ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart17h09 |
|---|---|
| Clone Library Name | barley_pub |
>NUD15_ARATH (Q8GYB1) Nudix hydrolase 15, mitochondrial precursor (EC 3.6.1.-)| (AtNUDT15) Length = 285 Score = 144 bits (362), Expect = 2e-34 Identities = 83/171 (48%), Positives = 104/171 (60%), Gaps = 21/171 (12%) Frame = +3 Query: 75 IEALIRRLRLHQPPPSPYTGDP---------------------STAATPAAANLFQPRRA 191 + AL ++LR ++PPPS D S A + F+P+RA Sbjct: 43 LAALAQQLRQYKPPPSSSFDDSEEMQTDQETAGKVVSQVGFQESIAPLSKDPDRFKPKRA 102 Query: 192 AVLVCLFQDAAGELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREAKEEIGL 371 AVL+CLF+ G+LRV+LTKR+S LSTHSGEV+LP TA REA+EEIGL Sbjct: 103 AVLICLFEGDDGDLRVILTKRSSKLSTHSGEVSLPGGKAEEDDKDDGMTATREAEEEIGL 162 Query: 372 DPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 DPSLV VV+SLE FLSKHLL V+PV+GIL D + F PI N EV+ +FD P Sbjct: 163 DPSLVDVVTSLEPFLSKHLLRVIPVIGILRDKNKFNPIPNPGEVEAVFDAP 213
>NUD22_ARATH (O22951) Nudix hydrolase 22, chloroplast precursor (EC 3.6.1.-)| (AtNUDT22) Length = 302 Score = 131 bits (329), Expect = 1e-30 Identities = 69/117 (58%), Positives = 85/117 (72%) Frame = +3 Query: 174 FQPRRAAVLVCLFQDAAGELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREA 353 F+P++AAVL+CLF+ G+LRV+LTKR+S+LSTHSGEV+LP TA REA Sbjct: 71 FRPKKAAVLICLFEGDDGDLRVILTKRSSTLSTHSGEVSLPGGKAEEHDKDDGITATREA 130 Query: 354 KEEIGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 +EEIGLDPSLV VV+ LE FLS+HLL V+PVVGIL D AF P N EV+ + D P Sbjct: 131 EEEIGLDPSLVDVVAFLEPFLSQHLLRVIPVVGILWDRKAFNPTPNPAEVEAVLDAP 187
>NUD11_ARATH (Q8LET2) Probable coenzyme A diphosphatase NUDT11 (EC 3.6.1.-)| (Nudix hydrolase 11) (AtNUDT11) Length = 222 Score = 118 bits (295), Expect = 1e-26 Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 3/120 (2%) Frame = +3 Query: 174 FQPRRAAVLVCLFQDAA---GELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTAL 344 F + +AVLVCL+Q+ ELRV+LTKR+++LS+H GEVALP TAL Sbjct: 29 FPAKSSAVLVCLYQEQREDKNELRVILTKRSTTLSSHPGEVALPGGKRDQEDKDDIATAL 88 Query: 345 REAKEEIGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 REA+EEIGLDPSLVT++S LE F++K + V PV+G L D AFK + N EV++IFDVP Sbjct: 89 REAREEIGLDPSLVTIISVLEPFVNKKGMSVAPVIGFLHDKKAFKQLPNPAEVEEIFDVP 148
>NUDT7_MOUSE (Q99P30) Peroxisomal coenzyme A diphosphatase NUDT7 (EC 3.6.1.-)| (Nucleoside diphosphate-linked moiety X motif 7) (Nudix motif 7) Length = 236 Score = 66.6 bits (161), Expect = 4e-11 Identities = 40/100 (40%), Positives = 53/100 (53%) Frame = +3 Query: 225 GELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREAKEEIGLDPSLVTVVSSL 404 G+L ++ T R+ L GEV P TALREA+EE+GL P V VVS L Sbjct: 51 GKLYLMFTVRSDKLKREPGEVCFPGGKRDPVDTDDTATALREAQEEVGLHPHQVEVVSHL 110 Query: 405 EHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 ++ + +V PVVG L H F+ N DEV ++F VP Sbjct: 111 VPYVFDNDALVTPVVGFLD--HNFQAQPNADEVKEVFFVP 148
