ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart17h02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB063117.1| Hordeum vulgare HvAPX1 mRNA for peroxisome type ascorbate peroxidase, complete cds Length = 1089 Score = 101 bits (51), Expect = 1e-19 Identities = 51/51 (100%) Strand = Plus / Plus Query: 1 gatgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 gatgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatg 154
>gb|BT016732.1| Zea mays clone Contig565 mRNA sequence Length = 1248 Score = 77.8 bits (39), Expect = 2e-12 Identities = 42/43 (97%) Strand = Plus / Plus Query: 1 gatgcgcccccatcatgctccgcctcgcatggcatgatgctgg 43 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 222 gatgcgccccgatcatgctccgcctcgcatggcatgatgctgg 264
>gb|AY109419.1| Zea mays CL26634_1 mRNA sequence Length = 1373 Score = 77.8 bits (39), Expect = 2e-12 Identities = 42/43 (97%) Strand = Plus / Minus Query: 1 gatgcgcccccatcatgctccgcctcgcatggcatgatgctgg 43 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1187 gatgcgccccgatcatgctccgcctcgcatggcatgatgctgg 1145
>ref|XM_483666.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1158 Score = 69.9 bits (35), Expect = 5e-10 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1 gatgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||| ||||||||||||||||||||||||||||| || ||||| |||| Sbjct: 192 gatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatg 242
>ref|XM_507324.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B11.9 mRNA Length = 1229 Score = 69.9 bits (35), Expect = 5e-10 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1 gatgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||| ||||||||||||||||||||||||||||| || ||||| |||| Sbjct: 203 gatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatg 253
>dbj|AK104490.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B09, full insert sequence Length = 1158 Score = 69.9 bits (35), Expect = 5e-10 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1 gatgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||| ||||||||||||||||||||||||||||| || ||||| |||| Sbjct: 192 gatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatg 242
>dbj|AK070842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074O14, full insert sequence Length = 1229 Score = 69.9 bits (35), Expect = 5e-10 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1 gatgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||| ||||||||||||||||||||||||||||| || ||||| |||| Sbjct: 203 gatgcgcgcccatcatgctccgcctcgcatggcatgacgcgggcacttatg 253
>gb|AF159254.1|AF159254 Zantedeschia aethiopica ascorbate peroxidase (cmApx) mRNA, complete cds Length = 1167 Score = 65.9 bits (33), Expect = 8e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||| ||| ||||||||||||| |||||||||||||||||||| |||| Sbjct: 139 tgcgctcccgtcatgctccgcctagcatggcatgatgctggcacttatg 187
>gb|DQ078123.1| Rheum australe ascorbate peroxidase mRNA, complete cds Length = 1192 Score = 60.0 bits (30), Expect = 5e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgc 40 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 91 tgcgcccccatcatgctccgcctcgcgtggcacgatgc 128
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 52.0 bits (26), Expect = 1e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 3 tgcgcccccatcatgctccgcctcgc 28 |||||||||||||||||||||||||| Sbjct: 20903513 tgcgcccccatcatgctccgcctcgc 20903488 Score = 38.2 bits (19), Expect = 1.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 29 atggcatgatgctggcacctatg 51 |||||||||||||||||| |||| Sbjct: 20901812 atggcatgatgctggcacatatg 20901790
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 52.0 bits (26), Expect = 1e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 3 tgcgcccccatcatgctccgcctcgc 28 |||||||||||||||||||||||||| Sbjct: 95739 tgcgcccccatcatgctccgcctcgc 95714 Score = 38.2 bits (19), Expect = 1.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 29 atggcatgatgctggcacctatg 51 |||||||||||||||||| |||| Sbjct: 94038 atggcatgatgctggcacatatg 94016
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene region Length = 65993 Score = 48.1 bits (24), Expect = 0.002 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1 gatgcgcccccatcatgctccgcctcgc 28 ||||||| |||||||||||||||||||| Sbjct: 56909 gatgcgcgcccatcatgctccgcctcgc 56882
>emb|Z34934.1|ZMAPXG Z.mays apx gene encoding cytosolic ascorbate peroxidase Length = 1042 Score = 48.1 bits (24), Expect = 0.002 Identities = 30/32 (93%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggca 34 |||||||| |||||||||||||||||||||| Sbjct: 165 tgcgccccgctcatgctccgcctcgcatggca 196
