ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart18a09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ010296.1|ZMA010296 Zea mays mRNA for glutathione transferase III(b) Length = 944 Score = 111 bits (56), Expect = 3e-21 Identities = 127/150 (84%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 436 gacggcgacgacatccttttcgagtcgcgcgccatcagtcggtacatcgcgaccaagtac 495 ||||| ||||| |||| |||||||| ||||| |||| ||||||||||| | ||||||| Sbjct: 243 gacggagacgaagtcctcttcgagtcccgcgcgatcaaccggtacatcgccagcaagtac 302 Query: 496 aggtcctccggcacggacctgctgccggcgacggcgtcggcg---aaattggaggtgtgg 552 ||| |||||||||||||| || ||||||||||||||| || ||||||||||| Sbjct: 303 gcgtcggagggcacggacctgctccccgcgacggcgtcggcggcgaagctggaggtgtgg 362 Query: 553 ctggaggtggagtcgcaccacttctacccg 582 |||||||||||||||||||||||||||||| Sbjct: 363 ctggaggtggagtcgcaccacttctacccg 392 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 127 tgctcaacgagaagggcctcgacttcgagatcgtccccgtcgac 170
>gb|BT009137.1| Triticum aestivum clone wl1n.pk0040.b1:fis, full insert mRNA sequence Length = 920 Score = 103 bits (52), Expect = 6e-19 Identities = 126/150 (84%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 436 gacggcgacgacatccttttcgagtcgcgcgccatcagtcggtacatcgcgaccaagtac 495 ||||| ||||| |||| |||||||| ||||| |||| ||||||||||| | ||||||| Sbjct: 239 gacggagacgaagtcctcttcgagtcccgcgcgatcaaccggtacatcgccagcaagtac 298 Query: 496 aggtcctccggcacggacctgctgccggcgacggcgtcggcg---aaattggaggtgtgg 552 ||| |||||||||||||| || ||||||||||||||| || ||||||||||| Sbjct: 299 gcgtcggagggcacggacctgctccccgcgacggcgtcggcggcgaagctggaggtgtgg 358 Query: 553 ctggaggtggagtcgcaccacttctacccg 582 |||||||||||||||||||||||| ||||| Sbjct: 359 ctggaggtggagtcgcaccacttccacccg 388 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 123 tgctcaacgagaagggcctcgacttcgagatcgtccccgtcgac 166
>emb|X04455.1|ZMGGST3B Maize mRNA for glutathione-S-transferase GSTIII (clone GSTIIIB) Length = 859 Score = 95.6 bits (48), Expect = 2e-16 Identities = 125/150 (83%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 436 gacggcgacgacatccttttcgagtcgcgcgccatcagtcggtacatcgcgaccaagtac 495 ||||| ||||| |||| |||||||| || || |||| ||||||||||| | ||||||| Sbjct: 205 gacggagacgaagtcctcttcgagtcccgtgcgatcaaccggtacatcgccagcaagtac 264 Query: 496 aggtcctccggcacggacctgctgccggcgacggcgtcggcg---aaattggaggtgtgg 552 ||| |||||||||||||| || ||||||||||||||| || ||||||||||| Sbjct: 265 gcgtcggagggcacggacctgctccccgcgacggcgtcggcggcgaagctggaggtgtgg 324 Query: 553 ctggaggtggagtcgcaccacttctacccg 582 || ||||||||||||||||||||||||||| Sbjct: 325 ctagaggtggagtcgcaccacttctacccg 354 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 89 tgctcaacgagaagggcctcgacttcgagatcgtccccgtcgac 132
>emb|X06755.1|ZMGST3 Maize mRNA for GSH gluthathione S-transferase III (GST;EC 2.5.1.18) Length = 913 Score = 95.6 bits (48), Expect = 2e-16 Identities = 125/150 (83%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 436 gacggcgacgacatccttttcgagtcgcgcgccatcagtcggtacatcgcgaccaagtac 495 ||||| ||||| |||| |||||||| || || |||| ||||||||||| | ||||||| Sbjct: 252 gacggagacgaagtcctcttcgagtcccgtgcgatcaaccggtacatcgccagcaagtac 311 Query: 496 aggtcctccggcacggacctgctgccggcgacggcgtcggcg---aaattggaggtgtgg 552 ||| |||||||||||||| || ||||||||||||||| || ||||||||||| Sbjct: 312 gcgtcggagggcacggacctgctccccgcgacggcgtcggcggcgaagctggaggtgtgg 371 Query: 553 ctggaggtggagtcgcaccacttctacccg 582 |||||||||||||||||||||||| ||||| Sbjct: 372 ctggaggtggagtcgcaccacttccacccg 401 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 136 tgctcaacgagaagggcctcgacttcgagatcgtccccgtcgac 179
