ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart17h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF542188.1| Triticum aestivum cyc07 mRNA, complete cds 436 e-119
2gb|AY290725.1| Triticum aestivum ribosomal protein S3a-like mRNA... 416 e-113
3dbj|D26060.1|RICT151 Oryza sativa mRNA for cyc07, complete cds 184 9e-44
4dbj|AK104699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 9e-44
5dbj|AK104243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 9e-44
6dbj|AK071037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 9e-44
7dbj|AK069251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 9e-44
8ref|XM_464995.1| Oryza sativa (japonica cultivar-group), mRNA 151 1e-33
9ref|XM_506775.1| PREDICTED Oryza sativa (japonica cultivar-group... 151 1e-33
10dbj|AK099131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 1e-33
11dbj|AK059647.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 1e-33
12gb|AF052503.1|AF052503 Oryza sativa S-phase-specific ribosomal p... 143 3e-31
13gb|AY849388.1| Vitis vinifera cultivar Riesling cyc07 mRNA, part... 131 1e-27
14gb|BT016390.1| Zea mays clone Contig223 mRNA sequence 125 7e-26
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 121 1e-24
16gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare... 121 1e-24
17gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare str... 121 1e-24
18dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 121 1e-24
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 1e-24
20gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 121 1e-24
21emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 121 1e-24
22gb|DQ164221.1| Nicotiana tabacum cyc07 mRNA, complete cds 96 7e-17
23ref|NM_119633.2| Arabidopsis thaliana structural constituent of ... 94 3e-16
24gb|BT000122.1| Arabidopsis thaliana Putative S-phase-specific ri... 94 3e-16
25gb|AY062500.1| Arabidopsis thaliana Putative S-phase-specific ri... 94 3e-16
26emb|BX826401.1|CNS0A38P Arabidopsis thaliana Full-length cDNA Co... 94 3e-16
27emb|BX828268.1|CNS0A2YE Arabidopsis thaliana Full-length cDNA Co... 94 3e-16
28emb|AJ001342.1|ATCYC07 Arabidopsis thaliana mRNA for S-phase-spe... 94 3e-16
29gb|DQ268835.1| Solanum tuberosum clone 115A11 cyc07-like protein... 88 2e-14
30gb|DQ252490.1| Solanum tuberosum clone 059D09 cyc07-like mRNA, c... 88 2e-14
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 6e-14
32dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic D... 86 6e-14
33dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic D... 86 6e-14
34emb|Z25769.1|BRSPSG B.rapa mRNA for S phase specific gene 86 6e-14
35gb|DQ241862.1| Solanum tuberosum clone 027B03 40S ribosomal prot... 86 6e-14
36gb|L23553.1|BRRSPSK Brassica rapa S-phase-specific (BIS289) mRNA... 86 6e-14
37gb|DQ445133.1| Striga asiatica isolate St513 S phase protein mRN... 82 1e-12
38gb|AF093109.1| Tortula ruralis ribosomal protein S3 (rps3) mRNA,... 78 2e-11
39dbj|AB029635.1| Daucus carota mRNA for cyc07, complete cds 74 2e-10
40gb|AY109383.1| Zea mays CL7224_1 mRNA sequence 72 1e-09
41emb|AJ515028.1|CAR515028 Cicer arietinum mRNA for ribosomal prot... 70 4e-09
42emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, ... 66 6e-08
43emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, ... 66 6e-08
44emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BA... 66 6e-08
45gb|DQ268856.1| Solanum tuberosum clone 174A02 cyc07-like protein... 62 9e-07
46gb|DQ268849.1| Solanum tuberosum clone 155F06 cyc07-like protein... 62 9e-07
47gb|DQ252485.1| Solanum tuberosum clone 048H05 cyc07-like mRNA, c... 62 9e-07
48gb|DQ268842.1| Solanum tuberosum clone 135C12 40S ribosomal prot... 60 4e-06
49ref|XM_774945.1| PREDICTED: Strongylocentrotus purpuratus simila... 58 1e-05
50ref|XM_796644.1| PREDICTED: Strongylocentrotus purpuratus simila... 58 1e-05
51ref|XM_785062.1| PREDICTED: Strongylocentrotus purpuratus simila... 58 1e-05
52gb|BT012853.1| Lycopersicon esculentum clone 113933F, mRNA sequence 52 9e-04
53emb|X68555.1|ACKRPA A.californica KRP-A gene 44 0.22
54gb|L31645.1|HNNSPSP Helianthus annuus ribosomal protein S3a mRNA... 44 0.22
55ref|NM_111356.3| Arabidopsis thaliana structural constituent of ... 42 0.85
56gb|AY596294.1| Haloarcula marismortui ATCC 43049 plasmid pNG500,... 42 0.85
57gb|AY081585.1| Arabidopsis thaliana putative 40S ribosomal prote... 42 0.85
58gb|AY062796.1| Arabidopsis thaliana putative 40S ribosomal prote... 42 0.85
59gb|AF379639.1|AF379639 Heliothis virescens ribosomal protein S3a... 42 0.85
60emb|BX824488.1|CNS0A5KP Arabidopsis thaliana Full-length cDNA Co... 42 0.85
61gb|AF429977.1| Spodoptera frugiperda ribosomal protein S3A mRNA,... 42 0.85
62gb|AY085787.1| Arabidopsis thaliana clone 18185 mRNA, complete s... 42 0.85
63gb|AC119954.12| Mus musculus chromosome 1, clone RP24-450P2, com... 40 3.4
64gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, com... 40 3.4
65ref|XM_754891.1| Ustilago maydis 521 hypothetical protein (UM038... 40 3.4
66gb|AC104783.3| Homo sapiens BAC clone RP11-36G9 from 4, complete... 40 3.4
67dbj|AB092486.1| Gallus gallus gene for iron-responsive element-b... 40 3.4 
>gb|AF542188.1| Triticum aestivum cyc07 mRNA, complete cds
          Length = 820

