/193 (59%), Positives = 142/193 (73%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM AI+ EQRLM+ETILKSS LATL NDVLD+ Sbjct: 343 ARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSHLLATLINDVLDL 402 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+L+IA F+LH+ F +V NLIKPVA+ K+LSV ++LA +LP A+GD K LMQ Sbjct: 403 SRLEDGSLQLEIATFNLHSVFREVHNLIKPVASVKKLSVSLNLAADLPVQAVGDEKRLMQ 462 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I+LNV GN++KF+KEG +SI A +A+ +SLRD A P SD FYL VQVKD+G GI Sbjct: 463 IVLNVVGNAVKFSKEGSISITAFVAKSESLRDFRAPEFFPAQSDNHFYLRVQVKDSGSGI 522 Query: 546 RPEDMAHTFRKFA 584 P+D+ F KFA Sbjct: 523 NPQDIPKLFTKFA 535
>ETR1_CUCSA (Q9SSY6) Ethylene receptor (EC 2.7.13.3) (CS-ETR1)| Length = 740 Score = 223 bits (568), Expect = 3e-58 Identities = 112/193 (58%), Positives = 141/193 (73%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM AI+ EQRLM+ETILKSS+ LATL NDVLD+ Sbjct: 343 ARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDL 402 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+LDI F+LHA F +V+NLIKPV K+LS+ + L +LP A+GD K LMQ Sbjct: 403 SRLEDGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGLDLPVFAVGDEKRLMQ 462 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 +LNV GN++KF+KEG +SI+A +A+ ++ R+ + HPVPSD FYL VQVKDTG GI Sbjct: 463 AILNVVGNAVKFSKEGSISISAIVAKAETFREIRVPDFHPVPSDSHFYLRVQVKDTGSGI 522 Query: 546 RPEDMAHTFRKFA 584 P+D+ F KFA Sbjct: 523 SPQDIPKLFTKFA 535
>ETR1_PASED (Q9ZWL6) Ethylene receptor (EC 2.7.13.3) (PE-ETR1)| Length = 738 Score = 223 bits (567), Expect = 4e-58 Identities = 110/193 (56%), Positives = 144/193 (74%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM A++ EQRLM+ETILKSS+ LATL NDVLD+ Sbjct: 343 ARNDFLAVMNHEMRTPMHAVIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDL 402 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 SKL +GSL+LD F+LHA F +V+NLIKP+A+ K+L ++++LAP+LP A+GD K L+Q Sbjct: 403 SKLEDGSLQLDSGTFNLHAVFREVLNLIKPIASVKKLLLLLNLAPDLPEYAVGDEKRLIQ 462 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I+LN+ GN++KF+KEG +SI A +A+ +SLRD + P PS+ FYL VQVKD+G GI Sbjct: 463 IILNIVGNAMKFSKEGSISITAIVAKLESLRDARVPDFFPTPSENHFYLRVQVKDSGVGI 522 Query: 546 RPEDMAHTFRKFA 584 P+D+ F KFA Sbjct: 523 NPQDIPKLFIKFA 535
>ETR2_LYCES (O49187) Ethylene receptor 2 (EC 2.7.13.3) (LeETR2)| Length = 736 Score = 222 bits (565), Expect = 7e-58 Identities = 115/193 (59%), Positives = 140/193 (72%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFL VMNHEMRTPM A+V EQRLM+ETILKSS+ LATL NDVLD+ Sbjct: 341 ARNDFLGVMNHEMRTPMHAVVALSSLLQESELIPEQRLMVETILKSSNLLATLINDVLDL 400 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+LD+ F+LHA F +V+NLIKPVAA K+L V +SL+ + P AIGD K LMQ Sbjct: 401 SRLEDGSLQLDVGTFNLHALFREVLNLIKPVAAVKKLFVTLSLSSDFPEVAIGDEKRLMQ 460 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I+LNV GN++KF+KEG VS++A A+ +SL DP A PV S+ FYL VQVKDTG GI Sbjct: 461 ILLNVVGNAVKFSKEGSVSVSAVNAKSESLIDPRAPEFFPVQSENHFYLRVQVKDTGSGI 520 Query: 546 RPEDMAHTFRKFA 584 P+D F KFA Sbjct: 521 NPQDFPKLFCKFA 533
>ETR2_PELHO (Q9XH57) Ethylene receptor 2 (EC 2.7.13.3) (PhETR2)| Length = 741 Score = 220 bits (560), Expect = 3e-57 Identities = 108/193 (55%), Positives = 143/193 (74%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM AI+ EQRLM+ET+LKSS+ LATL NDVLD+ Sbjct: 343 ARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETVLKSSNLLATLINDVLDL 402 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+LDI F+LHA +V NLIKP+A+ K+L + +++A +LP A+GD K L+Q Sbjct: 403 SRLEDGSLQLDIGTFNLHALLREVHNLIKPIASVKKLCISLNVATDLPEYAVGDEKRLVQ 462 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I+LNV GN++KF+KEG++SI A +A+ +SLRDP A + P+ + FYL VQVKD+G GI Sbjct: 463 IILNVVGNAVKFSKEGNISITAFVAKSESLRDPRAPDFFPICGENQFYLRVQVKDSGLGI 522 Query: 546 RPEDMAHTFRKFA 584 P+D+ F KFA Sbjct: 523 NPQDIPRLFTKFA 535
>ETR1_TOBAC (O48929) Ethylene receptor (EC 2.7.13.3) (NT-ETR1)| Length = 738 Score = 210 bits (535), Expect = 2e-54 Identities = 110/193 (56%), Positives = 134/193 (69%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM AI+ EQRLM+ETILKSS+ LATL NDVLD+ Sbjct: 341 ARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDL 400 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+LD+ F+LH F V+NLIKP+A+ K ++ P AIGD K LMQ Sbjct: 401 SRLEDGSLQLDVGTFNLHVLFRKVLNLIKPIASVKNCLSRLTCLQICPEFAIGDEKRLMQ 460 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I+LNV GN++KF+KEG VSI+A A+ +SL DP A PV S+ FYL VQVKDTG GI Sbjct: 461 ILLNVVGNAVKFSKEGSVSISAVAAKSESLSDPRAPEFFPVQSENHFYLRVQVKDTGSGI 520 Query: 546 RPEDMAHTFRKFA 584 P+D+ F KFA Sbjct: 521 NPQDIPKLFCKFA 533
>ETR1_ARATH (P49333) Ethylene receptor (EC 2.7.13.3)| Length = 738 Score = 205 bits (521), Expect = 9e-53 Identities = 101/193 (52%), Positives = 138/193 (71%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM AI+ EQRLM+ETILKSS+ LATL NDVLD+ Sbjct: 343 ARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLMNDVLDL 402 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+L++ F+LH F +V+NLIKP+A K+L + ++LAP+LP +GD K LMQ Sbjct: 403 SRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFVVGDEKRLMQ 462 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I+LN+ GN++KF+K+G +S+ A + + D+ A++ VP+ FYL V+VKD+G GI Sbjct: 463 IILNIVGNAVKFSKQGSISVTALVTKSDT----RAADFFVVPTGSHFYLRVKVKDSGAGI 518 Query: 546 RPEDMAHTFRKFA 584 P+D+ F KFA Sbjct: 519 NPQDIPKIFTKFA 531
>ETR1_BRAOL (O49230) Ethylene receptor (EC 2.7.13.3)| Length = 735 Score = 204 bits (518), Expect = 2e-52 Identities = 100/193 (51%), Positives = 135/193 (69%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ARNDFLAVMNHEMRTPM AI+ EQRLM+ET+LKSS LATL NDVLD+ Sbjct: 343 ARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETVLKSSSLLATLMNDVLDL 402 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S+L +GSL+L++ F+LH F +V+NLIKP+A K+L + ++LAP+LP +GD K LMQ Sbjct: 403 SRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFVVGDEKRLMQ 462 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I+LN+ GN++KF+K+G +S+ A + + D+ P + VP+ FYL V+VKD G GI Sbjct: 463 IILNIVGNAVKFSKQGSISVTALVTKSDNRAPP---DFFVVPTGSHFYLRVKVKDLGAGI 519 Query: 546 RPEDMAHTFRKFA 584 P+D+ F KFA Sbjct: 520 NPQDIPKLFTKFA 532
>BARA_SHIFL (P59342) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 105 bits (261), Expect = 1e-22 Identities = 62/191 (32%), Positives = 98/191 (51%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 +++FLA M+HE+RTP+ ++ QR + TI +S++ L + NDVLD S Sbjct: 293 KSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFS 352 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 KL G L L+ PF L +T +VV L+ + K L + +++ ++P IGD L QI Sbjct: 353 KLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQI 412 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIR 548 + N+ GN+IKFT+ G++ I S+ + VQ++DTG GI Sbjct: 413 ITNLVGNAIKFTENGNIDILVE---------------KRALSNTKVQIEVQIRDTGIGIP 457 Query: 549 PEDMAHTFRKF 581 D + F+ F Sbjct: 458 ERDQSRLFQAF 468
>BARA_ECOLI (P0AEC5) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 105 bits (261), Expect = 1e-22 Identities = 62/191 (32%), Positives = 98/191 (51%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 +++FLA M+HE+RTP+ ++ QR + TI +S++ L + NDVLD S Sbjct: 293 KSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFS 352 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 KL G L L+ PF L +T +VV L+ + K L + +++ ++P IGD L QI Sbjct: 353 KLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQI 412 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIR 548 + N+ GN+IKFT+ G++ I S+ + VQ++DTG GI Sbjct: 413 ITNLVGNAIKFTENGNIDILVE---------------KRALSNTKVQIEVQIRDTGIGIP 457 Query: 549 PEDMAHTFRKF 581 D + F+ F Sbjct: 458 ERDQSRLFQAF 468
>BARA_ECOL6 (P0AEC6) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 105 bits (261), Expect = 1e-22 Identities = 62/191 (32%), Positives = 98/191 (51%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 +++FLA M+HE+RTP+ ++ QR + TI +S++ L + NDVLD S Sbjct: 293 KSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFS 352 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 KL G L L+ PF L +T +VV L+ + K L + +++ ++P IGD L QI Sbjct: 353 KLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQI 412 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIR 548 + N+ GN+IKFT+ G++ I S+ + VQ++DTG GI Sbjct: 413 ITNLVGNAIKFTENGNIDILVE---------------KRALSNTKVQIEVQIRDTGIGIP 457 Query: 549 PEDMAHTFRKF 581 D + F+ F Sbjct: 458 ERDQSRLFQAF 468
>BARA_ECO57 (P0AEC7) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 105 bits (261), Expect = 1e-22 Identities = 62/191 (32%), Positives = 98/191 (51%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 +++FLA M+HE+RTP+ ++ QR + TI +S++ L + NDVLD S Sbjct: 293 KSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFS 352 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 KL G L L+ PF L +T +VV L+ + K L + +++ ++P IGD L QI Sbjct: 353 KLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQI 412 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIR 548 + N+ GN+IKFT+ G++ I S+ + VQ++DTG GI Sbjct: 413 ITNLVGNAIKFTENGNIDILVE---------------KRALSNTKVQIEVQIRDTGIGIP 457 Query: 549 PEDMAHTFRKF 581 D + F+ F Sbjct: 458 ERDQSRLFQAF 468
>GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)| Length = 907 Score = 97.1 bits (240), Expect = 3e-20 Identities = 59/192 (30%), Positives = 98/192 (51%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 +++FLA M+HE+RTP+ I+ Q + TI KS+D L ++ N++LD S Sbjct: 275 KSEFLANMSHEIRTPLNGILGFTHLLQKSELTPRQFDYLGTIEKSADNLLSIINEILDFS 334 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 K+ G L LD PF+L D + ++ P A K+L ++ + + P GD L QI Sbjct: 335 KIEAGKLVLDNIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLALSGDPLRLRQI 394 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIR 548 + N+ N+IKFT+EG + A + + + +A L + V+DTG G+ Sbjct: 395 LTNLVSNAIKFTREGTIVARAML---EDETEEHAQ------------LRISVQDTGIGLS 439 Query: 549 PEDMAHTFRKFA 584 +D+ F+ F+ Sbjct: 440 SQDVRALFQAFS 451
>DSPA_SYNY3 (P20169) Drug sensory protein A (EC 2.7.13.3)| Length = 663 Score = 92.4 bits (228), Expect = 8e-19 Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 4/196 (2%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPM---KAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDV 176 A++ F++ ++HE+RTP+ K+ + E++ +ET +D L+ L NDV Sbjct: 422 AKSQFISNVSHELRTPLFNIKSFIETLSEFGEDLSEVERKEFLETANHETDRLSRLVNDV 481 Query: 177 LDISKLGNGSL-ELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRK 353 LD+SKL + + +LD DL+ + + A K+L + L P+LP A+G+ Sbjct: 482 LDLSKLESSKIYQLDAV--DLYQLIEQSLRSYQLNAKDKQLQLEKILDPDLPF-ALGNYD 538 Query: 354 LLMQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDT 533 LL+Q+M N+ GNS KFTK G I + + SNL DG + V++ DT Sbjct: 539 LLLQVMTNLIGNSFKFTKAGGKIIVRAYPL-------HRSNLR--AEDGPGLVRVEISDT 589 Query: 534 GCGIRPEDMAHTFRKF 581 G GI PED A F +F Sbjct: 590 GIGIDPEDQAAIFERF 605
