ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart18a10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC145804.2| Xenopus tropicalis clone CH216-83M4, complete sequence Length = 135836 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 472 gcagccgccgctcctgccgctgccgcagca 501 |||||||||||| ||||||||||||||||| Sbjct: 84890 gcagccgccgctgctgccgctgccgcagca 84919
>ref|XM_843905.1| PREDICTED: Canis familiaris similar to transmembrane protein 52 (LOC607284), mRNA Length = 958 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 476 ccgccgctcctgccgctgccgcag 499 |||||||||||||||||||||||| Sbjct: 43 ccgccgctcctgccgctgccgcag 66
>emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on chromosome 6, complete sequence Length = 113362 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 223 ccattttctttctacatacattct 246 |||||||||||||||||||||||| Sbjct: 62194 ccattttctttctacatacattct 62217
>ref|XM_878619.1| PREDICTED: Bos taurus hypothetical protein LOC614875 (LOC614875), mRNA Length = 855 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 463 gccgttcccgcagccgccgctcctgccgctgccgc 497 |||| ||| |||||||||||||| ||||||||||| Sbjct: 765 gccgctcctgcagccgccgctccagccgctgccgc 799
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 470 ccgcagccgccgctcctgccgctgccg 496 |||||||| |||||||||||||||||| Sbjct: 20923646 ccgcagcctccgctcctgccgctgccg 20923672
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 470 ccgcagccgccgctcctgccgctgccg 496 |||||||| |||||||||||||||||| Sbjct: 15735 ccgcagcctccgctcctgccgctgccg 15761
>ref|XM_369863.1| Magnaporthe grisea 70-15 hypothetical protein (MG06378.4) partial mRNA Length = 534 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccg 496 |||||||||||||||||||||| Sbjct: 262 gccgccgctcctgccgctgccg 283
>ref|NM_178545.2| Homo sapiens transmembrane protein 52 (TMEM52), mRNA Length = 971 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 478 gccgctcctgccgctgccgcag 499 |||||||||||||||||||||| Sbjct: 113 gccgctcctgccgctgccgcag 134
>emb|CR956378.3| Pig DNA sequence from clone CH242-51F17 on chromosome 17, complete sequence Length = 103244 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 cttcttcccttccttcctcacc 64 |||||||||||||||||||||| Sbjct: 93446 cttcttcccttccttcctcacc 93425
>emb|AL109917.22|HSDJ140A9 Human DNA sequence from clone RP1-140A9 on chromosome 1p36.2-36.33 Contains the 5' end of the GNB1 gene for guanine nucleotide binding protein (G protein) beta polypeptide 1, a novel gene, the gene for calmodulin-like protein (LOC163688), a novel gene (LOC339456), a novel gene (LOC348524), a novel gene (LOC339458, FLJ37323) , a novel gene ( LOC339459) similar to KIAA1751 and three CpG islands, complete sequence Length = 165191 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgcag 499 |||||||||||||||||||||| Sbjct: 122379 gccgctcctgccgctgccgcag 122358
>emb|CR378669.1| Photobacterium profundum SS9; segment 7/12 Length = 349285 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 agctttcagccttcattcgaaataat 336 |||||| ||||||||||||||||||| Sbjct: 190078 agcttttagccttcattcgaaataat 190053
>emb|AL031227.1|DMC66A1 Drosophila melanogaster cosmid 66A1 Length = 34127 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 475 gccgccgctcctgccgctgccgcagc 500 ||||||||| |||||||||||||||| Sbjct: 14050 gccgccgctgctgccgctgccgcagc 14025
>gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167097 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 475 gccgccgctcctgccgctgccgcagc 500 ||||||||| |||||||||||||||| Sbjct: 39563 gccgccgctgctgccgctgccgcagc 39538
>ref|NM_057326.4| Drosophila melanogaster pebbled CG12212-RA, transcript variant A (peb), mRNA Length = 6458 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccgcagc 500 ||||||||| |||||||||||||||| Sbjct: 3844 gccgccgctgctgccgctgccgcagc 3869
>ref|NM_001014722.1| Drosophila melanogaster pebbled CG12212-RB, transcript variant B (peb), mRNA Length = 6453 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccgcagc 500 ||||||||| |||||||||||||||| Sbjct: 3839 gccgccgctgctgccgctgccgcagc 3864
>gb|AY058335.1| Drosophila melanogaster GH10905 full length cDNA Length = 6318 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccgcagc 500 ||||||||| |||||||||||||||| Sbjct: 3808 gccgccgctgctgccgctgccgcagc 3833
>emb|AJ278736.1|HSA278736 Homo sapiens mRNA for hypothetical protein (ORF1), 971BP Length = 971 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 478 gccgctcctgccgctgccgcag 499 |||||||||||||||||||||| Sbjct: 113 gccgctcctgccgctgccgcag 134
>gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 of 74 of the complete sequence Length = 310993 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccgcagc 500 ||||||||| |||||||||||||||| Sbjct: 234136 gccgccgctgctgccgctgccgcagc 234161
>gb|U86010.1|DMU86010 Drosophila zinc-finger nuclear protein hindsight, complete cds Length = 6188 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccgcagc 500 ||||||||| |||||||||||||||| Sbjct: 3566 gccgccgctgctgccgctgccgcagc 3591
