ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart18b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_463421.1| Oryza sativa (japonica cultivar-group), predic... 139 1e-29
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
3dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
4dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
5ref|XM_468692.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 72 2e-09
7gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genom... 72 2e-09
8gb|AY328909.1| Oryza sativa (japonica cultivar-group) BRITTLE CU... 72 2e-09
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 1.9
11gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z21... 42 1.9
12ref|XM_493889.1| Oryza sativa (japonica cultivar-group), predic... 40 7.4
13gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
14ref|XM_415463.1| PREDICTED: Gallus gallus similar to Proto-oncog... 40 7.4
15gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 7.4
16gb|AC146193.3| Pan troglodytes BAC clone CH251-483N24 from Y, co... 40 7.4
17gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 7.4
18gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.4
19emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.4
20emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 40 7.4
21dbj|BS000596.1| Pan troglodytes chromosome Y clone:PTB-130H13, c... 40 7.4
22gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.4
23dbj|AK138761.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 7.4
24dbj|AK163774.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 7.4
25gb|AC151479.4| Pan troglodytes BAC clone CH251-656P8 from chromo... 40 7.4
26gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01,... 40 7.4
27gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 7.4
28dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
29gb|AY083680.1| Avena sativa clone OP9 receptor kinase gene clust... 40 7.4
30dbj|AB022053.2| Mus musculus gene for prolyl oligopeptidase, com... 40 7.4
31gb|AC007284.4|AC007284 Homo sapiens BAC clone RP11-558K21 from Y... 40 7.4
32gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Can... 40 7.4
33dbj|AK073169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
34dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene clust... 40 7.4

>ref|XM_463421.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1455

 Score =  139 bits (70), Expect = 1e-29
 Identities = 159/188 (84%), Gaps = 3/188 (1%)
 Strand = Plus / Plus

                                                                       
Query: 224 gtgctctacccgtcgccgggcatggggcatccggtctccatgatcgagctcggcaagctc 283
           |||||||||||||||||||||||||| || | ||||||||||||||||||||||||| | 
Sbjct: 46  gtgctctacccgtcgccgggcatgggccacctggtctccatgatcgagctcggcaaggtg 105

                                                                       
Query: 284 ttcgccgcccgtgggctggccgtcacggtcgccctcatggactcgccgcacg---acacc 340
           ||||||||||| || || |||||||| |||| | || | ||| | ||| |||   |||||
Sbjct: 106 ttcgccgcccgcggcctcgccgtcaccgtcgtcgtcgtcgacccaccgtacggcaacacc 165

                                                                       
Query: 341 agcgccacgggccccttcctcgccggtgtctccgcggccaaccccgccatctccttccac 400
            |||| ||||| || ||||||||||| ||| ||||||||||||| |||||  | ||||||
Sbjct: 166 ggcgcgacggggcctttcctcgccggcgtcaccgcggccaacccggccatgacgttccac 225

                   
Query: 401 cgtctgcc 408
           ||||||||
Sbjct: 226 cgtctgcc 233



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Plus

                                                                       
Query: 449 accttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcgacgcc 508
           |||||||||||| ||||||||||||||||   |||||| |||||||||||||||| | ||
Sbjct: 280 accttcgaggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctcc 339

                                                  
Query: 509 ccgggcgtcatcgtgctggacttcttctgcagcgccgcc 547
           |||| |||| || |  | ||||||||||||| |||||||
Sbjct: 340 ccggtcgtcctcatcatcgacttcttctgcaacgccgcc 378



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  139 bits (70), Expect = 1e-29
 Identities = 159/188 (84%), Gaps = 3/188 (1%)
 Strand = Plus / Minus

                                                                            
Query: 224      gtgctctacccgtcgccgggcatggggcatccggtctccatgatcgagctcggcaagctc 283
                |||||||||||||||||||||||||| || | ||||||||||||||||||||||||| | 
Sbjct: 28842871 gtgctctacccgtcgccgggcatgggccacctggtctccatgatcgagctcggcaaggtg 28842812

