ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart19a05 |
|---|---|
| Clone Library Name | barley_pub |
>GAO1B_WHEAT (O04706) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin| C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) Length = 365 Score = 36.6 bits (83), Expect = 0.016 Identities = 18/59 (30%), Positives = 33/59 (55%) Frame = +2 Query: 80 VPPILQELVGAGVKEPPSQYVLPEQDRPAVVAVSEMPEPIPIIDLSRLSAGSPKEFAKL 256 V P+ V +G + PSQ++ PE + P A E+ +P+ID+ + +G P+ A++ Sbjct: 2 VQPVFDAAVLSGRADIPSQFIWPEGESPTPDAAEELH--VPLIDIGGMLSGDPRATAEV 58
>LDOX_MALDO (P51091) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)| (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) Length = 357 Score = 34.3 bits (77), Expect = 0.080 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Frame = +2 Query: 92 LQELVGAGVKEPPSQYVLPEQDRPAVVAVSEMPE-----PIPIIDLSRLSAGSPKEFAKL 256 ++ L G+G+ P +Y+ P+ + + + E + +P IDL + + + K AK Sbjct: 11 VETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKC 70 Query: 257 RSALRTGTSSW 289 R L+ W Sbjct: 71 REKLKKAAVDW 81
>CSPG5_MOUSE (Q71M36) Chondroitin sulfate proteoglycan 5 precursor (Neuroglycan| C) (Acidic leucine-rich EGF-like domain-containing brain protein) Length = 566 Score = 32.7 bits (73), Expect = 0.23 Identities = 24/90 (26%), Positives = 43/90 (47%) Frame = +2 Query: 38 ATMDSYDQQFKDLEVPPILQELVGAGVKEPPSQYVLPEQDRPAVVAVSEMPEPIPIIDLS 217 AT+ + D+ +PP + E PPS V D+P+V E+P+ IP+ Sbjct: 131 ATLQAPDEALGSSTMPPAIPE--ATETSGPPSPAV---HDKPSVGP--ELPKEIPLEVRL 183 Query: 218 RLSAGSPKEFAKLRSALRTGTSSWLLDMEW 307 L +P+ L+ L T +S ++D+++ Sbjct: 184 NLGGSTPEPTFPLQGTLETQPASDIIDIDY 213
>PROQ_YERPE (Q8ZFJ9) ProP effector| Length = 237 Score = 32.0 bits (71), Expect = 0.40 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +2 Query: 83 PPILQELVGAGVKEPPSQYVLPEQDRPAVVAVSE-MPEPIPIIDLSRLSAGSPKEFAKLR 259 P +E A P Q P+Q RP V E P P+P+ D+S+L G + + Sbjct: 144 PAPRREAGAAPENRKPRQSPRPQQVRPPRPQVEENQPRPVPVTDISKLQIGQEIKVRAGK 203 Query: 260 SAL 268 SA+ Sbjct: 204 SAM 206
>GAOX1_ORYSA (P93771) Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20| oxidase 1) (GA 20-oxidase 1) (Os20ox) Length = 372 Score = 28.1 bits (61), Expect(2) = 0.62 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +2 Query: 89 ILQELVGAGVKEPPSQYVLPEQDRPAVVAVSEMPEPIPIIDL 214 + V +G E PSQ++ P ++ P VAV E+ + +ID+ Sbjct: 12 VFDAAVLSGQTEIPSQFIWPAEESPGSVAVEEL--EVALIDV 51 Score = 21.9 bits (45), Expect(2) = 0.62 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +1 Query: 268 ENWNLFLVVGHGMEPSFL 321 E FLVV HG+E + L Sbjct: 69 ERHGFFLVVNHGIEAALL 86
>ACCO3_LYCES (P10967) 1-aminocyclopropane-1-carboxylate oxidase homolog (Protein| E8) Length = 363 Score = 26.6 bits (57), Expect(2) = 0.80 Identities = 17/63 (26%), Positives = 29/63 (46%) Frame = +2 Query: 101 LVGAGVKEPPSQYVLPEQDRPAVVAVSEMPEPIPIIDLSRLSAGSPKEFAKLRSALRTGT 280 LV +G+ + P +VLP +DR E P+IDL + P + ++ +R + Sbjct: 29 LVDSGITKVPQIFVLPPKDR---AKKCETHFVFPVIDLQGIDE-DPIKHKEIVDKVRDAS 84 Query: 281 SSW 289 W Sbjct: 85 EKW 87 Score = 23.1 bits (48), Expect(2) = 0.80 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 Query: 268 ENWNLFLVVGHGMEPSFL 321 E W F VV HG+ S L Sbjct: 85 EKWGFFQVVNHGIPTSVL 102
