Clone Name	bart18g08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|L07941.1|WHTISMT Triticum aestivum L-isoaspartyl methyltransf...	674	0.0
2	ref|XM_472914.1| Oryza sativa (japonica cultivar-group), predic...	371	2e-99
3	dbj|AK105549.1| Oryza sativa (japonica cultivar-group) cDNA clon...	361	2e-96
4	emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,...	240	4e-60
5	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	240	4e-60
6	emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...	240	4e-60
7	ref|XM_483742.1| Oryza sativa (japonica cultivar-group), mRNA	54	5e-04
8	ref|XM_507330.1| PREDICTED Oryza sativa (japonica cultivar-group...	54	5e-04
9	dbj|AK100496.1| Oryza sativa (japonica cultivar-group) cDNA clon...	54	5e-04
10	dbj|AK059917.1| Oryza sativa (japonica cultivar-group) cDNA clon...	54	5e-04
11	gb|DQ336282.1| Vitis pseudoreticulata L-isoaspartate-O-methyl tr...	50	0.009
12	gb|AF022968.1| Caenorhabditis elegans cosmid C10F3, complete seq...	48	0.034
13	ref|NM_072150.3| Caenorhabditis elegans Protein Carboxymethyltra...	48	0.034
14	gb|U15129.1|CEU15129 Caenorhabditis elegans protein-L-isoasparta...	48	0.034
15	gb|U09669.1|CEU09669 Caenorhabditis elegans Bristol (N2) protein...	48	0.034
16	gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome...	46	0.13
17	gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome...	46	0.13
18	ref|XM_568902.1| Cryptococcus neoformans var. neoformans JEC21 h...	42	2.1
19	emb|Z83843.3|HS368A4 Human DNA sequence from clone RP3-368A4 on ...	42	2.1
20	gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr...	42	2.1
21	gb|AC021055.18| Homo sapiens 3 BAC RP11-139K4 (Roswell Park Canc...	42	2.1
22	gb|AC093258.2| Homo sapiens chromosome 5 clone RP11-1E3, complet...	42	2.1
23	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.1
24	dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D...	42	2.1
25	dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic D...	42	2.1
26	ref|XM_582935.2| PREDICTED: Bos taurus similar to pre-B-cell leu...	40	8.2
27	gb|AC160540.7| Mus musculus chromosome 7, clone RP23-44O19, comp...	40	8.2
28	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	40	8.2
29	emb|AL451083.5| Human DNA sequence from clone RP11-286F20 on chr...	40	8.2
30	emb|AL049842.5|HSDJ129L7 Human DNA sequence from clone RP1-129L7...	40	8.2
31	emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chr...	40	8.2
32	gb|AC112222.2| Homo sapiens chromosome 3 clone RP11-114A11, comp...	40	8.2
33	gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str...	40	8.2
34	gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare str...	40	8.2
35	gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome	40	8.2
36	gb|AC112515.4| Homo sapiens chromosome 3 clone RP11-697B5, compl...	40	8.2
37	emb|AJ617016.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, cl...	40	8.2
38	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	40	8.2
39	ref|XM_392995.2| PREDICTED: Apis mellifera similar to protein-L-...	40	8.2
40	gb|AC074117.7| Homo sapiens BAC clone RP11-413M20 from 2, comple...	40	8.2
41	gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, comp...	40	8.2
42	gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Canc...	40	8.2

---

>gb|L07941.1|WHTISMT Triticum aestivum L-isoaspartyl methyltransferase mRNA, complete
           cds
          Length = 940

 Score =  674 bits (340), Expect = 0.0
 Identities = 443/476 (93%), Gaps = 1/476 (0%)
 Strand = Plus / Plus

                                                                       
Query: 129 gcagcttcggcgctgctccccgtaccactggatggcgcaattttggactgaaggatcgct 188
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 86  gcagcttcggcgctgctccccgtaccactggatggcgcaattttgggctgaaggatcact 145