>emb|X04375.1|ZMGST3A Maize mRNA for glutathione-S-transferase GSTIII (clone GSTIIIA) Length = 840 Score = 95.6 bits (48), Expect = 2e-16 Identities = 125/150 (83%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 436 gacggcgacgacatccttttcgagtcgcgcgccatcagtcggtacatcgcgaccaagtac 495 ||||| ||||| |||| |||||||| || || |||| ||||||||||| | ||||||| Sbjct: 186 gacggagacgaagtcctcttcgagtcccgtgcgatcaaccggtacatcgccagcaagtac 245 Query: 496 aggtcctccggcacggacctgctgccggcgacggcgtcggcg---aaattggaggtgtgg 552 ||| |||||||||||||| || ||||||||||||||| || ||||||||||| Sbjct: 246 gcgtcggagggcacggacctgctccccgcgacggcgtcggcggcgaagctggaggtgtgg 305 Query: 553 ctggaggtggagtcgcaccacttctacccg 582 || ||||||||||||||||||||||||||| Sbjct: 306 ctagaggtggagtcgcaccacttctacccg 335 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 70 tgctcaacgagaagggcctcgacttcgagatcgtccccgtcgac 113
>emb|AJ010295.1|ZMA010295 Zea mays mRNA for glutathione transferase III(a) Length = 906 Score = 95.6 bits (48), Expect = 2e-16 Identities = 125/150 (83%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 436 gacggcgacgacatccttttcgagtcgcgcgccatcagtcggtacatcgcgaccaagtac 495 ||||| ||||| |||| |||||||| || || |||| ||||||||||| | ||||||| Sbjct: 254 gacggagacgaagtcctcttcgagtcccgtgcgatcaaccggtacatcgccagcaagtac 313 Query: 496 aggtcctccggcacggacctgctgccggcgacggcgtcggcg---aaattggaggtgtgg 552 ||| |||||||||||||| || ||||||||||||||| || ||||||||||| Sbjct: 314 gcgtcggagggcacggacctgctccccgcgacggcgtcggcggcgaagctggaggtgtgg 373 Query: 553 ctggaggtggagtcgcaccacttctacccg 582 || ||||||||||||||||||||||||||| Sbjct: 374 ctagaggtggagtcgcaccacttctacccg 403 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 138 tgctcaacgagaagggcctcgacttcgagatcgtccccgtcgac 181
>gb|AY105647.1| Zea mays PCO132886 mRNA sequence Length = 1003 Score = 95.6 bits (48), Expect = 2e-16 Identities = 125/150 (83%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 436 gacggcgacgacatccttttcgagtcgcgcgccatcagtcggtacatcgcgaccaagtac 495 ||||| ||||| |||| |||||||| || || |||| ||||||||||| | ||||||| Sbjct: 322 gacggagacgaagtcctcttcgagtcccgtgcgatcaaccggtacatcgccagcaagtac 381 Query: 496 aggtcctccggcacggacctgctgccggcgacggcgtcggcg---aaattggaggtgtgg 552 ||| |||||||||||||| || ||||||||||||||| || ||||||||||| Sbjct: 382 gcgtcggagggcacggacctgctccccgcgacggcgtcggcggcgaagctggaggtgtgg 441 Query: 553 ctggaggtggagtcgcaccacttctacccg 582 |||||||||||||||||||||||| ||||| Sbjct: 442 ctggaggtggagtcgcaccacttccacccg 471 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 206 tgctcaacgagaagggcctcgacttcgagatcgtccccgtcgac 249
>ref|NM_190039.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 91.7 bits (46), Expect = 2e-15 Identities = 96/112 (85%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 475 cggtacatcgcgaccaagtacaggtcctccggcacggacctgctgccggcgacggcgtcg 534 |||||||||||||||||||||| | | ||| | ||||| ||||||||| ||||||| Sbjct: 229 cggtacatcgcgaccaagtacaaggcggagggcgccgaccttctgccggcggaggcgtcg 288 Query: 535 ---gcgaaattggaggtgtggctggaggtggagtcgcaccacttctacccgg 583 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 ccggcgaagctggaggtgtggctggaggtggagtcgcaccacttctacccgg 340 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||| ||||||||||||||||||| ||| |||||| ||||||| Sbjct: 74 tgctgaacgagaagggcctcgacttcgacctcgtccccgtcgac 117
>gb|AF309383.1| Oryza sativa (japonica cultivar-group) clone S10202_1A putative glutathione S-transferase OsGSTF4 mRNA, complete cds Length = 1032 Score = 91.7 bits (46), Expect = 2e-15 Identities = 96/112 (85%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 475 cggtacatcgcgaccaagtacaggtcctccggcacggacctgctgccggcgacggcgtcg 534 |||||||||||||||||||||| | | ||| | ||||| ||||||||| ||||||| Sbjct: 309 cggtacatcgcgaccaagtacaaggcggagggcgccgaccttctgccggcggaggcgtcg 368 Query: 535 ---gcgaaattggaggtgtggctggaggtggagtcgcaccacttctacccgg 583 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 ccggcgaagctggaggtgtggctggaggtggagtcgcaccacttctacccgg 420 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||| ||||||||||||||||||| ||| |||||| ||||||| Sbjct: 154 tgctgaacgagaagggcctcgacttcgacctcgtccccgtcgac 197