>PCD1_YEAST (Q12524) Peroxisomal coenzyme A diphosphatase 1, peroxisomal| precursor (EC 3.6.1.-) Length = 340 Score = 62.4 bits (150), Expect = 7e-10 Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 26/140 (18%) Frame = +3 Query: 183 RRAAVLVCLFQDAAGELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREAKEE 362 R +AV++ LF GELRVLLTKR+ +L + SG+V+ P A REA+EE Sbjct: 38 RNSAVIILLFIGMKGELRVLLTKRSRTLRSFSGDVSFPGGKADYFQETFESVARREAEEE 97 Query: 363 IGL--DPSLV---------TVVSSLEHFLSKHLLVVVPVVGIL---------------SD 464 IGL DP ++ +V + +LS+ L V P+V L D Sbjct: 98 IGLPHDPEVLHKEFGMKLDNLVMDMPCYLSRTFLSVKPMVCFLYKDKLEKHEDKYKVPLD 157 Query: 465 IHAFKPILNVDEVDDIFDVP 524 I F LN E +F VP Sbjct: 158 IRKFFGKLNPGETSSLFSVP 177
>YEAB_ECOLI (P43337) Hypothetical nudix hydrolase yeaB| Length = 192 Score = 58.2 bits (139), Expect = 1e-08 Identities = 40/114 (35%), Positives = 59/114 (51%) Frame = +3 Query: 183 RRAAVLVCLFQDAAGELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREAKEE 362 R+AAVL+ + + L LLT+R+ L H+G+VA P ALREA+EE Sbjct: 30 RQAAVLIPIVRRPQPGL--LLTQRSIHLRKHAGQVAFPGGAVDDTDASAIAAALREAEEE 87 Query: 363 IGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 + + PS V V+ L S V PVVGI+ ++ + DEV +F++P Sbjct: 88 VAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYR--ASEDEVSAVFEMP 139
>NUDT7_HUMAN (P0C024) Peroxisomal coenzyme A diphosphatase NUDT7 (EC 3.6.1.-)| (Nucleoside diphosphate-linked moiety X motif 7) (Nudix motif 7) Length = 238 Score = 57.8 bits (138), Expect = 2e-08 Identities = 38/100 (38%), Positives = 49/100 (49%) Frame = +3 Query: 225 GELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREAKEEIGLDPSLVTVVSSL 404 G+L +L T R+ L GEV P TALREA+EE+GL P V VV L Sbjct: 51 GKLHLLFTVRSEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCL 110 Query: 405 EHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 L ++ P VG++ H F+ N EV D+F VP Sbjct: 111 VPCLIDTDTLITPFVGLID--HNFQAQPNPAEVKDVFLVP 148
>YEAB_SALTY (P0A2K9) Hypothetical nudix hydrolase yeaB| Length = 192 Score = 57.0 bits (136), Expect = 3e-08 Identities = 40/114 (35%), Positives = 58/114 (50%) Frame = +3 Query: 183 RRAAVLVCLFQDAAGELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREAKEE 362 R+AAVL+ + + L LLT+RA L H+G+VA P ALREA+EE Sbjct: 30 RQAAVLIPVVRRPQPGL--LLTQRAIHLRKHAGQVAFPGGAVDSTDASLIAAALREAQEE 87 Query: 363 IGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 + + P V V+ L S V PVVGI+ ++ + DEV +F++P Sbjct: 88 VAIPPQAVEVIGVLPPVDSVTGFQVTPVVGIIPPNLPWR--ASEDEVSAVFEMP 139