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.002 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1 gatgcgcccccatcatgctccgcctcgc 28 ||||||| |||||||||||||||||||| Sbjct: 27551869 gatgcgcgcccatcatgctccgcctcgc 27551842
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 48.1 bits (24), Expect = 0.002 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1 gatgcgcccccatcatgctccgcctcgc 28 ||||||| |||||||||||||||||||| Sbjct: 34159 gatgcgcgcccatcatgctccgcctcgc 34132
>gb|AY104492.1| Zea mays PCO104002 mRNA sequence Length = 1052 Score = 48.1 bits (24), Expect = 0.002 Identities = 30/32 (93%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggca 34 |||||||| |||||||||||||||||||||| Sbjct: 179 tgcgccccgctcatgctccgcctcgcatggca 210
>ref|NM_119763.2| Arabidopsis thaliana L-ascorbate peroxidase/ peroxidase AT4G35970 mRNA, complete cds Length = 973 Score = 46.1 bits (23), Expect = 0.007 Identities = 38/43 (88%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||| |||||||| || |||||||||||||| || ||||||| Sbjct: 136 cccattatgctccgtcttgcatggcatgatgcaggaacctatg 178
>gb|AF441714.1| Arabidopsis thaliana putative ascorbate peroxidase APX5 (AT4g35970) mRNA, partial cds Length = 784 Score = 46.1 bits (23), Expect = 0.007 Identities = 38/43 (88%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||| |||||||| || |||||||||||||| || ||||||| Sbjct: 38 cccattatgctccgtcttgcatggcatgatgcaggaacctatg 80
>gb|BT006053.1| Arabidopsis thaliana clone U51359 putative ascorbate peroxidase (At4g35970) mRNA, complete cds Length = 871 Score = 46.1 bits (23), Expect = 0.007 Identities = 38/43 (88%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||| |||||||| || |||||||||||||| || ||||||| Sbjct: 91 cccattatgctccgtcttgcatggcatgatgcaggaacctatg 133
>dbj|AK119023.1| Arabidopsis thaliana At4g35970 mRNA for putative ascorbate peroxidase, complete cds, clone: RAFL21-34-M19 Length = 973 Score = 46.1 bits (23), Expect = 0.007 Identities = 38/43 (88%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||| |||||||| || |||||||||||||| || ||||||| Sbjct: 136 cccattatgctccgtcttgcatggcatgatgcaggaacctatg 178
>ref|XM_479627.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 44.1 bits (22), Expect = 0.028 Identities = 40/46 (86%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 48 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>ref|XM_506596.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E10.12 mRNA Length = 1392 Score = 44.1 bits (22), Expect = 0.028 Identities = 40/46 (86%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 48 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 169 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 214
>emb|X78452.1|RSAPX R.sativus (Fakir) APX mRNA for L-ascorbate peroxidase Length = 753 Score = 44.1 bits (22), Expect = 0.028 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||||||||||||||| Sbjct: 100 cccatcatggtccgcctcgcatggca 125
>dbj|AB053297.1| Oryza sativa (japonica cultivar-group) APXb mRNA for L-ascorbate peroxidase, complete cds Length = 1160 Score = 44.1 bits (22), Expect = 0.028 Identities = 40/46 (86%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 48 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 160 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 205
>dbj|AK122175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148L03, full insert sequence Length = 2982 Score = 44.1 bits (22), Expect = 0.028 Identities = 40/46 (86%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 48 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 170 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 215
>dbj|AK102751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K23, full insert sequence Length = 2215 Score = 44.1 bits (22), Expect = 0.028 Identities = 40/46 (86%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 48 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>dbj|AK068430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156P11, full insert sequence Length = 1393 Score = 44.1 bits (22), Expect = 0.028 Identities = 40/46 (86%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 48 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 169 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 214