>CTR1_ARATH (Q05609) Serine/threonine-protein kinase CTR1 (EC 2.7.11.1)| Length = 821 Score = 30.4 bits (67), Expect = 1.2 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Frame = -2 Query: 279 VPVLKADRNLANSLGLPADSRLRSMMGMGSG---ISETATTAGRSCSGSTY 136 +P L A N S+G P D R G G G I A +AG S SG ++ Sbjct: 111 MPTLSAAANEIESVGFPQDDGFRLGFGGGGGDLRIQMAADSAGGSSSGKSW 161
>FLS1_ARATH (Q96330) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS 1) Length = 336 Score = 26.2 bits (56), Expect(2) = 1.3 Identities = 12/53 (22%), Positives = 27/53 (50%) Frame = +2 Query: 59 QQFKDLEVPPILQELVGAGVKEPPSQYVLPEQDRPAVVAVSEMPEPIPIIDLS 217 ++ +D+ +L E + P +++ E+++PA+ IP++DLS Sbjct: 4 ERVQDISSSSLLTEAI-------PLEFIRSEKEQPAITTFRGPTPAIPVVDLS 49 Score = 22.7 bits (47), Expect(2) = 1.3 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +1 Query: 268 ENWNLFLVVGHGM 306 E W LF VV HG+ Sbjct: 65 EEWGLFQVVNHGI 77
>G2OX8_ARATH (O49561) Gibberellin 2-beta-dioxygenase 8 (EC 1.14.11.13)| (Gibberellin 2-beta-hydroxylase 8) (Gibberellin 2-oxidase 8) (GA 2-oxidase 8) Length = 293 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +2 Query: 164 AVVAVSEMPEPIPIIDLSRLSAGSPKEFAKLRSALRTGTSSW 289 +V AV E E +P+ID+SRL G+ +E K + A+ + W Sbjct: 32 SVTAVVEEVE-LPVIDVSRLIDGAEEEREKCKEAIARASREW 72
>FLS_SOLTU (Q41452) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) Length = 349 Score = 29.3 bits (64), Expect = 2.6 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +2 Query: 128 PSQYVLPEQDRPAVVAVSEMPEPIPIIDLSRLSAGSPK 241 PS+Y+ E ++PA + + +P+ID+S + K Sbjct: 34 PSEYIRSENEQPAATTLQGVVLEVPVIDISNVDDDEEK 71
>MISS_MOUSE (Q9D7G9) MAPK-interacting and spindle-stabilizing protein| (Mitogen-activated protein kinase 1-interacting protein 1) Length = 263 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 14/78 (17%) Frame = +2 Query: 83 PPILQELVGAGVKEPPSQYVLPEQD--RPAVVAVSEMPEPIP------------IIDLSR 220 PP+ V G EPP+QY PE P + P P+P + ++ Sbjct: 111 PPVAWVTVPPGAWEPPAQYPTPEASYPSPGLQPSPNNPYPLPPGPSAASPGPGSLHRMNE 170 Query: 221 LSAGSPKEFAKLRSALRT 274 + GSP + + S L + Sbjct: 171 IPGGSPSDSSNPESTLES 188
>YM2A_CAEEL (P34447) Hypothetical protein F54F2.2, isoform a| Length = 867 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +2 Query: 125 PPSQYVLPEQDRPAVVAVSEMPEPIPIIDLSRLSAGSPKEFAKLRSALRTGTSSWLLDME 304 PP Q + EQD+ V ++ +P P P L L+ P + K+ + L G++ + +E Sbjct: 202 PPVQRLSKEQDKKKTVLLTSLPLPPPAPRLHMLADPLPIKSNKVNNVLGLGSAINAVSLE 261
>ACK1_HUMAN (Q07912) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-1) (Tyrosine| kinase non-receptor protein 2) Length = 1036 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = +2 Query: 47 DSYDQQFKDLEVPPILQELVGAGVKEPPSQ-----YVLPEQDRP 163 D Q D E+ I LVGAGV PSQ +PEQ RP Sbjct: 636 DDVAQDEDDFEICSINSTLVGAGVPAGPSQGQTNYAFVPEQARP 679
>OST4_HUMAN (Q9Y661) Heparan sulfate glucosamine 3-O-sulfotransferase 4 (EC| 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4) (Heparan sulfate 3-O-sulfotransferase 4) (h3-OST-4) Length = 456 Score = 28.5 bits (62), Expect = 4.4 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Frame = +2 Query: 74 LEVPPILQELVGAGVKEPPS---QYVLPEQDRPAVVAVSEMPEPIPIIDLSRLSAGSPKE 244 L+ P LQE GA + PPS +LP R + A S+ P P P L S G P E Sbjct: 59 LQFPLALQESPGAAAEPPPSPPPPSLLPTPVR--LGAPSQPPAPPP---LDNASHGEPPE 113 Query: 245 FAKLRSALRTGTSSW 289 + +A GT W Sbjct: 114 PPEQPAA--PGTDGW 126