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 2e-15 Identities = 96/112 (85%), Gaps = 3/112 (2%) Strand = Plus / Minus Query: 475 cggtacatcgcgaccaagtacaggtcctccggcacggacctgctgccggcgacggcgtcg 534 |||||||||||||||||||||| | | ||| | ||||| ||||||||| ||||||| Sbjct: 40955659 cggtacatcgcgaccaagtacaaggcggagggcgccgaccttctgccggcggaggcgtcg 40955600 Query: 535 ---gcgaaattggaggtgtggctggaggtggagtcgcaccacttctacccgg 583 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 40955599 ccggcgaagctggaggtgtggctggaggtggagtcgcaccacttctacccgg 40955548 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||| ||||||||||||||||||| ||| |||||| ||||||| Sbjct: 40956370 tgctgaacgagaagggcctcgacttcgacctcgtccccgtcgac 40956327 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcggtgagcagg 175 ||||| ||||||| |||||||||||||| Sbjct: 36187548 gccgcggccggcaccggcggtgagcagg 36187521 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 33738823 gccgccgccggcagcggcgg 33738804 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 8386930 gccgccgccggcagcggcgg 8386911
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 91.7 bits (46), Expect = 2e-15 Identities = 96/112 (85%), Gaps = 3/112 (2%) Strand = Plus / Minus Query: 475 cggtacatcgcgaccaagtacaggtcctccggcacggacctgctgccggcgacggcgtcg 534 |||||||||||||||||||||| | | ||| | ||||| ||||||||| ||||||| Sbjct: 84084 cggtacatcgcgaccaagtacaaggcggagggcgccgaccttctgccggcggaggcgtcg 84025 Query: 535 ---gcgaaattggaggtgtggctggaggtggagtcgcaccacttctacccgg 583 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 84024 ccggcgaagctggaggtgtggctggaggtggagtcgcaccacttctacccgg 83973 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||| ||||||||||||||||||| ||| |||||| ||||||| Sbjct: 84795 tgctgaacgagaagggcctcgacttcgacctcgtccccgtcgac 84752
>dbj|AK103927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D04, full insert sequence Length = 871 Score = 91.7 bits (46), Expect = 2e-15 Identities = 96/112 (85%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 475 cggtacatcgcgaccaagtacaggtcctccggcacggacctgctgccggcgacggcgtcg 534 |||||||||||||||||||||| | | ||| | ||||| ||||||||| ||||||| Sbjct: 310 cggtacatcgcgaccaagtacaaggcggagggcgccgaccttctgccggcggaggcgtcg 369 Query: 535 ---gcgaaattggaggtgtggctggaggtggagtcgcaccacttctacccgg 583 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 ccggcgaagctggaggtgtggctggaggtggagtcgcaccacttctacccgg 421 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||| ||||||||||||||||||| ||| |||||| ||||||| Sbjct: 155 tgctgaacgagaagggcctcgacttcgacctcgtccccgtcgac 198
>dbj|AK059985.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G06, full insert sequence Length = 963 Score = 91.7 bits (46), Expect = 2e-15 Identities = 96/112 (85%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 475 cggtacatcgcgaccaagtacaggtcctccggcacggacctgctgccggcgacggcgtcg 534 |||||||||||||||||||||| | | ||| | ||||| ||||||||| ||||||| Sbjct: 385 cggtacatcgcgaccaagtacaaggcggagggcgccgaccttctgccggcggaggcgtcg 444 Query: 535 ---gcgaaattggaggtgtggctggaggtggagtcgcaccacttctacccgg 583 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 ccggcgaagctggaggtgtggctggaggtggagtcgcaccacttctacccgg 496 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 225 tgctcaacgagaagggcctcgactacgagctcgtcgtcgtcgac 268 |||| ||||||||||||||||||| ||| |||||| ||||||| Sbjct: 230 tgctgaacgagaagggcctcgacttcgacctcgtccccgtcgac 273
