>Y207_AERPE (Q9YFP2) UPF0148 protein APE0207|
          Length = 129

 Score = 26.2 bits (56), Expect(2) = 5.0
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -3

Query: 187 EDQRSAGAEWCGVERSGRAALGDLREQRLADGRRRGDGEQEK 62
           ED     ++W GV  +    L   R  R   G  RG+G + K
Sbjct: 88  EDNVDTVSKWLGVLETAERILAIRRGSRQGQGSVRGEGRESK 129



 Score = 22.7 bits (47), Expect(2) = 5.0
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
 Frame = -1

Query: 234 VVCPLHG--VVMAGAERSR 184
           VVCP+HG  V++A  E +R
Sbjct: 45  VVCPVHGKVVIVASDEEAR 63

>EMBA_MYCTU (P0A560) Probable arabinosyltransferase A (EC 2.4.2.-)|
          Length = 1094

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = +2

Query: 152 TAPLSAGRPLVLDLSAPA---ITTPCSGQTTTVTLSANSTD 265
           TAPL +G P  LD+S P     T P +G     TL A   D
Sbjct: 59  TAPLVSGAPRALDISIPCSAIATLPANGGLVLSTLPAGGVD 99

>EMBA_MYCBO (P0A561) Probable arabinosyltransferase A (EC 2.4.2.-)|
          Length = 1094

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = +2

Query: 152 TAPLSAGRPLVLDLSAPA---ITTPCSGQTTTVTLSANSTD 265
           TAPL +G P  LD+S P     T P +G     TL A   D
Sbjct: 59  TAPLVSGAPRALDISIPCSAIATLPANGGLVLSTLPAGGVD 99

>COAT_GMDNV (Q90125) Coat protein VP1 (Structural protein VP1) [Contains: Coat|
           protein VP (Structural protein VP2); Coat protein VP3
           (Structural protein VP3); Coat protein VP4 (Structural
           protein VP4)]
          Length = 811

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 197 APAITTPCSGQTTTVTLSANSTDGSNPLS 283
           +PA+ TP    TT V +++ STD  NP S
Sbjct: 334 SPAVETPAKKGTTGVNVNSQSTDPQNPSS 362

>NFAC1_PIG (O77638) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT|
           transcription complex cytosolic component) (NF-ATc1)
           (NF-ATc) (NFATmac)
          Length = 822

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 19  ETQAENGAVQASSGASPARRLHG 87
           ET+   GAV+AS+G  P+ +LHG
Sbjct: 433 ETEGSRGAVKASAGGHPSVQLHG 455

>FMP1_PSEAE (P17838) Fimbrial protein precursor (Pilin) (Strain P1)|
          Length = 157

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +2

Query: 110 LTKITKSGASTALYTAPLSAGRPLVLDLSAPAITTPCSGQTTTVTLSANSTDGS 271
           + K+T  G      TA  S G  +V  + A  + TP  G+T T+TL  N+  GS
Sbjct: 85  VAKVTTGG------TAAASGGCTIVATMKASDVATPLRGKTLTLTL-GNADKGS 131

>ACS2_CANAL (Q8NJN3) Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA|
           ligase 2) (Acyl-activating enzyme 2) (Fragment)
          Length = 581

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 466 HAVAGEPGPAVAREAQRERVGHLLCFGHLSRERS 365
           HA A    PA+  EA  E+  H+L +G L RE S
Sbjct: 101 HAFANPDKPALICEADDEKDSHILTYGDLLREVS 134


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.131    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,728,967
Number of Sequences: 219361
Number of extensions: 842494
Number of successful extensions: 2310
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2304
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)