>SCRB1_HUMAN (Q8WTV0) Scavenger receptor class B member 1 (SRB1) (SR-BI) (CD36| antigen-like 1) (CD36 and LIMPII analogous 1) (CLA-1) (Collagen type I receptor, thrombospondin receptor-like 1) Length = 552 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Frame = -2 Query: 234 LPADSRLRSMMGMGSGI----SETATTAGRSCSGSTYWLGGSFTPAPTSSCRIGGTSRSL 67 +P ++RS +G G S + G+ S T W +++P P + R+ S S Sbjct: 458 VPVICQIRSQVGAGQRAARADSHSLACWGKGASDRTLWPTAAWSPPPAAVLRL-CRSGSG 516 Query: 66 NCWS*ESMVA 37 +CW S +A Sbjct: 517 HCWGLRSTLA 526
>SCG2_RAT (P10362) Secretogranin-2 precursor (Secretogranin II) (SgII)| (Chromogranin C) [Contains: Secretoneurin (SN)] Length = 619 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +2 Query: 68 KDLEVPPI-LQELVGAGVKEPPSQYVLPEQDRPAVVAVSEMPE 193 ++L++PP L E++ AG E P+ V PEQD V + ++PE Sbjct: 358 RNLQIPPEDLIEMLKAG--EKPNGLVEPEQDLELAVDLDDIPE 398
>PPRB_HUMAN (Q15648) Peroxisome proliferator-activated receptor-binding protein| (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TRIP-2) (p53 regulator Length = 1581 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Frame = -2 Query: 237 GLPADSRLRSMMGMGSGISETATTAGRSCSGSTYWLGGS-----FTPAPTSSCRIGGTSR 73 G P S+ +S + GSG S + T+ S S+ LG S TP ++SC +S Sbjct: 1214 GTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSSGSLSQKTPPSSNSCTASSSSF 1273 Query: 72 S 70 S Sbjct: 1274 S 1274
>SCG2_MOUSE (Q03517) Secretogranin-2 precursor (Secretogranin II) (SgII)| (Chromogranin C) [Contains: Secretoneurin (SN)] Length = 617 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +2 Query: 68 KDLEVPPI-LQELVGAGVKEPPSQYVLPEQDRPAVVAVSEMPE 193 ++L++PP L E++ AG E P+ V PEQD V + ++PE Sbjct: 358 RNLQIPPEDLIEMLKAG--EKPNGLVEPEQDLELAVDLDDIPE 398
>COBQ_DEIRA (Q9RZU9) Cobyric acid synthase| Length = 474 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +2 Query: 161 PAVVAVSEMPEPIPIIDLSRLSAGSPKEFAKLRSALRTGTSSWLLDMEW 307 P + VS + E P+ +L+R SP+E A R+ + G+ S D+ W Sbjct: 257 PRLPRVSNLDEFAPLGELARWVT-SPQELAGARAVILPGSKSTAADLAW 304
>KIF4A_MOUSE (P33174) Chromosome-associated kinesin KIF4A (Chromokinesin)| Length = 1231 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -2 Query: 201 GMGSGISETATTAGRSCSGSTYWLGGSFTPAPTSSCRIG 85 G+ G + T G++ SG TY +GG++T IG Sbjct: 75 GVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQEHDSAIG 113
>MYOZ3_HUMAN (Q8TDC0) Myozenin-3 (Calsarcin-3) (FATZ-related protein 3)| Length = 251 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = +2 Query: 149 EQDRPAVVAVSEMPEPIPIIDLSRLSAGSPKEFAKLRSALRTGTSSWL 292 EQ P + A+ ++ EP+P +DL + P++ +LR S L Sbjct: 5 EQKGPVMAAMGDLTEPVPTLDLGK-KLSVPQDLMMEELSLRNNRGSLL 51
>CTDS1_HUMAN (Q9GZU7) Carboxy-terminal domain RNA polymerase II polypeptide A| small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (NLI-IF) Length = 261 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +2 Query: 86 PILQELVGAGVKEPPSQYVLPE---QDRPAVVAVSEMPEPI 199 P+L E GA K+ P QY+LPE QD + V ++ E + Sbjct: 61 PLLVEENGAIPKQTPVQYLLPEAKAQDSDKICVVIDLDETL 101