>gb|BT009259.1| Triticum aestivum clone wlk4.pk0015.a10:fis, full insert mRNA sequence Length = 788 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 524 cgacggcgtcggcgaaattggaggtgtggctggaggtggagtcgcaccacttctacccg 582 ||||| ||||||| || |||||| |||||||||||||||||||||||||||||||||| Sbjct: 316 cgacgccgtcggccaagctggaggcgtggctggaggtggagtcgcaccacttctacccg 374 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 454 ttcgagtcgcgcgccatcagtcggtacatcgcgaccaagtac 495 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 258 ttcgagtcgcgcgccatcaaccggtacatcgcgaccaagtac 299
>emb|AJ440794.1|TAE440794 Triticum aestivum mRNA for glutathione transferase F5 (gstf5 gene) Length = 866 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 524 cgacggcgtcggcgaaattggaggtgtggctggaggtggagtcgcaccacttctacccg 582 ||||| ||||||| || |||||| |||||||||||||||||||||||||||||||||| Sbjct: 298 cgacgccgtcggccaagctggaggcgtggctggaggtggagtcgcaccacttctacccg 356 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 454 ttcgagtcgcgcgccatcagtcggtacatcgcgaccaagtac 495 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 240 ttcgagtcgcgcgccatcaaccggtacatcgcgaccaagtac 281
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 203 aactcggtgcgcatcgcggcgctgctc 229 |||||||||||||||||| |||||||| Sbjct: 7592611 aactcggtgcgcatcgcgccgctgctc 7592585 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gccgagccgccgccggcagc 162 |||||||||||||||||||| Sbjct: 6263280 gccgagccgccgccggcagc 6263299
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 241 cctcgactacgagctcgtcgtcgtcgacga 270 |||||||| ||| ||||||||||||||||| Sbjct: 10557119 cctcgactccgacctcgtcgtcgtcgacga 10557148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 tgccggcgacggcgtcggcga 538 ||||||||||||||||||||| Sbjct: 26990856 tgccggcgacggcgtcggcga 26990876 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 tgccggcgacggcgtcggcg 537 |||||||||||||||||||| Sbjct: 24580787 tgccggcgacggcgtcggcg 24580806 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gctgaagagaagtgatcaag 134 |||||||||||||||||||| Sbjct: 23657506 gctgaagagaagtgatcaag 23657487
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 cgccggagttcctcgccatcaa 300 |||||||||||||||||||||| Sbjct: 43780 cgccggagttcctcgccatcaa 43801
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 241 cctcgactacgagctcgtcgtcgtcgacga 270 |||||||| ||| ||||||||||||||||| Sbjct: 112932 cctcgactccgacctcgtcgtcgtcgacga 112961
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 514 ctgctgccggcgacggcgtcggcgaa 539 |||||||||||| ||||||||||||| Sbjct: 25366104 ctgctgccggcggcggcgtcggcgaa 25366079 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 tcgatctcgccggtcgccaca 102 ||||||||||||||||||||| Sbjct: 5285974 tcgatctcgccggtcgccaca 5285994
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 241 cctcgactacgagctcgtcgtcgtcgacga 270 |||||||| ||| ||||||||||||||||| Sbjct: 10555220 cctcgactccgacctcgtcgtcgtcgacga 10555249 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 tgccggcgacggcgtcggcga 538 ||||||||||||||||||||| Sbjct: 27082179 tgccggcgacggcgtcggcga 27082199 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 tgccggcgacggcgtcggcg 537 |||||||||||||||||||| Sbjct: 24498256 tgccggcgacggcgtcggcg 24498275 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gctgaagagaagtgatcaag 134 |||||||||||||||||||| Sbjct: 23650534 gctgaagagaagtgatcaag 23650515
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 514 ctgctgccggcgacggcgtcggcgaa 539 |||||||||||| ||||||||||||| Sbjct: 40113 ctgctgccggcggcggcgtcggcgaa 40088
>dbj|AK121731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082H10, full insert sequence Length = 1850 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 241 cctcgactacgagctcgtcgtcgtcgacga 270 |||||||| ||| ||||||||||||||||| Sbjct: 976 cctcgactccgacctcgtcgtcgtcgacga 1005