>RPFC_XANCP (P0C0F6) Sensory/regulatory protein rpfC (EC 2.7.13.3)| Length = 677 Score = 89.4 bits (220), Expect = 7e-18 Identities = 57/185 (30%), Positives = 90/185 (48%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 A++ FLA M+HE RTP+ + AEQ+ + TI S+ L +L +VLDI Sbjct: 139 AKSRFLANMSHEFRTPLNGLSGMTEVLATTRLDAEQKECLNTIQASARSLLSLVEEVLDI 198 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S + G + +D F L V +++P A +RL +A ++P GD L Q Sbjct: 199 SAIEAGKIRIDRRDFSLREMIGSVNLILQPQARGRRLEYGTQVADDVPDLLKGDTAHLRQ 258 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 ++LN+ GN++KFT+ GHV + + ++ + L V+DTG G+ Sbjct: 259 VLLNLVGNAVKFTEHGHVLLRVTRVSGS--------------AEDAVRLRFDVEDTGIGV 304 Query: 546 RPEDM 560 P DM Sbjct: 305 -PMDM 308
>RPFC_XANC8 (P0C0F7) Sensory/regulatory protein rpfC (EC 2.7.13.3)| Length = 677 Score = 89.4 bits (220), Expect = 7e-18 Identities = 57/185 (30%), Positives = 90/185 (48%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 A++ FLA M+HE RTP+ + AEQ+ + TI S+ L +L +VLDI Sbjct: 139 AKSRFLANMSHEFRTPLNGLSGMTEVLATTRLDAEQKECLNTIQASARSLLSLVEEVLDI 198 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 S + G + +D F L V +++P A +RL +A ++P GD L Q Sbjct: 199 SAIEAGKIRIDRRDFSLREMIGSVNLILQPQARGRRLEYGTQVADDVPDLLKGDTAHLRQ 258 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 ++LN+ GN++KFT+ GHV + + ++ + L V+DTG G+ Sbjct: 259 VLLNLVGNAVKFTEHGHVLLRVTRVSGS--------------AEDAVRLRFDVEDTGIGV 304 Query: 546 RPEDM 560 P DM Sbjct: 305 -PMDM 308
>MAK2_SCHPO (O14002) Peroxide stress-activated histidine kinase mak2 (EC| 2.7.13.3) (Mcs4-associated kinase 2) (His-Asp phosphorelay kinase phk1) Length = 2310 Score = 88.6 bits (218), Expect = 1e-17 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 1/192 (0%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 + +FLA M+HE+RTP + EQ ++ T +S L + +D+L+ S Sbjct: 1754 KTNFLANMSHELRTPFSSFYGMLSLLSDTKLNEEQYDIVSTAKQSCTSLVQIIDDLLNFS 1813 Query: 189 KLGNGSLELDIAP-FDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 +L +G ++L+ FD+ D + L+ P + K + + + P +PA GD L Q Sbjct: 1814 ELKSGKMKLEPDKVFDVEENIADCIELVYPSLSSKPVQISYDIYPNVPALLAGDSAKLRQ 1873 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 ++ N+ GNS+KFT EGH+ + +A + + + L +++DTG G+ Sbjct: 1874 VITNLLGNSVKFTTEGHI-LLRCMAIDEEIN----------AEENQCKLRFEIEDTGIGL 1922 Query: 546 RPEDMAHTFRKF 581 + E + F F Sbjct: 1923 KEEQLKLLFNPF 1934
>LUXQ_VIBVY (Q7MD16) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 857 Score = 87.8 bits (216), Expect = 2e-17 Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 R DFLA M+HE+RTP+ I+ AE ++ + S + L + ND+LD S Sbjct: 484 RADFLAKMSHEIRTPLNGILGIAQLLKRSVNDAENLKQVDVLCNSGEHLLAVLNDILDFS 543 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPA-CAI-GDRKLLM 362 K+ G + F+ + T + N+ +P+ C+ V + ++P C + D+ L Sbjct: 544 KIEQGKFNIKKRDFNFYDTLNTLENIYRPI--CREKGVSFEIHNQIPLDCQLHTDQVRLN 601 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 QIM N+ N++KFT G + ++ + + +A + H + L +QV DTG G Sbjct: 602 QIMFNLISNAVKFTPAGRIEVSFKL-------EQFARSEHSI-------LSIQVSDTGIG 647 Query: 543 IRPEDMAHTFRKF 581 I + F F Sbjct: 648 IDESKLESIFEPF 660
>LUXQ_VIBVU (Q8D5Z6) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 857 Score = 87.8 bits (216), Expect = 2e-17 Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 R DFLA M+HE+RTP+ I+ AE ++ + S + L + ND+LD S Sbjct: 484 RADFLAKMSHEIRTPLNGILGIAQLLKRSVNDAENLKQVDVLCNSGEHLLAVLNDILDFS 543 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPA-CAI-GDRKLLM 362 K+ G + F+ + T + N+ +P+ C+ V + ++P C + D+ L Sbjct: 544 KIEQGKFNIKKRDFNFYDTLNTLENIYRPI--CREKGVSFEIHNQIPLDCQLHTDQVRLN 601 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 QIM N+ N++KFT G + ++ + + +A + H + L +QV DTG G Sbjct: 602 QIMFNLISNAVKFTPAGRIEVSFKL-------EKFARSEHSI-------LSIQVSDTGIG 647 Query: 543 IRPEDMAHTFRKF 581 I + F F Sbjct: 648 IDESKLESIFEPF 660
>LUXQ_VIBPA (Q87GU5) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 858 Score = 87.8 bits (216), Expect = 2e-17 Identities = 55/192 (28%), Positives = 89/192 (46%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 AR DFLA M+HE+RTP+ I+ EQ+ I+ + S + L + ND+LD Sbjct: 481 ARADFLAKMSHEIRTPINGILGVAQLLKDSVEAEEQKNQIDVLRHSGEHLLAVLNDILDF 540 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 SK+ G + PF T + N+ +P+ K + +++ + D+ L Q Sbjct: 541 SKIEQGKFNIQKHPFSFADTMRTLENIYRPICENKGVELVIENQLDGNVEIFTDQVRLNQ 600 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I+ N+ N++KFT G V + A L Y ++ + LVV++ DTG GI Sbjct: 601 ILFNLVSNAVKFTPSGCVRLHA------ELEQFYGAD--------NSVLVVEISDTGIGI 646 Query: 546 RPEDMAHTFRKF 581 + + F F Sbjct: 647 ESDKLDEMFEPF 658
>LUXQ_VIBCH (Q9KLK7) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 857 Score = 87.0 bits (214), Expect = 4e-17 Identities = 54/191 (28%), Positives = 86/191 (45%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 R +FLA M+HE+RTP+ ++ EQR + + S + L + ND+LD S Sbjct: 480 RAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFS 539 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 +L G + F L + + +P+ K L ++V+ A D+ + QI Sbjct: 540 RLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQI 599 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIR 548 + N+ N+IKFT +G + + + D L LV+QV DTG GIR Sbjct: 600 LFNLLNNAIKFTHQGSIRVELQLIEGDPLAQ----------------LVIQVVDTGIGIR 643 Query: 549 PEDMAHTFRKF 581 +D+ F F Sbjct: 644 EQDLTVIFEPF 654
>LUXQ_VIBHA (P54302) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 859 Score = 86.7 bits (213), Expect = 5e-17 Identities = 54/192 (28%), Positives = 88/192 (45%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 AR DFLA M+HE+RTP+ I+ EQ+ I+ + S + L + ND+LD Sbjct: 482 ARADFLAKMSHEIRTPINGILGVAQLLKDSVDTQEQKNQIDVLCHSGEHLLAVLNDILDF 541 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 SK+ G + PF T + N+ +P+ K + +++ + D+ L Q Sbjct: 542 SKIEQGKFNIQKHPFSFTDTMRTLENIYRPICTNKGVELVIENELDPNVEIFTDQVRLNQ 601 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I+ N+ N++KFT G + + A L Y + + LVV++ DTG GI Sbjct: 602 ILFNLVSNAVKFTPIGSIRLHA------ELEQFYGAE--------NSVLVVELTDTGIGI 647 Query: 546 RPEDMAHTFRKF 581 + + F F Sbjct: 648 ESDKLDQMFEPF 659
>TORS_ECOLI (P39453) Sensor protein torS (EC 2.7.13.3)| Length = 914 Score = 86.3 bits (212), Expect = 6e-17 Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 2/194 (1%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 A++ FLA M+HE+RTP+ I+ QR + I S + L T+ ND+LD Sbjct: 443 AKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDY 502 Query: 186 SKLGNGSLELDIA--PFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLL 359 S + G + ++ PF+ + L+ + + + ++A ++P +GD + + Sbjct: 503 SAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDMPCALMGDPRRI 562 Query: 360 MQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGC 539 Q++ N+ N+++FT EG++ + + +DG +L V+V+D+GC Sbjct: 563 RQVITNLLSNALRFTDEGYIILRSR-------------------TDGEQWL-VEVEDSGC 602 Query: 540 GIRPEDMAHTFRKF 581 GI P +A F+ F Sbjct: 603 GIDPAKLAEIFQPF 616
>TORS_ECO57 (P58356) Sensor protein torS (EC 2.7.13.3)| Length = 914 Score = 85.1 bits (209), Expect = 1e-16 Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 A++ FLA M+HE+RTP+ I+ QR + I S + L T+ ND+LD Sbjct: 443 AKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDY 502 Query: 186 SKLGNGSLELDIA--PFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLL 359 S + G + ++ PF+ + L+ + + + ++A ++P +GD + + Sbjct: 503 SAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDVPTALMGDPRRI 562 Query: 360 MQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGC 539 Q++ N+ N+++FT EG + + + +DG +L V+V+D+GC Sbjct: 563 RQVITNLLSNALRFTDEGQIVLRSR-------------------TDGEQWL-VEVEDSGC 602 Query: 540 GIRPEDMAHTFRKF 581 GI P +A F+ F Sbjct: 603 GIDPAKLAEIFQPF 616
>MAK1_SCHPO (Q9P7Q7) Peroxide stress-activated histidine kinase mak1 (EC| 2.7.13.3) (Mcs4-associated kinase 1) (His-Asp phosphorelay kinase phk3) Length = 1639 Score = 84.3 bits (207), Expect = 2e-16 Identities = 55/193 (28%), Positives = 91/193 (47%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 ++ +L+ M+HE+RTP+ I AEQ I +S+ L T+ ND+LD+ Sbjct: 993 SKMQYLSNMSHEIRTPLIGITGMVSFLLETQMSAEQLSYARIIQQSAKSLLTVINDILDL 1052 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 SK+ G ++L F + A D + +A K + + ++ ++P GD + Q Sbjct: 1053 SKVRAGMMKLTSQRFSVRAMMEDANETLGTLAFSKGIELNYTVDIDVPDIVFGDNMRMRQ 1112 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 + LNV GN+IKFT G V S+ + D Y++N + L + DTG G Sbjct: 1113 VALNVIGNAIKFTNVGEVFTRCSVEKID-----YSTN--------TVVLKWECIDTGQGF 1159 Query: 546 RPEDMAHTFRKFA 584 +D F+ F+ Sbjct: 1160 NRDDQLQMFKPFS 1172
>ARCB_HAEIN (P44578) Aerobic respiration control sensor protein arcB homolog| (EC 2.7.13.3) Length = 325 Score = 82.8 bits (203), Expect = 7e-16 Identities = 54/191 (28%), Positives = 88/191 (46%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 ++ LA ++HE RTP+ IV QR ++TI S+ L + +D++D+ Sbjct: 122 KSTLLATISHEFRTPLNGIVGLSQILLDDELDDLQRNYLKTINISAVSLGYIFSDIIDLE 181 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 K+ +EL+ P D A D+ N +A K L + L P LP DR L QI Sbjct: 182 KIDASRIELNRQPTDFPALLNDIYNFASFLAKEKNLIFSLELEPNLPNWLNLDRVRLSQI 241 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIR 548 + N+ N++KFT +G++ + + + ++ +V KDTG GI Sbjct: 242 LWNLISNAVKFTDQGNIILKI------------------MRNQDCYHFIV--KDTGMGIS 281 Query: 549 PEDMAHTFRKF 581 PE+ H F + Sbjct: 282 PEEQKHIFEMY 292
>ARCB_SHIFL (P0AEC4) Aerobic respiration control sensor protein arcB (EC| 2.7.13.3) Length = 778 Score = 80.9 bits (198), Expect = 3e-15 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 3/181 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 + F++ ++HE+RTP+ IV AEQ ++TI S+ L + ND++D+ Sbjct: 283 KTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMD 342 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 K+ ++LD P D + D+ NL A K L + LP I D L QI Sbjct: 343 KMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQI 402 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPS---DGSFYLVVQVKDTGC 539 + N+ N++KFT++G V++ D L + +P D F + QVKD+ Sbjct: 403 LWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHG 462 Query: 540 G 542 G Sbjct: 463 G 463
>ARCB_ECOLI (P0AEC3) Aerobic respiration control sensor protein arcB (EC| 2.7.13.3) Length = 778 Score = 80.9 bits (198), Expect = 3e-15 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 3/181 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 + F++ ++HE+RTP+ IV AEQ ++TI S+ L + ND++D+ Sbjct: 283 KTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMD 342 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 K+ ++LD P D + D+ NL A K L + LP I D L QI Sbjct: 343 KMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQI 402 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPS---DGSFYLVVQVKDTGC 539 + N+ N++KFT++G V++ D L + +P D F + QVKD+ Sbjct: 403 LWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHG 462 Query: 540 G 542 G Sbjct: 463 G 463