>dbj|AK061715.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H06, full insert sequence Length = 1110 Score = 44.1 bits (22), Expect = 0.028 Identities = 40/46 (86%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 48 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>dbj|AB050724.1| Oryza sativa (japonica cultivar-group) APXb mRNA for ascorbate peroxidase, complete cds Length = 1058 Score = 44.1 bits (22), Expect = 0.028 Identities = 40/46 (86%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 48 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 155 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 200
>emb|AJ843990.1| Plantago major mRNA for ascorbate peroxidase (apx1 gene) Length = 1100 Score = 42.1 bits (21), Expect = 0.11 Identities = 27/29 (93%) Strand = Plus / Plus Query: 15 atgctccgcctcgcatggcatgatgctgg 43 |||||||| ||||| |||||||||||||| Sbjct: 166 atgctccgtctcgcctggcatgatgctgg 194
>dbj|AB125635.1| Brassica oleracea BO-sAPX mRNA for stromal ascorbate peroxidase, complete cds Length = 1430 Score = 42.1 bits (21), Expect = 0.11 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 atggcatgatgctggcaccta 49 ||||||||||||||||||||| Sbjct: 424 atggcatgatgctggcaccta 444
>gb|AF139190.1|AF139190 Mesembryanthemum crystallinum cytosolic ascorbate peroxidase mRNA, complete cds Length = 1238 Score = 42.1 bits (21), Expect = 0.11 Identities = 36/41 (87%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctgg 43 ||||| || ||||||||||||||||| ||||| || ||||| Sbjct: 201 tgcgctcctatcatgctccgcctcgcgtggcacgacgctgg 241
>gb|AY382617.1| Oryza sativa (indica cultivar-group) putative peroxisome-bound ascorbate peroxidase (APx3) mRNA, complete cds Length = 1060 Score = 40.1 bits (20), Expect = 0.44 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggca 34 ||||| ||||||||||||||||| || ||||| Sbjct: 130 tgcgctcccatcatgctccgcctggcgtggca 161
>ref|NM_119666.2| Arabidopsis thaliana APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase AT4G35000 (APX3) mRNA, complete cds Length = 1213 Score = 40.1 bits (20), Expect = 0.44 Identities = 35/40 (87%) Strand = Plus / Plus Query: 12 atcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||||||| | |||||||| |||||||| ||||||| Sbjct: 261 atcatgctccgattggcatggcacgatgctggaacctatg 300
>ref|XM_474945.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 876 Score = 40.1 bits (20), Expect = 0.44 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggca 34 ||||| ||||||||||||||||| || ||||| Sbjct: 91 tgcgctcccatcatgctccgcctggcgtggca 122
>ref|XM_470658.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 40.1 bits (20), Expect = 0.44 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggca 34 |||||||| |||||||||||||||| ||||| Sbjct: 94 tgcgcccctctcatgctccgcctcgcgtggca 125
>gb|BT016458.1| Zea mays clone Contig291 mRNA sequence Length = 1269 Score = 40.1 bits (20), Expect = 0.44 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggca 34 ||||| ||| |||||||||||||||| ||||| Sbjct: 185 tgcgcgcccctcatgctccgcctcgcgtggca 216
>emb|X98276.1|ATAPEXT A.thaliana mRNA for ascorbate peroxidase, extraplastidal (membrane bound) (APX3) Length = 1045 Score = 40.1 bits (20), Expect = 0.44 Identities = 35/40 (87%) Strand = Plus / Plus Query: 12 atcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||||||| | |||||||| |||||||| ||||||| Sbjct: 103 atcatgctccgattggcatggcacgatgctggaacctatg 142
>emb|X98003.1|ATAPX A.thaliana mRNA for ascorbate peroxidase Length = 1127 Score = 40.1 bits (20), Expect = 0.44 Identities = 35/40 (87%) Strand = Plus / Plus Query: 12 atcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||||||| | |||||||| |||||||| ||||||| Sbjct: 167 atcatgctccgattggcatggcacgatgctggaacctatg 206
>gb|AY081646.1| Arabidopsis thaliana L-ascorbate peroxidase (At4g35000) mRNA, complete cds Length = 1030 Score = 40.1 bits (20), Expect = 0.44 Identities = 35/40 (87%) Strand = Plus / Plus Query: 12 atcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||||||| | |||||||| |||||||| ||||||| Sbjct: 97 atcatgctccgattggcatggcacgatgctggaacctatg 136
>gb|AY065143.1| Arabidopsis thaliana L-ascorbate peroxidase (At4g35000; M4E13.60) mRNA, complete cds Length = 1121 Score = 40.1 bits (20), Expect = 0.44 Identities = 35/40 (87%) Strand = Plus / Plus Query: 12 atcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||||||| | |||||||| |||||||| ||||||| Sbjct: 185 atcatgctccgattggcatggcacgatgctggaacctatg 224
>gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA, complete cds Length = 1138 Score = 40.1 bits (20), Expect = 0.44 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggca 34 ||||| ||| |||||||||||||||| ||||| Sbjct: 174 tgcgcgcccctcatgctccgcctcgcgtggca 205