 Score =  436 bits (220), Expect = e-119
 Identities = 250/260 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagcagtggtatgtcatcaaggcgccgctgctcttcaccagccgcaacgacggcaagacc 60
           ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 145 aagcagtggtatgacatcaaggcgccgctgctgttcaccagccgcaacgtcggcaagacc 204

                                                                       
Query: 61  ctcgtgtccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagttt 120
           |||||||||||||| ||||| |||||||||||||||||||| ||||||||| ||| ||| 
Sbjct: 205 ctcgtgtccaggacgcagggtaccaagattgcctcagagggtctgaagcacagggtgttc 264

                                                                       
Query: 121 gaagtatctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaagtatctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactc 324

                                                                       
Query: 181 cgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 cgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggacttcacc 384

                               
Query: 241 actgacaagctcaggtctct 260
           ||||||||||||||||||||
Sbjct: 385 actgacaagctcaggtctct 404
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>gb|AY290725.1| Triticum aestivum ribosomal protein S3a-like mRNA, partial sequence
          Length = 885

 Score =  416 bits (210), Expect = e-113
 Identities = 247/260 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagcagtggtatgtcatcaaggcgccgctgctcttcaccagccgcaacgacggcaagacc 60
           ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 147 aagcagtggtatgacatcaaggcgccgctgctgttcaccagccgcaacgtcggcaagacc 206

                                                                       
Query: 61  ctcgtgtccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagttt 120
           |||||||||||||| ||||| |||||||||| ||||||||| |||||||||  || ||| 
Sbjct: 207 ctcgtgtccaggacgcagggtaccaagattgnctcagagggtctgaagcacanggtgttc 266

                                                                       
Query: 121 gaagtatctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaagtatctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactc 326

                                                                       
Query: 181 cgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 327 cgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggacttcacc 386

                               
Query: 241 actgacaagctcaggtctct 260
           ||||||||||||| ||||||
Sbjct: 387 actgacaagctcaagtctct 406
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>dbj|D26060.1|RICT151 Oryza sativa mRNA for cyc07, complete cds
          Length = 1065

 Score =  184 bits (93), Expect = 9e-44
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 51  cggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctgaagca 110
           |||||||||||||||||||||||||||||| || |||||||| || |||||||| |||||
Sbjct: 224 cggcaagaccctcgtgtccaggacacagggtacaaagattgcttctgagggcctaaagca 283

                                                                       
Query: 111 ccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctacaggaa 170
             | | |||||| || ||  |||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 284 tagagtgtttgaggtctccttagctgatctccagaacgatgaggatcaggcgtacaggaa 343

                                                                       
Query: 171 gatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcat 230
           ||||||||| |||||||||||||||||||||| ||| || ||||| ||||| ||||||||
Sbjct: 344 gatcagacttcgtgctgaggatgtgcaagggaagaacgtgctcaccaacttttggggcat 403

