>ZN550_HUMAN (Q7Z398) Zinc finger protein 550|
          Length = 422

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 352 RPSERRPYNTIFTSKDPYLSGPMVQAF-HRTGCVRHNDAHAGVDPRRCRRRPKA 510
           R S    ++ I T + PY      +AF HR+  +RHN  H G  P  C+   KA
Sbjct: 270 RRSYLMQHHPIHTGEKPYECSQCRKAFTHRSTFIRHNRTHTGEKPFECKECEKA 323

>ZN485_HUMAN (Q8NCK3) Zinc finger protein 485|
          Length = 441

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +1

Query: 349 TRPSERRPYNTIFTSKDPYLSGPMVQAF-HRTGCVRHNDAHAGVDPRRCRRRPKAMP 516
           T+ S    +  I T + PY      +AF H +G V H   H G  P +C    KA P
Sbjct: 364 TKSSTLTGHQRIHTGEKPYHCKKCGKAFRHSSGLVEHQRLHTGEKPYKCNECGKAFP 420

>ZNF70_HUMAN (Q9UC06) Zinc finger protein 70 (Zinc finger protein N27C7-1)|
          Length = 446

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
 Frame = +1

Query: 235 DHSAGLFARRCDMHTLFLYANKGICKEDHQADLIRCPRTRPSERRPYNTIFTSKDPYLSG 414
           + S+GL   R  +HTL         K+ H+ DL        S    +  I T K PY   
Sbjct: 262 NQSSGLSQHR-KIHTL---------KKPHECDLCGKAFCHRSHLIRHQRIHTGKKPYKCD 311

Query: 415 PMVQAFHRTG-CVRHNDAHAGVDPRRCRRRPKA 510
              +AF ++   + H   H G  P +C++  KA
Sbjct: 312 ECGKAFSQSSNLIEHRKTHTGEKPYKCQKCGKA 344

>ZN599_HUMAN (Q96NL3) Zinc finger protein 599|
          Length = 588

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 382 IFTSKDPYLSGPMVQAF-HRTGCVRHNDAHAGVDPRRCRRRPKA 510
           I T + PY  G   +AF HR+  +RH   H G  P  C+   KA
Sbjct: 388 IHTGEKPYECGECGKAFTHRSTFIRHKRTHTGEKPFECKECGKA 431



 Score = 31.2 bits (69), Expect = 2.3
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 382 IFTSKDPYLSGPMVQAF-HRTGCVRHNDAHAGVDPRRCRRRPKA 510
           I T + PY      +AF H +  +RHN  H+G  P  C+   KA
Sbjct: 444 IHTGEKPYECSECGKAFTHHSVFIRHNRTHSGQKPLECKECAKA 487

>ZNF41_HUMAN (P51814) Zinc finger protein 41|
          Length = 821

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
 Frame = +1

Query: 349 TRPSERRPYNTIFTSKDPYLSGPMVQAF-HRTGCVRHNDAHAGVDPRRCRRRPKAMPAQ 522
           T+ S+   +  I T + PY+     + F HRT    H   H G  P  C    KA   Q
Sbjct: 519 TKKSQLHVHQRIHTGEKPYICTECGKVFTHRTNLTTHQKTHTGEKPYMCAECGKAFTDQ 577

>ZN167_HUMAN (Q9P0L1) Zinc finger protein 167 (Zinc finger protein 448) (ZFP)|
          Length = 754

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +1

Query: 340 CPRTRPSERR--PYNTIFTSKDPYLSGPMVQAFHRTGC-VRHNDAHAGVDPRRCRRRPKA 510
           C R   S R    +  I T + PY      +AF R+ C +RH   H G  P +C    KA
Sbjct: 528 CGRAFCSNRNLIDHQRIHTGEKPYECSECGKAFSRSKCLIRHQSLHTGEKPYKCSECGKA 587

>ZN101_HUMAN (Q8IZC7) Zinc finger protein 101 (Zinc finger protein HZF12)|
          Length = 436

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +1

Query: 325 ADLIRCPRTRPSERRPYNTIFTSKDPYLSGPMVQAFHRTGCVR-HNDAHAGVDPRRCRRR 501
           A + RCP +  +  R +    T + PY      + F+   C R H   H+G  P  C R 
Sbjct: 316 AKVFRCPTSLQAHERAH----TGERPYECNKCGKTFNYPSCFRRHKKTHSGEKPYECTRC 371

Query: 502 PKA 510
            KA
Sbjct: 372 GKA 374

>Y277_MYCGE (Q49409) Hypothetical protein MG277|
          Length = 970

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 32  LLCCRHPFAFFPVHGHCYSIHQHSILIAAAVYRVWLCRTASRGSTTV-SFNFWLPQLLK 205
           +L C   FA   +  + +SI Q +I +   VY  WL   A    TT  ++ +W  + LK
Sbjct: 797 ILLCSGLFAVMYLTNYLFSIDQSTIQLITFVYLFWLFFAAKVSQTTTWTYFYWFKRSLK 855