                                                                       
Query: 189 ggaaaagaacaacgctctggttgaatacctgaagcagtatggtgtcgttcgaacggataa 248
           ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 146 ggagaagaacaacgctctggttgaatacctgaaacagtatggtgttgttcgaaccgataa 205

                                                                       
Query: 249 agtggcagaagttatggaaactatcgacagagccttatttgtaccagagggctttacccc 308
           |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 206 agtggcagaagttatggaaactatcgaccgagccttatttgtaccggagggctttacccc 265

                                                                       
Query: 309 ttacattgacagtcctatgcctattggttacaatgcaacaatatctgctcctcacatgca 368
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttacaccgacagtcctatgcctattggttacaatgcaacaatatctgctcctcacatgca 325

                                                                       
Query: 369 tgcaacctgcttagaactgttgaaagatcacttacagccaggcatgcatgctctagacgt 428
            ||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||
Sbjct: 326 cgcaacctgcttagaactgttgaaggattatttacagccaggcatgcatgctctggacgt 385

                                                                       
Query: 429 tggatcaggcagtggctacttgacagcttgttttgcaatgatggtcgggccagaaggtcg 488
           ||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 386 tggatcaggcagtggttacttgactgcttgctttgcaatgatggtcggaccagaaggtcg 445

                                                                       
Query: 489 tgcagtggggattgaacatattcctgaacttgttgctgcctctactgaaaatgtagaacg 548
            ||||||||||||||||| ||||||||||| |||| ||| |||||||||||||| |||||
Sbjct: 446 cgcagtggggattgaacacattcctgaactcgttgttgcttctactgaaaatgtcgaacg 505

                                                                   
Query: 549 gagtgctgcagctaaactgctgaaggacggttcactctctttttcatgtttcagat 604
           ||||||||||||   |||  ||||||| |||||||| || ||||||||||||||||
Sbjct: 506 gagtgctgcagcagcactaatgaaggatggttcactttc-ttttcatgtttcagat 560

---

>ref|XM_472914.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 693

 Score =  371 bits (187), Expect = 2e-99
 Identities = 334/383 (87%)
 Strand = Plus / Plus

                                                                       
Query: 160 atggcgcaattttggactgaaggatcgctggaaaagaacaacgctctggttgaatacctg 219
           ||||||||||| |||||| ||||||| ||||| |||||||| ||||| || |||||||||
Sbjct: 1   atggcgcaattctggactcaaggatcactggacaagaacaaagctcttgtcgaatacctg 60

                                                                       
Query: 220 aagcagtatggtgtcgttcgaacggataaagtggcagaagttatggaaactatcgacaga 279
           ||||| |||||||  ||| |||| ||||||||||| ||||| |||||||  || ||||||
Sbjct: 61  aagcaatatggtgctgttagaactgataaagtggctgaagtaatggaaagcattgacaga 120

                                                                       
Query: 280 gccttatttgtaccagagggctttaccccttacattgacagtcctatgcctattggttac 339
           || || || ||| |||||||| |||| ||||||| |||||| ||||||||||||||||| 
Sbjct: 121 gcattgttcgtagcagagggccttactccttacactgacagccctatgcctattggttat 180

                                                                       
Query: 340 aatgcaacaatatctgctcctcacatgcatgcaacctgcttagaactgttgaaagatcac 399
           || || || ||||||||||||||||||||||| |||||||| || ||  |||| ||||||
Sbjct: 181 aacgcgacgatatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcac 240

                                                                       
Query: 400 ttacagccaggcatgcatgctctagacgttggatcaggcagtggctacttgacagcttgt 459
           || |||||||| |||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 241 ttgcagccaggaatgcatgctctagatgttggatcaggcagcggttacttgacagcttgt 300

                                                                       
Query: 460 tttgcaatgatggtcgggccagaaggtcgtgcagtggggattgaacatattcctgaactt 519
           |||||||||||||| || |||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 301 tttgcaatgatggttggaccagaaggccgtgcagtggggatagaacatattcctgagctt 360