            
Query: 231 g 231
           |
Sbjct: 404 g 404
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>dbj|AK104699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C03, full
           insert sequence
          Length = 942

 Score =  184 bits (93), Expect = 9e-44
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 51  cggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctgaagca 110
           |||||||||||||||||||||||||||||| || |||||||| || |||||||| |||||
Sbjct: 110 cggcaagaccctcgtgtccaggacacagggtacaaagattgcttctgagggcctaaagca 169

                                                                       
Query: 111 ccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctacaggaa 170
             | | |||||| || ||  |||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 170 tagagtgtttgaggtctccttagctgatctccagaacgatgaggatcaggcgtacaggaa 229

                                                                       
Query: 171 gatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcat 230
           ||||||||| |||||||||||||||||||||| ||| || ||||| ||||| ||||||||
Sbjct: 230 gatcagacttcgtgctgaggatgtgcaagggaagaacgtgctcaccaacttttggggcat 289

            
Query: 231 g 231
           |
Sbjct: 290 g 290
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>dbj|AK104243.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D02, full
           insert sequence
          Length = 1032

 Score =  184 bits (93), Expect = 9e-44
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 51  cggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctgaagca 110
           |||||||||||||||||||||||||||||| || |||||||| || |||||||| |||||
Sbjct: 200 cggcaagaccctcgtgtccaggacacagggtacaaagattgcttctgagggcctaaagca 259

                                                                       
Query: 111 ccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctacaggaa 170
             | | |||||| || ||  |||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 260 tagagtgtttgaggtctccttagctgatctccagaacgatgaggatcaggcgtacaggaa 319

                                                                       
Query: 171 gatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcat 230
           ||||||||| |||||||||||||||||||||| ||| || ||||| ||||| ||||||||
Sbjct: 320 gatcagacttcgtgctgaggatgtgcaagggaagaacgtgctcaccaacttttggggcat 379

            
Query: 231 g 231
           |
Sbjct: 380 g 380
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>dbj|AK071037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079A13, full
           insert sequence
          Length = 1118

 Score =  184 bits (93), Expect = 9e-44
 Identities = 180/209 (86%)
 Strand = Plus / Plus

                                                                       
Query: 46  aacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctg 105
           |||| ||| ||||| |||||||||||||||||||| || |||||||| ||||||||||| 
Sbjct: 227 aacgtcgggaagacgctcgtgtccaggacacagggcacaaagattgcttcagagggcctc 286

                                                                       
Query: 106 aagcaccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctac 165
           |||||||| | |||||| || ||  | ||||||||||||||||||||||| ||||| |||
Sbjct: 287 aagcaccgtgtgtttgaggtctccttggctgatcttcagaacgatgaggatcaggcgtac 346

                                                                       
Query: 166 aggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctgg 225
            | ||||||||||| ||||| ||||||||||| ||||  ||||| || ||||||||||||
Sbjct: 347 cgtaagatcagactacgtgccgaggatgtgcaggggaaaaatgttcttacaaacttctgg 406

                                        
Query: 226 ggcatggatttcaccactgacaagctcag 254
           ||||||  |||||| || |||||||||||
Sbjct: 407 ggcatgagtttcacgaccgacaagctcag 435
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>dbj|AK069251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013H23, full
           insert sequence
          Length = 1097

 Score =  184 bits (93), Expect = 9e-44
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 51  cggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctgaagca 110
           |||||||||||||||||||||||||||||| || |||||||| || |||||||| |||||
Sbjct: 201 cggcaagaccctcgtgtccaggacacagggtacaaagattgcttctgagggcctaaagca 260

                                                                       
Query: 111 ccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctacaggaa 170
             | | |||||| || ||  |||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 261 tagagtgtttgaggtctccttagctgatctccagaacgatgaggatcaggcgtacaggaa 320

                                                                       
Query: 171 gatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcat 230
           ||||||||| |||||||||||||||||||||| ||| || ||||| ||||| ||||||||
Sbjct: 321 gatcagacttcgtgctgaggatgtgcaagggaagaacgtgctcaccaacttttggggcat 380

            
Query: 231 g 231
           |
Sbjct: 381 g 381
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>ref|XM_464995.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1063

 Score =  151 bits (76), Expect = 1e-33
 Identities = 181/216 (83%)
 Strand = Plus / Plus

                                                                       
Query: 42  ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagaggg 101
           |||||||  ||||||||||||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 155 ccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgaggg 214

