Clone Name | bart18b12 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Minus Query: 82 gcggccatggtggtggtgcagtgcatctacgcggccatggcgctctgggccaaggccatg 141 ||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 15401190 gcggcgatggtggcggcgcagtgcatctacgcggccatgacgctctgggccaaggccatg 15401131 Query: 142 ttcagccgcggcatgagccccatggtcttcgtcgtctacaggcaggccatcgccaccctt 201 ||| |||| ||| | |||||| || |||||||||||||| | |||||||||| |||||| Sbjct: 15401130 ttcggccgtggcgtcagccccgtgatcttcgtcgtctaccgccaggccatcggcaccctc 15401071 Query: 202 gtcctcgtccccatcaccttgcttgccaacagg 234 |||||||||||||||||| | || ||||||||| Sbjct: 15401070 gtcctcgtccccatcaccctcctcgccaacagg 15401038 Score = 147 bits (74), Expect = 4e-32 Identities = 119/134 (88%) Strand = Plus / Minus Query: 82 gcggccatggtggtggtgcagtgcatctacgcggccatggcgctctgggccaaggccatg 141 ||||| ||||||| || |||||||||||||||||| |||||||||||||||||||| || Sbjct: 15414070 gcggcgatggtggcggcgcagtgcatctacgcggcgctggcgctctgggccaaggccgtg 15414011 Query: 142 ttcagccgcggcatgagccccatggtcttcgtcgtctacaggcaggccatcgccaccctt 201 |||| | | ||||||||| |||||||||||||||||||| | ||||||||||||||| | Sbjct: 15414010 ttcaccgggggcatgagcaccatggtcttcgtcgtctaccgccaggccatcgccaccgtc 15413951 Query: 202 gtcctcgtccccat 215 ||||||||||||| Sbjct: 15413950 ttcctcgtccccat 15413937 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 326 tgtactaccaaggcatgtacctgggatcatcgtccatggcgacggccatgacgaacctta 385 |||||||||| ||| || | |||||||| ||||| |||||||||||||||| ||||| | Sbjct: 15413270 tgtactaccagggcctgcatctgggatcgtcgtcgatggcgacggccatgagcaacctga 15413211 Query: 386 taccggcgatcaccttcgtgctggcgacgtcagta 420 |||| ||||||||||||||| |||| |||||||| Sbjct: 15413210 tacccgcgatcaccttcgtgatggcagcgtcagta 15413176 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 458 tggccaaggtattcggcaccgccgtctgcgtcggagg 494 |||| ||| ||||||||||| |||||||||||||||| Sbjct: 15411332 tggcgaagatattcggcaccaccgtctgcgtcggagg 15411296 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tccatggcgacggccatgac 377 |||||||||||||||||||| Sbjct: 15400576 tccatggcgacggccatgac 15400557
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1299_A11 Length = 160099 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Minus Query: 82 gcggccatggtggtggtgcagtgcatctacgcggccatggcgctctgggccaaggccatg 141 ||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 50482 gcggcgatggtggcggcgcagtgcatctacgcggccatgacgctctgggccaaggccatg 50423 Query: 142 ttcagccgcggcatgagccccatggtcttcgtcgtctacaggcaggccatcgccaccctt 201 ||| |||| ||| | |||||| || |||||||||||||| | |||||||||| |||||| Sbjct: 50422 ttcggccgtggcgtcagccccgtgatcttcgtcgtctaccgccaggccatcggcaccctc 50363 Query: 202 gtcctcgtccccatcaccttgcttgccaacagg 234 |||||||||||||||||| | || ||||||||| Sbjct: 50362 gtcctcgtccccatcaccctcctcgccaacagg 50330 Score = 147 bits (74), Expect = 4e-32 Identities = 119/134 (88%) Strand = Plus / Minus Query: 82 gcggccatggtggtggtgcagtgcatctacgcggccatggcgctctgggccaaggccatg 141 ||||| ||||||| || |||||||||||||||||| |||||||||||||||||||| || Sbjct: 63362 gcggcgatggtggcggcgcagtgcatctacgcggcgctggcgctctgggccaaggccgtg 63303 Query: 142 ttcagccgcggcatgagccccatggtcttcgtcgtctacaggcaggccatcgccaccctt 201 |||| | | ||||||||| |||||||||||||||||||| | ||||||||||||||| | Sbjct: 63302 ttcaccgggggcatgagcaccatggtcttcgtcgtctaccgccaggccatcgccaccgtc 63243 Query: 202 gtcctcgtccccat 215 ||||||||||||| Sbjct: 63242 ttcctcgtccccat 63229 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 326 tgtactaccaaggcatgtacctgggatcatcgtccatggcgacggccatgacgaacctta 385 |||||||||| ||| || | |||||||| ||||| |||||||||||||||| ||||| | Sbjct: 62562 tgtactaccagggcctgcatctgggatcgtcgtcgatggcgacggccatgagcaacctga 62503 Query: 386 taccggcgatcaccttcgtgctggcgacgtcagta 420 |||| ||||||||||||||| |||| |||||||| Sbjct: 62502 tacccgcgatcaccttcgtgatggcagcgtcagta 62468 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 458 tggccaaggtattcggcaccgccgtctgcgtcggagg 494 |||| ||| ||||||||||| |||||||||||||||| Sbjct: 60624 tggcgaagatattcggcaccaccgtctgcgtcggagg 60588 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tccatggcgacggccatgac 377 |||||||||||||||||||| Sbjct: 49868 tccatggcgacggccatgac 49849