                                  
Query: 520 gttgctgcctctactgaaaatgt 542
           || ||||| || ||||| |||||
Sbjct: 361 gtcgctgcttcgactgagaatgt 383

---

>dbj|AK105549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A09, full
            insert sequence
          Length = 2141

 Score =  361 bits (182), Expect = 2e-96
 Identities = 329/378 (87%)
 Strand = Plus / Plus

                                                                        
Query: 165  gcaattttggactgaaggatcgctggaaaagaacaacgctctggttgaatacctgaagca 224
            |||||| |||||| ||||||| ||||| |||||||| ||||| || ||||||||||||||
Sbjct: 1088 gcaattctggactcaaggatcactggacaagaacaaagctcttgtcgaatacctgaagca 1147

                                                                        
Query: 225  gtatggtgtcgttcgaacggataaagtggcagaagttatggaaactatcgacagagcctt 284
             |||||||  ||| |||| ||||||||||| ||||| |||||||  || |||||||| ||
Sbjct: 1148 atatggtgctgttagaactgataaagtggctgaagtaatggaaagcattgacagagcatt 1207

                                                                        
Query: 285  atttgtaccagagggctttaccccttacattgacagtcctatgcctattggttacaatgc 344
             || ||| |||||||| |||| ||||||| |||||| ||||||||||||||||| || ||
Sbjct: 1208 gttcgtagcagagggccttactccttacactgacagccctatgcctattggttataacgc 1267

                                                                        
Query: 345  aacaatatctgctcctcacatgcatgcaacctgcttagaactgttgaaagatcacttaca 404
             || ||||||||||||||||||||||| |||||||| || ||  |||| |||||||| ||
Sbjct: 1268 gacgatatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgca 1327

                                                                        
Query: 405  gccaggcatgcatgctctagacgttggatcaggcagtggctacttgacagcttgttttgc 464
            |||||| |||||||||||||| |||||||||||||| || ||||||||||||||||||||
Sbjct: 1328 gccaggaatgcatgctctagatgttggatcaggcagcggttacttgacagcttgttttgc 1387

                                                                        
Query: 465  aatgatggtcgggccagaaggtcgtgcagtggggattgaacatattcctgaacttgttgc 524
            ||||||||| || |||||||| |||||||||||||| |||||||||||||| ||||| ||
Sbjct: 1388 aatgatggttggaccagaaggccgtgcagtggggatagaacatattcctgagcttgtcgc 1447

                              
Query: 525  tgcctctactgaaaatgt 542
            ||| || ||||| |||||
Sbjct: 1448 tgcttcgactgagaatgt 1465

---

>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
             complete sequence
          Length = 129498

 Score =  240 bits (121), Expect = 4e-60
 Identities = 235/273 (86%)
 Strand = Plus / Minus

                                                                         
Query: 165   gcaattttggactgaaggatcgctggaaaagaacaacgctctggttgaatacctgaagca 224
             |||||| |||||| ||||||| ||||| |||||||| ||||| || ||||||||||||||
Sbjct: 48729 gcaattctggactcaaggatcactggacaagaacaaagctcttgtcgaatacctgaagca 48670

                                                                         
Query: 225   gtatggtgtcgttcgaacggataaagtggcagaagttatggaaactatcgacagagcctt 284
              |||||||  ||| |||| ||||||||||| ||||| |||||||  || |||||||| ||
Sbjct: 48669 atatggtgctgttagaactgataaagtggctgaagtaatggaaagcattgacagagcatt 48610

                                                                         
Query: 285   atttgtaccagagggctttaccccttacattgacagtcctatgcctattggttacaatgc 344
              || ||| |||||||| |||| ||||||| |||||| ||||||||||||||||| || ||
Sbjct: 48609 gttcgtagcagagggccttactccttacactgacagccctatgcctattggttataacgc 48550