                                                                       
Query: 102 cctgaagcaccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggc 161
            || ||||| || |  |||||||| ||  | || ||||||||||| || ||||| |||||
Sbjct: 215 tctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggatcaggc 274

                                                                       
Query: 162 ctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaactt 221
            ||||||||| | ||||| |||||||||||||| || |||| |||||||||||| || ||
Sbjct: 275 ttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaattt 334

                                               
Query: 222 ctggggcatggatttcaccactgacaagctcaggtc 257
           ||||||||||  ||| ||||| ||||| || |||||
Sbjct: 335 ctggggcatgagttttaccacggacaaacttaggtc 370
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>ref|XM_506775.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1115_D03.49
           mRNA
          Length = 1171

 Score =  151 bits (76), Expect = 1e-33
 Identities = 181/216 (83%)
 Strand = Plus / Plus

                                                                       
Query: 42  ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagaggg 101
           |||||||  ||||||||||||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 191 ccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgaggg 250

                                                                       
Query: 102 cctgaagcaccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggc 161
            || ||||| || |  |||||||| ||  | || ||||||||||| || ||||| |||||
Sbjct: 251 tctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggatcaggc 310

                                                                       
Query: 162 ctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaactt 221
            ||||||||| | ||||| |||||||||||||| || |||| |||||||||||| || ||
Sbjct: 311 ttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaattt 370

                                               
Query: 222 ctggggcatggatttcaccactgacaagctcaggtc 257
           ||||||||||  ||| ||||| ||||| || |||||
Sbjct: 371 ctggggcatgagttttaccacggacaaacttaggtc 406
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>dbj|AK099131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M05, full
           insert sequence
          Length = 1063

 Score =  151 bits (76), Expect = 1e-33
 Identities = 181/216 (83%)
 Strand = Plus / Plus

                                                                       
Query: 42  ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagaggg 101
           |||||||  ||||||||||||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 155 ccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgaggg 214

                                                                       
Query: 102 cctgaagcaccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggc 161
            || ||||| || |  |||||||| ||  | || ||||||||||| || ||||| |||||
Sbjct: 215 tctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggatcaggc 274

                                                                       
Query: 162 ctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaactt 221
            ||||||||| | ||||| |||||||||||||| || |||| |||||||||||| || ||
Sbjct: 275 ttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaattt 334

                                               
Query: 222 ctggggcatggatttcaccactgacaagctcaggtc 257
           ||||||||||  ||| ||||| ||||| || |||||
Sbjct: 335 ctggggcatgagttttaccacggacaaacttaggtc 370
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>dbj|AK059647.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C03, full
           insert sequence
          Length = 1171

 Score =  151 bits (76), Expect = 1e-33
 Identities = 181/216 (83%)
 Strand = Plus / Plus

                                                                       
Query: 42  ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagaggg 101
           |||||||  ||||||||||||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 191 ccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgaggg 250

                                                                       
Query: 102 cctgaagcaccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggc 161
            || ||||| || |  |||||||| ||  | || ||||||||||| || ||||| |||||
Sbjct: 251 tctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggatcaggc 310

                                                                       
Query: 162 ctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaactt 221
            ||||||||| | ||||| |||||||||||||| || |||| |||||||||||| || ||
Sbjct: 311 ttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaattt 370

                                               
Query: 222 ctggggcatggatttcaccactgacaagctcaggtc 257
           ||||||||||  ||| ||||| ||||| || |||||
Sbjct: 371 ctggggcatgagttttaccacggacaaacttaggtc 406
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>gb|AF052503.1|AF052503 Oryza sativa S-phase-specific ribosomal protein (RSPSP94) mRNA,
           complete cds
          Length = 1027

 Score =  143 bits (72), Expect = 3e-31
 Identities = 180/216 (83%)
 Strand = Plus / Plus

                                                                       
Query: 42  ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagaggg 101
           |||||||  ||||||||||||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 152 ccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgaggg 211

                                                                       
Query: 102 cctgaagcaccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggc 161
            || ||||| || |  |||||||| ||  | || ||||||| ||| || ||||| |||||
Sbjct: 212 tctcaagcatcgtgtctttgaagtctccttggcggatcttcggaatgacgaggatcaggc 271

                                                                       
Query: 162 ctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaactt 221
            ||||||||| | ||||| |||||||||||||| || |||| |||||||||||| || ||
Sbjct: 272 ttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaattt 331