>YEAB_SALTI (P0A2L0) Hypothetical nudix hydrolase yeaB| Length = 192 Score = 57.0 bits (136), Expect = 3e-08 Identities = 40/114 (35%), Positives = 58/114 (50%) Frame = +3 Query: 183 RRAAVLVCLFQDAAGELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREAKEE 362 R+AAVL+ + + L LLT+RA L H+G+VA P ALREA+EE Sbjct: 30 RQAAVLIPVVRRPQPGL--LLTQRAIHLRKHAGQVAFPGGAVDSTDASLIAAALREAQEE 87 Query: 363 IGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 + + P V V+ L S V PVVGI+ ++ + DEV +F++P Sbjct: 88 VAIPPQAVEVIGVLPPVDSVTGFQVTPVVGIIPPNLPWR--ASEDEVSAVFEMP 139
>NDX3_CAEEL (Q23236) Nudix hydrolase 3 (EC 3.6.1.-)| Length = 188 Score = 53.1 bits (126), Expect = 4e-07 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 2/102 (1%) Frame = +3 Query: 225 GELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREAKEEIGLDPSLVTVVSSL 404 G VLLTKR+ L +H GEV P TALRE EEIG++ V + L Sbjct: 12 GRDSVLLTKRSIHLRSHRGEVCFP-GGRMDPGETTTETALRETFEEIGVNAESVEIWGHL 70 Query: 405 EHFLSKHL-LVVVPVVGILSDIHAFKP-ILNVDEVDDIFDVP 524 + + + V P+VG +SD + ++N DEV +F +P Sbjct: 71 KSVIRRQADFNVTPIVGYISDERVLENLVVNSDEVQAVFTIP 112
>NDX8_CAEEL (Q9NA25) Peroxisomal coenzyme A diphosphatase ndx-8 (EC 3.6.1.-)| (Nudix hydrolase 8) Length = 234 Score = 52.8 bits (125), Expect = 6e-07 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 2/114 (1%) Frame = +3 Query: 189 AAVLVCLFQDAAGELRVLLTKRASSLSTHSGEVALP-XXXXXXXXXXXXXTALREAKEEI 365 A VL+ L D + +L+VLL R+ L H GEV P TA+REA EE+ Sbjct: 30 AGVLILLHDDGSEKLKVLLCVRSRQLRRHPGEVCFPGGMMDDEDGQNVRRTAIREAYEEV 89 Query: 366 GLDPS-LVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 G++ + V+ +L F ++ +++ P V +L F +L++ EV+ IF +P Sbjct: 90 GVNENDDYLVLGNLPAFRARFGVLIHPTVALLRRPPTF--VLSIGEVESIFWIP 141
>NUDT8_MOUSE (Q9CR24) Nucleoside diphosphate-linked moiety X motif 8,| mitochondrial precursor (EC 3.6.1.-) (Nudix motif 8) Length = 210 Score = 51.2 bits (121), Expect = 2e-06 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 5/120 (4%) Frame = +3 Query: 177 QPRRAAVLV--CLFQDAAGELRVLLTKRASSL-STHSGEVALPXXXXXXXXXXXXXTALR 347 +P AAVLV CL + G +L T R+S L H GEV+ P TALR Sbjct: 28 RPAAAAVLVPLCLVR---GVPALLYTLRSSRLVGRHKGEVSFPGGKCDPDDQDVIHTALR 84 Query: 348 EAKEEIGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILS--DIHAFKPILNVDEVDDIFDV 521 E +EE+GL+ V L+ + +VPV+ + D+ + +P N++EVD++F++ Sbjct: 85 ETQEELGLEVPKEHVWGVLQPVYDREKATIVPVLANVGPLDLQSLRP--NLEEVDEVFEM 142
>YEAB_KLEAE (P43338) Hypothetical nudix hydrolase yeaB (Fragment)| Length = 120 Score = 50.8 bits (120), Expect = 2e-06 Identities = 34/92 (36%), Positives = 47/92 (51%) Frame = +3 Query: 183 RRAAVLVCLFQDAAGELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREAKEE 362 R+AAVLV + + L LLT+R+ + H+G+VA P ALREA+EE Sbjct: 30 RQAAVLVPIVRRPQPGL--LLTQRSPLMRKHAGQVAFPGGAVDNSDATLIAAALREAQEE 87 Query: 363 IGLDPSLVTVVSSLEHFLSKHLLVVVPVVGIL 458 + + P V V+ L S V PVVGI+ Sbjct: 88 VAIPPESVEVIGVLPPVDSVTGFQVTPVVGII 119