                                                                         
Query: 345   aacaatatctgctcctcacatgcatgcaacctgcttagaactgttgaaagatcacttaca 404
              || ||||||||||||||||||||||| |||||||| || ||  |||| |||||||| ||
Sbjct: 48549 gacgatatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgca 48490

                                              
Query: 405   gccaggcatgcatgctctagacgttggatcagg 437
             |||||| |||||||||||||| |||||||||||
Sbjct: 48489 gccaggaatgcatgctctagatgttggatcagg 48457



 Score =  127 bits (64), Expect = 5e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                         
Query: 435   aggcagtggctacttgacagcttgttttgcaatgatggtcgggccagaaggtcgtgcagt 494
             |||||| || ||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 48257 aggcagcggttacttgacagcttgttttgcaatgatggttggaccagaaggccgtgcagt 48198

                                                             
Query: 495   ggggattgaacatattcctgaacttgttgctgcctctactgaaaatgt 542
             |||||| |||||||||||||| ||||| ||||| || ||||| |||||
Sbjct: 48197 ggggatagaacatattcctgagcttgtcgctgcttcgactgagaatgt 48150

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  240 bits (121), Expect = 4e-60
 Identities = 235/273 (86%)
 Strand = Plus / Minus

                                                                            
Query: 165      gcaattttggactgaaggatcgctggaaaagaacaacgctctggttgaatacctgaagca 224
                |||||| |||||| ||||||| ||||| |||||||| ||||| || ||||||||||||||
Sbjct: 24051750 gcaattctggactcaaggatcactggacaagaacaaagctcttgtcgaatacctgaagca 24051691

                                                                            
Query: 225      gtatggtgtcgttcgaacggataaagtggcagaagttatggaaactatcgacagagcctt 284
                 |||||||  ||| |||| ||||||||||| ||||| |||||||  || |||||||| ||
Sbjct: 24051690 atatggtgctgttagaactgataaagtggctgaagtaatggaaagcattgacagagcatt 24051631

                                                                            
Query: 285      atttgtaccagagggctttaccccttacattgacagtcctatgcctattggttacaatgc 344
                 || ||| |||||||| |||| ||||||| |||||| ||||||||||||||||| || ||
Sbjct: 24051630 gttcgtagcagagggccttactccttacactgacagccctatgcctattggttataacgc 24051571

                                                                            
Query: 345      aacaatatctgctcctcacatgcatgcaacctgcttagaactgttgaaagatcacttaca 404
                 || ||||||||||||||||||||||| |||||||| || ||  |||| |||||||| ||
Sbjct: 24051570 gacgatatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgca 24051511

                                                 
Query: 405      gccaggcatgcatgctctagacgttggatcagg 437
                |||||| |||||||||||||| |||||||||||
Sbjct: 24051510 gccaggaatgcatgctctagatgttggatcagg 24051478



 Score =  127 bits (64), Expect = 5e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                            
Query: 435      aggcagtggctacttgacagcttgttttgcaatgatggtcgggccagaaggtcgtgcagt 494
                |||||| || ||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 24051278 aggcagcggttacttgacagcttgttttgcaatgatggttggaccagaaggccgtgcagt 24051219

                                                                
Query: 495      ggggattgaacatattcctgaacttgttgctgcctctactgaaaatgt 542
                |||||| |||||||||||||| ||||| ||||| || ||||| |||||
Sbjct: 24051218 ggggatagaacatattcctgagcttgtcgctgcttcgactgagaatgt 24051171

---

>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete
             sequence
          Length = 90767

 Score =  240 bits (121), Expect = 4e-60
 Identities = 235/273 (86%)
 Strand = Plus / Minus

                                                                         
Query: 165   gcaattttggactgaaggatcgctggaaaagaacaacgctctggttgaatacctgaagca 224
             |||||| |||||| ||||||| ||||| |||||||| ||||| || ||||||||||||||
Sbjct: 17841 gcaattctggactcaaggatcactggacaagaacaaagctcttgtcgaatacctgaagca 17782