>ref|XM_513109.1| PREDICTED: Pan troglodytes similar to KIAA0445 protein (LOC456523), mRNA Length = 5789 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 ctcctgccgctgccgcagcac 502 ||||||||||||||||||||| Sbjct: 5277 ctcctgccgctgccgcagcac 5257
>gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete sequence Length = 151609 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 475 gccgccgctcctgccgctgccgcagcact 503 ||||||||| ||||||| ||||||||||| Sbjct: 73643 gccgccgctgctgccgccgccgcagcact 73615
>gb|AC018483.11| Drosophila melanogaster clone BACR11B22, complete sequence Length = 176595 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 tcccttccttcctcaccagct 68 ||||||||||||||||||||| Sbjct: 95053 tcccttccttcctcaccagct 95033 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 tcccttccttcctcaccagct 68 ||||||||||||||||||||| Sbjct: 6347 tcccttccttcctcaccagct 6327
>gb|AC150550.1| Drosophila melanogaster clone BACR21G13, complete sequence Length = 173358 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tcccttccttcctcaccagct 68 ||||||||||||||||||||| Sbjct: 42419 tcccttccttcctcaccagct 42439
>gb|BC075636.1| Mus musculus loop tail associated protein, mRNA (cDNA clone IMAGE:30545600), partial cds Length = 4779 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 466 gttcccgcagccgccgctcctgccgctgc 494 ||||||||||||||||| ||| ||||||| Sbjct: 745 gttcccgcagccgccgcccctcccgctgc 717
>ref|NM_198681.1| Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 2, mRNA Length = 4498 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 2333 gccgctcctgccgctgccgca 2313
>ref|NM_020631.2| Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 1, mRNA Length = 3922 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1757 gccgctcctgccgctgccgca 1737
>gb|AY499658.1| Rattus norvegicus neuronal RhoA GEF protein (Tech) mRNA, complete cds Length = 3997 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1987 gccgctcctgccgctgccgca 1967
>gb|AC134842.3| Mus musculus BAC clone RP24-375P18 from chromosome 14, complete sequence Length = 154676 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cttcttcccttccttcctcac 63 ||||||||||||||||||||| Sbjct: 110877 cttcttcccttccttcctcac 110897
>gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome 2, complete sequence Length = 212563 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 cttctccattttctttctaca 238 ||||||||||||||||||||| Sbjct: 179413 cttctccattttctttctaca 179393
>ref|XM_536728.2| PREDICTED: Canis familiaris similar to neuronal RhoA GEF protein (LOC479590), mRNA Length = 3312 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1882 gccgctcctgccgctgccgca 1862
>ref|NM_201272.1| Rattus norvegicus pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (Plekhg5), mRNA Length = 3997 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1987 gccgctcctgccgctgccgca 1967
>ref|NM_001004156.1| Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (Plekhg5), mRNA Length = 4128 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1885 gccgctcctgccgctgccgca 1865
>gb|AY605058.1| Mus musculus RhoA-specific guanine exchange factor SYX2 mRNA, complete cds Length = 4128 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1885 gccgctcctgccgctgccgca 1865
>gb|AY605057.1| Mus musculus RhoA-specific guanine exchange factor SYX1 mRNA, complete cds Length = 3867 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1885 gccgctcctgccgctgccgca 1865
>ref|XM_504029.1| Yarrowia lipolytica CLIB122, YALI0E16599g predicted mRNA Length = 1176 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cctctaccacgacaccattat 42 ||||||||||||||||||||| Sbjct: 210 cctctaccacgacaccattat 230
>emb|AL158217.25| Human DNA sequence from clone RP4-650H14 on chromosome 1p36.23-36.33 Contains the 3' end of the ESPN gene for espin, the TNFRSF25 gene for tumor necrosis factor receptor superfamily member 25, the gene for a novel PH domain-containing protein and four CpG islands, complete sequence Length = 53983 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 19753 gccgctcctgccgctgccgca 19773
>gb|AF527734.1| Homo sapiens medulloblastoma antigen MU-MB-2.42 mRNA, partial cds Length = 1852 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 ctcctgccgctgccgcagcac 502 ||||||||||||||||||||| Sbjct: 761 ctcctgccgctgccgcagcac 741
>emb|AL109825.23|HSJ148H17 Human DNA sequence from clone RP1-148H17 on chromosome 20 Contains a novel gene, complete sequence Length = 83840 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cttcttcccttccttcctcac 63 ||||||||||||||||||||| Sbjct: 63986 cttcttcccttccttcctcac 63966