>ZN433_HUMAN (Q8N7K0) Zinc finger protein 433|
          Length = 673

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +1

Query: 358 SERRPYNTIFTSKDPYLSGPMVQAFHRTGCVR-HNDAHAGVDPRRCRRRPKA 510
           S  R +    T + PY      +AFH + C+  H   H G  P  C++  KA
Sbjct: 239 SSLRIHERTHTGEKPYKCNECGKAFHSSTCLHAHKRTHTGEKPYECKQCGKA 290

>ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1)|
          Length = 545

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 355 PSERRPYNTIFTSKDPYLSGPMVQAFHRTGCV----RHNDAHAGVDPRRCRRRPKA 510
           PS  R +  + T + PY+     +AF   GC     RH   H+GV P +C+   KA
Sbjct: 364 PSSLRAHMRMHTGEKPYVCKQCGKAF---GCPTYFRRHVKTHSGVKPYQCKECGKA 416

>ZN134_HUMAN (P52741) Zinc finger protein 134|
          Length = 348

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
 Frame = +1

Query: 274 HTLFLYANKGICKEDHQADLIRCPR--TRPSERRPYNTIFTSKDPYLSGPMVQAFHRTG- 444
           H   L  ++ I  E    + I C +  +R S+   +  + T + P++     + F RT  
Sbjct: 248 HKYTLIKHQRIHTESKPFECIECGKFFSRSSDYIAHQRVHTGERPFVCSKCGKDFIRTSH 307

Query: 445 CVRHNDAHAGVDPRRCRRRPKA 510
            VRH   H G  P  C    KA
Sbjct: 308 LVRHQRVHTGERPYECSECGKA 329

>ZNF14_MACFA (Q4R4C7) Zinc finger protein 14|
          Length = 642

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = +1

Query: 337 RCPRT--RPSERRPYNTIFTSKDPYLSGPMVQAFHRTGCVR-HNDAHAGVDPRRCRRRPK 507
           RC +   R S+ R +    T + PY      +AF  +   R H   H G  P RC++  K
Sbjct: 535 RCGKAFLRSSQIRLHERTHTGEKPYQCKQCGKAFISSSKFRMHERTHTGEKPYRCKQCGK 594

Query: 508 AMPAQRGSEAARTWSSAHT 564
           A    R S + R    +HT
Sbjct: 595 AF---RFSSSVRIHERSHT 610

>ZNF32_HUMAN (P17041) Zinc finger protein 32 (Zinc finger protein KOX30)|
           (C2H2-546)
          Length = 273

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 382 IFTSKDPYLSGPMVQAFHRTG-CVRHNDAHAGVDPRRCRRRPKAMPAQRGSEA 537
           + T   PY      ++FH  G C+ H   H G  P  C +  K+   QRGS A
Sbjct: 210 VHTGLKPYACTQCRKSFHTRGNCILHGKIHTGETPYLCGQCGKSF-TQRGSLA 261

>ZN480_HUMAN (Q8WV37) Zinc finger protein 480|
          Length = 516

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +1

Query: 382 IFTSKDPYLSGPMVQAFHRTGC-VRHNDAHAGVDPRRCRRRPKAMPAQRGSEAARTW 549
           I+T + PY      +AF+R    VRH   H G  P +C    K     + S  A+ W
Sbjct: 317 IYTGEKPYKCDECGKAFYRIALLVRHQKIHTGEKPYKCNECGKVF--IQNSHLAQHW 371

>RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3|
          Length = 219

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 296 IRASARRITKQTSSDVRGHVRRSGGRTTLYLPQ 394
           + A A  ITK+ S    GH+R++GGR   +L +
Sbjct: 58  MNAPAHTITKRVSKPKLGHLRKAGGRVFRFLKE 90

>ZN575_MACFA (Q9GM03) Zinc finger protein 575|
          Length = 260

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 29/103 (28%), Positives = 33/103 (32%), Gaps = 21/103 (20%)
 Frame = +1

Query: 343 PRTRPSERRPYNTIFTSKDPYLSGPMVQAFHRTG---------------------CVRHN 459
           PR RP  +RP+       D   S P   A HR                          H 
Sbjct: 68  PRRRPPPQRPHRC--PDCDKAFSYPSKLATHRLAHGGARPHPCPDCPKAFSYPSKLAAHR 125

Query: 460 DAHAGVDPRRCRRRPKAMPAQRGSEAARTWSSAHTHASRSRPC 588
             H+G  P  C   PKA    R   AA  W+ A T   R  PC
Sbjct: 126 LTHSGARPHPCPHCPKAF-GHRSKLAAHLWTHAPT---RPYPC 164

>ZNF14_PONPY (Q5R9F0) Zinc finger protein 14|
          Length = 642

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +1

Query: 352 RPSERRPYNTIFTSKDPYLSGPMVQAFHRTGCVR-HNDAHAGVDPRRCRRRPKAMPAQRG 528
           R S+ R +    T + PY      +AF  +   R H   H G  P RC++  KA    R 
Sbjct: 542 RSSQIRLHERTHTGEKPYQCKQCGKAFISSSKFRMHERTHTGEKPYRCKQCGKAF---RF 598