                                                                         
Query: 225   gtatggtgtcgttcgaacggataaagtggcagaagttatggaaactatcgacagagcctt 284
              |||||||  ||| |||| ||||||||||| ||||| |||||||  || |||||||| ||
Sbjct: 17781 atatggtgctgttagaactgataaagtggctgaagtaatggaaagcattgacagagcatt 17722

                                                                         
Query: 285   atttgtaccagagggctttaccccttacattgacagtcctatgcctattggttacaatgc 344
              || ||| |||||||| |||| ||||||| |||||| ||||||||||||||||| || ||
Sbjct: 17721 gttcgtagcagagggccttactccttacactgacagccctatgcctattggttataacgc 17662

                                                                         
Query: 345   aacaatatctgctcctcacatgcatgcaacctgcttagaactgttgaaagatcacttaca 404
              || ||||||||||||||||||||||| |||||||| || ||  |||| |||||||| ||
Sbjct: 17661 gacgatatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgca 17602

                                              
Query: 405   gccaggcatgcatgctctagacgttggatcagg 437
             |||||| |||||||||||||| |||||||||||
Sbjct: 17601 gccaggaatgcatgctctagatgttggatcagg 17569



 Score =  127 bits (64), Expect = 5e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                         
Query: 435   aggcagtggctacttgacagcttgttttgcaatgatggtcgggccagaaggtcgtgcagt 494
             |||||| || ||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 17369 aggcagcggttacttgacagcttgttttgcaatgatggttggaccagaaggccgtgcagt 17310

                                                             
Query: 495   ggggattgaacatattcctgaacttgttgctgcctctactgaaaatgt 542
             |||||| |||||||||||||| ||||| ||||| || ||||| |||||
Sbjct: 17309 ggggatagaacatattcctgagcttgtcgctgcttcgactgagaatgt 17262

---

>ref|XM_483742.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1054

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 87/107 (81%)
 Strand = Plus / Plus

                                                                       
Query: 403 cagccaggcatgcatgctctagacgttggatcaggcagtggctacttgacagcttgtttt 462
           ||||| ||||||| |||||| || |||||||||||||  || ||| | |||||||| || 
Sbjct: 432 cagcctggcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttc 491

                                                          
Query: 463 gcaatgatggtcgggccagaaggtcgtgcagtggggattgaacatat 509
           || || ||||| || |||||||| || ||||| ||  ||||||||||
Sbjct: 492 gcgattatggttggaccagaagggcgagcagttggtgttgaacatat 538

---

>ref|XM_507330.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.18
           mRNA
          Length = 1064

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 87/107 (81%)
 Strand = Plus / Plus

                                                                       
Query: 403 cagccaggcatgcatgctctagacgttggatcaggcagtggctacttgacagcttgtttt 462
           ||||| ||||||| |||||| || |||||||||||||  || ||| | |||||||| || 
Sbjct: 441 cagcctggcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttc 500

                                                          
Query: 463 gcaatgatggtcgggccagaaggtcgtgcagtggggattgaacatat 509
           || || ||||| || |||||||| || ||||| ||  ||||||||||
Sbjct: 501 gcgattatggttggaccagaagggcgagcagttggtgttgaacatat 547

---

>dbj|AK100496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B17, full
           insert sequence
          Length = 1064

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 87/107 (81%)
 Strand = Plus / Plus

                                                                       
Query: 403 cagccaggcatgcatgctctagacgttggatcaggcagtggctacttgacagcttgtttt 462
           ||||| ||||||| |||||| || |||||||||||||  || ||| | |||||||| || 
Sbjct: 441 cagcctggcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttc 500

