Clone Name | bart18b03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_463421.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1455 Score = 139 bits (70), Expect = 1e-29 Identities = 159/188 (84%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 224 gtgctctacccgtcgccgggcatggggcatccggtctccatgatcgagctcggcaagctc 283 |||||||||||||||||||||||||| || | ||||||||||||||||||||||||| | Sbjct: 46 gtgctctacccgtcgccgggcatgggccacctggtctccatgatcgagctcggcaaggtg 105 Query: 284 ttcgccgcccgtgggctggccgtcacggtcgccctcatggactcgccgcacg---acacc 340 ||||||||||| || || |||||||| |||| | || | ||| | ||| ||| ||||| Sbjct: 106 ttcgccgcccgcggcctcgccgtcaccgtcgtcgtcgtcgacccaccgtacggcaacacc 165 Query: 341 agcgccacgggccccttcctcgccggtgtctccgcggccaaccccgccatctccttccac 400 |||| ||||| || ||||||||||| ||| ||||||||||||| ||||| | |||||| Sbjct: 166 ggcgcgacggggcctttcctcgccggcgtcaccgcggccaacccggccatgacgttccac 225 Query: 401 cgtctgcc 408 |||||||| Sbjct: 226 cgtctgcc 233 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 449 accttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcgacgcc 508 |||||||||||| |||||||||||||||| |||||| |||||||||||||||| | || Sbjct: 280 accttcgaggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctcc 339 Query: 509 ccgggcgtcatcgtgctggacttcttctgcagcgccgcc 547 |||| |||| || | | ||||||||||||| ||||||| Sbjct: 340 ccggtcgtcctcatcatcgacttcttctgcaacgccgcc 378
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 139 bits (70), Expect = 1e-29 Identities = 159/188 (84%), Gaps = 3/188 (1%) Strand = Plus / Minus Query: 224 gtgctctacccgtcgccgggcatggggcatccggtctccatgatcgagctcggcaagctc 283 |||||||||||||||||||||||||| || | ||||||||||||||||||||||||| | Sbjct: 28842871 gtgctctacccgtcgccgggcatgggccacctggtctccatgatcgagctcggcaaggtg 28842812 Query: 284 ttcgccgcccgtgggctggccgtcacggtcgccctcatggactcgccgcacg---acacc 340 ||||||||||| || || |||||||| |||| | || | ||| | ||| ||| ||||| Sbjct: 28842811 ttcgccgcccgcggcctcgccgtcaccgtcgtcgtcgtcgacccaccgtacggcaacacc 28842752 Query: 341 agcgccacgggccccttcctcgccggtgtctccgcggccaaccccgccatctccttccac 400 |||| ||||| || ||||||||||| ||| ||||||||||||| ||||| | |||||| Sbjct: 28842751 ggcgcgacggggcctttcctcgccggcgtcaccgcggccaacccggccatgacgttccac 28842692 Query: 401 cgtctgcc 408 |||||||| Sbjct: 28842691 cgtctgcc 28842684 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 449 accttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcgacgcc 508 |||||||||||| |||||||||||||||| |||||| |||||||||||||||| | || Sbjct: 28842637 accttcgaggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctcc 28842578 Query: 509 ccgggcgtcatcgtgctggacttcttctgcagcgccgcc 547 |||| |||| || | | ||||||||||||| ||||||| Sbjct: 28842577 ccggtcgtcctcatcatcgacttcttctgcaacgccgcc 28842539
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 139 bits (70), Expect = 1e-29 Identities = 159/188 (84%), Gaps = 3/188 (1%) Strand = Plus / Minus Query: 224 gtgctctacccgtcgccgggcatggggcatccggtctccatgatcgagctcggcaagctc 283 |||||||||||||||||||||||||| || | ||||||||||||||||||||||||| | Sbjct: 60914 gtgctctacccgtcgccgggcatgggccacctggtctccatgatcgagctcggcaaggtg 60855 Query: 284 ttcgccgcccgtgggctggccgtcacggtcgccctcatggactcgccgcacg---acacc 340 ||||||||||| || || |||||||| |||| | || | ||| | ||| ||| ||||| Sbjct: 60854 ttcgccgcccgcggcctcgccgtcaccgtcgtcgtcgtcgacccaccgtacggcaacacc 60795 Query: 341 agcgccacgggccccttcctcgccggtgtctccgcggccaaccccgccatctccttccac 400 |||| ||||| || ||||||||||| ||| ||||||||||||| ||||| | |||||| Sbjct: 60794 ggcgcgacggggcctttcctcgccggcgtcaccgcggccaacccggccatgacgttccac 60735 Query: 401 cgtctgcc 408 |||||||| Sbjct: 60734 cgtctgcc 60727 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 449 accttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcgacgcc 508 |||||||||||| |||||||||||||||| |||||| |||||||||||||||| | || Sbjct: 60680 accttcgaggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctcc 60621 Query: 509 ccgggcgtcatcgtgctggacttcttctgcagcgccgcc 547 |||| |||| || | | ||||||||||||| ||||||| Sbjct: 60620 ccggtcgtcctcatcatcgacttcttctgcaacgccgcc 60582
>dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114N14, full insert sequence Length = 1727 Score = 139 bits (70), Expect = 1e-29 Identities = 159/188 (84%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 224 gtgctctacccgtcgccgggcatggggcatccggtctccatgatcgagctcggcaagctc 283 |||||||||||||||||||||||||| || | ||||||||||||||||||||||||| | Sbjct: 107 gtgctctacccgtcgccgggcatgggccacctggtctccatgatcgagctcggcaaggtg 166 Query: 284 ttcgccgcccgtgggctggccgtcacggtcgccctcatggactcgccgcacg---acacc 340 ||||||||||| || || |||||||| |||| | || | ||| | ||| ||| ||||| Sbjct: 167 ttcgccgcccgcggcctcgccgtcaccgtcgtcgtcgtcgacccaccgtacggcaacacc 226 Query: 341 agcgccacgggccccttcctcgccggtgtctccgcggccaaccccgccatctccttccac 400 |||| ||||| || ||||||||||| ||| ||||||||||||| ||||| | |||||| Sbjct: 227 ggcgcgacggggcctttcctcgccggcgtcaccgcggccaacccggccatgacgttccac 286 Query: 401 cgtctgcc 408 |||||||| Sbjct: 287 cgtctgcc 294 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 449 accttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcgacgcc 508 |||||||||||| |||||||||||||||| |||||| |||||||||||||||| | || Sbjct: 341 accttcgaggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctcc 400 Query: 509 ccgggcgtcatcgtgctggacttcttctgcagcgccgcc 547 |||| |||| || | | ||||||||||||| ||||||| Sbjct: 401 ccggtcgtcctcatcatcgacttcttctgcaacgccgcc 439
>ref|XM_468692.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 444 tgctgaccttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcg 503 |||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||| Sbjct: 317 tgcttaccttcgaggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcg 376 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 243 gcatggggcatccggtctccatgatcgagctcggcaagctcttcgccgcccgtgggctgg 302 ||||||| || | |||||||||||||||| |||||||| | ||||||||||| || || | Sbjct: 107 gcatgggccacctggtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcg 166 Query: 303 ccgtcacggtcg 314 ||||||| |||| Sbjct: 167 ccgtcaccgtcg 178 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 356 ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408 |||||| |||| ||| ||||||||||||| ||||| | |||||||||||||| Sbjct: 223 ttcctcaccggcgtcaccgcggccaacccggccatgacgttccaccgtctgcc 275
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 444 tgctgaccttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcg 503 |||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||| Sbjct: 17071054 tgcttaccttcgaggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcg 17070995 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 243 gcatggggcatccggtctccatgatcgagctcggcaagctcttcgccgcccgtgggctgg 302 ||||||| || | |||||||||||||||| |||||||| | ||||||||||| || || | Sbjct: 17071264 gcatgggccacctggtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcg 17071205 Query: 303 ccgtcacggtcg 314 ||||||| |||| Sbjct: 17071204 ccgtcaccgtcg 17071193 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 356 ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408 |||||| |||| ||| ||||||||||||| ||||| | |||||||||||||| Sbjct: 17071148 ttcctcaccggcgtcaccgcggccaacccggccatgacgttccaccgtctgcc 17071096
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete sequence Length = 157662 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 444 tgctgaccttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcg 503 |||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||| Sbjct: 101800 tgcttaccttcgaggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcg 101741 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 243 gcatggggcatccggtctccatgatcgagctcggcaagctcttcgccgcccgtgggctgg 302 ||||||| || | |||||||||||||||| |||||||| | ||||||||||| || || | Sbjct: 102010 gcatgggccacctggtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcg 101951 Query: 303 ccgtcacggtcg 314 ||||||| |||| Sbjct: 101950 ccgtcaccgtcg 101939 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 356 ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408 |||||| |||| ||| ||||||||||||| ||||| | |||||||||||||| Sbjct: 101894 ttcctcaccggcgtcaccgcggccaacccggccatgacgttccaccgtctgcc 101842