>YDH5_SCHPO (Q92350) Probable nudix hydrolase C6G9.05 (EC 3.6.1.-)| Length = 285 Score = 46.6 bits (109), Expect = 4e-05 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%) Frame = +3 Query: 177 QPRR-AAVLVCLFQDAAGELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREA 353 QP R A+VL+ L + G +LLT+R+ +L +H+G++ P ALRE Sbjct: 112 QPTRFASVLMPLVNTSQGA-SLLLTQRSPNLRSHAGQMCFPGGRVEPSDGSHYYAALRET 170 Query: 354 KEEIGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 EEIG P+ T +++ ++ + + + P L EV D+F VP Sbjct: 171 YEEIGFLPNFFTYLTTFPPLFTRDEKTEIRAY-LAFSVQTSLPSLGTGEVKDLFYVP 226
>NUDT8_HUMAN (Q8WV74) Nucleoside diphosphate-linked moiety X motif 8,| mitochondrial precursor (EC 3.6.1.-) (Nudix motif 8) Length = 236 Score = 45.4 bits (106), Expect = 9e-05 Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 1/117 (0%) Frame = +3 Query: 177 QPRRAAVLVCLFQDAAGELRVLLTKRASSLS-THSGEVALPXXXXXXXXXXXXXTALREA 353 +P AAVLV L G +L T R+S L+ H G+V+ P TALRE Sbjct: 28 RPASAAVLVPLCS-VRGVPALLYTLRSSRLTGRHKGDVSFPGGKCDPADQDVVHTALRET 86 Query: 354 KEEIGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 +EE+GL V L VVPV+ + + N +EVD++F +P Sbjct: 87 REELGLAVPEEHVWGLLRPVYDPQKATVVPVLAGVGPLDPQSLRPNSEEVDEVFALP 143
>LEXA_CLOTE (Q895H6) LexA repressor (EC 3.4.21.88)| Length = 200 Score = 40.4 bits (93), Expect = 0.003 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = +3 Query: 348 EAKEEIGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 E K I DP+ + LEH + K +V +PVVG ++ A KPIL V+ ++D F +P Sbjct: 50 EEKGVIRRDPTKPRAIEVLEHSIMKKEMVDIPVVGTVT---AGKPILAVENIEDTFALP 105
>LEXA_CLOAB (Q97I23) LexA repressor (EC 3.4.21.88)| Length = 204 Score = 34.3 bits (77), Expect = 0.21 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = +3 Query: 348 EAKEEIGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDVP 524 E K I DP+ + ++ +SK ++ +P+VG + A +PIL V+ +DD +P Sbjct: 54 EKKGLIRRDPTKPRAIELIKDPISKREMIDIPIVG---KVQAGQPILAVENIDDYLTIP 109
>SIRT1_MOUSE (Q923E4) NAD-dependent deacetylase sirtuin-1 (EC 3.5.1.-)| (SIR2alpha) (mSIR2a) (Sir2) (SIR2-like protein 1) Length = 737 Score = 31.2 bits (69), Expect = 1.8 Identities = 24/66 (36%), Positives = 32/66 (48%) Frame = +3 Query: 30 SISFQASMEEELGTSIEALIRRLRLHQPPPSPYTGDPSTAATPAAANLFQPRRAAVLVCL 209 S S A+ME + E L +R R P G+PS A PAAA + AA L Sbjct: 14 SPSAAAAMEAASQPADEPLRKRPRRDGPGLGRSPGEPSAAVAPAAAGC-EAASAAAPAAL 72 Query: 210 FQDAAG 227 +++AAG Sbjct: 73 WREAAG 78
>SOX30_MACFA (Q8WNV5) Transcription factor SOX-30| Length = 753 Score = 30.0 bits (66), Expect = 4.0 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%) Frame = +3 Query: 9 PIPPHLR---SISFQASMEEELGTSIEALIRRLRLHQPP-----PSPYTGDPSTAATPAA 164 P PP L S + +S E + + + +RRL +P P P D AA+PA Sbjct: 38 PSPPTLSAAASATLASSCGEAVASGLPPAVRRLLQVKPEQVLLLPQPQARDEEAAASPAQ 97 Query: 165 ANLFQPR 185 A L Q R Sbjct: 98 ARLLQFR 104