>emb|AL049569.13|HSDJ37C10 Human DNA sequence from clone RP1-37C10 on chromosome 1p35.2-35.21 Contains the 3' end of the CROCC gene for ciliary rootlet coiled-coil rootletin (KIAA0445), the MFAP2 gene for microfibrillar-associated protein 2, a novel gene, the gene for a novel protein, the SDHB gene for succinate dehydrogenase complex subunit B iron sulfur (Ip), the PADI2 gene for type II peptidyl arginine deiminase, complete sequence Length = 216497 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 482 ctcctgccgctgccgcagcac 502 ||||||||||||||||||||| Sbjct: 187214 ctcctgccgctgccgcagcac 187234
>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence Length = 214509 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 466 gttcccgcagccgccgctcctgccgctgc 494 ||||||||||||||||| ||| ||||||| Sbjct: 108215 gttcccgcagccgccgcccctcccgctgc 108243
>dbj|AB097001.1| Homo sapiens mRNA for putative NFkB activating protein, complete cds, clone: 015N Length = 3450 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1604 gccgctcctgccgctgccgca 1584
>gb|AY118546.1| Drosophila melanogaster LD29902 full insert cDNA Length = 3289 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 475 gccgccgctcctgccgctgccgcagcact 503 ||||||||| ||||||| ||||||||||| Sbjct: 1263 gccgccgctgctgccgccgccgcagcact 1235
>dbj|AK125550.1| Homo sapiens cDNA FLJ43562 fis, clone PUAEN2005930 Length = 3696 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1841 gccgctcctgccgctgccgca 1821
>dbj|AK091201.1| Homo sapiens cDNA FLJ33882 fis, clone CTONG2007175 Length = 2660 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 808 gccgctcctgccgctgccgca 788
>dbj|AK096347.1| Homo sapiens cDNA FLJ39028 fis, clone NT2RP7006395 Length = 4211 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 2335 gccgctcctgccgctgccgca 2315
>tpg|BK003643.1| TPA: TPA_inf: Drosophila melanogaster HDC04646 (HDC04646) gene, complete cds Length = 216 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tcccttccttcctcaccagct 68 ||||||||||||||||||||| Sbjct: 27 tcccttccttcctcaccagct 47
>ref|NM_169790.1| Drosophila melanogaster PP2A-B' CG7913-RA, transcript variant A (PP2A-B'), mRNA Length = 3269 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 475 gccgccgctcctgccgctgccgcagcact 503 ||||||||| ||||||| ||||||||||| Sbjct: 1263 gccgccgctgctgccgccgccgcagcact 1235
>ref|NM_169789.1| Drosophila melanogaster PP2A-B' CG7913-RB, transcript variant B (PP2A-B'), mRNA Length = 3220 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 475 gccgccgctcctgccgctgccgcagcact 503 ||||||||| ||||||| ||||||||||| Sbjct: 1263 gccgccgctgctgccgccgccgcagcact 1235
>dbj|AK138147.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230012O19 product:similar to Putative NFkB activating protein [Homo sapiens], full insert sequence Length = 2795 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 833 gccgctcctgccgctgccgca 813
>dbj|AK154912.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630111D13 product:similar to Putative NFkB activating protein [Homo sapiens], full insert sequence Length = 3804 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1843 gccgctcctgccgctgccgca 1823
>gb|AC008256.5| Drosophila melanogaster, chromosome 2R, region 41C-41E, BAC clone BACR11B14, complete sequence Length = 174999 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tcccttccttcctcaccagct 68 ||||||||||||||||||||| Sbjct: 27951 tcccttccttcctcaccagct 27971
>gb|BC058060.1| Danio rerio zgc:112167, mRNA (cDNA clone IMAGE:5915834) Length = 2862 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 tcccgcagccgccgctcctgc 488 ||||||||||||||||||||| Sbjct: 824 tcccgcagccgccgctcctgc 804
>gb|BC023181.1| Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 5, mRNA (cDNA clone IMAGE:4951047), partial cds Length = 2001 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 31 gccgctcctgccgctgccgca 11
>gb|AC008686.8| Homo sapiens chromosome 19 clone CTB-5E10, complete sequence Length = 150192 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cttcttcccttccttcctcac 63 ||||||||||||||||||||| Sbjct: 10837 cttcttcccttccttcctcac 10817
>gb|BC042606.1| Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, mRNA (cDNA clone MGC:25206 IMAGE:4750645), complete cds Length = 3784 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1897 gccgctcctgccgctgccgca 1877
>gb|BC036671.2| Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, mRNA (cDNA clone IMAGE:4811640) Length = 3566 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 2388 gccgctcctgccgctgccgca 2368
>gb|BC015231.1| Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, mRNA (cDNA clone MGC:17838 IMAGE:3900065), complete cds Length = 3486 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1819 gccgctcctgccgctgccgca 1799
>tpg|BK005505.1| TPA: TPA_exp: Homo sapiens rootletin mRNA, complete cds Length = 6642 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 ctcctgccgctgccgcagcac 502 ||||||||||||||||||||| Sbjct: 5541 ctcctgccgctgccgcagcac 5521
>gb|AC016717.8| Homo sapiens BAC clone RP11-314B1 from 2, complete sequence Length = 210558 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cttcttcccttccttcctcac 63 ||||||||||||||||||||| Sbjct: 101726 cttcttcccttccttcctcac 101746