>gb|AY254495.1| Oryza sativa (indica cultivar-group) ascorbate peroxidase mRNA, complete cds Length = 806 Score = 40.1 bits (20), Expect = 0.44 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggca 34 |||||||| |||||||||||||||| ||||| Sbjct: 107 tgcgcccctctcatgctccgcctcgcgtggca 138
>emb|BX828485.1|CNS0A4AX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH94ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2260 Score = 40.1 bits (20), Expect = 0.44 Identities = 35/40 (87%) Strand = Plus / Plus Query: 12 atcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||||||| | |||||||| |||||||| ||||||| Sbjct: 159 atcatgctccgattggcatggcacgatgctggaacctatg 198
>gb|AY086162.1| Arabidopsis thaliana clone 21896 mRNA, complete sequence Length = 1160 Score = 40.1 bits (20), Expect = 0.44 Identities = 35/40 (87%) Strand = Plus / Plus Query: 12 atcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||||||| | |||||||| |||||||| ||||||| Sbjct: 211 atcatgctccgattggcatggcacgatgctggaacctatg 250
>dbj|AK061841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E04, full insert sequence Length = 1070 Score = 40.1 bits (20), Expect = 0.44 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggca 34 |||||||| |||||||||||||||| ||||| Sbjct: 159 tgcgcccctctcatgctccgcctcgcgtggca 190
>gb|U69138.1|ATU69138 Arabidopsis thaliana ascorbate peroxidase 3 (APX3) mRNA, complete cds Length = 1177 Score = 40.1 bits (20), Expect = 0.44 Identities = 35/40 (87%) Strand = Plus / Plus Query: 12 atcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||||||| | |||||||| |||||||| ||||||| Sbjct: 223 atcatgctccgattggcatggcacgatgctggaacctatg 262
>dbj|D45423.1| Rice mRNA for ascorbate peroxidase, complete cds Length = 983 Score = 40.1 bits (20), Expect = 0.44 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggca 34 |||||||| |||||||||||||||| ||||| Sbjct: 133 tgcgcccctctcatgctccgcctcgcgtggca 164
>dbj|AB077953.1| Euglena gracilis apx mRNA for ascorbate peroxidase, partial cds Length = 1326 Score = 40.1 bits (20), Expect = 0.44 Identities = 38/44 (86%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcac 46 |||||||||||| || ||||||| || ||||| || |||||||| Sbjct: 157 tgcgcccccatcctgatccgcctggcgtggcacgacgctggcac 200
>gb|AF540556.1| Brassica juncea clone APX 8A ascorbate peroxidase mRNA, complete cds Length = 987 Score = 38.2 bits (19), Expect = 1.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 12 atcatgctccgcctcgcatggca 34 |||||| |||||||||||||||| Sbjct: 172 atcatggtccgcctcgcatggca 194
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21, complete sequence Length = 130433 Score = 38.2 bits (19), Expect = 1.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 tgcgcccccatcatgctccgcct 25 ||||| ||||||||||||||||| Sbjct: 11106 tgcgctcccatcatgctccgcct 11084
>gb|AF039953.1|AF039953 Fragaria x ananassa cytosolic ascorbate peroxidase (ApxSC) mRNA, complete cds Length = 1040 Score = 38.2 bits (19), Expect = 1.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggcatgatgctggcacctatg 51 |||||||||| ||||||||||| |||||| ||||||| Sbjct: 175 tcatgctccgtctcgcatggcactctgctggaacctatg 213
>gb|AF159633.1|AF159633 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX26 allele, complete cds Length = 1035 Score = 38.2 bits (19), Expect = 1.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggcatgatgctggcacctatg 51 |||||||||| ||||||||||| |||||| ||||||| Sbjct: 163 tcatgctccgtctcgcatggcactctgctggaacctatg 201
>gb|AF159632.1|AF159632 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX22 allele, complete cds Length = 1065 Score = 38.2 bits (19), Expect = 1.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggcatgatgctggcacctatg 51 |||||||||| ||||||||||| |||||| ||||||| Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatg 214
>gb|AF159631.1|AF159631 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX19 allele, complete cds Length = 1051 Score = 38.2 bits (19), Expect = 1.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggcatgatgctggcacctatg 51 |||||||||| ||||||||||| |||||| ||||||| Sbjct: 163 tcatgctccgtctcgcatggcactctgctggaacctatg 201
>gb|AF159630.1|AF159630 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX42 allele, complete cds Length = 1035 Score = 38.2 bits (19), Expect = 1.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggcatgatgctggcacctatg 51 |||||||||| ||||||||||| |||||| ||||||| Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatg 214