>gb|AY328909.1| Oryza sativa (japonica cultivar-group) BRITTLE CULM1 (BC1) gene, complete cds Length = 4498 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 444 tgctgaccttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcg 503 |||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||| Sbjct: 625 tgcttaccttcgaggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcg 566 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 243 gcatggggcatccggtctccatgatcgagctcggcaagctcttcgccgcccgtgggctgg 302 ||||||| || | |||||||||||||||| |||||||| | ||||||||||| || || | Sbjct: 835 gcatgggccacctggtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcg 776 Query: 303 ccgtcacggtcg 314 ||||||| |||| Sbjct: 775 ccgtcaccgtcg 764 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 356 ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408 |||||| |||| ||| ||||||||||||| ||||| | |||||||||||||| Sbjct: 719 ttcctcaccggcgtcaccgcggccaacccggccatgacgttccaccgtctgcc 667
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 444 tgctgaccttcgaggtcgcccgcctctccaacccgcacctccgtgacttcctcgccggcg 503 |||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||| Sbjct: 17064623 tgcttaccttcgaggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcg 17064564 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 243 gcatggggcatccggtctccatgatcgagctcggcaagctcttcgccgcccgtgggctgg 302 ||||||| || | |||||||||||||||| |||||||| | ||||||||||| || || | Sbjct: 17064833 gcatgggccacctggtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcg 17064774 Query: 303 ccgtcacggtcg 314 ||||||| |||| Sbjct: 17064773 ccgtcaccgtcg 17064762 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 356 ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408 |||||| |||| ||| ||||||||||||| ||||| | |||||||||||||| Sbjct: 17064717 ttcctcaccggcgtcaccgcggccaacccggccatgacgttccaccgtctgcc 17064665
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 atcgagctcggcaagctcttc 286 ||||||||||||||||||||| Sbjct: 3005543 atcgagctcggcaagctcttc 3005523
>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S ribosomal protein S8 (Z214A02.25), and putative casein kinase I (Z214A02.27) genes, complete cds Length = 158797 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 356 ttcctcgccggtgtctccgcggccaaccccgccatctccttccaccgtctgcc 408 |||||| |||| |||||| |||||||| ||||||||||||||||| |||| Sbjct: 152863 ttcctcaccggcgtctccttggccaacctgtccatctccttccaccgtatgcc 152915
>ref|XM_493889.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1188 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tgctggacttcttctgcagc 541 |||||||||||||||||||| Sbjct: 1117 tgctggacttcttctgcagc 1098
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tgctggacttcttctgcagc 541 |||||||||||||||||||| Sbjct: 63604 tgctggacttcttctgcagc 63623
>ref|XM_415463.1| PREDICTED: Gallus gallus similar to Proto-oncogene tyrosine-protein kinase ABL1 (p150) (c-ABL) (LOC417181), mRNA Length = 4540 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 tcatcgtgctggacttcttc 535 |||||||||||||||||||| Sbjct: 2029 tcatcgtgctggacttcttc 2010
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 catgatcgagctcggcaagc 281 |||||||||||||||||||| Sbjct: 1330551 catgatcgagctcggcaagc 1330532
>gb|AC146193.3| Pan troglodytes BAC clone CH251-483N24 from Y, complete sequence Length = 232304 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tggggcatccggtctccatg 265 |||||||||||||||||||| Sbjct: 15351 tggggcatccggtctccatg 15332
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 tgatcgagctcggcaagctcttcg 287 |||||||||||||| ||||||||| Sbjct: 865187 tgatcgagctcggccagctcttcg 865164
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 tgatcgagctcggcaagctcttcg 287 |||||||||||||| ||||||||| Sbjct: 806682 tgatcgagctcggccagctcttcg 806659