>dbj|AB018263.2| Homo sapiens mRNA for KIAA0720 protein, partial cds Length = 4749 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1863 gccgctcctgccgctgccgca 1843
>ref|XM_222896.3| PREDICTED: Rattus norvegicus loop tail associated protein (predicted) (Ltap_predicted), mRNA Length = 4792 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 466 gttcccgcagccgccgctcctgccgctgc 494 ||||||||||||||||| ||| ||||||| Sbjct: 756 gttcccgcagccgccgcccctcccgctgc 728
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 tcccgcagccgccgctcctgc 488 ||||||||||||||||||||| Sbjct: 4389886 tcccgcagccgccgctcctgc 4389906
>gb|AC011231.7| Homo sapiens BAC clone RP11-13K3 from 2, complete sequence Length = 119205 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 ctgcatctctccacctgtttt 265 ||||||||||||||||||||| Sbjct: 95167 ctgcatctctccacctgtttt 95187
>dbj|AB007914.2| Homo sapiens mRNA for KIAA0445 protein, partial cds Length = 6281 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 ctcctgccgctgccgcagcac 502 ||||||||||||||||||||| Sbjct: 5180 ctcctgccgctgccgcagcac 5160
>dbj|AK129198.1| Mus musculus mRNA for mKIAA0720 protein Length = 2050 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 93 gccgctcctgccgctgccgca 73
>dbj|AK024676.1| Homo sapiens cDNA: FLJ21023 fis, clone CAE06432 Length = 3625 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 1757 gccgctcctgccgctgccgca 1737
>dbj|AK131074.1| Homo sapiens mRNA for FLJ00260 protein Length = 4967 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 2082 gccgctcctgccgctgccgca 2062
>gb|U95739.1|HSU95739 Human chromosome 16p11.2-p12 BAC clone CIT987SK-224D6 complete sequence Length = 69015 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 cttcttcccttccttcctcac 63 ||||||||||||||||||||| Sbjct: 50908 cttcttcccttccttcctcac 50888
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete sequence Length = 224889 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 475 gccgccgctcctgccgctgccgcagcact 503 ||||||||| ||||||| ||||||||||| Sbjct: 14067 gccgccgctgctgccgccgccgcagcact 14039
>gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 of 73 of the complete sequence Length = 585533 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tcccttccttcctcaccagct 68 ||||||||||||||||||||| Sbjct: 538769 tcccttccttcctcaccagct 538789 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tcccttccttcctcaccagct 68 ||||||||||||||||||||| Sbjct: 450063 tcccttccttcctcaccagct 450083
>gb|AC074310.29| Mus musculus strain C57BL/6J chromosome 1 clone rp23-137i20, complete sequence Length = 222328 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 466 gttcccgcagccgccgctcctgccgctgc 494 ||||||||||||||||| ||| ||||||| Sbjct: 200020 gttcccgcagccgccgcccctcccgctgc 199992
>gb|AC153843.6| Mus musculus 10 BAC RP23-273P15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202968 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 ccattatcttcttcccttcct 56 ||||||||||||||||||||| Sbjct: 86283 ccattatcttcttcccttcct 86263
>emb|AL772240.7| Mouse DNA sequence from clone RP23-284C20 on chromosome 4, complete sequence Length = 93232 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 115 gccgctcctgccgctgccgca 95
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cctctaccacgacaccattat 42 ||||||||||||||||||||| Sbjct: 1967552 cctctaccacgacaccattat 1967572
>ref|NM_014675.2| Homo sapiens ciliary rootlet coiled-coil, rootletin (CROCC), mRNA Length = 6642 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 ctcctgccgctgccgcagcac 502 ||||||||||||||||||||| Sbjct: 5541 ctcctgccgctgccgcagcac 5521
>gb|U75433.1|YLU75433 Yarrowia lipolytica peroxin Pex16p (PEX16) gene, complete cds Length = 2161 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cctctaccacgacaccattat 42 ||||||||||||||||||||| Sbjct: 759 cctctaccacgacaccattat 779
>gb|DQ139275.1| Homo sapiens Tax1-binding protein 2 mRNA, complete cds, alternatively spliced Length = 5920 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 ctcctgccgctgccgcagcac 502 ||||||||||||||||||||| Sbjct: 4898 ctcctgccgctgccgcagcac 4878
>emb|AL611927.21| Mouse DNA sequence from clone RP23-445E20 on chromosome 4, complete sequence Length = 111802 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgca 498 ||||||||||||||||||||| Sbjct: 109917 gccgctcctgccgctgccgca 109897
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete sequence Length = 193057 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 aagcttctccattttctttct 235 ||||||||||||||||||||| Sbjct: 118052 aagcttctccattttctttct 118032
>emb|AL929065.4| Mouse DNA sequence from clone RP23-270H4 on chromosome 2, complete sequence Length = 173846 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 cttctccattttctttctaca 238 ||||||||||||||||||||| Sbjct: 118319 cttctccattttctttctaca 118339