                                               
Query: 222 ctggggcatggatttcaccactgacaagctcaggtc 257
           ||||||||||  ||| ||||| ||||| || |||||
Sbjct: 332 ctggggcatgagttttaccacggacaaacttaggtc 367
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>gb|AY849388.1| Vitis vinifera cultivar Riesling cyc07 mRNA, partial cds
          Length = 879

 Score =  131 bits (66), Expect = 1e-27
 Identities = 111/126 (88%)
 Strand = Plus / Plus

                                                                       
Query: 133 gctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggat 192
           ||||||||||||||||||||||| |  ||||||||||||||| ||||  | |||||||||
Sbjct: 145 gctgatcttcagaacgatgaggatcgtgcctacaggaagatccgactgagagctgaggat 204

                                                                       
Query: 193 gtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctc 252
           |||||||| | |||||||||||||||||||||||| ||||| || || || |||||||| 
Sbjct: 205 gtgcaaggaaagaatgtcctcacaaacttctggggaatggactttacaacagacaagctg 264

                 
Query: 253 aggtct 258
           ||||||
Sbjct: 265 aggtct 270
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>gb|BT016390.1| Zea mays clone Contig223 mRNA sequence
          Length = 1104

 Score =  125 bits (63), Expect = 7e-26
 Identities = 159/191 (83%)
 Strand = Plus / Plus

                                                                       
Query: 55  aagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctgaagcaccgg 114
           ||||| ||||| |||||||||||||| |||| |||||| || ||||| ||||||||| | 
Sbjct: 206 aagactctcgtatccaggacacagggtaccaggattgcttctgagggtctgaagcacaga 265

                                                                       
Query: 115 gagtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctacaggaagatc 174
           |  ||||| || |  |||||||||||||||  ||| ||||| || || |||||||| |||
Sbjct: 266 gtctttgaggtttgcctagctgatcttcagggcgacgaggatcaagcttacaggaaaatc 325

                                                                       
Query: 175 agactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggat 234
           || ||||||||||| |||||||| || | |||||| ||||||||||| ||||| ||| ||
Sbjct: 326 aggctccgtgctgaagatgtgcagggcaggaatgtgctcacaaacttttggggtatgaat 385

                      
Query: 235 ttcaccactga 245
           || ||||||||
Sbjct: 386 tttaccactga 396
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 1e-24
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                           
Query: 86      agattgcctcagagggcctgaagcaccgggagtttgaagtatctctagctgatcttcaga 145
               ||||||| || |||||||| |||||  | | |||||| || ||  |||||||||| ||||
Sbjct: 5244369 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 5244428

                                                                           
Query: 146     acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 205
               |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 5244429 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 5244488

                                    
Query: 206     atgtcctcacaaacttctggg 226
               | || ||||| ||||| ||||
Sbjct: 5244489 acgtgctcaccaacttttggg 5244509



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                             
Query: 51      cggcaagaccctcgtgtccaggacacaggg 80
               ||||||||||||||||||||||||||||||
Sbjct: 5243527 cggcaagaccctcgtgtccaggacacaggg 5243556
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>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3
             clone OSJNBa0021H20, complete sequence
          Length = 133079

 Score =  121 bits (61), Expect = 1e-24
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                         
Query: 86    agattgcctcagagggcctgaagcaccgggagtttgaagtatctctagctgatcttcaga 145
             ||||||| || |||||||| |||||  | | |||||| || ||  |||||||||| ||||
Sbjct: 67771 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 67830

                                                                         
Query: 146   acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 205
             |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 67831 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 67890

                                  
Query: 206   atgtcctcacaaacttctggg 226
             | || ||||| ||||| ||||
Sbjct: 67891 acgtgctcaccaacttttggg 67911



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                           
Query: 51    cggcaagaccctcgtgtccaggacacaggg 80
             ||||||||||||||||||||||||||||||
Sbjct: 66929 cggcaagaccctcgtgtccaggacacaggg 66958
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>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0091J11, from chromosome 3, complete sequence
          Length = 181163

 Score =  121 bits (61), Expect = 1e-24
 Identities = 121/141 (85%)
 Strand = Plus / Minus

                                                                         
Query: 86    agattgcctcagagggcctgaagcaccgggagtttgaagtatctctagctgatcttcaga 145
             ||||||| || |||||||| |||||  | | |||||| || ||  |||||||||| ||||
Sbjct: 12149 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 12090

                                                                         
Query: 146   acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 205
             |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 12089 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 12030