                                                          
Query: 463 gcaatgatggtcgggccagaaggtcgtgcagtggggattgaacatat 509
           || || ||||| || |||||||| || ||||| ||  ||||||||||
Sbjct: 501 gcgattatggttggaccagaagggcgagcagttggtgttgaacatat 547

---

>dbj|AK059917.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-F04, full
           insert sequence
          Length = 1054

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 87/107 (81%)
 Strand = Plus / Plus

                                                                       
Query: 403 cagccaggcatgcatgctctagacgttggatcaggcagtggctacttgacagcttgtttt 462
           ||||| ||||||| |||||| || |||||||||||||  || ||| | |||||||| || 
Sbjct: 432 cagcctggcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttc 491

                                                          
Query: 463 gcaatgatggtcgggccagaaggtcgtgcagtggggattgaacatat 509
           || || ||||| || |||||||| || ||||| ||  ||||||||||
Sbjct: 492 gcgattatggttggaccagaagggcgagcagttggtgttgaacatat 538

---

>gb|DQ336282.1| Vitis pseudoreticulata L-isoaspartate-O-methyl transferase mRNA,
           complete cds
          Length = 750

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 127/161 (78%)
 Strand = Plus / Plus

                                                                       
Query: 334 ggttacaatgcaacaatatctgctcctcacatgcatgcaacctgcttagaactgttgaaa 393
           ||||||||||| || || || || ||||| |||||||| || ||| | || |||||| | 
Sbjct: 175 ggttacaatgccactatttcggcacctcatatgcatgccacatgcctcgagctgttgcag 234

                                                                       
Query: 394 gatcacttacagccaggcatgcatgctctagacgttggatcaggcagtggctacttgaca 453
           ||  | || ||||| || |||||||||||||| ||||| || || |  || || ||||||
Sbjct: 235 gaaaatttgcagcctggaatgcatgctctagatgttggttctggaacggggtatttgaca 294

                                                    
Query: 454 gcttgttttgcaatgatggtcgggccagaaggtcgtgcagt 494
           || || |||||| ||||||| || ||| ||||| |||||||
Sbjct: 295 gcctgctttgcactgatggttggaccacaaggttgtgcagt 335

---

>gb|AF022968.1| Caenorhabditis elegans cosmid C10F3, complete sequence
          Length = 40172

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 418  gctctagacgttggatcaggcagtggctacttgacagcttgttttgcaatgatggt 473
            ||||| |||||||| ||||| ||||| || ||||||| |||| | |||||||||||
Sbjct: 2324 gctcttgacgttggctcaggaagtggatatttgacagtttgtatggcaatgatggt 2269

---

>ref|NM_072150.3| Caenorhabditis elegans Protein Carboxymethyltransferase family
           member (pcm-1) (pcm-1) mRNA, complete cds
          Length = 864

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 418 gctctagacgttggatcaggcagtggctacttgacagcttgttttgcaatgatggt 473
           ||||| |||||||| ||||| ||||| || ||||||| |||| | |||||||||||
Sbjct: 305 gctcttgacgttggctcaggaagtggatatttgacagtttgtatggcaatgatggt 360

---

>gb|U15129.1|CEU15129 Caenorhabditis elegans protein-L-isoaspartate (D-aspartate)
            O-methyltransferase (pcm-1) gene, complete cds
          Length = 3745

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 418  gctctagacgttggatcaggcagtggctacttgacagcttgttttgcaatgatggt 473
            ||||| |||||||| ||||| ||||| || ||||||| |||| | |||||||||||
Sbjct: 1161 gctcttgacgttggctcaggaagtggatatttgacagtttgtatggcaatgatggt 1216

---

>gb|U09669.1|CEU09669 Caenorhabditis elegans Bristol (N2) protein-L-isoaspartate
           (D-aspartate) O-methyltransferase mRNA, complete cds
          Length = 864

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 418 gctctagacgttggatcaggcagtggctacttgacagcttgttttgcaatgatggt 473
           ||||| |||||||| ||||| ||||| || ||||||| |||| | |||||||||||
Sbjct: 305 gctcttgacgttggctcaggaagtggatatttgacagtttgtatggcaatgatggt 360