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 catgatcgagctcggcaagc 281 |||||||||||||||||||| Sbjct: 2647994 catgatcgagctcggcaagc 2647975
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 tcgagctcggcaagctcttcgccgcccg 294 |||| |||| |||||||||||||||||| Sbjct: 179981 tcgacctcgacaagctcttcgccgcccg 179954
>dbj|BS000596.1| Pan troglodytes chromosome Y clone:PTB-130H13, complete sequences Length = 182507 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 tggggcatccggtctccatg 265 |||||||||||||||||||| Sbjct: 73270 tggggcatccggtctccatg 73289
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tggggcatccggtctccatg 265 |||||||||||||||||||| Sbjct: 22667007 tggggcatccggtctccatg 22666988
>dbj|AK138761.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430055A10 product:prolyl endopeptidase, full insert sequence Length = 1364 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ggcatggggcatccggtctccatg 265 |||||||||||||| ||||||||| Sbjct: 845 ggcatggggcatcctgtctccatg 868
>dbj|AK163774.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130014H04 product:prolyl endopeptidase, full insert sequence Length = 2689 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ggcatggggcatccggtctccatg 265 |||||||||||||| ||||||||| Sbjct: 2062 ggcatggggcatcctgtctccatg 2085
>gb|AC151479.4| Pan troglodytes BAC clone CH251-656P8 from chromosome y, complete sequence Length = 179557 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tggggcatccggtctccatg 265 |||||||||||||||||||| Sbjct: 81074 tggggcatccggtctccatg 81055
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tgctggacttcttctgcagc 541 |||||||||||||||||||| Sbjct: 146003 tgctggacttcttctgcagc 146022
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 catgatcgagctcggcaagc 281 |||||||||||||||||||| Sbjct: 112314 catgatcgagctcggcaagc 112333
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tgctggacttcttctgcagc 541 |||||||||||||||||||| Sbjct: 546205 tgctggacttcttctgcagc 546224
>gb|AY083680.1| Avena sativa clone OP9 receptor kinase gene cluster, complete sequence Length = 10607 Score = 40.1 bits (20), Expect = 7.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 191 aacaccaccatgggtgccaggaagccgc 218 ||||||||||||| |||||||||||||| Sbjct: 4975 aacaccaccatgg-tgccaggaagccgc 5001
>dbj|AB022053.2| Mus musculus gene for prolyl oligopeptidase, complete cds Length = 42600 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ggcatggggcatccggtctccatg 265 |||||||||||||| ||||||||| Sbjct: 36550 ggcatggggcatcctgtctccatg 36573
>gb|AC007284.4|AC007284 Homo sapiens BAC clone RP11-558K21 from Y, complete sequence Length = 171449 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 tggggcatccggtctccatg 265 |||||||||||||||||||| Sbjct: 142386 tggggcatccggtctccatg 142405
>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200061 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 ggcatggggcatccggtctccatg 265 |||||||||||||| ||||||||| Sbjct: 120884 ggcatggggcatcctgtctccatg 120861
>dbj|AK073169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020B11, full insert sequence Length = 2039 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tgctggacttcttctgcagc 541 |||||||||||||||||||| Sbjct: 1669 tgctggacttcttctgcagc 1650
>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds, stain:IL144 Length = 58996 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 ctcgccggcgacgccccgggcgtc 517 ||||||||||||||| |||||||| Sbjct: 46965 ctcgccggcgacgcctcgggcgtc 46988 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,254,349 Number of Sequences: 3902068 Number of extensions: 3254349 Number of successful extensions: 206963 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 206323 Number of HSP's gapped (non-prelim): 641 length of query: 547 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 524 effective length of database: 17,143,297,704 effective search space: 8983087996896 effective search space used: 8983087996896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)