>CLCN2_RAT (P35525) Chloride channel protein 2 (ClC-2)| Length = 907 Score = 30.0 bits (66), Expect = 4.0 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = +3 Query: 57 EELGTSIEALIRRLRLHQPPPSPYTGDPSTAATPAAANLFQPRRAAVLVC 206 +ELG + R+RL P P+ G PS ATP Q R A +C Sbjct: 34 QELGAFAKEEAARIRLGGP--EPWKGSPSARATPELLEYGQSRCARCRIC 81
>CLCN2_MOUSE (Q9R0A1) Chloride channel protein 2 (ClC-2)| Length = 908 Score = 30.0 bits (66), Expect = 4.0 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = +3 Query: 57 EELGTSIEALIRRLRLHQPPPSPYTGDPSTAATPAAANLFQPRRAAVLVC 206 +ELG + R+RL P P+ G PS ATP Q R A +C Sbjct: 36 QELGAFAKEEAARIRLGGP--EPWKGSPSARATPELLEYGQSRCARCRIC 83
>NUDH_COLP3 (Q47Y27) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 171 Score = 30.0 bits (66), Expect = 4.0 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 Query: 336 TALREAKEEIGLDPSLVTVVSSLEHFLSKHL 428 T RE EE+GL P V +V+S +H+L L Sbjct: 49 TMYRELHEEVGLKPEHVKIVASTKHWLKYKL 79
>NAC76_ORYSA (Q5Z6B6) NAC domain-containing protein 76 (ONAC076)| Length = 276 Score = 29.6 bits (65), Expect = 5.3 Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 3/74 (4%) Frame = +2 Query: 5 HPHSPTPPIYLLPSFHGGGARHEHRGSHXXXXXXXXXXXXXYRRSFNSGDPSRS*PVSAS 184 H H P PP L HGG A H+H G+ Y F S DPS P S Sbjct: 182 HHHHPFPPAQL----HGGAADHKHDGAGGHHHHHLMQPHHHY-DDFPSFDPSMQLPQLMS 236 Query: 185 ESRRAGLP---LPG 217 + P LPG Sbjct: 237 ADQPPPPPPSLLPG 250
>ARLY_ARCFU (O29379) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 483 Score = 29.3 bits (64), Expect = 6.9 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 9/65 (13%) Frame = +3 Query: 342 LREAKEEIGLDPSLVTVVSSLEH----FLSKHLLVVVPVV-----GILSDIHAFKPILNV 494 LRE++ + G+DP + + SS+EH FL L+ V V+ G LS+ A + IL + Sbjct: 2 LRESRMKKGMDPKALKLSSSIEHDKNIFLYDILVDVAHVLTLKKGGYLSEEEAKEIILAL 61 Query: 495 DEVDD 509 +V D Sbjct: 62 KKVKD 66
>MAOX_POPTR (P34105) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)| Length = 591 Score = 29.3 bits (64), Expect = 6.9 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Frame = +3 Query: 336 TALREAKEEIGLDPSLVTVVSS----LEHFLSKHLLVVVPVVGILSDIHAFKPIL 488 T L E +++I L S +VSS L+HF PV G+L + A KPI+ Sbjct: 360 TPLEETRKKIWLTDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLEVVKAIKPIV 414
>ATI2_HHV11 (P10230) Alpha trans-inducing factor 78 kDa protein| Length = 718 Score = 29.3 bits (64), Expect = 6.9 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +3 Query: 66 GTSIEALIRRLRLHQPPPSPYTGDPSTAATPAAANLFQPRRA 191 GT E + R R ++PPP P P +TPA+ F+ RRA Sbjct: 453 GTCREKIQRARRDNEPPPLP---RPRLHSTPASTRRFRRRRA 491