>ARCB_ECO57 (P58363) Aerobic respiration control sensor protein arcB (EC| 2.7.13.3) Length = 778 Score = 80.9 bits (198), Expect = 3e-15 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 3/181 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 + F++ ++HE+RTP+ IV AEQ ++TI S+ L + ND++D+ Sbjct: 283 KTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMD 342 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 K+ ++LD P D + D+ NL A K L + LP I D L QI Sbjct: 343 KMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQI 402 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPS---DGSFYLVVQVKDTGC 539 + N+ N++KFT++G V++ D L + +P D F + QVKD+ Sbjct: 403 LWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHG 462 Query: 540 G 542 G Sbjct: 463 G 463
>PLEC_CAUCR (P37894) Non-motile and phage-resistance protein (EC 2.7.13.3)| Length = 842 Score = 79.0 bits (193), Expect = 1e-14 Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 5/197 (2%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAI--VXXXXXXXXXXXXAEQRL--MIETILKSSDFLATLTND 173 A+++FLA M+HE+RTP+ AI +QR + I S L L ND Sbjct: 600 AKSEFLANMSHELRTPLNAINGFSEIMMNEMFGPLGDQRYKGYSQDIHSSGQHLLALIND 659 Query: 174 VLDISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRK 353 +LD+SK+ G + L L D V L++ A L + + P+LP D + Sbjct: 660 ILDMSKIEAGKMNLKFESMHLEDVAEDAVRLVRNRAEAAGLKLDIDF-PQLPEIE-ADYR 717 Query: 354 LLMQIMLNVAGNSIKFT-KEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKD 530 + Q++LN+ N+IKFT + G V++ A + RDP+ + V V D Sbjct: 718 AVKQVLLNLLSNAIKFTPRAGSVTVRAEVR-----RDPFGD-----------LIKVSVTD 761 Query: 531 TGCGIRPEDMAHTFRKF 581 TG GI ED+A + F Sbjct: 762 TGIGIAKEDLARLAKPF 778
>BVGS_BORPA (P40330) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 75.9 bits (185), Expect = 8e-14 Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 1/194 (0%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAE-QRLMIETILKSSDFLATLTNDVLD 182 A+ FLA M+HE+RTPM AI+ E R I+ S+ L L D+LD Sbjct: 719 AKTTFLATMSHEIRTPMNAIIGMLELALLRPADQEPDRQSIQVAYDSARSLLELIGDILD 778 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 I+K+ G +L L A + L +A K + +++ + D + Sbjct: 779 IAKIEAGKFDLAPVRTALRALPEGAIRLFDGLARQKGIELVLKTDIVGVDDVLIDPLRMK 838 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q++ N+ GN+IKFT EG V + + ARPD + ++ V DTGCG Sbjct: 839 QVLSNLVGNAIKFTTEGQVVLTVT-ARPDG---------------EAAHVQFSVSDTGCG 882 Query: 543 IRPEDMAHTFRKFA 584 I D F+ F+ Sbjct: 883 ISEADQRQLFKPFS 896
>BVGS_BORPE (P16575) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 75.1 bits (183), Expect = 1e-13 Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 1/194 (0%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAE-QRLMIETILKSSDFLATLTNDVLD 182 A+ FLA M+HE+RTPM AI+ E R I+ S+ L L D+LD Sbjct: 719 AKTTFLATMSHEIRTPMNAIIGMLELALLRPTDQEPDRQSIQVAYDSARSLLELIGDILD 778 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 I+K+ G +L L + + +A K + +++ + D + Sbjct: 779 IAKIEAGKFDLAPVRTALRVLPEGAIRVFDGLARQKGIELVLKTDIVGVDDVLIDPLRMK 838 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q++ N+ GN+IKFT EG V +A + ARPD + ++ V DTGCG Sbjct: 839 QVLSNLVGNAIKFTTEGQVVLAVT-ARPDG---------------DAAHVQFSVSDTGCG 882 Query: 543 IRPEDMAHTFRKFA 584 I D F+ F+ Sbjct: 883 ISEADQRQLFKPFS 896
>RCSC_ECOLI (P14376) Sensor kinase protein rcsC (EC 2.7.13.3) (Capsular| synthesis regulator component C) Length = 949 Score = 75.1 bits (183), Expect = 1e-13 Identities = 50/192 (26%), Positives = 88/192 (45%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 +++ FLA ++HE+RTP+ I+ ++ + SS L + +D+LD Sbjct: 469 SKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDF 528 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 SK+ + L+++ F + P+ K+L + + P++P GD L Q Sbjct: 529 SKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQ 588 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 ++ N+ N+IKFT G + LH V +DG YL ++V+DTG GI Sbjct: 589 VISNLLSNAIKFTDTGCIV------------------LH-VRADGD-YLSIRVRDTGVGI 628 Query: 546 RPEDMAHTFRKF 581 +++ F F Sbjct: 629 PAKEVVRLFDPF 640
>BVGS_BORBR (P26762) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 74.7 bits (182), Expect = 2e-13 Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 1/194 (0%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAE-QRLMIETILKSSDFLATLTNDVLD 182 A+ FLA M+HE+RTPM AI+ E R I+ S+ L L D+LD Sbjct: 719 AKTTFLATMSHEIRTPMNAIIGMLELALLRPADQEPDRQSIQVAYDSARSLLELIGDILD 778 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 I+K+ G +L L A + + +A K + +++ + D + Sbjct: 779 IAKIEAGKFDLAPVRTALRALPEGAIRVFDGLARQKGIELVLKTDIVGVDDVLIDPLRMK 838 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q++ N+ GN+IKFT EG V + + ARPD + ++ V DTGCG Sbjct: 839 QVLSNLVGNAIKFTTEGQVVLTVT-ARPDG---------------EAAHVQFSVSDTGCG 882 Query: 543 IRPEDMAHTFRKFA 584 I D F+ F+ Sbjct: 883 ISEADQRQLFKPFS 896
>PHOR_BACSU (P23545) Alkaline phosphatase synthesis sensor protein phoR (EC| 2.7.13.3) Length = 579 Score = 74.3 bits (181), Expect = 2e-13 Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRL--MIETILKSSDFLATLTNDVLD 182 R DF+A ++HE++TP+ +I ++ L + ILK S+ L +L D+LD Sbjct: 351 RKDFVANVSHELKTPITSIKGFTETLLDGAMEDKEALSEFLSIILKESERLQSLVQDLLD 410 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 +SK+ + L I F+ ++ L+K A K +S+ +++ P+ P GD L Sbjct: 411 LSKIEQQNFTLSIETFEPAKMLGEIETLLKHKADEKGISLHLNV-PKDPQYVSGDPYRLK 469 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q+ LN+ N++ +T EG A N+ P D + ++V D+G G Sbjct: 470 QVFLNLVNNALTYTPEG---------------GSVAINVKPREKD----IQIEVADSGIG 510 Query: 543 IRPEDMAHTFRKF 581 I+ E++ F +F Sbjct: 511 IQKEEIPRIFERF 523
>RCSC_SALTY (P58662) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 73.9 bits (180), Expect = 3e-13 Identities = 50/192 (26%), Positives = 87/192 (45%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 +++ FLA ++HE+RTP+ I+ ++ + SS L + +D+LD Sbjct: 469 SKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVERLVTAMNNSSSLLLKIISDILDF 528 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 SK+ + L+++ F + P+ K+L + + P++P GD L Q Sbjct: 529 SKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVSLNGDPMRLQQ 588 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 ++ N+ N+IKFT G + LH V DG YL ++V+DTG GI Sbjct: 589 VISNLLSNAIKFTDIGCIV------------------LH-VRCDGD-YLSIRVRDTGVGI 628 Query: 546 RPEDMAHTFRKF 581 +++ F F Sbjct: 629 PAKEVVRLFDPF 640
>RCSC_SALTI (Q56128) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 73.2 bits (178), Expect = 5e-13 Identities = 50/192 (26%), Positives = 87/192 (45%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 +++ FLA ++HE+RTP+ I+ ++ + SS L + +D+LD Sbjct: 469 SKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDF 528 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 SK+ + L+++ F + P+ K+L + + P++P GD L Q Sbjct: 529 SKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVSLNGDPMRLQQ 588 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 ++ N+ N+IKFT G + LH V DG YL ++V+DTG GI Sbjct: 589 VISNLLSNAIKFTDIGCIV------------------LH-VRCDGD-YLSIRVRDTGVGI 628 Query: 546 RPEDMAHTFRKF 581 +++ F F Sbjct: 629 PAKEVVRLFDPF 640
>EVGS_ECOLI (P30855) Sensor protein evgS precursor (EC 2.7.13.3)| Length = 1197 Score = 70.1 bits (170), Expect = 5e-12 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 2/195 (1%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRL-MIETILKSSDFLATLTNDVLD 182 A++ FLA M+HE+RTP+ +I+ EQR+ I + L L ++LD Sbjct: 711 AKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIGEILD 770 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLA-PELPACAIGDRKLL 359 + K+ +G+ +L D+ + + +AA K +++ S PE I D + Sbjct: 771 VDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPEHYLVKI-DPQAF 829 Query: 360 MQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGC 539 Q++ N+ N++KFT EG V I S+ D D + + + D+G Sbjct: 830 KQVLSNLLSNALKFTTEGAVKITTSLGHID---------------DNHAVIKMTIMDSGS 874 Query: 540 GIRPEDMAHTFRKFA 584 G+ E+ F++++ Sbjct: 875 GLSQEEQQQLFKRYS 889
>EVGS_ECO57 (P58402) Sensor protein evgS precursor (EC 2.7.13.3)| Length = 1197 Score = 68.9 bits (167), Expect = 1e-11 Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 2/195 (1%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRL-MIETILKSSDFLATLTNDVLD 182 A++ FLA M+HE+RTP+ +I+ EQR+ I + L L ++LD Sbjct: 711 AKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIGEILD 770 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLA-PELPACAIGDRKLL 359 + K+ +G+ +L D+ + + +AA K +++ S P+ I D + Sbjct: 771 VDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPDHYLVKI-DPQAF 829 Query: 360 MQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGC 539 Q++ N+ N++KFT EG V I S+ D D + + + D+G Sbjct: 830 KQVLSNLLSNALKFTTEGAVKITTSLVHID---------------DNHAVIKMTIMDSGS 874 Query: 540 GIRPEDMAHTFRKFA 584 G+ E+ F++++ Sbjct: 875 GLSQEEQQQLFKRYS 889
>MAK3_SCHPO (O74539) Peroxide stress-activated histidine kinase mak3 (EC| 2.7.13.3) (Mcs4-associated kinase 3) (His-Asp phosphorelay kinase phk2) Length = 2344 Score = 67.8 bits (164), Expect = 2e-11 Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 2/153 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 R++FLA ++HE+RTP +EQR ++ S + L + ND+L+ S Sbjct: 1786 RSNFLANISHELRTPFSGFYGMLSLLDDTNLDSEQRDIVSAARISCEMLLRVINDLLNFS 1845 Query: 189 KL--GNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 KL G +LE D+ F L + D + + A K +++ +++P++P GD + Sbjct: 1846 KLEAGKVTLESDL-EFSLESVVCDCMQSVYSACAEKGINLSYNVSPDIPFFTAGDGMKIG 1904 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRD 461 Q++ ++ NS+K G + + A +A D Sbjct: 1905 QMLKSILDNSVKTVNNGFIRVRAFLAGSSKKND 1937
>DIVJ_CAUCR (Q03228) Histidine protein kinase divJ (EC 2.7.13.3)| Length = 597 Score = 65.1 bits (157), Expect = 1e-10 Identities = 61/196 (31%), Positives = 85/196 (43%), Gaps = 5/196 (2%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXA---EQRLMIETILKSSDFLATLTNDVL 179 R FLA M+HE+RTP+ AI+ E I +S L L NDVL Sbjct: 329 RARFLANMSHELRTPLNAIMGFSDIMRARMFGPLSDRYAEYAELIHESGGHLLDLINDVL 388 Query: 180 DISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAP-ELPACAIGDRKL 356 D+SK+ EL FD + L++ + + + L P EL A DR+ Sbjct: 389 DMSKIEAERFELQRGVFDAREAVQAAMRLLRVQSDTAGVQLRGVLPPGELEVDA--DRRA 446 Query: 357 LMQIMLNVAGNSIKFT-KEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDT 533 L QI+LN+ N++KFT + G V++ A DG L + V DT Sbjct: 447 LKQIVLNLVSNALKFTPRGGQVTVTAH------------------GYDG--VLEIVVADT 486 Query: 534 GCGIRPEDMAHTFRKF 581 G GI PED+ R + Sbjct: 487 GVGISPEDLERLGRPY 502
>YCF26_PORPU (P51392) Hypothetical sensor-like histidine kinase ycf26 (EC| 2.7.13.3) Length = 656 Score = 64.7 bits (156), Expect = 2e-10 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 3/194 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETIL---KSSDFLATLTNDVL 179 +N F++ ++HE+RTP+ I + +E + K + L L NDVL Sbjct: 418 KNQFISNVSHELRTPLFNIRSFLETLYEYHDSLDDSQKLEFLAIANKETGRLTRLVNDVL 477 Query: 180 DISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLL 359 D+S+L + E + P DL + + + A KR+ + + + L C +G+ L+ Sbjct: 478 DLSRLESDQ-EYTLQPTDLVSAVEQTIRTYQLSAKDKRIDLHIDIEQNLQ-CVLGNYNLI 535 Query: 360 MQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGC 539 +QI+ N+ NS+KFT + I + D + + + S + V++ D G Sbjct: 536 LQILANLVVNSLKFTHPNGIIILRAYTVDDLKTETEVQHFN------SQKVRVEICDNGI 589 Query: 540 GIRPEDMAHTFRKF 581 GI ++ F +F Sbjct: 590 GISRKNQERIFARF 603