>gb|AF159629.1|AF159629 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX27 allele, complete cds Length = 1030 Score = 38.2 bits (19), Expect = 1.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggcatgatgctggcacctatg 51 |||||||||| ||||||||||| |||||| ||||||| Sbjct: 171 tcatgctccgtctcgcatggcactctgctggaacctatg 209
>gb|AF159628.1|AF159628 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX44 allele, complete cds Length = 1040 Score = 38.2 bits (19), Expect = 1.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggcatgatgctggcacctatg 51 |||||||||| ||||||||||| |||||| ||||||| Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatg 214
>gb|AF159627.1|AF159627 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX18 allele, complete cds Length = 1012 Score = 38.2 bits (19), Expect = 1.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggcatgatgctggcacctatg 51 |||||||||| ||||||||||| |||||| ||||||| Sbjct: 148 tcatgctccgtctcgcatggcactctgctggaacctatg 186
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 1.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 tgcgcccccatcatgctccgcct 25 ||||| ||||||||||||||||| Sbjct: 8200593 tgcgctcccatcatgctccgcct 8200571
>gb|AF022213.1|AF022213 Fragaria x ananassa cytosolic ascorbate peroxidase (APX-c) mRNA, complete cds Length = 1044 Score = 38.2 bits (19), Expect = 1.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggcatgatgctggcacctatg 51 |||||||||| ||||||||||| |||||| ||||||| Sbjct: 167 tcatgctccgtctcgcatggcactctgctggaacctatg 205
>gb|AF079512.1|AF079512 Mesembryanthemum crystallinum clone R6-R11 ascorbate peroxidase mRNA, complete cds Length = 1022 Score = 38.2 bits (19), Expect = 1.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggcatgatgctggcacctatg 51 ||||||| |||||| ||| ||||||||||| ||||||| Sbjct: 146 tcatgcttcgcctctcattccatgatgctggtacctatg 184
>emb|AL929348.9| Mouse DNA sequence from clone RP24-357K4 on chromosome 2, complete sequence Length = 114911 Score = 38.2 bits (19), Expect = 1.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 gcatggcatgatgctggca 45 ||||||||||||||||||| Sbjct: 76120 gcatggcatgatgctggca 76102
>ref|NM_179276.1| Arabidopsis thaliana APX1; L-ascorbate peroxidase AT1G07890 (APX1) transcript variant AT1G07890.2 mRNA, complete cds Length = 999 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 126 cccatcatggtccgactcgcatggca 151
>ref|NM_202057.1| Arabidopsis thaliana APX1; L-ascorbate peroxidase AT1G07890 (APX1) transcript variant AT1G07890.3 mRNA, complete cds Length = 1012 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 139 cccatcatggtccgactcgcatggca 164
>ref|NM_100663.2| Arabidopsis thaliana APX1; L-ascorbate peroxidase AT1G07890 (APX1) transcript variant AT1G07890.1 mRNA, complete cds Length = 1116 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 243 cccatcatggtccgactcgcatggca 268
>ref|NM_001035915.1| Arabidopsis thaliana APX1; L-ascorbate peroxidase AT1G07890 (APX1) transcript variant AT1G07890.5 mRNA, complete cds Length = 1291 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 338 cccatcatggtccgactcgcatggca 363
>ref|NM_001035914.1| Arabidopsis thaliana APX1; L-ascorbate peroxidase AT1G07890 (APX1) transcript variant AT1G07890.4 mRNA, complete cds Length = 1294 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 338 cccatcatggtccgactcgcatggca 363
>gb|AY789051.1| Populus tomentosa ascorbate peroxidase mRNA, complete cds Length = 969 Score = 36.2 bits (18), Expect = 6.9 Identities = 33/38 (86%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgcatggcatgatgc 40 ||||| || |||||||||||| | || ||||||||||| Sbjct: 104 tgcgctcctatcatgctccgcttagcgtggcatgatgc 141
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgc 28 |||||||| |||||||||||||||| Sbjct: 9815482 tgcgcccctctcatgctccgcctcgc 9815507
>emb|X59600.1|ATASCOR A.thaliana mRNA for ascorbate peroxidase Length = 1023 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 139 cccatcatggtccgactcgcatggca 164
>emb|AJ006358.1|HVU6 Hordeum vulgare mRNA for ascorbate peroxidase Length = 1050 Score = 36.2 bits (18), Expect = 6.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggca 34 |||||||||||||||| ||||| Sbjct: 177 tcatgctccgcctcgcgtggca 198
>emb|AJ000223.1|HVJ000223 Hordeum vulgare mRNA for expressed sequence tag Length = 550 Score = 36.2 bits (18), Expect = 6.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 13 tcatgctccgcctcgcatggca 34 |||||||||||||||| ||||| Sbjct: 177 tcatgctccgcctcgcgtggca 198
>gb|AY094002.1| Arabidopsis thaliana At1g07890/F24B9_2 mRNA, complete cds Length = 753 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 100 cccatcatggtccgactcgcatggca 125