---

>gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome 8, complete sequence
          Length = 219597

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 392    aagatcacttacagccaggcatg 414
              |||||||||||||||||||||||
Sbjct: 215148 aagatcacttacagccaggcatg 215170

---

>gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome 8, complete sequence
          Length = 220437

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 392    aagatcacttacagccaggcatg 414
              |||||||||||||||||||||||
Sbjct: 192322 aagatcacttacagccaggcatg 192300

---

>ref|XM_568902.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNB03250) partial mRNA
          Length = 735

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 343 gcaacaatatctgctcctcacatgcatgc 371
           ||||| ||||| |||||||||||||||||
Sbjct: 175 gcaactatatccgctcctcacatgcatgc 203

---

>emb|Z83843.3|HS368A4 Human DNA sequence from clone RP3-368A4 on chromosome Xq12 Contains a
            novel protein similar to upregulated during skeletal
            muscle growth 5 (MGC14697), a novel protein similar to
            BMP-2 inducible kinase (BIKE) (fragment) and a Rab
            coupling protein (RCP) pseudogene, complete sequence
          Length = 47828

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 438  cagtggctacttgacagcttg 458
            |||||||||||||||||||||
Sbjct: 2572 cagtggctacttgacagcttg 2592

---

>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
              sequence
          Length = 1632307

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 343    gcaacaatatctgctcctcacatgcatgc 371
              ||||| ||||| |||||||||||||||||
Sbjct: 983143 gcaactatatccgctcctcacatgcatgc 983115

---

>gb|AC021055.18| Homo sapiens 3 BAC RP11-139K4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 156754

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 438    cagtggctacttgacagcttg 458
              |||||||||||||||||||||
Sbjct: 146598 cagtggctacttgacagcttg 146618

---

>gb|AC093258.2| Homo sapiens chromosome 5 clone RP11-1E3, complete sequence
          Length = 151202

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 438   cagtggctacttgacagcttg 458
             |||||||||||||||||||||
Sbjct: 72821 cagtggctacttgacagcttg 72841

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 339      caatgcaacaatatctgctcctcac 363
                |||||||||||| ||||||||||||
Sbjct: 26629417 caatgcaacaatctctgctcctcac 26629393

---

>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1340_C08
          Length = 192167

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 339    caatgcaacaatatctgctcctcac 363
              |||||||||||| ||||||||||||
Sbjct: 174688 caatgcaacaatctctgctcctcac 174664

---

>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524G08
          Length = 146690

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 339   caatgcaacaatatctgctcctcac 363
             |||||||||||| ||||||||||||
Sbjct: 47021 caatgcaacaatctctgctcctcac 46997

---

>ref|XM_582935.2| PREDICTED: Bos taurus similar to pre-B-cell leukemia transcription
           factor interacting protein 1 (LOC506485), mRNA
          Length = 3321

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 512 ctgaacttgttgctgcctct 531
           ||||||||||||||||||||
Sbjct: 27  ctgaacttgttgctgcctct 8

---

>gb|AC160540.7| Mus musculus chromosome 7, clone RP23-44O19, complete sequence
          Length = 221807

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 416    atgctctagacgttggatcaggcagtgg 443
              ||||||||||||| ||| ||||||||||
Sbjct: 212874 atgctctagacgtgggagcaggcagtgg 212901

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 7       gtcgccgccgctgcgtccgcctct 30
               |||||||||||| |||||||||||
Sbjct: 5095155 gtcgccgccgctccgtccgcctct 5095132

---

>emb|AL451083.5| Human DNA sequence from clone RP11-286F20 on chromosome 1 Contains a
             novel gene (KIAA1383) and a CpG island, complete sequence
          Length = 98078

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   aaagatcacttacagccagg 410
             ||||||||||||||||||||
Sbjct: 29481 aaagatcacttacagccagg 29500