>TCSA_EMENI (Q9P896) Two-component system protein A (EC 2.7.13.3)| Length = 719 Score = 64.3 bits (155), Expect = 2e-10 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 8/195 (4%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 + DFLA ++HE+RTPM I EQ + S L + NDVLD S Sbjct: 301 KTDFLANISHEIRTPMNGIEIALTMLTDTGLSEEQG-DANIVQDSMSLLLQIVNDVLDYS 359 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVM------VSLAPELPACAIGDR 350 K L I LHA D+ ++ V R S+ ++P+L A A D Sbjct: 360 K-------LSIRLLSLHADMLDIREIVGAVVRNCRSSLQEGVELDTEISPKLHAHA-WDP 411 Query: 351 KLLMQIMLNVAGNSIKFTKEG--HVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQV 524 Q++ N+ GN++KFT++G HV I +S DS S + +V Sbjct: 412 LRYRQVLQNLVGNAVKFTEKGSIHVKITSSTDEEDS---------------DSSVVRTEV 456 Query: 525 KDTGCGIRPEDMAHT 569 DTG G+ + H+ Sbjct: 457 TDTGIGVPDSAINHS 471
>Y1002_RHIME (Q52969) Hypothetical sensor-like histidine kinase R01002 (EC| 2.7.13.3) Length = 525 Score = 57.4 bits (137), Expect = 3e-08 Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXA----EQRLMIETILKSSDFLATLTND 173 A+ FLA ++HE+RTP+ AI+ QR + I +S L ++ N Sbjct: 239 AKTRFLAAVSHELRTPLNAILGFSDVLAGEYFGKLENDRQREYVSLIHQSGTHLLSVVNT 298 Query: 174 VLDISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACK--RLSVMVSLAP-ELPACAIG 344 +LD+SK+ G EL + PF + ++ A K RL+ V+ + E+ A Sbjct: 299 MLDMSKIEAGRYELLLEPFRVAEAIAACEAMLSHQAREKGVRLTSRVTRSVGEINA---- 354 Query: 345 DRKLLMQIMLNVAGNSIKFTKEG 413 D++ QI++N+ GN+IKFT G Sbjct: 355 DQRAFQQILINLIGNAIKFTDRG 377
>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)| Length = 1220 Score = 55.1 bits (131), Expect = 1e-07 Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 A+ F+A ++HE+RTP+ I+ + R ++ I +S + L + ++L Sbjct: 566 AKTVFIANISHELRTPLNGILGMTAISMEETDVNKIRNSLKLIFRSGELLLHILTELLTF 625 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAI--GDRKLL 359 SK +L+ F + + ++ VA +R+ + +SL P L + GD + Sbjct: 626 SKNVLQRTKLEKRDFCITDVALQIKSIFGKVAKDQRVRLSISLFPNLIRTMVLWGDSNRI 685 Query: 360 MQIMLNVAGNSIKFT 404 +QI++N+ N++KFT Sbjct: 686 IQIVMNLVSNALKFT 700
>SENX3_MYCTU (P0A600) Sensor-like histidine kinase senX3 (EC 2.7.13.3)| Length = 410 Score = 54.7 bits (130), Expect = 2e-07 Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 2/194 (1%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQ-RLMIETILKSSDFLATLTNDVLD 182 AR DF+A ++HE++TP+ A+ +E R E +L ++ L + ++++ Sbjct: 157 ARRDFVANVSHELKTPVGAMALLAEALLASADDSETVRRFAEKVLIEANRLGDMVAELIE 216 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 +S+L ++ D+ ++ ++ K A + V L +GD+ LL+ Sbjct: 217 LSRLQGAERLPNMTDVDVDTIVSEAISRHKVAADNADIEVRTDAPSNLR--VLGDQTLLV 274 Query: 363 QIMLNVAGNSIKFTKEGH-VSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGC 539 + N+ N+I ++ G VSI+ R +N+ + V D G Sbjct: 275 TALANLVSNAIAYSPRGSLVSIS---------RRRRGANIE-----------IAVTDRGI 314 Query: 540 GIRPEDMAHTFRKF 581 GI PED F +F Sbjct: 315 GIAPEDQERVFERF 328
>SENX3_MYCBO (P0A601) Sensor-like histidine kinase senX3 (EC 2.7.13.3)| Length = 410 Score = 54.7 bits (130), Expect = 2e-07 Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 2/194 (1%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQ-RLMIETILKSSDFLATLTNDVLD 182 AR DF+A ++HE++TP+ A+ +E R E +L ++ L + ++++ Sbjct: 157 ARRDFVANVSHELKTPVGAMALLAEALLASADDSETVRRFAEKVLIEANRLGDMVAELIE 216 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 +S+L ++ D+ ++ ++ K A + V L +GD+ LL+ Sbjct: 217 LSRLQGAERLPNMTDVDVDTIVSEAISRHKVAADNADIEVRTDAPSNLR--VLGDQTLLV 274 Query: 363 QIMLNVAGNSIKFTKEGH-VSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGC 539 + N+ N+I ++ G VSI+ R +N+ + V D G Sbjct: 275 TALANLVSNAIAYSPRGSLVSIS---------RRRRGANIE-----------IAVTDRGI 314 Query: 540 GIRPEDMAHTFRKF 581 GI PED F +F Sbjct: 315 GIAPEDQERVFERF 328
>RESE_BACSU (P35164) Sensor protein resE (EC 2.7.13.3)| Length = 589 Score = 54.3 bits (129), Expect = 3e-07 Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 4/195 (2%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQ--RLMIETILKSSDFLATLTNDVLD 182 R DF+A ++HE+RTP+ + +E+ + + + I S + L ND+LD Sbjct: 365 REDFIANVSHELRTPISMLQGYSEAIVDDIASSEEDRKEIAQIIYDESLRMGRLVNDLLD 424 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVM--VSLAPELPACAIGDRKL 356 ++++ +G L +++ ++ VA K +++ +SL E + D Sbjct: 425 LARMESGHTGLHYEKINVNEFLEKIIRKFSGVAKEKNIALDHDISLTEEE---FMFDEDK 481 Query: 357 LMQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTG 536 + Q+ N+ N+++ T G S++ S+ H V DG L + +KD+G Sbjct: 482 MEQVFTNLIDNALRHTSAGG-SVSISV--------------HSV-KDG---LKIDIKDSG 522 Query: 537 CGIRPEDMAHTFRKF 581 GI ED+ F +F Sbjct: 523 SGIPEEDLPFIFERF 537
>KINB_PSEAE (O34206) Alginate biosynthesis sensor protein kinB (EC 2.7.13.3)| Length = 595 Score = 54.3 bits (129), Expect = 3e-07 Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 3/138 (2%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAI-VXXXXXXXXXXXXAEQRL--MIETILKSSDFLATLTNDVL 179 R++F+ +HE+RTP+ + + AE R +I+T+ + L L ND+L Sbjct: 376 RSEFVLRASHELRTPVTGMQMAFSLLRERLDFPAESREADLIQTVDEEMSRLVLLINDLL 435 Query: 180 DISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLL 359 + S+ G +L++A DL T P +R+S+ + L ELP + DR + Sbjct: 436 NFSRYQTGMQKLELASCDLVDLLTQAQQRFIPKGEARRVSLQLELGDELPRLQL-DRLQI 494 Query: 360 MQIMLNVAGNSIKFTKEG 413 +++ N+ N+++ + EG Sbjct: 495 ERVIDNLLENALRHSSEG 512
>YCLK_BACSU (P94414) Hypothetical sensor-like histidine kinase yclK (EC| 2.7.13.3) Length = 473 Score = 52.4 bits (124), Expect = 1e-06 Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 1/192 (0%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQR-LMIETILKSSDFLATLTNDVLDI 185 R F+A ++HE++TP+ I +++ I + + + L + LD Sbjct: 248 RRQFIADVSHELKTPLTTINGLVEGLNSHTIPEDKKDKCFSLISEETKRMLRLVKENLDY 307 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 K+ + + L+ L F V ++ A K+ +M+ + + A DR +Q Sbjct: 308 EKIRSQQITLNKLDVPLIEVFEIVKEHLQQQAEEKQNKLMIQVEDHVIVHADYDR--FIQ 365 Query: 366 IMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 I++N+ NSI+FT+ G + + +G +++++DTG GI Sbjct: 366 ILVNITKNSIQFTQNGDIWLRGM--------------------EGYKETIIEIEDTGIGI 405 Query: 546 RPEDMAHTFRKF 581 ED+ H + +F Sbjct: 406 PKEDIEHIWERF 417
>RSSA_SERMA (Q8GP19) Swarming motility regulation sensor protein rssA (EC| 2.7.13.3) Length = 469 Score = 52.4 bits (124), Expect = 1e-06 Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 7/183 (3%) Frame = +3 Query: 18 FLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLG 197 F+A HE+RTP+ A++ E+R +I + + D A+L+ +++++KL Sbjct: 242 FMADAAHELRTPIAAVLAQLHLLTQVTEQQERREIIGDMQQGLDRAASLSRQLINLAKLE 301 Query: 198 NGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQIMLN 377 L I D++A + P A K V +SL DR+ L+ I N Sbjct: 302 AEDFPLKIEAVDIYAEIGKCIAQHVPYALEK--DVELSLDGSEDVVVSTDRRALIAIFTN 359 Query: 378 VAGNSIKFTK-----EGHVSIAASIARPDSLRD--PYASNLHPVPSDGSFYLVVQVKDTG 536 + N++K+ E ++ A + +LRD P S H FY V + TG Sbjct: 360 LLDNALKYAPPGSRIEANIRSLAPLGCYITLRDNGPGVSEEHRSRLFERFYRVPGTQQTG 419 Query: 537 CGI 545 G+ Sbjct: 420 SGL 422
>SEX3_MYCLE (P54883) Sensor-like histidine kinase senX3 (EC 2.7.13.3)| Length = 443 Score = 52.0 bits (123), Expect = 1e-06 Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 1/193 (0%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQ-RLMIETILKSSDFLATLTNDVLD 182 AR DF+A ++HE++TP+ A+ AE E +L ++ L + ++++ Sbjct: 157 ARRDFVANVSHELKTPVGAMALLAEALLASADDAETVSRFAEKVLIEANRLGYMVAELIE 216 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 +S+L ++ D+ ++ + K A ++ V P +GD+ LL+ Sbjct: 217 LSRLQGAERLPNVTDIDVDIIVSEAIARHK--VAADTAAIEVRTDPPSGLRVLGDQTLLV 274 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 + N+ N+I ++ G + + R D++ + V D G G Sbjct: 275 TALANLVSNAIAYSPGGSLVSISRRRRGDNIE-------------------IAVTDRGIG 315 Query: 543 IRPEDMAHTFRKF 581 I ED F +F Sbjct: 316 IALEDQERVFERF 328
>BAES_ECOLI (P30847) Signal transduction histidine-protein kinase baeS (EC| 2.7.13.3) Length = 467 Score = 49.7 bits (117), Expect = 6e-06 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 3/166 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 R DF+A ++HE+RTP+ + ++ ET+ + TLT V D+ Sbjct: 241 RRDFMADISHELRTPLAVL----RGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLH 296 Query: 189 KLG---NGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLL 359 +L G+L AP DL + A + L + SL + GDR L Sbjct: 297 QLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFSLPDSITV--FGDRDRL 354 Query: 360 MQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSD 497 MQ+ N+ NS+++T G ++ R ++R +A + V D Sbjct: 355 MQLFNNLLENSLRYTDSGGSLQISAGQRDKTVRLTFADSAPGVSDD 400
>SPHS_SYNP7 (P39664) Sensor protein sphS (EC 2.7.13.3)| Length = 413 Score = 49.7 bits (117), Expect = 6e-06 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 1/136 (0%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 RN +++ + HE++TP+ +I E ++ ++ +L + L L D+L++S Sbjct: 170 RNRWVSDVAHELKTPLTSI-RLLAEALRDRLQDEPQVWVDRLLGETQRLGQLVQDLLELS 228 Query: 189 KLGNGSLELD-IAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 +L G L + DL A T V N ++P+A RL PE GDR+ L + Sbjct: 229 RLEQGPSGLQKLEAVDLVALLTSVRNSLEPLAEPLRLG-WAYQGPE-QGFVRGDRQRLFR 286 Query: 366 IMLNVAGNSIKFTKEG 413 + LN+ N+I+ + G Sbjct: 287 LWLNLVDNAIRHSPSG 302
>MTRB_MYCTU (Q50496) Sensor histidine kinase mtrB (EC 2.7.13.3)| Length = 567 Score = 49.7 bits (117), Expect = 6e-06 Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 2/190 (1%) Frame = +3 Query: 18 FLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSS--DFLATLTNDVLDISK 191 F + ++HE+RTP+ + + L T L S D TL ND+L+IS+ Sbjct: 299 FTSDVSHELRTPLTTVRMAADLIYDHSADLDPTLRRSTELMVSELDRFETLLNDLLEISR 358 Query: 192 LGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQIM 371 G EL + DL T + + + +A + ++V L E + D + + +I+ Sbjct: 359 HDAGVAELSVEAVDLRTTVNNALGNVGHLAEEAGIELLVDLPAEQVIAEV-DARRVERIL 417 Query: 372 LNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIRP 551 N+ N+I + V I + A D++ V V+D G G+RP Sbjct: 418 RNLIANAIDHAEHKPVRIRMA-ADEDTV-------------------AVTVRDYGVGLRP 457 Query: 552 EDMAHTFRKF 581 + F +F Sbjct: 458 GEEKLVFSRF 467
>MTRB_MYCBO (P59963) Sensor histidine kinase mtrB (EC 2.7.13.3)| Length = 567 Score = 49.7 bits (117), Expect = 6e-06 Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 2/190 (1%) Frame = +3 Query: 18 FLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSS--DFLATLTNDVLDISK 191 F + ++HE+RTP+ + + L T L S D TL ND+L+IS+ Sbjct: 299 FTSDVSHELRTPLTTVRMAADLIYDHSADLDPTLRRSTELMVSELDRFETLLNDLLEISR 358 Query: 192 LGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQIM 371 G EL + DL T + + + +A + ++V L E + D + + +I+ Sbjct: 359 HDAGVAELSVEAVDLRTTVNNALGNVGHLAEEAGIELLVDLPAEQVIAEV-DARRVERIL 417 Query: 372 LNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIRP 551 N+ N+I + V I + A D++ V V+D G G+RP Sbjct: 418 RNLIANAIDHAEHKPVRIRMA-ADEDTV-------------------AVTVRDYGVGLRP 457 Query: 552 EDMAHTFRKF 581 + F +F Sbjct: 458 GEEKLVFSRF 467
