>LEU3_THIFE (Q56268) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 358

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 324 DEGGRLALAPAVLPVREVGVGRRQL-PVHGSRPDLS 220
           DE  +L  +  +LP   +G GR    P+HGS PD++
Sbjct: 250 DEASQLTGSIGMLPSASLGEGRAMYEPIHGSAPDIA 285

>UPP_NOCFA (Q5Z187) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP|
           pyrophosphorylase) (UPRTase)
          Length = 207

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 381 LRLAKVAAVEVDVPRPPGVDEGGRLALAPAVLPVREVGVG 262
           LR A V   E++ P  P    G RLA  P ++PV   G+G
Sbjct: 44  LREAPVDTYEINTPVAPAT--GARLAQPPLLVPVLRAGLG 81

>ANGE1_HUMAN (Q9UNK9) Angel homolog 1|
          Length = 670

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 217 EREIWAGAMDGKLPPPNPNLPYREDCWSEGE 309
           E  IW     G+L PP   +PY E  W E E
Sbjct: 194 EASIWPFEGLGQLQPPAVEIPYHEILWREWE 224

>CAP_SCHPO (P36621) Adenylyl cyclase-associated protein (CAP)|
          Length = 551

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +1

Query: 244 DGKLPPPNPNLPYREDCWSEGETAALVD---AWGSRYIDLNRG 363
           +G LPPP P  P   D W +    A  D     G+ + ++N+G
Sbjct: 302 NGGLPPPPPPPPPSNDFWKDSNEPAPADNKGDMGAVFAEINKG 344

>STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)|
          Length = 2571

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 327 VDEGGRLALAPAVLPVREVGVGRRQLPVH 241
           + EGGR+ L P  +PVR V V      +H
Sbjct: 608 ISEGGRILLGPGGIPVRRVDVPAANGVIH 636

>DPOL_PYRHO (O59610) DNA polymerase (EC 2.7.7.7) [Contains: Pho pol intein (Pho|
            Pol I intein)]
          Length = 1235

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 280  YREDCWSEGETAALVDAWGSRYIDLNRGNL 369
            Y +  W   E A  V AWG +YIDL R  L
Sbjct: 960  YAKARWYCKECAESVTAWGRQYIDLVRREL 989

>DPOL_PYRAB (P77916) DNA polymerase 1 (EC 2.7.7.7) (Pab polymerase)|
          Length = 771

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 280 YREDCWSEGETAALVDAWGSRYIDLNRGNL 369
           Y +  W   E A  V AWG +YIDL R  L
Sbjct: 500 YAKARWYCKECAESVTAWGRQYIDLVRREL 529


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,073,207
Number of Sequences: 219361
Number of extensions: 615814
Number of successful extensions: 2348
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2348
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)