>dbj|D13310.1|RABEPD Rabbit mRNA for endopeptidase, complete cds Length = 3507 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 cgccgctcctgccgctgccgc 497 ||||||||||||||||||||| Sbjct: 119 cgccgctcctgccgctgccgc 139
>gb|DQ214332.1| Taeniopygia guttata clone 0058P0016F05 DNA directed RNA polymerase II polypeptide C-like mRNA, complete sequence Length = 1328 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgctgccgcagc 500 ||||||||||| ||||||||| || ||||||| Sbjct: 602 cccgcagccgcagctcctgccccttccgcagc 571
>gb|DQ214000.1| Taeniopygia guttata clone 0064P0015B05 transcription factor IIIA variant 1-like mRNA, complete sequence Length = 653 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 470 ccgcagccgccgctcctgccgctgccgc 497 |||| ||||||||| ||||||||||||| Sbjct: 71 ccgccgccgccgctgctgccgctgccgc 44
>ref|XM_516294.1| PREDICTED: Pan troglodytes similar to brefeldin resistant Arf-GEF 2b isoform (LOC460188), mRNA Length = 7134 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 2083 cccgcagccgctgctcctgccgct 2060
>gb|AC159404.1| Trypanosoma brucei chromosome 8 clone RPCI93-10K10, complete sequence Length = 182660 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ttcttcccttccttcctcac 63 |||||||||||||||||||| Sbjct: 135589 ttcttcccttccttcctcac 135570
>ref|XM_469491.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1398 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccgcagcac 502 |||| |||||||||||| |||||||||| Sbjct: 139 gccgacgctcctgccgccgccgcagcac 166
>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01 map R1538, complete sequence Length = 142712 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 475 gccgccgctcctgccgctgccgcagcac 502 |||| |||||||||||| |||||||||| Sbjct: 119162 gccgacgctcctgccgccgccgcagcac 119135
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ttcttcccttccttcctcac 63 |||||||||||||||||||| Sbjct: 2022596 ttcttcccttccttcctcac 2022615
>gb|AC151843.3| Mus musculus BAC clone RP23-88K14 from chromosome 10, complete sequence Length = 268516 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 cattatcttcttcccttccttcct 60 |||||||||||||| ||||||||| Sbjct: 54031 cattatcttcttcctttccttcct 54008
>gb|BC010267.1| Homo sapiens IQ motif and Sec7 domain 1, mRNA (cDNA clone MGC:5112 IMAGE:2900367), complete cds Length = 3782 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 1121 cccgcagccgctgctcctgccgct 1098
>ref|XM_867191.1| PREDICTED: Bos taurus similar to transmembrane protein 28 (LOC615395), mRNA Length = 1096 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 470 ccgcagccgccgctcctgccgctgccgc 497 |||| ||||| ||||||||||||||||| Sbjct: 394 ccgctgccgctgctcctgccgctgccgc 367
>gb|AY653734.1| Homo sapiens brefeldin resistant Arf-GEF 2b isoform mRNA, complete cds, alternatively spliced Length = 4414 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 1129 cccgcagccgctgctcctgccgct 1106
>ref|XM_866512.1| PREDICTED: Bos taurus similar to CG8580-PA, isoform A, transcript variant 1 (LOC614292), mRNA Length = 2125 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gctcctgccgctgccgcagc 500 |||||||||||||||||||| Sbjct: 58 gctcctgccgctgccgcagc 77
>ref|XM_878553.1| PREDICTED: Bos taurus similar to CG8580-PA, isoform A, transcript variant 3 (LOC614292), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gctcctgccgctgccgcagc 500 |||||||||||||||||||| Sbjct: 58 gctcctgccgctgccgcagc 77
>ref|XM_878516.1| PREDICTED: Bos taurus similar to CG8580-PA, isoform A, transcript variant 2 (LOC614292), mRNA Length = 1878 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gctcctgccgctgccgcagc 500 |||||||||||||||||||| Sbjct: 58 gctcctgccgctgccgcagc 77
>gb|AC131669.3| Mus musculus BAC clone RP23-307E9 from chromosome 7, complete sequence Length = 189956 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 171837 tcttcttcccttccttcctc 171818
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 ccgctcctgccgctgccgcagcac 502 |||| ||||||||||||||||||| Sbjct: 193920 ccgcccctgccgctgccgcagcac 193943
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 aaccaagcttctccattttc 230 |||||||||||||||||||| Sbjct: 5124081 aaccaagcttctccattttc 5124100
>gb|AC125274.12| Mus musculus chromosome 15, clone RP24-157F9, complete sequence Length = 188060 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 122659 tcttcttcccttccttcctc 122678
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccgcagcac 502 |||| |||||||||||| |||||||||| Sbjct: 28293880 gccgacgctcctgccgccgccgcagcac 28293907
>gb|AF016687.1| Caenorhabditis elegans cosmid T21D12, complete sequence Length = 35092 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 34 caccattatcttcttcccttccttcctc 61 |||||| ||||||||||||| ||||||| Sbjct: 30675 caccatcatcttcttccctttcttcctc 30648
>gb|AC108401.19| Mus musculus chromosome 12, clone RP24-98A23, complete sequence Length = 213381 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 51871 tcttcttcccttccttcctc 51890