>dbj|AK119594.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D07, full insert sequence Length = 2009 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 241 cctcgactacgagctcgtcgtcgtcgacga 270 |||||||| ||| ||||||||||||||||| Sbjct: 1147 cctcgactccgacctcgtcgtcgtcgacga 1176
>dbj|AK068319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149E13, full insert sequence Length = 1776 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 514 ctgctgccggcgacggcgtcggcgaa 539 |||||||||||| ||||||||||||| Sbjct: 191 ctgctgccggcggcggcgtcggcgaa 216
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 ggccgagccgccgccggcagcggcg 166 |||||||||||||||||| |||||| Sbjct: 555530 ggccgagccgccgccggccgcggcg 555554 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccatggccgagccgccgccg 157 |||||||||||||||||||| Sbjct: 478589 ccatggccgagccgccgccg 478570
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 247 ctacgagctcgtcgtcgtcgacgac 271 ||||||| ||||||||||||||||| Sbjct: 1693103 ctacgagatcgtcgtcgtcgacgac 1693079 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 cggcgacggcgtcggcgaaa 540 |||||||||||||||||||| Sbjct: 2599040 cggcgacggcgtcggcgaaa 2599059
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 cgagctcgtcgtcgtcgacga 270 ||||||||||||||||||||| Sbjct: 2367528 cgagctcgtcgtcgtcgacga 2367548
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 gcatcgcggcgctgctcaacg 233 ||||||||||||||||||||| Sbjct: 448780 gcatcgcggcgctgctcaacg 448800
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 247 ctacgagctcgtcgtcgtcgacgac 271 ||||||| ||||||||||||||||| Sbjct: 3028065 ctacgagatcgtcgtcgtcgacgac 3028041 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 cggcgacggcgtcggcgaaa 540 |||||||||||||||||||| Sbjct: 779082 cggcgacggcgtcggcgaaa 779101
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 cgagctcgtcgtcgtcgacga 270 ||||||||||||||||||||| Sbjct: 2017037 cgagctcgtcgtcgtcgacga 2017017
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ctcgccggtcgccacaccgtgcccg 111 |||||||||| |||||||||||||| Sbjct: 86470 ctcgccggtctccacaccgtgcccg 86494
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 247 ctacgagctcgtcgtcgtcgacgac 271 ||||||| ||||||||||||||||| Sbjct: 2176872 ctacgagatcgtcgtcgtcgacgac 2176848
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 518 tgccggcgacggcgtcggcga 538 ||||||||||||||||||||| Sbjct: 68543 tgccggcgacggcgtcggcga 68523
>dbj|AP005652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0015B15 Length = 123083 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 tcgatctcgccggtcgccaca 102 ||||||||||||||||||||| Sbjct: 27486 tcgatctcgccggtcgccaca 27506
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 tcgatctcgccggtcgccaca 102 ||||||||||||||||||||| Sbjct: 152696 tcgatctcgccggtcgccaca 152716
>dbj|AK120860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024G08, full insert sequence Length = 2232 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 518 tgccggcgacggcgtcggcga 538 ||||||||||||||||||||| Sbjct: 60 tgccggcgacggcgtcggcga 40
>ref|XM_310775.2| Anopheles gambiae str. PEST ENSANGP00000015591 (ENSANGG00000013102), partial mRNA Length = 2631 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 ccggcacggacctgctgccgg 523 ||||||||||||||||||||| Sbjct: 1322 ccggcacggacctgctgccgg 1342
>gb|AY104620.1| Zea mays PCO084930 mRNA sequence Length = 764 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ccgagccgccgccggcagcgg 164 ||||||||||||||||||||| Sbjct: 180 ccgagccgccgccggcagcgg 200
>gb|AF054585.1|AF054585 Streptomyces coelicolor indoleglycerol phosphate synthase (trpC), tryptophan synthase beta subunit (trpB), and tryptophan synthase alpha subunit (trpA) genes, complete cds; and unknown gene Length = 5093 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ctcgccggtcgccacaccgtgcccg 111 |||||||||| |||||||||||||| Sbjct: 3104 ctcgccggtctccacaccgtgcccg 3080