>dbj|AK105859.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-H10, full insert sequence Length = 1716 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 82 gcggccatggtggtggtgcagtgcatctacgcggccatggcgctctgggccaaggccatg 141 ||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 172 gcggcgatggtggcggcgcagtgcatctacgcggccatgacgctctgggccaaggccatg 231 Query: 142 ttcagccgcggcatgagccccatggtcttcgtcgtctacaggcaggccatcgccaccctt 201 ||| |||| ||| | |||||| || |||||||||||||| | |||||||||| |||||| Sbjct: 232 ttcggccgtggcgtcagccccgtgatcttcgtcgtctaccgccaggccatcggcaccctc 291 Query: 202 gtcctcgtccccatcaccttgcttgccaacagg 234 |||||||||||||||||| | || ||||||||| Sbjct: 292 gtcctcgtccccatcaccctcctcgccaacagg 324 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tccatggcgacggccatgac 377 |||||||||||||||||||| Sbjct: 671 tccatggcgacggccatgac 690
>dbj|AK068810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159I18, full insert sequence Length = 1205 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 82 gcggccatggtggtggtgcagtgcatctacgcggccatggcgctctgggccaaggccatg 141 ||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 173 gcggcgatggtggcggcgcagtgcatctacgcggccatgacgctctgggccaaggccatg 232 Query: 142 ttcagccgcggcatgagccccatggtcttcgtcgtctacaggcaggccatcgccaccctt 201 ||| |||| ||| | |||||| || |||||||||||||| | |||||||||| |||||| Sbjct: 233 ttcggccgtggcgtcagccccgtgatcttcgtcgtctaccgccaggccatcggcaccctc 292 Query: 202 gtcctcgtccccatcaccttgcttgccaacagg 234 |||||||||||||||||| | || ||||||||| Sbjct: 293 gtcctcgtccccatcaccctcctcgccaacagg 325 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tccatggcgacggccatgac 377 |||||||||||||||||||| Sbjct: 453 tccatggcgacggccatgac 472
>dbj|AK070341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050L03, full insert sequence Length = 3713 Score = 147 bits (74), Expect = 4e-32 Identities = 119/134 (88%) Strand = Plus / Plus Query: 82 gcggccatggtggtggtgcagtgcatctacgcggccatggcgctctgggccaaggccatg 141 ||||| ||||||| || |||||||||||||||||| |||||||||||||||||||| || Sbjct: 2401 gcggcgatggtggcggcgcagtgcatctacgcggcgctggcgctctgggccaaggccgtg 2460 Query: 142 ttcagccgcggcatgagccccatggtcttcgtcgtctacaggcaggccatcgccaccctt 201 |||| | | ||||||||| |||||||||||||||||||| | ||||||||||||||| | Sbjct: 2461 ttcaccgggggcatgagcgccatggtcttcgtcgtctaccgccaggccatcgccaccgtc 2520 Query: 202 gtcctcgtccccat 215 ||||||||||||| Sbjct: 2521 ttcctcgtccccat 2534 Score = 105 bits (53), Expect = 1e-19 Identities = 140/169 (82%) Strand = Plus / Plus Query: 326 tgtactaccaaggcatgtacctgggatcatcgtccatggcgacggccatgacgaacctta 385 |||||||||| ||| || | |||||||| ||||| |||||||||||||||| ||||| | Sbjct: 2642 tgtactaccagggcctgcatctgggatcgtcgtcgatggcgacggccatgagcaacctga 2701 Query: 386 taccggcgatcaccttcgtgctggcgacgtcagtatgtctagaaagcgtggagatcagga 445 |||| ||||||||||||||| |||| |||||||| | ||||||| ||||| |||||| Sbjct: 2702 tacccgcgatcaccttcgtgatggcagcgtcagtaggactagaaaaggtggacctcagga 2761 Query: 446 agccgcgaagcatggccaaggtattcggcaccgccgtctgcgtcggagg 494 | | ||| |||| ||| ||||||||||| |||||||||||||||| Sbjct: 2762 gagtgaggagcttggcgaagatattcggcaccaccgtctgcgtcggagg 2810