                                                                            
Query: 284      ttcgccgcccgtgggctggccgtcacggtcgccctcatggactcgccgcacg---acacc 340
                ||||||||||| || || |||||||| |||| | || | ||| | ||| |||   |||||
Sbjct: 28842811 ttcgccgcccgcggcctcgccgtcaccgtcgtcgtcgtcgacccaccgtacggcaacacc 28842752

                                                                            
Query: 341      agcgccacgggccccttcctcgccggtgtctccgcggccaaccccgccatctccttccac 400
                 |||| ||||| || ||||||||||| ||| ||||||||||||| |||||  | ||||||
Sbjct: 28842751 ggcgcgacggggcctttcctcgccggcgtcaccgcggccaacccggccatgacgttccac 28842692

                        
Query: 401      cgtctgcc 408
                ||||||||
Sbjct: 28842691 cgtctgcc 28842684



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                            
Query: 449      accttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcgacgcc 508
                |||||||||||| ||||||||||||||||   |||||| |||||||||||||||| | ||
Sbjct: 28842637 accttcgaggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctcc 28842578

                                                       
Query: 509      ccgggcgtcatcgtgctggacttcttctgcagcgccgcc 547
                |||| |||| || |  | ||||||||||||| |||||||
Sbjct: 28842577 ccggtcgtcctcatcatcgacttcttctgcaacgccgcc 28842539



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>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_H09
          Length = 110086

 Score =  139 bits (70), Expect = 1e-29
 Identities = 159/188 (84%), Gaps = 3/188 (1%)
 Strand = Plus / Minus

                                                                         
Query: 224   gtgctctacccgtcgccgggcatggggcatccggtctccatgatcgagctcggcaagctc 283
             |||||||||||||||||||||||||| || | ||||||||||||||||||||||||| | 
Sbjct: 60914 gtgctctacccgtcgccgggcatgggccacctggtctccatgatcgagctcggcaaggtg 60855

                                                                         
Query: 284   ttcgccgcccgtgggctggccgtcacggtcgccctcatggactcgccgcacg---acacc 340
             ||||||||||| || || |||||||| |||| | || | ||| | ||| |||   |||||
Sbjct: 60854 ttcgccgcccgcggcctcgccgtcaccgtcgtcgtcgtcgacccaccgtacggcaacacc 60795

                                                                         
Query: 341   agcgccacgggccccttcctcgccggtgtctccgcggccaaccccgccatctccttccac 400
              |||| ||||| || ||||||||||| ||| ||||||||||||| |||||  | ||||||
Sbjct: 60794 ggcgcgacggggcctttcctcgccggcgtcaccgcggccaacccggccatgacgttccac 60735

                     
Query: 401   cgtctgcc 408
             ||||||||
Sbjct: 60734 cgtctgcc 60727



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                         
Query: 449   accttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcgacgcc 508
             |||||||||||| ||||||||||||||||   |||||| |||||||||||||||| | ||
Sbjct: 60680 accttcgaggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctcc 60621

                                                    
Query: 509   ccgggcgtcatcgtgctggacttcttctgcagcgccgcc 547
             |||| |||| || |  | ||||||||||||| |||||||
Sbjct: 60620 ccggtcgtcctcatcatcgacttcttctgcaacgccgcc 60582



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>dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114N14, full
           insert sequence
          Length = 1727

 Score =  139 bits (70), Expect = 1e-29
 Identities = 159/188 (84%), Gaps = 3/188 (1%)
 Strand = Plus / Plus

                                                                       
Query: 224 gtgctctacccgtcgccgggcatggggcatccggtctccatgatcgagctcggcaagctc 283
           |||||||||||||||||||||||||| || | ||||||||||||||||||||||||| | 
Sbjct: 107 gtgctctacccgtcgccgggcatgggccacctggtctccatgatcgagctcggcaaggtg 166