>PHYC_ARATH (P14714) Phytochrome C| Length = 1111 Score = 49.3 bits (116), Expect = 8e-06 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 1/135 (0%) Frame = +3 Query: 3 CARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLD 182 CA N LA + HE++ P KAI +Q+ ++ T + + LA + +D D Sbjct: 882 CALNK-LAYLRHEVKDPEKAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISD-SD 939 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAI-GDRKLL 359 I + G +ELD + F L + VV + ++ +++ + E+ + + GD L Sbjct: 940 IEGIEEGYVELDCSEFGLQESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRL 999 Query: 360 MQIMLNVAGNSIKFT 404 QI+ +SI+FT Sbjct: 1000 QQILSETLLSSIRFT 1014
>CHVG_AGRT5 (Q07737) Sensor protein chvG (EC 2.7.13.3)| Length = 596 Score = 48.1 bits (113), Expect = 2e-05 Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 6/198 (3%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 A F A ++HE++ P+ ++ ++ + E I L L +D+ D Sbjct: 357 AIESFAADVSHELKNPLTSLRSAVETLPRAKTEESKQRLTEIIFHDVRRLDRLISDISDA 416 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAI------GD 347 S+L D +P DL +V++ + ++ K+ SV + + A A G Sbjct: 417 SRLDAELARADASPLDLDVLMKGLVDISRQIST-KKKSVAIDYVADRKAGAKTSFVVNGH 475 Query: 348 RKLLMQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVK 527 + QI+ N+ N+ F E I ++R +VQV+ Sbjct: 476 DLRIGQIVTNLIENARSFVSEESGRITVRLSRHKDR------------------CIVQVE 517 Query: 528 DTGCGIRPEDMAHTFRKF 581 D G GI+ ED+ F +F Sbjct: 518 DNGPGIQAEDIDRIFERF 535
>MTRB_MYCPA (Q93CB7) Sensor histidine kinase mtrB (EC 2.7.13.3)| Length = 565 Score = 47.4 bits (111), Expect = 3e-05 Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 2/190 (1%) Frame = +3 Query: 18 FLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLM--IETILKSSDFLATLTNDVLDISK 191 F + ++HE+RTP+ + + L E ++ D +L ND+L+IS+ Sbjct: 299 FTSDVSHELRTPLTTVRMAADLIYDHSADLDPTLARSTELMVNELDRFESLLNDLLEISR 358 Query: 192 LGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQIM 371 G EL + DL +T ++ + +A + + V L E + R++ +I+ Sbjct: 359 HDAGVAELSVEAVDLRSTVQSALSNVGHLAEDAGIELQVELPAEEVIAEVDTRRV-ERIL 417 Query: 372 LNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIRP 551 N+ N+I + V I + A D++ V V+D G G+RP Sbjct: 418 RNLIANAIDHAEHKPVKIRMA-ADEDTV-------------------AVTVRDYGVGLRP 457 Query: 552 EDMAHTFRKF 581 + F +F Sbjct: 458 GEEKLVFSRF 467
>PHY_PICAB (Q40762) Phytochrome| Length = 1136 Score = 46.6 bits (109), Expect = 5e-05 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%) Frame = +3 Query: 21 LAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLGN 200 LA + E+R P+ I+ EQ+ +++T L + +D D+ + + Sbjct: 911 LAYIRQEIRNPLYGIIFTRKLMESTDLSEEQKQIVQTSALCQRQLVKVLDDA-DLESIED 969 Query: 201 GSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPA-CAIGDRKLLMQIMLN 377 G LELD F L VV+ ++ K L ++ E+ C GD+ L QI+ N Sbjct: 970 GYLELDTIEFTLGTVLDAVVSQGMILSREKGLQLIRDSPEEIKTMCLYGDQLRLQQILSN 1029 Query: 378 VAGNSIKF-TKEGHV 419 N+++F T EG V Sbjct: 1030 FLINALRFSTSEGWV 1044
>MTRB_MYCLE (Q9CCJ1) Sensor histidine kinase mtrB (EC 2.7.13.3)| Length = 562 Score = 45.8 bits (107), Expect = 9e-05 Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 2/190 (1%) Frame = +3 Query: 18 FLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSS--DFLATLTNDVLDISK 191 F + ++HE+RTP+ + + L T L S D TL ND+L+IS+ Sbjct: 299 FTSDVSHELRTPLTTVRMAADLIYDHSSDLDPTLRRSTELMVSELDRFETLLNDLLEISR 358 Query: 192 LGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQIM 371 G EL + DL + + + +A + ++V + P A D + + +I+ Sbjct: 359 HDAGVAELSVEAVDLRVMVNNALGNVGHLAEEAGIELLVDM-PVDEVIAEVDARRVERIL 417 Query: 372 LNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIRP 551 N+ N+I ++ V I + A D++ V V+D G G+RP Sbjct: 418 RNLIANAIDHSEHKPVRIRMA-ADEDTV-------------------AVTVRDYGIGLRP 457 Query: 552 EDMAHTFRKF 581 + F +F Sbjct: 458 GEEKLVFSRF 467
>TCSB_EMENI (Q9P4U6) Two-component system protein B precursor (EC 2.7.13.3) (NHK1| protein) (SLN1 homolog) Length = 1070 Score = 45.1 bits (105), Expect = 2e-04 Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 30/166 (18%) Frame = +3 Query: 18 FLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLG 197 F+A ++HE++TP+ I+ + ++T+ KS D L L ND+L S+ Sbjct: 546 FIANISHELKTPLNGILGMCAVCMGEDDLPRIKRSLQTVYKSGDLLLHLLNDLLTFSRNQ 605 Query: 198 -NGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLA-PELP-------------- 329 + ++ L+ F L + + + + K++S + P+ P Sbjct: 606 IDQAIRLEEKEFKLSDIRSQLQIIFQNQVQEKQISFSIKFCHPDTPPINDTPEVISRAPG 665 Query: 330 -------------ACAIGDRKLLMQIMLNVAGNSIKFTKE-GHVSI 425 GD+ ++QI++N+ GNS+KFT E G V+I Sbjct: 666 PVYGPPGTAKLKDMVLWGDQHRILQILINLVGNSLKFTPEQGTVAI 711
>PHYA_SOYBN (P42500) Phytochrome A| Length = 1131 Score = 43.9 bits (102), Expect = 3e-04 Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 2/147 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 R + L+ M ++R P+ IV EQ+ ++ T + L+ + +D D+ Sbjct: 902 RLNALSYMKRQIRNPLCGIVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDD-SDLD 960 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAI-GDRKLLMQ 365 + +G L+L++A F LH ++ + + K + ++ +A + + GD L Q Sbjct: 961 TIIDGYLDLEMAEFTLHEVLVTSLSQVMEKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQ 1020 Query: 366 IMLNVAGNSIKFTKE-GHVSIAASIAR 443 ++ + SI FT G V +A S+ + Sbjct: 1021 VLADFLLISINFTPNGGQVVVAGSLTK 1047
>SASA_SYNY3 (Q55630) Adaptive-response sensory-kinase sasA (EC 2.7.13.3)| Length = 383 Score = 43.9 bits (102), Expect = 3e-04 Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 8/149 (5%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKA--IVXXXXXXXXXXXXAEQRLMIETIL-----KSSDFLATLT 167 ++ LA++ H++R+P+ A I EQ+ + + L K + L Sbjct: 155 KDQILAMLAHDLRSPLTAASIAVDTLELLQHKPIEEQKPALRSQLLYQARKQFKIMDRLI 214 Query: 168 NDVLDISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGD 347 D+L SK N ++ P + +V+ L + + K L++ + +LP D Sbjct: 215 EDILQASKNLNSQFQVHGRPLAIADLCQEVLELYQAKFSKKNLTITYDIPKDLPN-VFAD 273 Query: 348 RKLLMQIMLNVAGNSIKFT-KEGHVSIAA 431 +L+ Q++ N+ N+IK+T G +++ A Sbjct: 274 EELIRQVIANLLDNAIKYTPAHGSITVGA 302
>CHVG_RHIME (P72292) Sensor protein chvG (EC 2.7.13.3) (Histidine kinase| sensory protein exoS) Length = 577 Score = 42.7 bits (99), Expect = 8e-04 Identities = 39/197 (19%), Positives = 74/197 (37%), Gaps = 5/197 (2%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 A +F A ++HE++ P+ ++ ++ +++ I L L +D+ D Sbjct: 340 AIENFAADVSHELKNPLTSLRSAVETLPLARNEESKKRLMDVIQHDVRRLDRLISDISDA 399 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLA-----PELPACAIGDR 350 S+L D DL D+V + + + K+ ++ + P G Sbjct: 400 SRLDAELARADAKKVDLEKLLGDLVEISRQIRGSKKPVLLDFVVDRKDNPRASFIVSGYE 459 Query: 351 KLLMQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKD 530 + QI+ N+ N+ F E + I + R +V V+D Sbjct: 460 LRIGQIITNLIENARSFVPEQNGRIVVRLTR------------------SRLRCIVYVED 501 Query: 531 TGCGIRPEDMAHTFRKF 581 G GI+ ED+ F +F Sbjct: 502 NGPGIQAEDIDRIFERF 518
>YYCG_BACSU (Q45614) Sensor protein yycG (EC 2.7.13.3)| Length = 611 Score = 42.7 bits (99), Expect = 8e-04 Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 9/200 (4%) Frame = +3 Query: 9 RNDFLAVMNHEMRTP---MKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVL 179 R +F+A ++HE+RTP M++ + R ++ T ++ + L ND+L Sbjct: 377 RREFVANVSHELRTPLTTMRSYLEALAEGAWENKDIAPRFLMVT-QNETERMIRLVNDLL 435 Query: 180 DISKLGNGSLELDIAPFDLHATFTDVVN----LIKPVAACKRLSV-MVSLAPELPACAIG 344 +SK D + + + +V +I K V + P+ Sbjct: 436 QLSK-------FDSKDYQFNREWIQIVRFMSLIIDRFEMTKEQHVEFIRNLPDRDLYVEI 488 Query: 345 DRKLLMQIMLNVAGNSIKFTKE-GHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQ 521 D+ + Q++ N+ N++K++ E GHV+ + + + L L + Sbjct: 489 DQDKITQVLDNIISNALKYSPEGGHVTFSIDVNEEEEL------------------LYIS 530 Query: 522 VKDTGCGIRPEDMAHTFRKF 581 VKD G GI +D+ F +F Sbjct: 531 VKDEGIGIPKKDVEKVFDRF 550
>PCOS_ECOLI (Q47457) Probable sensor protein pcoS (EC 2.7.13.3)| Length = 466 Score = 42.7 bits (99), Expect = 8e-04 Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 1/134 (0%) Frame = +3 Query: 12 NDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQ-RLMIETILKSSDFLATLTNDVLDIS 188 +DF + + HE+RTP+ ++ R ++ L+ L+ +T+D+L ++ Sbjct: 249 SDFSSDIAHELRTPVSNLMMQTQFALAKERDVSHYREILFANLEELKRLSRMTSDMLFLA 308 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 + +G L LD DL A ++ L +P+A ++ V E GD +L + Sbjct: 309 RSEHGLLRLDKHDVDLAAELNELRELFEPLADETGKTITV----EGEGVVAGDSDMLRRA 364 Query: 369 MLNVAGNSIKFTKE 410 N+ N+IK++ + Sbjct: 365 FSNLLSNAIKYSPD 378
>PHYA_PEA (P15001) Phytochrome A| Length = 1124 Score = 42.0 bits (97), Expect = 0.001 Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 2/155 (1%) Frame = +3 Query: 21 LAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLGN 200 L M ++R P+ IV EQ+ ++ T + L+ + +D D+ + + Sbjct: 899 LTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDD-SDLDGIID 957 Query: 201 GSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAI-GDRKLLMQIMLN 377 G L+L++A F LH ++ + + K + + +A + + GD L Q++ + Sbjct: 958 GYLDLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIARETLYGDSLRLQQVLAD 1017 Query: 378 VAGNSIKFTKE-GHVSIAASIARPDSLRDPYASNL 479 SI T G V IAAS+ + + + NL Sbjct: 1018 FLLISINSTPNGGQVVIAASLTKEQLGKSVHLVNL 1052
>PHOR_PSEAE (P23621) Phosphate regulon sensor protein phoR (EC 2.7.13.3)| Length = 443 Score = 41.6 bits (96), Expect = 0.002 Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 3/194 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLM--IETILKSSDFLATLTNDVLD 182 R DF+A ++HE+RTP+ I R + ++ + + + + L ND+L Sbjct: 210 RKDFVANVSHELRTPLTVIAGYLETLLDNVEDVNPRWLRALQQMQQQAGRMQNLLNDLLL 269 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 ++KL D P + A + N + ++A + + + AP + G L Sbjct: 270 LAKLEATDYPGDNKPVAVDALLASIRNDAQALSAGRNHRISLDAAPAVQ--LKGSEAELR 327 Query: 363 QIMLNVAGNSIKFT-KEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGC 539 N+ N++K+T EG + I D ++L V+DTG Sbjct: 328 SAFSNLVFNAVKYTPDEGEIRIR-------WWADEQGAHL-------------SVQDTGI 367 Query: 540 GIRPEDMAHTFRKF 581 G+ P+ + +F Sbjct: 368 GVDPKHLPRLTERF 381
>PHYA_LATSA (P93673) Phytochrome type A| Length = 1124 Score = 41.2 bits (95), Expect = 0.002 Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 2/155 (1%) Frame = +3 Query: 21 LAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLGN 200 L M ++R P+ IV EQ+ ++ T + L+ + +D D+ + + Sbjct: 899 LTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDD-SDLDGIID 957 Query: 201 GSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAI-GDRKLLMQIMLN 377 G L+L++A F LH ++ + + K + + +A + ++ GD L Q++ + Sbjct: 958 GYLDLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIAKESLYGDSLRLQQVLAD 1017 Query: 378 VAGNSIKFTKE-GHVSIAASIARPDSLRDPYASNL 479 SI T G V IA+S+ + + + NL Sbjct: 1018 FLLISINSTPNGGQVVIASSLTKEQLGKSVHLVNL 1052
