ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart18g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YME7_YEAST (Q04705) Hypothetical 41.4 kDa protein in GAL80-PRP39... 29 9.1

>YME7_YEAST (Q04705) Hypothetical 41.4 kDa protein in GAL80-PRP39 intergenic|
           region
          Length = 352

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 12/53 (22%), Positives = 32/53 (60%)
 Frame = +3

Query: 354 YCQNHLTGLVLFSWCKLMDPMTLLIASYLMLVVFTKPRLIVQKMLLQGLQIRM 512
           Y ++ +   +LFS+   +  ++ LI S ++ ++F +PR +  K  ++G ++++
Sbjct: 214 YEESVILSFMLFSFIIWVILISKLILSIIIFIIFIRPRFLSSKRKVKGYELKL 266


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,914,882
Number of Sequences: 219361
Number of extensions: 1170908
Number of successful extensions: 3591
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3590
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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