>5NG4_PINTA (Q6J163) Auxin-induced protein 5NG4|
          Length = 410

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
 Frame = +1

Query: 25  LASRDLPGVAMAMQEHKPL-AAMVVVQCIYAAMALWAKAMFSRGMSPMVFVVYRQAIATL 201
           +AS  +    + M E   L AAM+ +Q  YA   + ++A  + G+S +VF VYR  +A +
Sbjct: 1   MASNIMQRCNVFMSERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALM 60

Query: 202 VLVPITLLANRKRLREIVCIGTTGFAL-VFLASLVGATANQYMYYQGMYLGSSSMATAMT 378
           ++ P      +K    +    T  F +  FL +L G T    +    + L   + A+A+ 
Sbjct: 61  LIGPCAYFLEKKERPAL----TLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQ 116

Query: 379 NLIPAITFVLATSVCLESVEIRKPRSMAKVFGTAVCVGG 495
           N +PAITF++A ++ LE V I +   +AK+ GT  CV G
Sbjct: 117 NSVPAITFIMAAALRLEKVHISRRDGLAKIIGTVACVSG 155

>FOXD4_HUMAN (Q12950) Forkhead box protein D4 (Forkhead-related protein FKHL9)|
           (Forkhead-related transcription factor 5) (FREAC-5)
           (Myeloid factor-alpha)
          Length = 439

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 23/88 (26%), Positives = 33/88 (37%)
 Frame = +3

Query: 198 PCPRPHHLACQQEKAEGDCLHRNDGLRAGVLGLSCRGDGESVHVLPRHVPGIIVHGDGHD 377
           PC  PH +     +A     HR        L +SC+G GE V  L R  P       G  
Sbjct: 293 PCCSPHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCP----RPRGAT 348

Query: 378 EPYTGDHLRAGDVSMSRKRGDQEAAKHG 461
            P + D      +   ++R  +E   +G
Sbjct: 349 APCSSDRQACRTILQQQQRHQEEDCANG 376

>YYAM_BACSU (P37511) Hypothetical transport protein yyaM|
          Length = 305

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
 Frame = +1

Query: 142 FSRGMSPMVFVVYRQAIATLVLVPITLLANRKRLREIVCIGTTGFALVFLASLVGATANQ 321
           F +  +P+    Y   I  + L+ ++L  ++      + IG  G A+ F+A         
Sbjct: 176 FVKDGTPLSTTTYTMVIGAVSLIVVSLFTSKPVSLSNIPIGVWG-AIAFMAFFTSVLG-- 232

Query: 322 YMYY-QGMYLGSSSMATAMTNLIPAITFVLATSV 420
           Y+++ QG+    +S  +   NL+P +T +++ +V
Sbjct: 233 YLWWNQGIKEIGASKTSLFFNLVPVVTMIISFAV 266

>Y2353_MYCBO (P63400) Hypothetical ABC transporter ATP-binding protein Mb2353c|
          Length = 697

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 30/112 (26%), Positives = 40/112 (35%), Gaps = 4/112 (3%)
 Frame = +1

Query: 4   CNRPPTRLASRDLPGVAMAMQEHKPLAAMVVVQCIYAAMALWAKAMFSRGMSPMVFVVYR 183
           C   P R+      G   A     PL    + Q    A      A+ S      V V + 
Sbjct: 6   CGPEPGRIGEVTPLGPCPAQHRGGPLRPSELAQASVMAALCAVTAIIS------VVVPFA 59

Query: 184 QAIATLVLVPITLLANRKRLREI----VCIGTTGFALVFLASLVGATANQYM 327
             +A L  VP  LLA R RLR +    V  G   F +  L   +G   + Y+
Sbjct: 60  AGLALLGTVPTGLLAYRYRLRVLAAATVAAGMIAFLIAGLGGFMGVVHSAYI 111

>Y2326_MYCTU (P63399) Hypothetical ABC transporter ATP-binding protein|
           Rv2326c/MT2388
          Length = 697

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 30/112 (26%), Positives = 40/112 (35%), Gaps = 4/112 (3%)
 Frame = +1

Query: 4   CNRPPTRLASRDLPGVAMAMQEHKPLAAMVVVQCIYAAMALWAKAMFSRGMSPMVFVVYR 183
           C   P R+      G   A     PL    + Q    A      A+ S      V V + 
Sbjct: 6   CGPEPGRIGEVTPLGPCPAQHRGGPLRPSELAQASVMAALCAVTAIIS------VVVPFA 59

Query: 184 QAIATLVLVPITLLANRKRLREI----VCIGTTGFALVFLASLVGATANQYM 327
             +A L  VP  LLA R RLR +    V  G   F +  L   +G   + Y+
Sbjct: 60  AGLALLGTVPTGLLAYRYRLRVLAAATVAAGMIAFLIAGLGGFMGVVHSAYI 111

>GAG_MLVFP (P26805) Gag polyprotein (Core polyprotein) [Contains: Matrix|
           protein p15; RNA-binding phosphoprotein p12; Capsid
           protein p30; Nucleocapsid protein p10]
          Length = 537

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = -2

Query: 414 RRQHEGDRRYKVRHGRRHGR*SQVHALVVHVLIRRRPDKRGQEHQR 277
           RR+ E +RR K R  RRH   S++ A VV     +R D++G E +R
Sbjct: 453 RRRAEDERREKERDRRRHREMSKLLATVVS---GQRQDRQGGERRR 495

>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 26.6 bits (57), Expect(2) = 7.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 147  PRHEPHGLRRLQAGHRHPCPRPHH 218
            PR  PH   R +A HR P   PHH
Sbjct: 1217 PRPHPH---RPRASHRAPAAAPHH 1237



 Score = 20.8 bits (42), Expect(2) = 7.0
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 92   WWCSASTRPWRSGPRP 139
            WW      PW +GP P
Sbjct: 1194 WWAPPPP-PWAAGPPP 1208

>ARMX1_MOUSE (Q9CX83) Armadillo repeat-containing X-linked protein 1|
          Length = 456

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
 Frame = +3

Query: 228 QQEKAEGDCLHRNDGLRAGVLGLSCRG----DGES---VHVLPRHVPGIIVHGDGHDEPY 386
           ++E+ E  C  + +      +G+  RG    D +S   V+V P + PG  V  + H E  
Sbjct: 45  EEEEEEKSCSDKTEKELKTNVGVGARGKPQDDSKSKVEVNVGPENGPG--VKKEVHPESQ 102

Query: 387 TGDHLRAGDVSMSRKRGDQEAAKHGQGI 470
           +G  L A   ++ +   +Q  AK G+GI
Sbjct: 103 SGGGLEAKAKALFKTLKEQARAKAGRGI 130

>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1006

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 358 TMIPGTCLGSTCTDSPSPRQERPRTPARSPSFRCKQSP 245
           T  PG   G T    P P  + PR+P+RSPS    +SP
Sbjct: 326 TFRPGAPSGQTV---PPPLPKPPRSPSRSPSHSPNRSP 360


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,184,041
Number of Sequences: 219361
Number of extensions: 1325500
Number of successful extensions: 5216
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5194
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)