>PHY1_SELMA (Q01549) Phytochrome 1| Length = 1134 Score = 41.2 bits (95), Expect = 0.002 Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 3/144 (2%) Frame = +3 Query: 21 LAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLGN 200 LA + E++ P+ I+ +Q+ +ET + + +D +D+ + + Sbjct: 899 LAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDD-MDLESIED 957 Query: 201 GSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAI-GDRKLLMQIMLN 377 G LELD F + V++ + K L ++ E+ A + GD+ L Q++ + Sbjct: 958 GYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQVLAD 1017 Query: 378 VAGNSIKFT--KEGHVSIAASIAR 443 N+I+FT E V I + +R Sbjct: 1018 FLLNAIRFTPSSENWVGIKVATSR 1041
>PHYA_ARATH (P14712) Phytochrome A| Length = 1122 Score = 41.2 bits (95), Expect = 0.002 Identities = 36/177 (20%), Positives = 77/177 (43%), Gaps = 2/177 (1%) Frame = +3 Query: 21 LAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLGN 200 LA + ++R P+ I+ EQR +++T L+ + +D D+ + Sbjct: 900 LAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDD-SDLESIIE 958 Query: 201 GSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAI-GDRKLLMQIMLN 377 G L+L++ F L+ T + + + K + + E+ + + GD L Q++ + Sbjct: 959 GCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLAD 1018 Query: 378 VAGNSIKFTKE-GHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGI 545 ++ FT G ++++AS+ + R + +NL +++ TG GI Sbjct: 1019 FMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLE-----------IRLTHTGAGI 1064
>BPHY_PSEAE (Q9HWR3) Probable bacteriophytochrome (EC 2.7.13.3)| (Phytochrome-like protein) Length = 728 Score = 39.3 bits (90), Expect = 0.009 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 5/133 (3%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 R +AV+ H++R P+++I + + + I SS + L + +LD+S Sbjct: 504 RQRLIAVLGHDLRNPLQSISMAAALLSSSDTRTTE--LRQHISASSSRMERLVSQILDMS 561 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPV-----AACKRLSVMVSLAPELPACAIGDRK 353 +L +G + L + P D TDV L++ + A L + +++ P++ A DR Sbjct: 562 RLQSG-IGLTVNPVD-----TDVSQLVRQIVCETDVAYPGLVIEIAIDPQVRAVVDPDR- 614 Query: 354 LLMQIMLNVAGNS 392 Q+ N+ N+ Sbjct: 615 -YAQVAANLLSNA 626
>SRRB_STAAN (Q7A5H7) Sensor protein srrB (EC 2.7.13.3) (Staphylococcal| respiratory response protein B) Length = 583 Score = 39.3 bits (90), Expect = 0.009 Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXA--EQRLMIETILKSSDFLATLTNDVLD 182 + DF+A ++HE+RTP+ + E + + +L S L L N++L+ Sbjct: 360 KKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAVVLDESKRLNRLVNELLN 419 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 ++++ L ++ + A + + A L++ + + DR + Sbjct: 420 VARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR--MD 477 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q++ N+ N+ ++TK G D A S+ Y +KDTG G Sbjct: 478 QVLTNLIDNASRYTKPG---------------DEIAITCDENESEDILY----IKDTGTG 518 Query: 543 IRPEDMAHTFRKF 581 I PE + F +F Sbjct: 519 IAPEHLQQVFDRF 531
>SRRB_STAAM (Q99TZ9) Sensor protein srrB (EC 2.7.13.3) (Staphylococcal| respiratory response protein B) Length = 583 Score = 39.3 bits (90), Expect = 0.009 Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXA--EQRLMIETILKSSDFLATLTNDVLD 182 + DF+A ++HE+RTP+ + E + + +L S L L N++L+ Sbjct: 360 KKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAVVLDESKRLNRLVNELLN 419 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 ++++ L ++ + A + + A L++ + + DR + Sbjct: 420 VARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR--MD 477 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q++ N+ N+ ++TK G D A S+ Y +KDTG G Sbjct: 478 QVLTNLIDNASRYTKPG---------------DEIAITCDENESEDILY----IKDTGTG 518 Query: 543 IRPEDMAHTFRKF 581 I PE + F +F Sbjct: 519 IAPEHLQQVFDRF 531
>SASA_PROMM (Q7V6P7) Adaptive-response sensory-kinase sasA (EC 2.7.13.3)| Length = 370 Score = 39.3 bits (90), Expect = 0.009 Identities = 28/136 (20%), Positives = 62/136 (45%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 A+ L ++ HE+RTP+ A V E + + + D + L+ D+L++ Sbjct: 145 AQERTLRMVAHELRTPLTAAVLALQSQQLGQINIEH--FQDVVKRRLDEIELLSKDLLEV 202 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 L + DL + + ++ + + + + + +LP D++ + Q Sbjct: 203 KSTKWEDL-FNPQNLDLGNIAAEAILELEKLWLDRNIEIRTDIPSDLPK-VFADQRRMRQ 260 Query: 366 IMLNVAGNSIKFTKEG 413 ++LN+ N++KFT++G Sbjct: 261 VLLNLLENALKFTEDG 276
>AFSQ2_STRCO (Q04943) Signal transduction histidine-protein kinase afsQ2 (EC| 2.7.13.3) Length = 535 Score = 39.3 bits (90), Expect = 0.009 Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 15/207 (7%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQ------------RLMIETILKSSD 149 A F+A M+HE+RTP+ A+ A + + ++ + Sbjct: 284 ASRRFVADMSHELRTPLTALTAVTEVLEEELEYAGEGEGEGGSFDPMVEPAVRLVVSETR 343 Query: 150 FLATLTNDVLDISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAAC---KRLSVMVSLAP 320 L L +++++++ G+ L + D V++ + AC + V L Sbjct: 344 RLNDLVENLMEVTRFDAGTARLVL----------DDVDVADQITACIDARAWLDAVDLDA 393 Query: 321 ELPACAIGDRKLLMQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDG 500 E A D + L I+ N+ GN++ K G + S+AR D Sbjct: 394 ERGVHARLDPRRLDVILANLIGNAL---KHGGSPVRVSVARAD----------------- 433 Query: 501 SFYLVVQVKDTGCGIRPEDMAHTFRKF 581 +V++V+D G GI + + H F +F Sbjct: 434 -HEIVIRVRDNGPGIPEDVLPHVFDRF 459
>SRRB_STAAW (Q8NWF3) Sensor protein srrB (EC 2.7.13.3) (Staphylococcal| respiratory response protein B) Length = 583 Score = 38.9 bits (89), Expect = 0.011 Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXA--EQRLMIETILKSSDFLATLTNDVLD 182 + DF+A ++HE+RTP+ + E + + +L S L L N++L+ Sbjct: 360 KKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVNELLN 419 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 ++++ L ++ + A + + A L++ + + DR + Sbjct: 420 VARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR--MD 477 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q++ N+ N+ ++TK G D A S+ Y +KDTG G Sbjct: 478 QVLTNLIDNASRYTKPG---------------DEIAITCDENESEDILY----IKDTGTG 518 Query: 543 IRPEDMAHTFRKF 581 I PE + F +F Sbjct: 519 IAPEHLQQVFDRF 531
>SRRB_STAAU (Q9L523) Sensor protein srrB (EC 2.7.13.3) (Staphylococcal| respiratory response protein B) Length = 583 Score = 38.9 bits (89), Expect = 0.011 Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXA--EQRLMIETILKSSDFLATLTNDVLD 182 + DF+A ++HE+RTP+ + E + + +L S L L N++L+ Sbjct: 360 KKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVNELLN 419 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 ++++ L ++ + A + + A L++ + + DR + Sbjct: 420 VARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR--MD 477 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q++ N+ N+ ++TK G D A S+ Y +KDTG G Sbjct: 478 QVLTNLIDNASRYTKPG---------------DEIAITCDENESEDILY----IKDTGTG 518 Query: 543 IRPEDMAHTFRKF 581 I PE + F +F Sbjct: 519 IAPEHLQQVFDRF 531
>SRRB_STAAS (Q6G973) Sensor protein srrB (EC 2.7.13.3) (Staphylococcal| respiratory response protein B) Length = 583 Score = 38.9 bits (89), Expect = 0.011 Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXA--EQRLMIETILKSSDFLATLTNDVLD 182 + DF+A ++HE+RTP+ + E + + +L S L L N++L+ Sbjct: 360 KKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVNELLN 419 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 ++++ L ++ + A + + A L++ + + DR + Sbjct: 420 VARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR--MD 477 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q++ N+ N+ ++TK G D A S+ Y +KDTG G Sbjct: 478 QVLTNLIDNASRYTKPG---------------DEIAITCDENESEDILY----IKDTGTG 518 Query: 543 IRPEDMAHTFRKF 581 I PE + F +F Sbjct: 519 IAPEHLQQVFDRF 531
>SRRB_STAAR (Q6GGK7) Sensor protein srrB (EC 2.7.13.3) (Staphylococcal| respiratory response protein B) Length = 583 Score = 38.9 bits (89), Expect = 0.011 Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXA--EQRLMIETILKSSDFLATLTNDVLD 182 + DF+A ++HE+RTP+ + E + + +L S L L N++L+ Sbjct: 360 KKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVNELLN 419 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 ++++ L ++ + A + + A L++ + + DR + Sbjct: 420 VARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWTYDMDR--MD 477 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q++ N+ N+ ++TK G D A S+ Y +KDTG G Sbjct: 478 QVLTNLIDNASRYTKPG---------------DEIAITCDENESEDILY----IKDTGTG 518 Query: 543 IRPEDMAHTFRKF 581 I PE + F +F Sbjct: 519 IAPEHLQQVFDRF 531
>SRRB_STAAC (Q5HFT1) Sensor protein srrB (EC 2.7.13.3) (Staphylococcal| respiratory response protein B) Length = 583 Score = 38.9 bits (89), Expect = 0.011 Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXA--EQRLMIETILKSSDFLATLTNDVLD 182 + DF+A ++HE+RTP+ + E + + +L S L L N++L+ Sbjct: 360 KKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVNELLN 419 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 ++++ L ++ + A + + A L++ + + DR + Sbjct: 420 VARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR--MD 477 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 Q++ N+ N+ ++TK G D A S+ Y +KDTG G Sbjct: 478 QVLTNLIDNASRYTKPG---------------DEIAITCDENESEDILY----IKDTGTG 518 Query: 543 IRPEDMAHTFRKF 581 I PE + F +F Sbjct: 519 IAPEHLQQVFDRF 531
>DIVL_CAUCR (Q9RQQ9) Sensor protein divL (EC 2.7.13.3)| Length = 769 Score = 38.9 bits (89), Expect = 0.011 Identities = 41/193 (21%), Positives = 81/193 (41%), Gaps = 2/193 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQ-RLMIETILKSSDFLATLTNDVLDI 185 + DF+ +++E+RTP+ I+ +E+ R + + ++ LA +DVLD+ Sbjct: 541 KRDFVGNVSYELRTPLTTIIGYSELLERADGISERGRNHVAAVRAAATQLARSIDDVLDM 600 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQ 365 +++ G + L+I + + A +++ V ++ GD K L Q Sbjct: 601 AQIDAGEMALEIEDIRVSDLLLNAQERALKDAQLGGVTLAVECEEDV-GLIRGDGKRLAQ 659 Query: 366 IMLNVAGNSIKFTKE-GHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 + ++ N+++ T G V+++A A + D V DTG G Sbjct: 660 TLDHLVENALRQTPPGGRVTLSARRALGEVRLD--------------------VSDTGRG 699 Query: 543 IRPEDMAHTFRKF 581 + AH F +F Sbjct: 700 VPFHVQAHIFDRF 712
>KDPD_MYCTU (P96372) Sensor protein kdpD (EC 2.7.13.3)| Length = 860 Score = 38.5 bits (88), Expect = 0.015 Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 4/149 (2%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPM---KAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVL 179 R L+ ++H++RTP+ K V + ++ TI +S D L L ++L Sbjct: 633 RRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQLTALVANLL 692 Query: 180 DISKLGNGSLELDIAPFDL-HATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKL 356 D S+L G + + L A +V++ K R + A A+ D L Sbjct: 693 DSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGDAVAMADAGL 752 Query: 357 LMQIMLNVAGNSIKFTKEGHVSIAASIAR 443 L +++ N+ N++++ + V + A R Sbjct: 753 LERVLANLIDNALRYAPDCVVRVNAGRVR 781
>NTRB_RHIME (Q52977) Nitrogen regulation protein ntrB (EC 2.7.13.3)| Length = 382 Score = 38.1 bits (87), Expect = 0.019 Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 3/189 (1%) Frame = +3 Query: 24 AVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLGNG 203 +++ HE++ P+ I E R + I +D + +L +D ++ + Sbjct: 146 SMLAHEIKNPLSGI-RGAAQLLETSVNDEDRSLTRLICDETDRIVSL----VDRMEVFSD 200 Query: 204 SLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQIMLNV- 380 +D P ++HA D V I +R+ + P LP +R L+Q+ LN+ Sbjct: 201 ERPVDRLPLNIHAVL-DHVKAIAKAGFARRIKISEHYDPSLPP-VFANRDQLVQVFLNLI 258 Query: 381 --AGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIRPE 554 A +I +G + + + RP +R A + S L V D G G+ P+ Sbjct: 259 KNAAEAIGDRADGEILLTTAY-RP-GIRLSVAGTREKI----SLPLEFCVHDNGPGVPPD 312 Query: 555 DMAHTFRKF 581 + H F F Sbjct: 313 LLPHLFDPF 321