---

>emb|AL049842.5|HSDJ129L7 Human DNA sequence from clone RP1-129L7 on chromosome 6q12-13 Contains
             a nuclear fragile X mental retardation protein interacting
             protein 1 (NUFIP1) pseudogene, complete sequence
          Length = 80837

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   tgcctattggttacaatgca 345
             ||||||||||||||||||||
Sbjct: 66804 tgcctattggttacaatgca 66785

---

>emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chromosome 4 Contains a
             novel gene and a casein kinase II alpha 1 polypeptide
             (Csnk2a1) pseudogene, complete sequence
          Length = 134053

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 506   atattcctgaacttgttgct 525
             ||||||||||||||||||||
Sbjct: 81232 atattcctgaacttgttgct 81213

---

>gb|AC112222.2| Homo sapiens chromosome 3 clone RP11-114A11, complete sequence
          Length = 151031

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 533    ctgaaaatgtagaacggagt 552
              ||||||||||||||||||||
Sbjct: 109626 ctgaaaatgtagaacggagt 109645

---

>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 7     gtcgccgccgctgcgtccgcctct 30
             |||||||||||| |||||||||||
Sbjct: 74550 gtcgccgccgctccgtccgcctct 74573

---

>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0091J11, from chromosome 3, complete sequence
          Length = 181163

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      gtcgccgccgctgcgtccgcctct 30
              |||||||||||| |||||||||||
Sbjct: 161363 gtcgccgccgctccgtccgcctct 161386

---

>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    gcttgttttgcaatgatggt 473
              ||||||||||||||||||||
Sbjct: 739652 gcttgttttgcaatgatggt 739633

---

>gb|AC112515.4| Homo sapiens chromosome 3 clone RP11-697B5, complete sequence
          Length = 179154

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 533   ctgaaaatgtagaacggagt 552
             ||||||||||||||||||||
Sbjct: 42976 ctgaaaatgtagaacggagt 42995

---

>emb|AJ617016.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np169
          Length = 186

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 308 cttacattgacagtcctatgcctattggttacaatgcaacaatatctgctcctcacatgc 367
           |||||||||| || || |||  ||| ||||||||||| || || || |||||||| ||||
Sbjct: 115 cttacattgatagccccatgagtataggttacaatgccactatctcagctcctcatatgc 174

               
Query: 368 atgc 371
           ||||
Sbjct: 175 atgc 178

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 7       gtcgccgccgctgcgtccgcctct 30
               |||||||||||| |||||||||||
Sbjct: 5094372 gtcgccgccgctccgtccgcctct 5094349

---

>ref|XM_392995.2| PREDICTED: Apis mellifera similar to protein-L-isoaspartate
           (D-aspartate) O-methyltransferase 1 (LOC409488), mRNA
          Length = 894

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 493 gtggggattgaacatattcctgaa 516
           ||||| ||||||||||||||||||
Sbjct: 361 gtgggaattgaacatattcctgaa 384

---

>gb|AC074117.7| Homo sapiens BAC clone RP11-413M20 from 2, complete sequence
          Length = 195880

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    atggaaactatcgacagagc 281
              ||||||||||||||||||||
Sbjct: 124019 atggaaactatcgacagagc 124000

---

>gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, complete sequence
          Length = 212775

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 580    tcactctctttttcatgttt 599
              ||||||||||||||||||||
Sbjct: 148987 tcactctctttttcatgttt 148968

---

>gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 176910

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcactctctttttcatgttt 599
             ||||||||||||||||||||
Sbjct: 40668 tcactctctttttcatgttt 40649


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,489,786
Number of Sequences: 3902068
Number of extensions: 4489786
Number of successful extensions: 97029
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 96817
Number of HSP's gapped (non-prelim): 211
length of query: 604
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 581
effective length of database: 17,143,297,704
effective search space: 9960255966024
effective search space used: 9960255966024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---