>gb|AY108260.1| Zea mays PCO082493 mRNA sequence Length = 838 Score = 125 bits (63), Expect = 1e-25 Identities = 183/223 (82%) Strand = Plus / Plus Query: 267 gacgggcttcgcgctggtgttcttggcctctcttgtcggggcgacggcgaatcagtacat 326 |||||||||| ||||||| ||| | ||||| ||||||||||| |||| ||| |||| ||| Sbjct: 287 gacgggcttctcgctggtcttcgtcgcctcccttgtcggggcaacggtgaaccagtgcat 346 Query: 327 gtactaccaaggcatgtacctgggatcatcgtccatggcgacggccatgacgaaccttat 386 |||||||||||| || | ||||| || ||||||||||| ||||||||||| ||| | || Sbjct: 347 gtactaccaaggggtgaatctgggctcgtcgtccatggcaacggccatgaccaacttgat 406 Query: 387 accggcgatcaccttcgtgctggcgacgtcagtatgtctagaaagcgtggagatcaggaa 446 || || ||||||||||| ||||| | ||||| | ||||| || |||||| ||||| Sbjct: 407 ccccgccatcaccttcgtcatggcggcatcagtcggcctagagagggtggaggccaggag 466 Query: 447 gccgcgaagcatggccaaggtattcggcaccgccgtctgcgtc 489 |||| | ||| |||||||| | |||||||| |||||||||||| Sbjct: 467 gccgaggagcctggccaagatcttcggcacggccgtctgcgtc 509 Score = 119 bits (60), Expect = 9e-24 Identities = 114/132 (86%) Strand = Plus / Plus Query: 82 gcggccatggtggtggtgcagtgcatctacgcggccatggcgctctgggccaaggccatg 141 ||||||||||||||| ||||||||||||||| || | ||||||| | ||||||| | Sbjct: 99 gcggccatggtggtgacgcagtgcatctacgccgctctagcgctcttgtccaaggcggcg 158 Query: 142 ttcagccgcggcatgagccccatggtcttcgtcgtctacaggcaggccatcgccaccctt 201 |||| | |||||||||||||| |||| ||||||||||||||||||||| |||||||| || Sbjct: 159 ttcaccggcggcatgagccccctggtgttcgtcgtctacaggcaggccgtcgccaccatt 218 Query: 202 gtcctcgtcccc 213 || ||||||||| Sbjct: 219 gtactcgtcccc 230
>emb|BX571870.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 12/17 Length = 348505 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 48 cgttgccatggccatgcaggagcataagccgctgg 82 |||| ||||| ||||||||||||||||| |||||| Sbjct: 227941 cgtttccatgaccatgcaggagcataaggcgctgg 227907
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 40 ctcccgggcgttgccatggccatgcaggagcataagccgctgg 82 ||||||| ||| ||||| ||||||||||||||||| |||||| Sbjct: 1399833 ctcccggacgtctccatgaccatgcaggagcataaggcgctgg 1399875
>ref|XM_474441.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1239 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 73 aagccgctggcggccatggtggtggtgcag 102 |||||| ||||||| ||||||||||||||| Sbjct: 31 aagccggtggcggcgatggtggtggtgcag 60
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 73 aagccgctggcggccatggtggtggtgcag 102 |||||| ||||||| ||||||||||||||| Sbjct: 139512 aagccggtggcggcgatggtggtggtgcag 139541
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 73 aagccgctggcggccatggtggtggtgcag 102 |||||| ||||||| ||||||||||||||| Sbjct: 110031 aagccggtggcggcgatggtggtggtgcag 110002
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 73 aagccgctggcggccatggtggtggtgcag 102 |||||| ||||||| ||||||||||||||| Sbjct: 35203000 aagccggtggcggcgatggtggtggtgcag 35203029
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 355 tcgtccatggcgacggccatgacgaa 380 ||||||||||||||||| |||||||| Sbjct: 480120 tcgtccatggcgacggctatgacgaa 480145
>dbj|AK107360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-A04, full insert sequence Length = 1551 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 73 aagccgctggcggccatggtggtggtgcag 102 |||||| ||||||| ||||||||||||||| Sbjct: 38 aagccggtggcggcgatggtggtggtgcag 67
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 73 aagccgctggcggccatggtggtggtgcag 102 |||||| ||||||| ||||||||||||||| Sbjct: 47015 aagccggtggcggcgatggtggtggtgcag 47044
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 469 ttcggcaccgccgtctgcgtcggag 493 |||||||||||||||||| |||||| Sbjct: 2366669 ttcggcaccgccgtctgcttcggag 2366693
>ref|NM_001031518.1| Gallus gallus somatostatin receptor 4 (SSTR4), mRNA Length = 1228 Score = 40.1 bits (20), Expect = 6.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 78 gctggcggccatggtggtggtgcagtgcatctacgc 113 |||||| | |||||||||| | |||||||||||||| Sbjct: 148 gctggcaggcatggtggtgatccagtgcatctacgc 183