>SASA_SYNPX (Q7U871) Adaptive-response sensory-kinase sasA (EC 2.7.13.3)| Length = 383 Score = 37.7 bits (86), Expect = 0.025 Identities = 29/143 (20%), Positives = 66/143 (46%), Gaps = 3/143 (2%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 A+ L ++ HE+RTP+ A + + I + + + L+ D+L++ Sbjct: 145 AQERLLRMVAHELRTPLTA--AALALQSQRLGQIDMTRFQDVITRRLEEMEALSKDLLEV 202 Query: 186 SKLGNGSLELDIAP--FDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLL 359 G E P DL + +V+ ++ + + + + + +LP D++ + Sbjct: 203 ---GTTRWETLFNPQRLDLASVSAEVILELEKLWLGRNVEIRTDIPSDLPK-VFADQRRM 258 Query: 360 MQIMLNVAGNSIKFT-KEGHVSI 425 Q++LN+ N++K+T GH+++ Sbjct: 259 RQVLLNLLENALKYTGNGGHITL 281
>VANS_ENTFA (Q47745) Sensor protein vanSB (EC 2.7.13.3) (Vancomycin B-type| resistance protein vanSB) (Vancomycin histidine protein kinase) Length = 447 Score = 36.6 bits (83), Expect = 0.055 Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 3/135 (2%) Frame = +3 Query: 18 FLAVMNHEMRTPMKAI-VXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKL 194 F A +HE++TP+ A+ V + + +K D +++L++ L Sbjct: 227 FFAAASHELKTPIAAVSVLLEGMLENIGDYKDHSKYLRECIKMMDRQGKTISEILELVSL 286 Query: 195 GNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPA--CAIGDRKLLMQI 368 +G + P D+ T +++ + +A + ++PA + D KL+ + Sbjct: 287 NDGRIVPIAEPLDIGRTVAELLPDFQTLAEANNQRFVT----DIPAGQIVLSDPKLIQKA 342 Query: 369 MLNVAGNSIKFTKEG 413 + NV N+++ T +G Sbjct: 343 LSNVILNAVQNTPQG 357
>KDPD_ECOLI (P21865) Sensor protein kdpD (EC 2.7.13.3)| Length = 894 Score = 35.8 bits (81), Expect = 0.094 Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 7/199 (3%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPM-----KAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTND 173 RN LA ++H++RTP+ +A + A Q I + ++ L N+ Sbjct: 664 RNALLAALSHDLRTPLTVLFGQAEILTLDLASEGSPHARQASEIRQHVLNT---TRLVNN 720 Query: 174 VLDISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIG-DR 350 +LD++++ +G L L + +++P LS ++L+ P I D Sbjct: 721 LLDMARIQSGGFNLKKEWLTLEEVVGSALQMLEP-----GLSSPINLSLPEPLTLIHVDG 775 Query: 351 KLLMQIMLNVAGNSIKFT-KEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVK 527 L ++++N+ N++K+ + + I A + + L + V Sbjct: 776 PLFERVLINLLENAVKYAGAQAEIGIDAHVEGEN--------------------LQLDVW 815 Query: 528 DTGCGIRPEDMAHTFRKFA 584 D G G+ P F KFA Sbjct: 816 DNGPGLPPGQEQTIFDKFA 834
>RPRX_BACFR (Q08408) Sensor protein rprX (EC 2.7.13.3)| Length = 519 Score = 35.4 bits (80), Expect = 0.12 Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 3/194 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIE---TILKSSDFLATLTNDVL 179 +NDF+ M HE +TP+ I ++ I + L VL Sbjct: 290 KNDFINNMTHEFKTPISTISLAAQMLKDPAVGKSPQMFQHISGVINDETKRLRFQVEKVL 349 Query: 180 DISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLL 359 +S L + D + T V+N + +L P D + Sbjct: 350 QMSMFDRQKATLKMKELDANELITGVINTFALKVERYNGKITSNLEATNPVI-FADEMHI 408 Query: 360 MQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGC 539 ++ N+ N++K+ K + N+ G L++ ++D G Sbjct: 409 TNVIFNLMDNAVKYKKP---------------EEDLVLNVRTWNEPGK--LMISIQDNGI 451 Query: 540 GIRPEDMAHTFRKF 581 GI+ E++ F KF Sbjct: 452 GIKKENLKKVFDKF 465
>PRRB_MYCLE (O33071) Sensor-type histidine kinase prrB (EC 2.7.13.3)| Length = 446 Score = 35.4 bits (80), Expect = 0.12 Identities = 43/194 (22%), Positives = 74/194 (38%), Gaps = 4/194 (2%) Frame = +3 Query: 15 DFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQR--LMIETILKSSDFLATLTNDVLDIS 188 DF AV +HE+RTP+ A+ +QR ++ + I S ATL+ + Sbjct: 233 DFAAVSSHELRTPLTAMRTNLEVLATLDLADDQRKEVLGDVIRTQSRIEATLS----ALE 288 Query: 189 KLGNGSLEL--DIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 +L G L D P D+ T++++ A + VSL P +G L Sbjct: 289 RLAQGELSTSDDHVPVDI----TELLDRAAHDATRSYPELKVSLVPSPTCIIVGLPAGLR 344 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCG 542 + N N++K V ++A +R + + V D G G Sbjct: 345 LAVDNAVANAVKHGGATRVQLSAVSSRAG--------------------VEIAVDDNGSG 384 Query: 543 IRPEDMAHTFRKFA 584 + ++ F +F+ Sbjct: 385 VPEDERQVVFERFS 398
>YKOH_BACSU (O34638) Hypothetical sensor-like histidine kinase ykoH (EC| 2.7.13.3) Length = 454 Score = 35.4 bits (80), Expect = 0.12 Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 3/194 (1%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRL--MIETILKSSDFLATLTNDVLD 182 + F+ +HE++TP+ I + L IE I + + LTN +L Sbjct: 232 QQQFVQDASHELKTPLTIIESYSSLMKRWGAKKPEVLEESIEAIHSEAVHMKKLTNQLLA 291 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 ++K G LE+D+ DL V+ ++ V + +++ E D + + Sbjct: 292 LAKSHQG-LEVDLKTIDLIKAARAVMQTLQSVY---QRDILLETDKE-SLLVKADEERIK 346 Query: 363 QIMLNVAGNSIKFTKEG-HVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGC 539 Q++ + N+IK++++ +S RP + V+D G Sbjct: 347 QLLTILLDNAIKYSEKPIEMSAGTRNGRP----------------------FLSVRDEGI 384 Query: 540 GIRPEDMAHTFRKF 581 GI E + H F +F Sbjct: 385 GIPEEHIPHLFERF 398
>ATOS_ECOLI (Q06067) Signal transduction histidine-protein kinase atoS (EC| 2.7.13.3) Length = 608 Score = 35.0 bits (79), Expect = 0.16 Identities = 27/128 (21%), Positives = 56/128 (43%) Frame = +3 Query: 15 DFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKL 194 + +A + HE+R P+ AI + + +LK D + + +L+ S+ Sbjct: 391 ELMAGVAHEVRNPLTAIRGYVQILRQQTSDPIHQEYLSVVLKEIDSINKVIQQLLEFSRP 450 Query: 195 GNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQIML 374 + + L+A + + L++ R+ + L EL DR+LL Q++L Sbjct: 451 RHSQWQ----QVSLNALVEETLVLVQTAGVQARVDFISELDNELSPIN-ADRELLKQVLL 505 Query: 375 NVAGNSIK 398 N+ N+++ Sbjct: 506 NILINAVQ 513
>KDPD_CLOAB (P94608) Sensor protein kdpD (EC 2.7.13.3)| Length = 900 Score = 34.7 bits (78), Expect = 0.21 Identities = 26/138 (18%), Positives = 62/138 (44%), Gaps = 3/138 (2%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRL---MIETILKSSDFLATLTNDVL 179 R++ L ++H++R+P+ I +++ +I I + +++L L ++L Sbjct: 677 RSNLLRSISHDLRSPLAGIKGAASTILENGELIDEKRKQELINGIYEDTEWLIRLIENLL 736 Query: 180 DISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLL 359 ++K G+ ++ + ++ V ++ V V PE D L+ Sbjct: 737 SMTKFDEGNTKIKKDVELVEEVVSEAVQRSSKYFKNHKIKVSV---PEDVIMVSMDGSLI 793 Query: 360 MQIMLNVAGNSIKFTKEG 413 Q+++N+ N+ KF+ +G Sbjct: 794 EQVIINLLDNASKFSPKG 811
>YFHK_ECOLI (P52101) Putative sensor-like histidine kinase yfhK (EC 2.7.13.3)| Length = 496 Score = 34.3 bits (77), Expect = 0.27 Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 5/148 (3%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAI---VXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVL 179 R+ FL ++HE++TP+ ++ EQ+ ++ + SS L L +L Sbjct: 271 RHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLL 330 Query: 180 DIS-KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKL 356 D + K + ++EL+ +L VV+ A K + V L + AC + + L Sbjct: 331 DYNRKQADSAVELE--NVELAPLVETVVSAHSLPARAKMMHTDVDL--KATAC-LAEPML 385 Query: 357 LMQIMLNVAGNSIKFTKE-GHVSIAASI 437 LM ++ N+ N++ + E G++ + +S+ Sbjct: 386 LMSVLDNLYSNAVHYGAESGNICLRSSL 413
>PRRB_MYCTU (P0A5Z8) Sensor-type histidine kinase prrB (EC 2.7.13.3)| Length = 446 Score = 33.9 bits (76), Expect = 0.36 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 4/147 (2%) Frame = +3 Query: 15 DFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQR--LMIETILKSSDFLATLTNDVLDIS 188 DF AV +HE+RTP+ A+ +QR ++ + I S ATL+ + Sbjct: 233 DFAAVSSHELRTPLTAMRTNLEVLSTLDLPDDQRKEVLNDVIRTQSRIEATLS----ALE 288 Query: 189 KLGNGSLEL--DIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 +L G L D P D+ TD+++ AA + VSL P +G L Sbjct: 289 RLAQGELSTSDDHVPVDI----TDLLDRAAHDAARIYPDLDVSLVPSPTCIIVGLPAGLR 344 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIAR 443 + N N++K V ++A +R Sbjct: 345 LAVDNAIANAVKHGGATLVQLSAVSSR 371
>PRRB_MYCBO (P0A5Z9) Sensor-type histidine kinase prrB (EC 2.7.13.3)| Length = 446 Score = 33.9 bits (76), Expect = 0.36 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 4/147 (2%) Frame = +3 Query: 15 DFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQR--LMIETILKSSDFLATLTNDVLDIS 188 DF AV +HE+RTP+ A+ +QR ++ + I S ATL+ + Sbjct: 233 DFAAVSSHELRTPLTAMRTNLEVLSTLDLPDDQRKEVLNDVIRTQSRIEATLS----ALE 288 Query: 189 KLGNGSLEL--DIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLM 362 +L G L D P D+ TD+++ AA + VSL P +G L Sbjct: 289 RLAQGELSTSDDHVPVDI----TDLLDRAAHDAARIYPDLDVSLVPSPTCIIVGLPAGLR 344 Query: 363 QIMLNVAGNSIKFTKEGHVSIAASIAR 443 + N N++K V ++A +R Sbjct: 345 LAVDNAIANAVKHGGATLVQLSAVSSR 371
>YEDV_ECOLI (P76339) Putative sensor-like histidine kinase yedV (EC 2.7.13.3)| Length = 452 Score = 33.1 bits (74), Expect = 0.61 Identities = 23/134 (17%), Positives = 65/134 (48%), Gaps = 1/134 (0%) Frame = +3 Query: 12 NDFLAVMNHEMRTPMKAIV-XXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 + F + HE+RTP+ A++ AE + I ++ + ++ LT ++L ++ Sbjct: 237 SQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIAGNIEELENISRLTENILFLA 296 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 + ++ + + L+ ++++ ++ ++ K + V ++ D+ LL ++ Sbjct: 297 RADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICFKVECNQQI----FADKILLQRM 352 Query: 369 MLNVAGNSIKFTKE 410 + N+ N+I+++ E Sbjct: 353 LSNLIVNAIRYSPE 366
>VIRA_AGRT9 (P10799) Wide host range virA protein (EC 2.7.13.3) (WHR virA)| Length = 829 Score = 32.7 bits (73), Expect = 0.80 Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 1/157 (0%) Frame = +3 Query: 114 RLMIETILKSSDFLATLTNDVLDISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKR 293 R I+ I+ S D + + +L +S+ E I PF + T++ L++ +A Sbjct: 501 RRYIDYIISSGDRAMLIIDQILTLSR----KQERMIKPFSVSELVTEIAPLLR-MALPPN 555 Query: 294 LSVMVSLAPELPACAIGDRKLLMQIMLNVAGNSIK-FTKEGHVSIAASIARPDSLRDPYA 470 + + ++ + G L Q+++N+ N+ + T G + I S A ++ A Sbjct: 556 IELSFRF-DQMQSVIEGSPLELQQVLINICKNASQAMTANGQIDIIISQAFLP-VKKILA 613 Query: 471 SNLHPVPSDGSFYLVVQVKDTGCGIRPEDMAHTFRKF 581 + P P D Y+++ + D G GI + H F F Sbjct: 614 HGVMP-PGD---YVLLSISDNGGGIPEAVLPHIFEPF 646
>VIRAW_AGRTU (P07168) Wide host range virA protein (EC 2.7.13.3) (WHR virA)| Length = 829 Score = 32.7 bits (73), Expect = 0.80 Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 1/157 (0%) Frame = +3 Query: 114 RLMIETILKSSDFLATLTNDVLDISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKR 293 R I+ I+ S D + + +L +S+ E I PF + T++ L++ +A Sbjct: 501 RRYIDYIISSGDRAMLIIDQILTLSR----KQERMIKPFSVSELVTEIAPLLR-MALPPN 555 Query: 294 LSVMVSLAPELPACAIGDRKLLMQIMLNVAGNSIK-FTKEGHVSIAASIARPDSLRDPYA 470 + + ++ + G L Q+++N+ N+ + T G + I S A ++ A Sbjct: 556 IELSFRF-DQMQSVIEGSPLELQQVLINICKNASQAMTANGQIDIIISQAFLP-VKKILA 613 Query: 471 SNLHPVPSDGSFYLVVQVKDTGCGIRPEDMAHTFRKF 581 + P P D Y+++ + D G GI + H F F Sbjct: 614 HGVMP-PGD---YVLLSISDNGGGIPEAVLPHIFEPF 646