>gb|AC131717.3| Mus musculus chromosome 12 clone RP23-167A18, complete sequence Length = 190372 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ttcattccatttgttttcta 298 |||||||||||||||||||| Sbjct: 12375 ttcattccatttgttttcta 12394
>ref|XM_842618.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0688) partial mRNA Length = 9027 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 479 ccgctcctgccgctgccgcagcac 502 |||| ||||||||||||||||||| Sbjct: 4100 ccgcccctgccgctgccgcagcac 4077
>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence Length = 234881 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 gccgccgctcctgccgctgccgca 498 ||||||||| |||||||||||||| Sbjct: 232552 gccgccgctgctgccgctgccgca 232529 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccgca 498 ||||||||| |||||||||||||| Sbjct: 32735 gccgccgctgctgccgctgccgca 32758
>gb|AC141900.3| Mus musculus BAC clone RP23-47I1 from chromosome 12, complete sequence Length = 145868 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 ttcattccatttgttttcta 298 |||||||||||||||||||| Sbjct: 43177 ttcattccatttgttttcta 43158
>emb|X62144.1|TCP0C T.cruzi mRNA for P0 ribosomal protein Length = 334 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 gccgctcctgccgctgccgc 497 |||||||||||||||||||| Sbjct: 163 gccgctcctgccgctgccgc 182
>ref|XM_816024.1| Trypanosoma cruzi strain CL Brener 60S acidic ribosomal protein P0 (Tc00.1047053508355.250) partial mRNA Length = 972 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 gccgctcctgccgctgccgc 497 |||||||||||||||||||| Sbjct: 898 gccgctcctgccgctgccgc 917
>ref|XM_816025.1| Trypanosoma cruzi strain CL Brener 60S acidic ribosomal protein P0 (Tc00.1047053508355.260) partial mRNA Length = 972 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 gccgctcctgccgctgccgc 497 |||||||||||||||||||| Sbjct: 898 gccgctcctgccgctgccgc 917
>gb|AC124573.4| Mus musculus BAC clone RP23-159F13 from 10, complete sequence Length = 191206 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 cattatcttcttcccttccttcct 60 |||||||||||||| ||||||||| Sbjct: 109485 cattatcttcttcctttccttcct 109462
>gb|BT001713.1| Drosophila melanogaster RE67722 full insert cDNA Length = 3336 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 472 gcagccgccgctcctgccgctgccgcagcact 503 ||||||||||| ||||||||||||| ||||| Sbjct: 1869 gcagccgccgccgctgccgctgccgctgcact 1838
>emb|Z84485.1|HS524E15 Human DNA sequence from clone RP3-524E15 on chromosome 6p21 Contains the BRPF3 gene for bromodomain and PHD finger containing protein 3 and a CpG Island, complete sequence Length = 80908 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 agccgccgctcctgccgctgccgc 497 |||||||||| ||||||||||||| Sbjct: 49674 agccgccgctgctgccgctgccgc 49697
>emb|AL391495.16| Human DNA sequence from clone RP11-324B6 on chromosome Xq13.2-21.1 Contains a tetratricopeptide repeat domain 3 (TTC3) pseudogene and the gene for hepatocellular carcinoma-associated protein (HCA3), complete sequence Length = 142952 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 470 ccgcagccgccgctcctgccgctgccgc 497 |||| ||||||||| ||||||||||||| Sbjct: 34696 ccgccgccgccgctgctgccgctgccgc 34723
>emb|AL023798.1|HS220J16 Human DNA sequence from clone RP6-220J16 on chromosome Xq26.1-27.3, complete sequence Length = 108086 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ttctagctgctgtgcatctc 175 |||||||||||||||||||| Sbjct: 98214 ttctagctgctgtgcatctc 98233
>emb|AL591064.11| Mouse DNA sequence from clone RP23-395E18 on chromosome 2, complete sequence Length = 200078 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 9697 tcttcttcccttccttcctc 9678
>emb|CR388169.7| Zebrafish DNA sequence from clone DKEYP-61H1 in linkage group 3, complete sequence Length = 89582 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tcgatctgtgttggtcgatc 193 |||||||||||||||||||| Sbjct: 76548 tcgatctgtgttggtcgatc 76567
>gb|AC151838.6| Mus musculus BAC clone RP23-226C6 from chromosome 7, complete sequence Length = 222398 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 183402 tcttcttcccttccttcctc 183421
>gb|AY115567.1| Drosophila melanogaster elbow (elB) mRNA, complete cds Length = 2484 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 472 gcagccgccgctcctgccgctgccgcagcact 503 ||||||||||| ||||||||||||| ||||| Sbjct: 1043 gcagccgccgccgctgccgctgccgctgcact 1012
>gb|AC010031.8| Drosophila melanogaster 3L BAC RP98-2M20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173509 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 470 ccgcagccgccgctcctgccgctgccgc 497 |||| ||||||||| ||||||||||||| Sbjct: 112668 ccgccgccgccgctgctgccgctgccgc 112641
>emb|CR609029.1| full-length cDNA clone CS0DL005YP20 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1151 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 gccgctcctgccgctgccgcagca 501 |||||| ||||||||||||||||| Sbjct: 159 gccgctgctgccgctgccgcagca 136