>gb|AY563322.1| Embellisia allii major allergen alt a1 (alt a 1) gene, partial cds Length = 470 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 gccggcagcggcggtgagcag 174 ||||||||||||||||||||| Sbjct: 25 gccggcagcggcggtgagcag 5
>dbj|AP004482.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT17C05, TM0014, complete sequence Length = 129532 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 ctcgtcgtcgtcgacgacacc 274 ||||||||||||||||||||| Sbjct: 67553 ctcgtcgtcgtcgacgacacc 67573
>ref|NM_187875.1| Oryza sativa (japonica cultivar-group), Ozsa8319 predicted mRNA Length = 882 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 765 gccgccgccggcagcggcgg 784
>ref|XM_475644.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 7053 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 62 gccgccgccggcagcggcgg 43
>ref|XM_474925.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1356 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 48 gccgccgccggcagcggcgg 29
>ref|XM_465098.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1605 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 47 gccgccgccggcagcggcgg 66
>ref|NM_196560.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0075H14.16), mRNA Length = 1188 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 253 gccgccgccggcagcggcgg 272
>ref|NM_196189.1| Oryza sativa (japonica cultivar-group) putative protein synthesis inhibitor (OSJNBa0019N10.19), mRNA Length = 1104 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tcgtcgtcgtcgacgacacc 274 |||||||||||||||||||| Sbjct: 353 tcgtcgtcgtcgacgacacc 334
>ref|NM_190559.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcggtgagcagg 175 ||||| ||||||| |||||||||||||| Sbjct: 285 gccgcggccggcaccggcggtgagcagg 312
>ref|NM_190904.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3033 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 1354 gccgccgccggcagcggcgg 1373
>ref|XM_469284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcggtgagcagg 175 |||||||||| || |||||||||||||| Sbjct: 235 gccgccgccgccatcggcggtgagcagg 262
>ref|XM_473084.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1968 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gccggcgacggcgtcggcga 538 |||||||||||||||||||| Sbjct: 319 gccggcgacggcgtcggcga 338
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 agctcgtcgtcgtcgacgac 271 |||||||||||||||||||| Sbjct: 42957 agctcgtcgtcgtcgacgac 42938
>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03 map E1419S, complete sequence Length = 150945 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gctgaagagaagtgatcaag 134 |||||||||||||||||||| Sbjct: 105589 gctgaagagaagtgatcaag 105570
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 tgccggcgacggcgtcggcg 537 |||||||||||||||||||| Sbjct: 55073 tgccggcgacggcgtcggcg 55054
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 76404 gccgccgccggcagcggcgg 76423
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 agctcgtcgtcgtcgacgac 271 |||||||||||||||||||| Sbjct: 111180 agctcgtcgtcgtcgacgac 111161
>emb|Y15252.1|PSNARXL Pseudomonas aeruginosa narX, narL, narK1, narK2, narG, narH, narJ, narI, nifM, moaA genes Length = 15168 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 tcgcggcgctgctcaacgag 235 |||||||||||||||||||| Sbjct: 12397 tcgcggcgctgctcaacgag 12416
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gcgctgctcaacgagaaggg 240 |||||||||||||||||||| Sbjct: 2794792 gcgctgctcaacgagaaggg 2794811
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gccggcgacggcgtcggcga 538 |||||||||||||||||||| Sbjct: 39801 gccggcgacggcgtcggcga 39820