                                                                       
Query: 284 ttcgccgcccgtgggctggccgtcacggtcgccctcatggactcgccgcacg---acacc 340
           ||||||||||| || || |||||||| |||| | || | ||| | ||| |||   |||||
Sbjct: 167 ttcgccgcccgcggcctcgccgtcaccgtcgtcgtcgtcgacccaccgtacggcaacacc 226

                                                                       
Query: 341 agcgccacgggccccttcctcgccggtgtctccgcggccaaccccgccatctccttccac 400
            |||| ||||| || ||||||||||| ||| ||||||||||||| |||||  | ||||||
Sbjct: 227 ggcgcgacggggcctttcctcgccggcgtcaccgcggccaacccggccatgacgttccac 286

                   
Query: 401 cgtctgcc 408
           ||||||||
Sbjct: 287 cgtctgcc 294



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Plus

                                                                       
Query: 449 accttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcgacgcc 508
           |||||||||||| ||||||||||||||||   |||||| |||||||||||||||| | ||
Sbjct: 341 accttcgaggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctcc 400

                                                  
Query: 509 ccgggcgtcatcgtgctggacttcttctgcagcgccgcc 547
           |||| |||| || |  | ||||||||||||| |||||||
Sbjct: 401 ccggtcgtcctcatcatcgacttcttctgcaacgccgcc 439



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>ref|XM_468692.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 459

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 444 tgctgaccttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcg 503
           |||| |||||||||||| ||||||||||||||||   |||||| ||||||||||||||||
Sbjct: 317 tgcttaccttcgaggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcg 376



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 243 gcatggggcatccggtctccatgatcgagctcggcaagctcttcgccgcccgtgggctgg 302
           ||||||| || | |||||||||||||||| |||||||| | ||||||||||| || || |
Sbjct: 107 gcatgggccacctggtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcg 166

                       
Query: 303 ccgtcacggtcg 314
           ||||||| ||||
Sbjct: 167 ccgtcaccgtcg 178



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 356 ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408
           |||||| |||| ||| ||||||||||||| |||||  | ||||||||||||||
Sbjct: 223 ttcctcaccggcgtcaccgcggccaacccggccatgacgttccaccgtctgcc 275



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 444      tgctgaccttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcg 503
                |||| |||||||||||| ||||||||||||||||   |||||| ||||||||||||||||
Sbjct: 17071054 tgcttaccttcgaggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcg 17070995



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                            
Query: 243      gcatggggcatccggtctccatgatcgagctcggcaagctcttcgccgcccgtgggctgg 302
                ||||||| || | |||||||||||||||| |||||||| | ||||||||||| || || |
Sbjct: 17071264 gcatgggccacctggtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcg 17071205

                            
Query: 303      ccgtcacggtcg 314
                ||||||| ||||
Sbjct: 17071204 ccgtcaccgtcg 17071193



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 356      ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408
                |||||| |||| ||| ||||||||||||| |||||  | ||||||||||||||
Sbjct: 17071148 ttcctcaccggcgtcaccgcggccaacccggccatgacgttccaccgtctgcc 17071096



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>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete
              sequence
          Length = 157662

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 444    tgctgaccttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcg 503
              |||| |||||||||||| ||||||||||||||||   |||||| ||||||||||||||||
Sbjct: 101800 tgcttaccttcgaggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcg 101741



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                          
Query: 243    gcatggggcatccggtctccatgatcgagctcggcaagctcttcgccgcccgtgggctgg 302
              ||||||| || | |||||||||||||||| |||||||| | ||||||||||| || || |
Sbjct: 102010 gcatgggccacctggtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcg 101951

                          
Query: 303    ccgtcacggtcg 314
              ||||||| ||||
Sbjct: 101950 ccgtcaccgtcg 101939



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 356    ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408
              |||||| |||| ||| ||||||||||||| |||||  | ||||||||||||||
Sbjct: 101894 ttcctcaccggcgtcaccgcggccaacccggccatgacgttccaccgtctgcc 101842