>ref|NM_205990.1| Drosophila melanogaster elbow B CG4220-RC, transcript variant C (elB), mRNA Length = 3324 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 472 gcagccgccgctcctgccgctgccgcagcact 503 ||||||||||| ||||||||||||| ||||| Sbjct: 1869 gcagccgccgccgctgccgctgccgctgcact 1838
>gb|AC060226.39| Homo sapiens 12 BAC RP11-101P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132604 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 470 ccgcagccgccgctcctgccgctgccgc 497 |||| ||||||||| ||||||||||||| Sbjct: 63010 ccgccgccgccgctgctgccgctgccgc 63037
>ref|NM_176045.1| Drosophila melanogaster elbow B CG4220-RB, transcript variant B (elB), mRNA Length = 2457 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 472 gcagccgccgctcctgccgctgccgcagcact 503 ||||||||||| ||||||||||||| ||||| Sbjct: 1076 gcagccgccgccgctgccgctgccgctgcact 1045
>ref|NM_140410.1| Drosophila melanogaster CG8760-RA (CG8760), mRNA Length = 1338 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 470 ccgcagccgccgctcctgccgctgccgc 497 |||| ||||||||| ||||||||||||| Sbjct: 145 ccgccgccgccgctgctgccgctgccgc 118
>ref|NM_078842.4| Drosophila melanogaster elbow B CG4220-RA, transcript variant A (elB), mRNA Length = 2577 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 472 gcagccgccgctcctgccgctgccgcagcact 503 ||||||||||| ||||||||||||| ||||| Sbjct: 1076 gcagccgccgccgctgccgctgccgctgcact 1045
>ref|NM_014869.3| Homo sapiens IQ motif and Sec7 domain 1 (IQSEC1), mRNA Length = 4414 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 1129 cccgcagccgctgctcctgccgct 1106
>gb|BC104619.1| Bos taurus cDNA clone IMAGE:8120505 Length = 1994 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gctcctgccgctgccgcagc 500 |||||||||||||||||||| Sbjct: 59 gctcctgccgctgccgcagc 78
>gb|AC182809.1| Gasterosteus aculeatus clone VMRC28-105K14, complete sequence Length = 134684 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ttccttcctcaccagctctc 71 |||||||||||||||||||| Sbjct: 28726 ttccttcctcaccagctctc 28707
>gb|AC008426.4| Homo sapiens chromosome 5 clone CTC-307A7, complete sequence Length = 150870 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 54712 tcttcttcccttccttcctc 54731
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 cgcagccgccgctcctgccgctgc 494 |||||||||||||||| ||||||| Sbjct: 602492 cgcagccgccgctcctcccgctgc 602515
>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR37K07, complete sequence Length = 157722 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 472 gcagccgccgctcctgccgctgccgcagcact 503 ||||||||||| ||||||||||||| ||||| Sbjct: 150360 gcagccgccgccgctgccgctgccgctgcact 150391
>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR21J17, complete sequence Length = 174974 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 472 gcagccgccgctcctgccgctgccgcagcact 503 ||||||||||| ||||||||||||| ||||| Sbjct: 29779 gcagccgccgccgctgccgctgccgctgcact 29810
>dbj|AK083580.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030048D16 product:unclassifiable, full insert sequence Length = 3430 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 2263 tcttcttcccttccttcctc 2282
>ref|NM_067494.2| Caenorhabditis elegans T21D12.9b (T21D12.9) mRNA, complete cds Length = 1882 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 34 caccattatcttcttcccttccttcctc 61 |||||| ||||||||||||| ||||||| Sbjct: 1687 caccatcatcttcttccctttcttcctc 1660
>gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O22 map 3p, complete sequence Length = 211012 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 88438 cccgcagccgctgctcctgccgct 88415
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccgcagcac 502 |||| |||||||||||| |||||||||| Sbjct: 28385204 gccgacgctcctgccgccgccgcagcac 28385231
>gb|AC023826.6| Homo sapiens chromosome 16 clone RP11-380E14, complete sequence Length = 196755 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 470 ccgcagccgccgctcctgccgctgccgcagca 501 |||| ||||||||| |||||||||||| |||| Sbjct: 15612 ccgccgccgccgctgctgccgctgccggagca 15643
>gb|AC093028.13| Homo sapiens 12 BAC RP11-604N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153517 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 131640 tcttcttcccttccttcctc 131659
>gb|AC138466.12| Homo sapiens 12 BAC RP13-977J11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129492 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 gaaaggctcatggagtgtggactg 406 |||||||||| ||||||||||||| Sbjct: 61510 gaaaggctcagggagtgtggactg 61533
>gb|AC109614.9| Mus musculus chromosome 5, clone RP23-107M21, complete sequence Length = 194308 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 150088 tcttcttcccttccttcctc 150069
>gb|AC018505.4|AC018505 Homo sapiens chromosome 3 clone RP11-58I13 map 3p, complete sequence Length = 196044 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 141443 cccgcagccgctgctcctgccgct 141420
>gb|AC018831.4|AC018831 Homo sapiens chromosome 3 clone RP11-481B18 map 3p, complete sequence Length = 178548 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 169824 cccgcagccgctgctcctgccgct 169801
>gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137H10, complete sequence Length = 192814 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 470 ccgcagccgccgctcctgccgctgccgcagca 501 |||| ||||||||| |||||||||||| |||| Sbjct: 59566 ccgccgccgccgctgctgccgctgccggagca 59535
>gb|AC078883.6| Homo sapiens BAC clone RP11-227L6 from 2, complete sequence Length = 169586 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 tccttctctgatgatggctt 458 |||||||||||||||||||| Sbjct: 130581 tccttctctgatgatggctt 130562
>gb|AC055817.12| Mus musculus, clone RP23-154I7, complete sequence Length = 203805 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 141652 tcttcttcccttccttcctc 141633
>ref|XM_233603.3| PREDICTED: Rattus norvegicus ciliary rootlet coiled-coil, rootletin (predicted) (Crocc_predicted), mRNA Length = 6678 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 tcctgccgctgccgcagcac 502 |||||||||||||||||||| Sbjct: 6119 tcctgccgctgccgcagcac 6100
>gb|AC108684.7| Homo sapiens X BAC RP11-359O20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125047 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 acaccattatcttcttccct 52 |||||||||||||||||||| Sbjct: 42171 acaccattatcttcttccct 42152
>gb|AC011599.8|AC011599 Homo sapiens 3 BAC RP11-606C6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 209876 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 68442 cccgcagccgctgctcctgccgct 68465
>dbj|AB018306.1| Homo sapiens mRNA for KIAA0763 protein, partial cds Length = 4148 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 860 cccgcagccgctgctcctgccgct 837
>dbj|AK107634.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-E07, full insert sequence Length = 1973 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ccgccgctcctgccgctgcc 495 |||||||||||||||||||| Sbjct: 1816 ccgccgctcctgccgctgcc 1835
>dbj|AK073541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043D13, full insert sequence Length = 1718 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 gccgccgctcctgccgctgccgcagcac 502 |||| |||||||||||| |||||||||| Sbjct: 196 gccgacgctcctgccgccgccgcagcac 223
>ref|NM_210197.1| Eremothecium gossypii AEL018Cp (AEL018C), mRNA Length = 1152 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 471 cgcagccgccgctcctgccgctgc 494 |||||||||||||||| ||||||| Sbjct: 605 cgcagccgccgctcctcccgctgc 582
>gb|AC108828.17| Mus musculus chromosome 5, clone RP23-153H17, complete sequence Length = 218103 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cttcttcccttccttcctca 62 |||||||||||||||||||| Sbjct: 81529 cttcttcccttccttcctca 81510
>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete sequence Length = 236144 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 472 gcagccgccgctcctgccgctgccgcagcact 503 ||||||||||| ||||||||||||| ||||| Sbjct: 157703 gcagccgccgccgctgccgctgccgctgcact 157734
>gb|AE003536.4| Drosophila melanogaster chromosome 3L, section 49 of 83 of the complete sequence Length = 350428 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 470 ccgcagccgccgctcctgccgctgccgc 497 |||| ||||||||| ||||||||||||| Sbjct: 147452 ccgccgccgccgctgctgccgctgccgc 147479
>emb|AL714010.11| Mouse DNA sequence from clone RP23-455F14 on chromosome X, complete sequence Length = 118604 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcttcttcccttccttcctc 61 |||||||||||||||||||| Sbjct: 78545 tcttcttcccttccttcctc 78564
>emb|X65066.1|TCPO1MRNA T.cruzi mRNA for acidic ribosomal PO protein Length = 1130 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 gccgctcctgccgctgccgc 497 |||||||||||||||||||| Sbjct: 953 gccgctcctgccgctgccgc 972
>gb|AC069271.5| Homo sapiens chromosome 3 clone RP11-715I4 map 3p, complete sequence Length = 229408 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 222140 cccgcagccgctgctcctgccgct 222117
>gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p, complete sequence Length = 184716 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 cccgcagccgccgctcctgccgct 492 ||||||||||| |||||||||||| Sbjct: 24055 cccgcagccgctgctcctgccgct 24032
>gb|L15558.1|TRBRPP0X Trypanosoma cruzi ribosomal protein P0 mRNA, complete cds Length = 1076 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 gccgctcctgccgctgccgc 497 |||||||||||||||||||| Sbjct: 932 gccgctcctgccgctgccgc 951 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,419,167 Number of Sequences: 3902068 Number of extensions: 5419167 Number of successful extensions: 141274 Number of sequences better than 10.0: 160 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140752 Number of HSP's gapped (non-prelim): 522 length of query: 504 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 482 effective length of database: 17,147,199,772 effective search space: 8264950290104 effective search space used: 8264950290104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