>emb|AL606601.3|OSJN00029 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055H05, complete sequence Length = 152329 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 93201 gccgccgccggcagcggcgg 93220
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2 Length = 178073 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 gcgttccaggacggcgacga 446 |||||||||||||||||||| Sbjct: 123087 gcgttccaggacggcgacga 123068
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 gcgttccaggacggcgacga 446 |||||||||||||||||||| Sbjct: 54987 gcgttccaggacggcgacga 55006
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tcgtcgtcgtcgacgacacc 274 |||||||||||||||||||| Sbjct: 122418 tcgtcgtcgtcgacgacacc 122399
>tpg|BK005059.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 56 (WRKY56) gene, complete cds Length = 2622 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcggtgagcagg 175 ||||| ||||||| |||||||||||||| Sbjct: 2220 gccgcggccggcaccggcggtgagcagg 2247
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 tgccggcgacggcgtcggcg 537 |||||||||||||||||||| Sbjct: 12832 tgccggcgacggcgtcggcg 12851
>gb|AE012222.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 130 of 460 of the complete genome Length = 11629 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cgccggcagcggcggtgagc 172 |||||||||||||||||||| Sbjct: 10696 cgccggcagcggcggtgagc 10715
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 cgacggcgtcggcgaaattg 543 |||||||||||||||||||| Sbjct: 273631 cgacggcgtcggcgaaattg 273612
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tcgtcgtcgtcgacgacacc 274 |||||||||||||||||||| Sbjct: 109962 tcgtcgtcgtcgacgacacc 109981
>gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, complete sequence Length = 159969 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 ccgagccgccgccggcagcggcgg 167 ||||||||||| |||||||||||| Sbjct: 148543 ccgagccgccggcggcagcggcgg 148520
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cgccggcagcggcggtgagc 172 |||||||||||||||||||| Sbjct: 3598606 cgccggcagcggcggtgagc 3598587
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 521 cggcgacggcgtcggcgaaattgg 544 |||||||||| ||||||||||||| Sbjct: 5253042 cggcgacggcttcggcgaaattgg 5253019
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gccggcgacggcgtcggcga 538 |||||||||||||||||||| Sbjct: 25158134 gccggcgacggcgtcggcga 25158153 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 8031077 gccgccgccggcagcggcgg 8031096
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 25626411 gccgccgccggcagcggcgg 25626430
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 agctcgtcgtcgtcgacgac 271 |||||||||||||||||||| Sbjct: 19934113 agctcgtcgtcgtcgacgac 19934094
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 14506682 gccgccgccggcagcggcgg 14506663 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tcgtcgtcgtcgacgacacc 274 |||||||||||||||||||| Sbjct: 11804357 tcgtcgtcgtcgacgacacc 11804338
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 agctcgtcgtcgtcgacgac 271 |||||||||||||||||||| Sbjct: 18645081 agctcgtcgtcgtcgacgac 18645062
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 3654057 gccgccgccggcagcggcgg 3654076
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 11477448 gccgccgccggcagcggcgg 11477467
>gb|AC025906.2|AC025906 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0075H14, complete sequence Length = 155420 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 121045 gccgccgccggcagcggcgg 121026