>AFF2_MOUSE (O55112) AF4/FMR2 family member 2 (Fragile X mental retardation| protein 2 homolog) (Protein FMR-2) (FMR2P) (Ox19 protein) Length = 1272 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +2 Query: 83 PPILQEL-VGAGVKEPPSQYVLPEQDRPAVVAVSEMPEPIP 202 PPI+Q + V VK PSQ V ++RP + + E P P Sbjct: 525 PPIIQPVEVQVKVKPNPSQSVAVPKERPLLSLIREKARPRP 565
>PRP40_HUMAN (O75400) Pre-mRNA-processing factor 40 homolog A (Formin-binding| protein 3) (Huntingtin yeast partner A) (Huntingtin-interacting protein HYPA/FBP11) (Fas ligand-associated factor 1) (NY-REN-6 antigen) Length = 957 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 312 RLHSMSNNQEEVPVLKADRNLANSLGLPADSRL 214 +LHSMS+ E P + +D N LG P + L Sbjct: 626 QLHSMSSWMELYPTISSDIRFTNMLGQPGSTAL 658
>KIF4A_XENLA (Q91784) Chromosome-associated kinesin KLP1 (Chromokinesin)| Length = 1226 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = -2 Query: 201 GMGSGISETATTAGRSCSGSTYWLGGSFTPAPTSSCRIGGTSRSL 67 G+ G + T G++ SG TY +GG++T + +G R++ Sbjct: 74 GLFKGYNATVLAYGQTGSGKTYSMGGAYTHNQENEPTVGVIPRTV 118
>PRP40_MOUSE (Q9R1C7) Pre-mRNA-processing factor 40 homolog A (Formin-binding| protein 3) (Formin-binding protein 11) (FBP 11) Length = 953 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 312 RLHSMSNNQEEVPVLKADRNLANSLGLPADSRL 214 +LHSMS+ E P + +D N LG P + L Sbjct: 622 QLHSMSSWMELYPTISSDIRFTNMLGQPGSTAL 654
>FLS_EUSGR (Q9M547) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) Length = 334 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +2 Query: 128 PSQYVLPEQDRPAVVAVSEMPEPIPIIDLS 217 P++Y+ E ++P + V + +P+IDLS Sbjct: 20 PAEYIRSENEQPVISTVHGVVLEVPVIDLS 49
>SYE_XYLFT (Q87AH7) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 467 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 Query: 120 FTPAPTSSCRIGGTSRSLNCW 58 F P+PT IGG +L CW Sbjct: 7 FAPSPTGYLHIGGARTALYCW 27
>SYE_XYLFA (Q9PF56) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 467 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 Query: 120 FTPAPTSSCRIGGTSRSLNCW 58 F P+PT IGG +L CW Sbjct: 7 FAPSPTGYLHIGGARTALYCW 27
>SYE_XANOR (Q5H2R3) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 467 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 Query: 120 FTPAPTSSCRIGGTSRSLNCW 58 F P+PT IGG +L CW Sbjct: 7 FAPSPTGYLHIGGARTALYCW 27
>SYE_XANCP (Q8P7C5) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 467 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 Query: 120 FTPAPTSSCRIGGTSRSLNCW 58 F P+PT IGG +L CW Sbjct: 7 FAPSPTGYLHIGGARTALYCW 27
>SYE_XANAC (Q8PIP8) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 467 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 Query: 120 FTPAPTSSCRIGGTSRSLNCW 58 F P+PT IGG +L CW Sbjct: 7 FAPSPTGYLHIGGARTALYCW 27
>KIF4A_HUMAN (O95239) Chromosome-associated kinesin KIF4A (Chromokinesin)| Length = 1232 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -2 Query: 201 GMGSGISETATTAGRSCSGSTYWLGGSFTPAPTSSCRIG 85 G+ G + T G++ SG TY +GG++T + +G Sbjct: 75 GVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVG 113