Query: 529 SEAARTWSSAHT 564
           S + R    +HT
Sbjct: 599 SSSVRIHERSHT 610

>ZNF14_HUMAN (P17017) Zinc finger protein 14 (Zinc finger protein KOX6)|
           (Gonadotropin-inducible transcription repressor 4)
           (GIOT-4)
          Length = 642

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +1

Query: 352 RPSERRPYNTIFTSKDPYLSGPMVQAFHRTGCVR-HNDAHAGVDPRRCRRRPKAMPAQRG 528
           R S+ R +    T + PY      +AF  +   R H   H G  P RC++  KA    R 
Sbjct: 542 RSSQIRLHERTHTGEKPYQCKQCGKAFISSSKFRMHERTHTGEKPYRCKQCGKAF---RF 598

Query: 529 SEAARTWSSAHT 564
           S + R    +HT
Sbjct: 599 SSSVRIHERSHT 610

>ZN696_HUMAN (Q9H7X3) Zinc finger protein 696|
          Length = 374

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 358 SERRPYNTIFTSKDPYLSGPMVQAF-HRTGCVRHNDAHAGVDPRRCRRRPKA 510
           S+   + +I + + PY      +AF H +  VRH  AH+G  P  C    KA
Sbjct: 138 SDAAKHRSIHSGEKPYECSDCGKAFIHSSHVVRHQRAHSGERPYACAECGKA 189

>ZNF74_HUMAN (Q16587) Zinc finger protein 74 (hZNF7)|
          Length = 643

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 382 IFTSKDPYLSGPMVQAFH-RTGCVRHNDAHAGVDPRRCRRRPKA 510
           + T + PY  G   +AF+ RT   RH+  H G  P +C    KA
Sbjct: 352 VHTGEKPYRCGECGKAFNQRTHLTRHHRIHTGEKPYQCGSCGKA 395

>ZN502_HUMAN (Q8TBZ5) Zinc finger protein 502|
          Length = 544

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 307 CKEDHQADLIRCPRTRPSERRPYNTIFTSKDPYLSGPMVQAFHRTGC-VRHNDAHAGVDP 483
           CKE  +A     P T+      +  I T + PY      +AF ++ C +RH  +H G  P
Sbjct: 381 CKECGKAFTQSTPLTK------HQRIHTGERPYKCSECGKAFIQSICLIRHQRSHTGEKP 434

Query: 484 RRC 492
            +C
Sbjct: 435 YKC 437

>ZN192_HUMAN (Q15776) Zinc finger protein 192 (LD5-1)|
          Length = 578

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
 Frame = +1

Query: 274 HTLFLYANKGICKEDHQADLIRCPRT--RPSERRPYNTIFTSKDPYLSGPMVQAF-HRTG 444
           H+  L  ++ I   +   +   C +T  R S    +    T + PY      +AF  ++G
Sbjct: 445 HSSHLIGHQRIHTGEKPYECDECGKTFRRSSHLIGHQRSHTGEKPYKCNECGRAFSQKSG 504

Query: 445 CVRHNDAHAGVDPRRCRRRPKAMPAQRG 528
            + H   H G  P +C+   KA     G
Sbjct: 505 LIEHQRIHTGERPYKCKECGKAFNGNTG 532

>ZFP14_HUMAN (Q9HCL3) Zinc finger protein 14 homolog (Zfp-14)|
          Length = 533

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +1

Query: 340 CPRT--RPSERRPYNTIFTSKDPYLSGPMVQAFH-RTGCVRHNDAHAGVDPRRCRRRPKA 510
           C +T  R S    +  I T + PY      QAF  R   +RH+  H G  P  C+   KA
Sbjct: 177 CRKTFIRRSTLSQHLRIHTGEKPYKCKECGQAFRQRAHLIRHHKLHTGEKPYECKECGKA 236

>ZN323_HUMAN (Q96LW9) Zinc finger protein 323|
          Length = 406

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +1

Query: 349 TRPSERRPYNTIFTSKDPYLSGPMVQAFHRTGCVR-HNDAHAGVDPRRCRRRPKAMPAQR 525
           T+ S    +  I T + PY      +AF R   +  H  +H G  P +C+   KA  A  
Sbjct: 249 TKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRSHTGEKPYQCKECGKAFSASN 308

Query: 526 G 528
           G
Sbjct: 309 G 309

>ZN501_PONPY (Q5RF70) Zinc finger protein 501|
          Length = 262

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 373 YNTIFTSKDPYLSGPMVQAFHRTGCV-RHNDAHAGVDPRRCRRRPKA 510
           +  I T + PY      +AF ++ C+ RH  +H+G  P +C    KA
Sbjct: 115 HQRIHTGEKPYKCAECGKAFSQSVCLTRHQRSHSGDKPFKCNECGKA 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,727,699
Number of Sequences: 219361
Number of extensions: 1847712
Number of successful extensions: 6284
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6260
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)