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>gb|AY328909.1| Oryza sativa (japonica cultivar-group) BRITTLE CULM1 (BC1) gene,
           complete cds
          Length = 4498

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 444 tgctgaccttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcg 503
           |||| |||||||||||| ||||||||||||||||   |||||| ||||||||||||||||
Sbjct: 625 tgcttaccttcgaggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcg 566



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                       
Query: 243 gcatggggcatccggtctccatgatcgagctcggcaagctcttcgccgcccgtgggctgg 302
           ||||||| || | |||||||||||||||| |||||||| | ||||||||||| || || |
Sbjct: 835 gcatgggccacctggtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcg 776

                       
Query: 303 ccgtcacggtcg 314
           ||||||| ||||
Sbjct: 775 ccgtcaccgtcg 764



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 356 ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408
           |||||| |||| ||| ||||||||||||| |||||  | ||||||||||||||
Sbjct: 719 ttcctcaccggcgtcaccgcggccaacccggccatgacgttccaccgtctgcc 667



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 444      tgctgaccttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcg 503
                |||| |||||||||||| ||||||||||||||||   |||||| ||||||||||||||||
Sbjct: 17064623 tgcttaccttcgaggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcg 17064564



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                            
Query: 243      gcatggggcatccggtctccatgatcgagctcggcaagctcttcgccgcccgtgggctgg 302
                ||||||| || | |||||||||||||||| |||||||| | ||||||||||| || || |
Sbjct: 17064833 gcatgggccacctggtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcg 17064774

                            
Query: 303      ccgtcacggtcg 314
                ||||||| ||||
Sbjct: 17064773 ccgtcaccgtcg 17064762



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 356      ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408
                |||||| |||| ||| ||||||||||||| |||||  | ||||||||||||||
Sbjct: 17064717 ttcctcaccggcgtcaccgcggccaacccggccatgacgttccaccgtctgcc 17064665



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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 266     atcgagctcggcaagctcttc 286
               |||||||||||||||||||||
Sbjct: 3005543 atcgagctcggcaagctcttc 3005523



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>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S
              ribosomal protein S8 (Z214A02.25), and putative casein
              kinase I (Z214A02.27) genes, complete cds
          Length = 158797

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 356    ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408
              |||||| |||| ||||||  ||||||||   ||||||||||||||||| ||||
Sbjct: 152863 ttcctcaccggcgtctccttggccaacctgtccatctccttccaccgtatgcc 152915



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>ref|XM_493889.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1188

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 522  tgctggacttcttctgcagc 541
            ||||||||||||||||||||
Sbjct: 1117 tgctggacttcttctgcagc 1098



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>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
             complete sequence
          Length = 176678

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   tgctggacttcttctgcagc 541
             ||||||||||||||||||||
Sbjct: 63604 tgctggacttcttctgcagc 63623



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>ref|XM_415463.1| PREDICTED: Gallus gallus similar to Proto-oncogene tyrosine-protein
            kinase ABL1 (p150) (c-ABL) (LOC417181), mRNA
          Length = 4540

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 516  tcatcgtgctggacttcttc 535
            ||||||||||||||||||||
Sbjct: 2029 tcatcgtgctggacttcttc 2010



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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 262     catgatcgagctcggcaagc 281
               ||||||||||||||||||||
Sbjct: 1330551 catgatcgagctcggcaagc 1330532



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>gb|AC146193.3| Pan troglodytes BAC clone CH251-483N24 from Y, complete sequence
          Length = 232304

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   tggggcatccggtctccatg 265
             ||||||||||||||||||||
Sbjct: 15351 tggggcatccggtctccatg 15332



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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 264    tgatcgagctcggcaagctcttcg 287
              |||||||||||||| |||||||||
Sbjct: 865187 tgatcgagctcggccagctcttcg 865164



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 264    tgatcgagctcggcaagctcttcg 287
              |||||||||||||| |||||||||
Sbjct: 806682 tgatcgagctcggccagctcttcg 806659