>Y1326_CAUCR (Q9A8M7) Hypothetical RNA methyltransferase CC1326 (EC 2.1.1.-)| Length = 415 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -2 Query: 237 GLPADSRLRSMMGMGSGISETATTAGRSCSGS 142 GL AD+R+R+ M G G T AG + G+ Sbjct: 200 GLSADARMRAAMAAGEGDFARVTLAGETIYGA 231
>FL3H_MATIN (Q05965) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)| (Flavonone-3-hydroxylase) (F3H) (FHT) (Fragment) Length = 357 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +1 Query: 268 ENWNLFLVVGHGMEPSFLA 324 ENW +F VV HG++ S +A Sbjct: 64 ENWGIFQVVDHGVDTSLVA 82
>ERA_DEIRA (Q9RWM0) GTP-binding protein era homolog| Length = 311 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/57 (28%), Positives = 30/57 (52%) Frame = +2 Query: 116 VKEPPSQYVLPEQDRPAVVAVSEMPEPIPIIDLSRLSAGSPKEFAKLRSALRTGTSS 286 ++ PP+ ++DR +V ++P+P+ ++ +A P+E KL AL G S Sbjct: 106 LRHPPT-----DEDRLVANSVRDLPKPLFLVGNKTDAAKYPEEAMKLYGALLEGRGS 157
>TXD11_HUMAN (Q6PKC3) Thioredoxin domain-containing protein 11 (EF-hand-binding| protein 1) Length = 985 Score = 27.3 bits (59), Expect = 9.8 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = +2 Query: 41 TMDSYDQQFKDLEVPPILQELVGAGVKEPPSQYVLPE 151 T++S+ Q F L P+ + L+G+G + PSQ+++ E Sbjct: 659 TLESFIQNFSVL-YSPLKRHLIGSGSAQFPSQHLITE 694
>RRPW_YEAST (P25328) Probable RNA-directed RNA polymerase in W dsRNA (EC| 2.7.7.48) Length = 829 Score = 27.3 bits (59), Expect = 9.8 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = +2 Query: 59 QQFKDLEVPPIL-QELVGAGVKEPPSQYVLPEQDRPAVVAVSEMPEPIPIIDLSRLSAGS 235 +QF+ L +PP L +EL GAG+ P + P R A+ ++ + R+ G Sbjct: 598 RQFRRLGIPPFLPRELGGAGLVGPSDRVDAPAFHRKAISSLVWGSDATAAYSFIRMWQGF 657 Query: 236 PKEFAKLRSALRTGTSSWLLD 298 E ++A T +W D Sbjct: 658 --EGHPWKTAASQETDTWFAD 676
>FLS_PETHY (Q07512) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) Length = 348 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +2 Query: 128 PSQYVLPEQDRPAVVAVSEMPEPIPIIDL 214 PS+Y+ E ++PA + + +P+IDL Sbjct: 32 PSEYIRSENEQPAATTLHGVVLQVPVIDL 60
>GCX1_RAT (Q76IQ7) Granulosa cell HMG box protein 1 (GCX-1)| Length = 473 Score = 27.3 bits (59), Expect = 9.8 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = -2 Query: 276 PVLKADRNLANSLGLPADSRLRSMMGMGSGISETATTAGRSCSGSTYWLGGSFTPAPTSS 97 P+L LA+ + + S+L S MG+ SGI+ ++ + S S TP+P+SS Sbjct: 114 PLLGRPAMLASHMSALSQSQLISQMGLRSGIAHSSPSPPGSKSA---------TPSPSSS 164
>CTDS1_MOUSE (P58466) Carboxy-terminal domain RNA polymerase II polypeptide A| small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (Golli-interacting protein) (GIP) Length = 261 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = +2 Query: 86 PILQELVGAGVKEPPSQYVLPE---QDRPAVVAVSEMPEPI 199 P+L E GA K P QY+LPE QD + V ++ E + Sbjct: 61 PLLVEENGAIPKHTPVQYLLPEAKAQDSDKICVVIDLDETL 101
>TCMG_STRGA (P39888) Tetracenomycin polyketide synthesis hydroxylase tcmG (EC| 1.14.13.-) Length = 572 Score = 27.3 bits (59), Expect = 9.8 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Frame = +2 Query: 143 LPEQDRPAVVAVSEMPEPIPIIDLSRLSAG--------SPKEFAKLRSA--LRTGTSSWL 292 LP D P V+ + E+P + + D R G SP++F R A +RT T Sbjct: 243 LPNPDEPGVLQLPEVPAVLQLFDEDRWIFGFFFDPRETSPEQFTDERCAQIIRTATGLPG 302 Query: 293 LDMEWSLA 316 L +E +A Sbjct: 303 LPVEVQMA 310