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gcggccatggtggtggtgca 101 |||||||||||||||||||| Sbjct: 4713922 gcggccatggtggtggtgca 4713903
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ctcgtccccatcaccttgcttgcc 228 |||||||||| ||||||||||||| Sbjct: 1946764 ctcgtccccaccaccttgcttgcc 1946741
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 catggcgctctgggccaaggccat 140 |||| ||||||||||||||||||| Sbjct: 140444 catgtcgctctgggccaaggccat 140467
>gb|AC144734.1| Oryza sativa (japonica cultivar-group) chromosome 11 plasmid clone OSJNBa0026O24_C01, complete sequence Length = 2105 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 ctctgggccaaggccatgttcagc 147 ||||||||||||| |||||||||| Sbjct: 804 ctctgggccaaggacatgttcagc 781
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tctacgcggccatggcgctc 126 |||||||||||||||||||| Sbjct: 2508469 tctacgcggccatggcgctc 2508450 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggccatggtggtggtgcag 102 |||||||||||||||||||| Sbjct: 1664299 cggccatggtggtggtgcag 1664318
>gb|AC087311.23| Homo sapiens 12 BAC RP11-267D19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159688 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ctcccgggcgttgccatggc 59 |||||||||||||||||||| Sbjct: 91439 ctcccgggcgttgccatggc 91458
>gb|AC092357.2| Homo sapiens chromosome 16 clone RP11-332P24, complete sequence Length = 191768 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctggcggccatggtggtggtgcag 102 ||||||||| |||||||||||||| Sbjct: 68035 ctggcggccctggtggtggtgcag 68058
>gb|DQ069274.1| Gallus gallus somatostatin receptor type 4 precursor (SS4R) mRNA, complete cds Length = 1228 Score = 40.1 bits (20), Expect = 6.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 78 gctggcggccatggtggtggtgcagtgcatctacgc 113 |||||| | |||||||||| | |||||||||||||| Sbjct: 148 gctggcaggcatggtggtgatccagtgcatctacgc 183
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 ctctgggccaaggccatgttcagc 147 ||||||||||||| |||||||||| Sbjct: 26946024 ctctgggccaaggacatgttcagc 26946001
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gccatggccatgcaggagca 71 |||||||||||||||||||| Sbjct: 21988714 gccatggccatgcaggagca 21988733
>gb|AC016761.10| Homo sapiens BAC clone RP11-538A12 from 2, complete sequence Length = 159338 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 aacaggaaaaggctgaggga 248 |||||||||||||||||||| Sbjct: 85290 aacaggaaaaggctgaggga 85271
>gb|AC009236.4| Homo sapiens BAC clone RP11-421J10 from 2, complete sequence Length = 178911 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gtcctcgtccccatcacctt 221 |||||||||||||||||||| Sbjct: 5695 gtcctcgtccccatcacctt 5676
>gb|AC018558.6| Homo sapiens chromosome 16 clone RP11-80F22, complete sequence Length = 151051 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctggcggccatggtggtggtgcag 102 ||||||||| |||||||||||||| Sbjct: 118292 ctggcggccctggtggtggtgcag 118315
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046L23 Length = 100041 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gccatggccatgcaggagca 71 |||||||||||||||||||| Sbjct: 37336 gccatggccatgcaggagca 37355
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 ctctgggccaaggccatgttcagc 147 ||||||||||||| |||||||||| Sbjct: 27273077 ctctgggccaaggacatgttcagc 27273054 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,469,633 Number of Sequences: 3902068 Number of extensions: 3469633 Number of successful extensions: 66283 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65717 Number of HSP's gapped (non-prelim): 566 length of query: 496 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 474 effective length of database: 17,147,199,772 effective search space: 8127772691928 effective search space used: 8127772691928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)