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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 262     catgatcgagctcggcaagc 281
               ||||||||||||||||||||
Sbjct: 2647994 catgatcgagctcggcaagc 2647975



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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 267    tcgagctcggcaagctcttcgccgcccg 294
              |||| |||| ||||||||||||||||||
Sbjct: 179981 tcgacctcgacaagctcttcgccgcccg 179954



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>dbj|BS000596.1| Pan troglodytes chromosome Y clone:PTB-130H13, complete sequences
          Length = 182507

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   tggggcatccggtctccatg 265
             ||||||||||||||||||||
Sbjct: 73270 tggggcatccggtctccatg 73289



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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 246      tggggcatccggtctccatg 265
                ||||||||||||||||||||
Sbjct: 22667007 tggggcatccggtctccatg 22666988



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>dbj|AK138761.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430055A10 product:prolyl endopeptidase,
           full insert sequence
          Length = 1364

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 242 ggcatggggcatccggtctccatg 265
           |||||||||||||| |||||||||
Sbjct: 845 ggcatggggcatcctgtctccatg 868



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>dbj|AK163774.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130014H04 product:prolyl endopeptidase,
            full insert sequence
          Length = 2689

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 242  ggcatggggcatccggtctccatg 265
            |||||||||||||| |||||||||
Sbjct: 2062 ggcatggggcatcctgtctccatg 2085



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>gb|AC151479.4| Pan troglodytes BAC clone CH251-656P8 from chromosome y, complete
             sequence
          Length = 179557

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   tggggcatccggtctccatg 265
             ||||||||||||||||||||
Sbjct: 81074 tggggcatccggtctccatg 81055



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>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence
          Length = 151589

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 522    tgctggacttcttctgcagc 541
              ||||||||||||||||||||
Sbjct: 146003 tgctggacttcttctgcagc 146022



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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    catgatcgagctcggcaagc 281
              ||||||||||||||||||||
Sbjct: 112314 catgatcgagctcggcaagc 112333



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 522    tgctggacttcttctgcagc 541
              ||||||||||||||||||||
Sbjct: 546205 tgctggacttcttctgcagc 546224



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>gb|AY083680.1| Avena sativa clone OP9 receptor kinase gene cluster, complete
            sequence
          Length = 10607

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 191  aacaccaccatgggtgccaggaagccgc 218
            ||||||||||||| ||||||||||||||
Sbjct: 4975 aacaccaccatgg-tgccaggaagccgc 5001



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>dbj|AB022053.2| Mus musculus gene for prolyl oligopeptidase, complete cds
          Length = 42600

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   ggcatggggcatccggtctccatg 265
             |||||||||||||| |||||||||
Sbjct: 36550 ggcatggggcatcctgtctccatg 36573



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>gb|AC007284.4|AC007284 Homo sapiens BAC clone RP11-558K21 from Y, complete sequence
          Length = 171449

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    tggggcatccggtctccatg 265
              ||||||||||||||||||||
Sbjct: 142386 tggggcatccggtctccatg 142405



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>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 200061

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 242    ggcatggggcatccggtctccatg 265
              |||||||||||||| |||||||||
Sbjct: 120884 ggcatggggcatcctgtctccatg 120861



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>dbj|AK073169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020B11, full
            insert sequence
          Length = 2039

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 522  tgctggacttcttctgcagc 541
            ||||||||||||||||||||
Sbjct: 1669 tgctggacttcttctgcagc 1650



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>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds,
             stain:IL144
          Length = 58996

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 494   ctcgccggcgacgccccgggcgtc 517
             ||||||||||||||| ||||||||
Sbjct: 46965 ctcgccggcgacgcctcgggcgtc 46988


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,254,349
Number of Sequences: 3902068
Number of extensions: 3254349
Number of successful extensions: 206963
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 206323
Number of HSP's gapped (non-prelim): 641
length of query: 547
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 524
effective length of database: 17,143,297,704
effective search space: 8983087996896
effective search space used: 8983087996896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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