>gb|AY056395.1| Arabidopsis thaliana At1g07890/F24B9_2 mRNA, complete cds Length = 1060 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 190 cccatcatggtccgactcgcatggca 215
>gb|AY039879.1| Arabidopsis thaliana At1g07890/F24B9_2 mRNA, complete cds Length = 1059 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 190 cccatcatggtccgactcgcatggca 215
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Minus Query: 3 tgcgcccccatcatgctccgcctcgc 28 |||||||| |||||||||||||||| Sbjct: 29532553 tgcgccccactcatgctccgcctcgc 29532528
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 3 tgcgcccccatcatgctccgcctcgc 28 |||||||| |||||||||||||||| Sbjct: 9813603 tgcgcccctctcatgctccgcctcgc 9813628
>emb|BX816429.1|CNS0ABNP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1032 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 167 cccatcatggtccgactcgcatggca 192
>emb|BX815448.1|CNS0AE8X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 929 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 58 cccatcatggtccgactcgcatggca 83
>emb|BX813944.1|CNS0AEB8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1009 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 138 cccatcatggtccgactcgcatggca 163
>emb|BX815850.1|CNS0ABNN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 907 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 34 cccatcatggtccgactcgcatggca 59
>emb|BX813948.1|CNS0ACBX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1045 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 174 cccatcatggtccgactcgcatggca 199
>emb|BX815873.1|CNS0ABWS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZC09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1009 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 177 cccatcatggtccgactcgcatggca 202
>emb|BX814227.1|CNS0AC1P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 998 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 166 cccatcatggtccgactcgcatggca 191
>emb|BX817157.1|CNS0ABKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZD10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1033 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 173 cccatcatggtccgactcgcatggca 198
>emb|BX816810.1|CNS0ABP3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH69ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 972 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 166 cccatcatggtccgactcgcatggca 191
>emb|BX815009.1|CNS0ABC3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS23ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1023 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 166 cccatcatggtccgactcgcatggca 191
>emb|BX841772.1|CNS09Y65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 114 cccatcatggtccgactcgcatggca 139
>gb|AY086425.1| Arabidopsis thaliana clone 25057 mRNA, complete sequence Length = 1112 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 9 cccatcatgctccgcctcgcatggca 34 ||||||||| |||| ||||||||||| Sbjct: 243 cccatcatggtccgactcgcatggca 268
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Minus Query: 3 tgcgcccccatcatgctccgcctcgc 28 |||||||| |||||||||||||||| Sbjct: 59015 tgcgcccctctcatgctccgcctcgc 58990
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0627E10 Length = 163388 Score = 36.2 bits (18), Expect = 6.9 Identities = 24/26 (92%) Strand = Plus / Minus Query: 3 tgcgcccccatcatgctccgcctcgc 28 |||||||| |||||||||||||||| Sbjct: 59225 tgcgccccactcatgctccgcctcgc 59200
>emb|X14921.1|XLIMVJ4 Xenopus laevis mRNA fragment for IgM VH-region (J4) Length = 386 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 29 atggcatgatgctggcac 46 |||||||||||||||||| Sbjct: 184 atggcatgatgctggcac 201
>gb|AC124095.7| Mus musculus chromosome 1, clone RP23-245G9, complete sequence Length = 198825 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 32 gcatgatgctggcaccta 49 |||||||||||||||||| Sbjct: 155127 gcatgatgctggcaccta 155144 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 278,110 Number of Sequences: 3902068 Number of extensions: 278110 Number of successful extensions: 70257 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70022 Number of HSP's gapped (non-prelim): 235 length of query: 51 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 31 effective length of database: 17,155,003,908 effective search space: 531805121148 effective search space used: 531805121148 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