>YIG7_YEAST (P40514) Hypothetical 75.5 kDa protein in SEC6-RNR3 intergenic| region Length = 678 Score = 29.3 bits (64), Expect = 6.9 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +3 Query: 336 TALREAKEEIGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEV 503 TAL + L P ++ H LS HL PV+ + +I F +LN EV Sbjct: 547 TALLRGEAGASLKPPILDFNDDQNHSLSWHLNATDPVIDQIGNIDGFSLLLNDVEV 602
>HIS8_HALMA (Q5V4K3) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 29.3 bits (64), Expect = 6.9 Identities = 15/60 (25%), Positives = 29/60 (48%) Frame = +3 Query: 342 LREAKEEIGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILSDIHAFKPILNVDEVDDIFDV 521 + E E+GLDP + ++S E+ V + G +H++ + D VD++ D+ Sbjct: 18 IEEVARELGLDPDDMVKLASNENMFGPSPDAVEAIRGSAERMHSYPKASHADLVDELADM 77
>CJ046_HUMAN (Q86Y37) Protein C10orf46| Length = 369 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +3 Query: 36 SFQASMEEELGTSIEALIRRLRLHQPPPSPYTGDPSTAATPAAANL 173 S++A M+++ + EA + R PPP P + P+ A P L Sbjct: 12 SYEAMMDDQNHNNWEAAVDGFRQPLPPPPPPSSIPAPAREPPGGQL 57
>UPPP_PYRAE (Q8ZYX0) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase) Length = 266 Score = 28.9 bits (63), Expect = 9.0 Identities = 13/33 (39%), Positives = 24/33 (72%) Frame = +3 Query: 363 IGLDPSLVTVVSSLEHFLSKHLLVVVPVVGILS 461 IG+ S++T+ + LE SKH+++V V+G+L+ Sbjct: 224 IGIVISIITIKALLEFAKSKHVVLVNVVIGLLA 256
>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) Length = 1200 Score = 28.9 bits (63), Expect = 9.0 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +3 Query: 72 SIEALIRRLRLHQPPPSPYTGDPSTAATPAAANLFQPRRAAVLVCLFQDAAGEL 233 S L+ L+ Q P+P + +P+ AAT AA + P+ ++L L AG L Sbjct: 568 SSNPLLESLKKMQESPAPSSSEPAEAATVAAPS--PPKTPSLLAPLVSPLAGPL 619
>YM2_DHVI1 (Q01480) Hypothetical protein M2 (Fragment)| Length = 141 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +2 Query: 185 ESRRAGLPLPGRCRRAACPPHQARFLPLHPL 277 +++RA +P PGR RRA P Q R L P+ Sbjct: 85 QAQRADVPDPGRSRRATVPIAQERRLEHRPI 115
>ZN335_HUMAN (Q9H4Z2) Zinc finger protein 335| Length = 1342 Score = 28.9 bits (63), Expect = 9.0 Identities = 27/113 (23%), Positives = 35/113 (30%) Frame = +3 Query: 15 PPHLRSISFQASMEEELGTSIEALIRRLRLHQPPPSPYTGDPSTAATPAAANLFQPRRAA 194 PP R F EEL H P P P P A FQ A Sbjct: 716 PPSRRRPFFSLQQIEELKQQ----------HSAAPGPPPSSPGPPEIPPEATTFQSSEAP 765 Query: 195 VLVCLFQDAAGELRVLLTKRASSLSTHSGEVALPXXXXXXXXXXXXXTALREA 353 L+C D G ++ + A + + + AL TAL+ A Sbjct: 766 SLLC--SDTLGGATIIYQQGAEESTAMATQTALDLLLNMSAQRELGGTALQVA 816 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,092,952 Number of Sequences: 219361 Number of extensions: 1332544 Number of successful extensions: 4918 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4606 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4899 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