>dbj|AB086653.1| Streptomyces halstedii vicenistatin biosynthetic gene cluster (vinR1, vinA, vinB, vinC, vinP2, vinP3, vinP4, vinG, vinF, vinD, vinE, vinH, vinI, vinJ, vinK, vinL, vinM, vinN, vinO, vinP1), partial and complete cds Length = 64492 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 gacctgctgccggcgacggc 530 |||||||||||||||||||| Sbjct: 32262 gacctgctgccggcgacggc 32281
>gb|AE004804.1| Pseudomonas aeruginosa PAO1, section 365 of 529 of the complete genome Length = 15098 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tcgcggcgctgctcaacgag 235 |||||||||||||||||||| Sbjct: 9551 tcgcggcgctgctcaacgag 9532
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcggtgagcagg 175 ||||| ||||||| |||||||||||||| Sbjct: 64561 gccgcggccggcaccggcggtgagcagg 64534
>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0503G09 Length = 59843 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 51556 gccgccgccggcagcggcgg 51537
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 1885 gccgccgccggcagcggcgg 1866
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030M21 Length = 155970 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 59940 gccgccgccggcagcggcgg 59959
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 cggcgacggcgtcggcgaaattgg 544 |||||||||| ||||||||||||| Sbjct: 2514011 cggcgacggcctcggcgaaattgg 2514034
>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699H05 Length = 144850 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 91893 gccgccgccggcagcggcgg 91874
>dbj|AK120491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119G16, full insert sequence Length = 2000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 295 gccgccgccggcagcggcgg 314
>dbj|AK108904.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-F09, full insert sequence Length = 1186 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 845 gccgccgccggcagcggcgg 864
>dbj|AK105486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B08, full insert sequence Length = 1605 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 47 gccgccgccggcagcggcgg 66
>dbj|AK102514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095J08, full insert sequence Length = 1669 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 77 gccgccgccggcagcggcgg 58
>emb|CT027588.10| Mouse DNA sequence from clone RP23-461P14 on chromosome 9, complete sequence Length = 182404 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cactccccagccactgctac 340 |||||||||||||||||||| Sbjct: 104995 cactccccagccactgctac 105014
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 14514924 gccgccgccggcagcggcgg 14514905 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tcgtcgtcgtcgacgacacc 274 |||||||||||||||||||| Sbjct: 11811697 tcgtcgtcgtcgacgacacc 11811678
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 agctcgtcgtcgtcgacgac 271 |||||||||||||||||||| Sbjct: 20219092 agctcgtcgtcgtcgacgac 20219073
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 25554587 gccgccgccggcagcggcgg 25554606
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gccggcgacggcgtcggcga 538 |||||||||||||||||||| Sbjct: 105561 gccggcgacggcgtcggcga 105580
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccgccgccggcagcggcgg 167 |||||||||||||||||||| Sbjct: 47307 gccgccgccggcagcggcgg 47288
>emb|AL845437.14| Zebrafish DNA sequence from clone DKEY-98J1 in linkage group 23, complete sequence Length = 239084 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 gccggtcgccacaccgtgcccgcc 113 |||| ||||||||||||||||||| Sbjct: 200725 gccgctcgccacaccgtgcccgcc 200748 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,813,449 Number of Sequences: 3902068 Number of extensions: 3813449 Number of successful extensions: 95408 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90912 Number of HSP's gapped (non-prelim): 4479 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