>EXPA_DROME (Q07436) Protein expanded| Length = 1427 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +2 Query: 125 PPSQYVLPEQDRPAVVAVSEMPEPIPIIDL-SRLSAGSPKE 244 PP YV +P + A SE P PIP + SR+S P++ Sbjct: 1202 PPPPYVNRRLKKPPMPAPSEKPPPIPSKPIPSRMSPIPPRK 1242
>KSGA_SILPO (Q5LQN0) Dimethyladenosine transferase (EC 2.1.1.-)| (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) (Kasugamycin dimethyltransferase) Length = 279 Score = 27.3 bits (59), Expect = 9.8 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = +2 Query: 125 PPSQYVLPEQDRPAVVAVSEMPEPIPIIDLSRLSAGSPKEFAKLRSALRTGTSSWLLDME 304 PP + P + AVV ++ +PEP D + LS F + R LR D+E Sbjct: 189 PPEAFTPPPKVSSAVVHLTALPEPRFPADAAILSRVVAAAFNQRRKMLRAALKGQAPDIE 248
>SYK3_VIBPA (Q87KY6) Putative lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA| ligase) (LysRS) (GX) Length = 323 Score = 27.3 bits (59), Expect = 9.8 Identities = 19/64 (29%), Positives = 27/64 (42%) Frame = +2 Query: 47 DSYDQQFKDLEVPPILQELVGAGVKEPPSQYVLPEQDRPAVVAVSEMPEPIPIIDLSRLS 226 D ++ FK +E+ EL P Q EQD + + P+PI +S L Sbjct: 232 DRFEVYFKGIELANGFHEL-----DNPKEQLARFEQDNAKRIEMGLKPQPIDYHLISALE 286 Query: 227 AGSP 238 AG P Sbjct: 287 AGLP 290
>ISPE_BURTA (Q2T1B6) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 293 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 Query: 273 VLKADRNLANSLGLPADSRLRSMMGMGSGISETATT 166 +LKA A + + D RL G+G G S+ ATT Sbjct: 79 LLKAHTGTAAGVDIEIDKRLPMGAGLGGGSSDAATT 114
>CFC1_MOUSE (P97766) Cryptic protein precursor| Length = 202 Score = 27.3 bits (59), Expect = 9.8 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Frame = -2 Query: 279 VPVLKADRNLANSL---GLPADSRLRSMMGMGSGISETATTAGRSCSGSTYWLGGSFTPA 109 +P DR L+NS +P +RL + S + E+A R C + GSF Sbjct: 54 IPGTTLDRTLSNSSRKNDIPEGARLWDSLPDSSTLGESAVPVSRCCHNGGTCVLGSFCVC 113 Query: 108 P 106 P Sbjct: 114 P 114
>SYK1_MYCTU (P67607) Lysyl-tRNA synthetase 1 (EC 6.1.1.6) (Lysine--tRNA ligase| 1) (LysRS 1) Length = 505 Score = 27.3 bits (59), Expect = 9.8 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Frame = -2 Query: 303 SMSNNQEEVPVLKADR--NLANSLGLPADSRLRSMMGMGSG--ISET-ATTAGRSCSGST 139 S++ +E P DR +A+SLGL D + G G G I E T G+S S T Sbjct: 329 SVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELWERTVGKSLSAPT 388 Query: 138 Y 136 + Sbjct: 389 F 389
>SYK1_MYCBO (P67608) Lysyl-tRNA synthetase 1 (EC 6.1.1.6) (Lysine--tRNA ligase| 1) (LysRS 1) Length = 505 Score = 27.3 bits (59), Expect = 9.8 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Frame = -2 Query: 303 SMSNNQEEVPVLKADR--NLANSLGLPADSRLRSMMGMGSG--ISET-ATTAGRSCSGST 139 S++ +E P DR +A+SLGL D + G G G I E T G+S S T Sbjct: 329 SVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELWERTVGKSLSAPT 388 Query: 138 Y 136 + Sbjct: 389 F 389 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,478,524 Number of Sequences: 219361 Number of extensions: 839821 Number of successful extensions: 3425 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3343 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3423 length of database: 80,573,946 effective HSP length: 83 effective length of database: 62,366,983 effective search space used: 1496807592 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