>PHYB_ANASP (Q9R6X3) Cyanobacterial phytochrome B (EC 2.7.13.3)| Length = 751 Score = 32.3 bits (72), Expect = 1.0 Identities = 40/191 (20%), Positives = 80/191 (41%), Gaps = 3/191 (1%) Frame = +3 Query: 18 FLAVMNHEMRTPMKAIVXXXXXXXXXXXX---AEQRLMIETILKSSDFLATLTNDVLDIS 188 F + +H+++ P++ I A + + T+++ + + L + +L S Sbjct: 533 FAYIASHDLKEPLRGIHNYSNFLMEDYGEIIDAPGKEKLLTLIRLTQRMEDLIDSLLHFS 592 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 +LG ++L + DL+ +++++ + V + + LP DR + ++ Sbjct: 593 RLGR--VDLSMQDTDLNEIVHRILDMLS--GRIEETGVEIRILQLLPVVYC-DRIQIGEV 647 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIR 548 N+ NSIK+ + + I Y N P+P +FY V+D G GIR Sbjct: 648 FSNLIANSIKYNDKANKWIEIG----------YIDN-PPLPP--TFY----VRDNGIGIR 690 Query: 549 PEDMAHTFRKF 581 + FR F Sbjct: 691 EKHFETIFRIF 701
>PHY1_SYNY3 (Q55168) Phytochrome-like protein cph1 (EC 2.7.13.3)| (Light-regulated histidine kinase 1) (Bacteriophytochrome cph1) Length = 748 Score = 32.3 bits (72), Expect = 1.0 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 7/135 (5%) Frame = +3 Query: 18 FLAVMNHEMRTPMKAI---VXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 F + +H+++ P+ + V + + I+ + + TL +D+L + Sbjct: 532 FAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYA 591 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAP----ELPACAIGDRKL 356 K+ +L TFTDV ++ A + + S A +PA + D+ Sbjct: 592 KVDTQYAQL---------TFTDVQEVVDKALANLKQRIEESGAEIEVGSMPA-VMADQIQ 641 Query: 357 LMQIMLNVAGNSIKF 401 LMQ+ N+ N IKF Sbjct: 642 LMQVFQNLIANGIKF 656
>SASA_PROMA (Q7BWI3) Adaptive-response sensory-kinase sasA (EC 2.7.13.3)| Length = 381 Score = 32.0 bits (71), Expect = 1.4 Identities = 32/184 (17%), Positives = 74/184 (40%) Frame = +3 Query: 21 LAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLGN 200 L ++ HE+RTP+ A + + E + + + + +L+ D+L++ Sbjct: 152 LRMVAHELRTPLSA--AKLALQSQALGQIDLIKLQEVVKRRLEEIESLSKDLLEVGTTRW 209 Query: 201 GSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQIMLNV 380 +L + +L +V+ ++ + + + + +LP D+ + Q++LN+ Sbjct: 210 EAL-FNPQEANLANIAAEVILELEKFWLSRGIGINTDIPADLPN-VFADQSRMKQVLLNL 267 Query: 381 AGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIRPEDM 560 N++KF+ +G + R + ++ + V D G GI E+ Sbjct: 268 IENALKFSNDGDTVEITMLHRTNQ------------------WVQISVSDKGPGIPEEEQ 309 Query: 561 AHTF 572 F Sbjct: 310 QRIF 313
>THIKB_RAT (P07871) 3-ketoacyl-CoA thiolase B, peroxisomal precursor (EC| 2.3.1.16) (Beta-ketothiolase B) (Acetyl-CoA acyltransferase B) (Peroxisomal 3-oxoacyl-CoA thiolase B) Length = 424 Score = 31.2 bits (69), Expect = 2.3 Identities = 20/73 (27%), Positives = 34/73 (46%) Frame = -3 Query: 454 NESGLAMEAAIET*PSFVNLIELPATFSIICISSLRSPIAQAGNSGAKETITESLLHAAT 275 +ES A++AA P + A+ ++ + R+PI +AG G K+T + LL A Sbjct: 15 SESSSALQAA----PCSAGFPQASAS-DVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVL 69 Query: 274 GLIKLTTSVKVAC 236 + +K C Sbjct: 70 TAVLQDVKLKPEC 82
>PHYB_SORBI (P93527) Phytochrome B| Length = 1178 Score = 31.2 bits (69), Expect = 2.3 Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 5/127 (3%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDI 185 AR LA + E++ P+ I +QR +ET + ++ + D + Sbjct: 943 ARMKELAYICQEIKNPLSGIRFTNSLLQMTDLNDDQRQFLETCSACEEQMSKIVKDA-TL 1001 Query: 186 SKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELP-----ACAIGDR 350 + +GSL L+ + F +F DV+N + A + L ++P A A GD+ Sbjct: 1002 QSIEDGSLVLEKSEF----SFGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQ 1057 Query: 351 KLLMQIM 371 + Q++ Sbjct: 1058 FRIQQVL 1064
>THIKA_RAT (P21775) 3-ketoacyl-CoA thiolase A, peroxisomal precursor (EC| 2.3.1.16) (Beta-ketothiolase A) (Acetyl-CoA acyltransferase A) (Peroxisomal 3-oxoacyl-CoA thiolase A) Length = 424 Score = 30.8 bits (68), Expect = 3.0 Identities = 20/72 (27%), Positives = 33/72 (45%) Frame = -3 Query: 451 ESGLAMEAAIET*PSFVNLIELPATFSIICISSLRSPIAQAGNSGAKETITESLLHAATG 272 ES A++AA P + A+ ++ + R+PI +AG G K+T + LL A Sbjct: 16 ESSSALQAA----PCSATFPQASAS-DVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLT 70 Query: 271 LIKLTTSVKVAC 236 + +K C Sbjct: 71 AVLQDVKLKPEC 82
>CIAH_STRR6 (P0A4I6) Sensor protein ciaH (EC 2.7.13.3)| Length = 444 Score = 30.8 bits (68), Expect = 3.0 Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 6/197 (3%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLAT---LTNDVL 179 + F+ +HE+RTP+ A++ A + E+I S + + LT +L Sbjct: 217 QQSFVENASHELRTPL-AVLQNRLETLFRKPEATIMDVSESIASSLEEVRNMRFLTTSLL 275 Query: 180 DISKLGNG-SLELDIAPFDL-HATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRK 353 ++++ +G EL P + TFT+ + R + + D+ Sbjct: 276 NLARRDDGIKPELAEVPTSFFNTTFTNYEMIASENNRVFRFENRIHRT------IVTDQL 329 Query: 354 LLMQIMLNVAGNSIKFTKE-GHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKD 530 LL Q+M + N++K+T+E G + S +D + YL+ V D Sbjct: 330 LLKQLMTILFDNAVKYTEEDGEIDFLIS------------------ATDRNLYLL--VSD 369 Query: 531 TGCGIRPEDMAHTFRKF 581 G GI ED F +F Sbjct: 370 NGIGISTEDKKKIFDRF 386
>CIAH_STRPN (P0A4I5) Sensor protein ciaH (EC 2.7.13.3)| Length = 444 Score = 30.8 bits (68), Expect = 3.0 Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 6/197 (3%) Frame = +3 Query: 9 RNDFLAVMNHEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLAT---LTNDVL 179 + F+ +HE+RTP+ A++ A + E+I S + + LT +L Sbjct: 217 QQSFVENASHELRTPL-AVLQNRLETLFRKPEATIMDVSESIASSLEEVRNMRFLTTSLL 275 Query: 180 DISKLGNG-SLELDIAPFDL-HATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRK 353 ++++ +G EL P + TFT+ + R + + D+ Sbjct: 276 NLARRDDGIKPELAEVPTSFFNTTFTNYEMIASENNRVFRFENRIHRT------IVTDQL 329 Query: 354 LLMQIMLNVAGNSIKFTKE-GHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKD 530 LL Q+M + N++K+T+E G + S +D + YL+ V D Sbjct: 330 LLKQLMTILFDNAVKYTEEDGEIDFLIS------------------ATDRNLYLL--VSD 369 Query: 531 TGCGIRPEDMAHTFRKF 581 G GI ED F +F Sbjct: 370 NGIGISTEDKKKIFDRF 386
>IL1B_HORSE (Q28386) Interleukin-1 beta precursor (IL-1 beta)| Length = 268 Score = 29.6 bits (65), Expect = 6.7 Identities = 26/101 (25%), Positives = 44/101 (43%) Frame = +3 Query: 177 LDISKLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKL 356 LD+S +G+G ++L + + TF +++I V K++ V P A D + Sbjct: 38 LDLSSMGDGGIQLQFSHHLYNKTFKHAMSIIVAVEKLKKIPV-----PCSQAFQDDDLRS 92 Query: 357 LMQIMLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNL 479 L ++ EG+V AA + LRD Y +L Sbjct: 93 LFSVIFEEEPIICDNWDEGYVCDAAMHSVNCRLRDIYHKSL 133
>PHOR_ECOLI (P08400) Phosphate regulon sensor protein phoR (EC 2.7.13.3)| Length = 431 Score = 29.6 bits (65), Expect = 6.7 Identities = 42/200 (21%), Positives = 76/200 (38%), Gaps = 8/200 (4%) Frame = +3 Query: 6 ARNDFLAVMNHEMRTPMKAIVXXXXXXXXX-XXXAEQRLMIETILKSSDFLATLTNDVLD 182 AR +F A ++HE+RTP+ + A + + T+ + + + L +L Sbjct: 203 ARRNFFANVSHELRTPLTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLT 262 Query: 183 ISKLGNGSLELDIAPFDLHATFTDVVNLIKPV------AACKRLSVMVSLAPELPACAIG 344 +SK ++ AP L DV +++ V + K+ + + L G Sbjct: 263 LSK-------IEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVS--G 313 Query: 345 DRKLLMQIMLNVAGNSIKFTKEG-HVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQ 521 + L + N+ N++ T EG H+++ VP F Sbjct: 314 NEDQLRSAISNLVYNAVNHTPEGTHITV----------------RWQRVPHGAEF----S 353 Query: 522 VKDTGCGIRPEDMAHTFRKF 581 V+D G GI PE + +F Sbjct: 354 VEDNGPGIAPEHIPRLTERF 373
>PHYA_ANASP (Q9LCC2) Cyanobacterial phytochrome A (EC 2.7.13.3)| Length = 765 Score = 29.6 bits (65), Expect = 6.7 Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 3/182 (1%) Frame = +3 Query: 18 FLAVMNHEMRTPMKAI---VXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDIS 188 F V +H+++ P+ + V A+ I ++ + TL +DVL S Sbjct: 532 FAYVASHDLQEPLNQVANYVQLLEMRYQDQLDADANEFITFAVEGVSLMQTLIDDVLAYS 591 Query: 189 KLGNGSLELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQI 368 K+ ++ + + A + NL + +A ++ P LP G +L MQ+ Sbjct: 592 KVDTQAIAFQLTEVE-KALDKALGNLRQRIA---ETGANITHDP-LPTVMAGSTQL-MQL 645 Query: 369 MLNVAGNSIKFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIR 548 N+ N+IKF E I R L D + + V+D G GI Sbjct: 646 FQNLIANAIKFRSEEAPQIHIGAER---LEDEW---------------LFSVRDNGIGID 687 Query: 549 PE 554 P+ Sbjct: 688 PQ 689
>R1AB_CVM2 (Q9PYA3) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44); 3C-like proteinase ( Length = 7124 Score = 29.6 bits (65), Expect = 6.7 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +3 Query: 489 PSDGSFYLVVQVKDTGCGIR 548 P+D ++YLV +VK GC +R Sbjct: 2504 PTDSAYYLVTEVKQVGCSMR 2523
>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2318 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +2 Query: 329 CLCNWRSQATDADNAKCCWQLN*VHKGGSCFN 424 C W Q D +C Q N H GG+CFN Sbjct: 263 CPPEWTGQFCTEDVDECQLQPNACHNGGTCFN 294
>QSEC_HAEIN (P45336) Sensor protein qseC (EC 2.7.13.3)| Length = 451 Score = 29.3 bits (64), Expect = 8.8 Identities = 38/186 (20%), Positives = 75/186 (40%), Gaps = 4/186 (2%) Frame = +3 Query: 36 HEMRTPMKAI---VXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLGNGS 206 HE+R+P+ A+ + EQ L+ T + D + L +L +S+L N Sbjct: 244 HELRSPLAALRIQIEVAQLAGDDVALREQALLHLT--QGIDRASQLIEQLLTLSRLDNLQ 301 Query: 207 LELDIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQIMLNVAG 386 + D A +++ VA ++++++ E P G L+ ++ N+ Sbjct: 302 ALETLQLLDWEAIVQSLISERYFVAEKRKITLVFEKESE-PKQKQGQSILVSLMLRNLLD 360 Query: 387 NSIKFTKEGH-VSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIRPEDMA 563 N+IK+ E VS+ S ++ + ++D G G+ PED+ Sbjct: 361 NAIKYCPEDTIVSVKISSSQ------------------------IIIEDNGGGVEPEDLK 396 Query: 564 HTFRKF 581 ++F Sbjct: 397 KLGQRF 402
>RSTB_ECOLI (P18392) Sensor protein rstB (EC 2.7.13.3)| Length = 433 Score = 29.3 bits (64), Expect = 8.8 Identities = 37/182 (20%), Positives = 70/182 (38%) Frame = +3 Query: 36 HEMRTPMKAIVXXXXXXXXXXXXAEQRLMIETILKSSDFLATLTNDVLDISKLGNGSLEL 215 HE+RTP+ + Q L + L L ++L ++L EL Sbjct: 221 HELRTPLVRLRYRLEMSDNLSAAESQALN-----RDISQLEALIEELLTYARLDRPQNEL 275 Query: 216 DIAPFDLHATFTDVVNLIKPVAACKRLSVMVSLAPELPACAIGDRKLLMQIMLNVAGNSI 395 ++ DL + + I+ V K + + + A D +L+ +++ N+ N++ Sbjct: 276 HLSEPDLPLWLSTHLADIQAVTPDKTVRIKTLVQGHYAAL---DMRLMERVLDNLLNNAL 332 Query: 396 KFTKEGHVSIAASIARPDSLRDPYASNLHPVPSDGSFYLVVQVKDTGCGIRPEDMAHTFR 575 ++ H ++ S+ + S L+V+ D G GI PE+ H F Sbjct: 333 RYC---HSTVETSL----------------LLSGNRATLIVE--DDGPGIAPENREHIFE 371 Query: 576 KF 581 F Sbjct: 372 PF 373
>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2319 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +2 Query: 329 CLCNWRSQATDADNAKCCWQLN*VHKGGSCFN 424 C W Q D +C Q N H GG+CFN Sbjct: 264 CPPEWTGQFCTEDVDECQLQPNACHNGGTCFN 295
>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2321 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +2 Query: 329 CLCNWRSQATDADNAKCCWQLN*VHKGGSCFN 424 C W Q D +C Q N H GG+CFN Sbjct: 262 CPPEWTGQFCTEDVDECQLQPNACHNGGTCFN 293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,316,865 Number of Sequences: 219361 Number of extensions: 1781091 Number of successful extensions: 4241 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 4088 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4188 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