                                  
Query: 206   atgtcctcacaaacttctggg 226
             | || ||||| ||||| ||||
Sbjct: 12029 acgtgctcaccaacttttggg 12009



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                           
Query: 51    cggcaagaccctcgtgtccaggacacaggg 80
             ||||||||||||||||||||||||||||||
Sbjct: 12991 cggcaagaccctcgtgtccaggacacaggg 12962
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  121 bits (61), Expect = 1e-24
 Identities = 121/141 (85%)
 Strand = Plus / Minus

                                                                            
Query: 86       agattgcctcagagggcctgaagcaccgggagtttgaagtatctctagctgatcttcaga 145
                ||||||| ||||||||||| |||||||| | |||||| || ||  | |||||||||||||
Sbjct: 12316009 agattgcttcagagggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcaga 12315950

                                                                            
Query: 146      acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 205
                |||||||||| ||||| ||| | ||||||||||| ||||| ||||||||||| ||||  |
Sbjct: 12315949 acgatgaggatcaggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaa 12315890

                                     
Query: 206      atgtcctcacaaacttctggg 226
                |||| || |||||||||||||
Sbjct: 12315889 atgttcttacaaacttctggg 12315869



 Score = 46.1 bits (23), Expect = 0.055
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 46       aacgacggcaagaccctcgtgtccaggacacaggg 80
                |||| ||| ||||| ||||||||||||||||||||
Sbjct: 12318352 aacgtcgggaagacgctcgtgtccaggacacaggg 12318318
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 1e-24
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                           
Query: 86      agattgcctcagagggcctgaagcaccgggagtttgaagtatctctagctgatcttcaga 145
               ||||||| || |||||||| |||||  | | |||||| || ||  |||||||||| ||||
Sbjct: 5243584 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 5243643

                                                                           
Query: 146     acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 205
               |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 5243644 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 5243703

                                    
Query: 206     atgtcctcacaaacttctggg 226
               | || ||||| ||||| ||||
Sbjct: 5243704 acgtgctcaccaacttttggg 5243724



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                             
Query: 51      cggcaagaccctcgtgtccaggacacaggg 80
               ||||||||||||||||||||||||||||||
Sbjct: 5242742 cggcaagaccctcgtgtccaggacacaggg 5242771
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  121 bits (61), Expect = 1e-24
 Identities = 121/141 (85%)
 Strand = Plus / Minus

                                                                            
Query: 86       agattgcctcagagggcctgaagcaccgggagtttgaagtatctctagctgatcttcaga 145
                ||||||| ||||||||||| |||||||| | |||||| || ||  | |||||||||||||
Sbjct: 12270379 agattgcttcagagggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcaga 12270320

                                                                            
Query: 146      acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 205
                |||||||||| ||||| ||| | ||||||||||| ||||| ||||||||||| ||||  |
Sbjct: 12270319 acgatgaggatcaggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaa 12270260

                                     
Query: 206      atgtcctcacaaacttctggg 226
                |||| || |||||||||||||
Sbjct: 12270259 atgttcttacaaacttctggg 12270239



 Score = 46.1 bits (23), Expect = 0.055
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 46       aacgacggcaagaccctcgtgtccaggacacaggg 80
                |||| ||| ||||| ||||||||||||||||||||
Sbjct: 12272722 aacgtcgggaagacgctcgtgtccaggacacaggg 12272688
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 163702

 Score =  121 bits (61), Expect = 1e-24
 Identities = 121/141 (85%)
 Strand = Plus / Minus

                                                                         
Query: 86    agattgcctcagagggcctgaagcaccgggagtttgaagtatctctagctgatcttcaga 145
             ||||||| ||||||||||| |||||||| | |||||| || ||  | |||||||||||||
Sbjct: 30374 agattgcttcagagggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcaga 30315

                                                                         
Query: 146   acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 205
             |||||||||| ||||| ||| | ||||||||||| ||||| ||||||||||| ||||  |
Sbjct: 30314 acgatgaggatcaggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaa 30255

                                  
Query: 206   atgtcctcacaaacttctggg 226
             |||| || |||||||||||||
Sbjct: 30254 atgttcttacaaacttctggg 30234



 Score = 46.1 bits (23), Expect = 0.055
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 46    aacgacggcaagaccctcgtgtccaggacacaggg 80
             |||| ||| ||||| ||||||||||||||||||||
Sbjct: 32717 aacgtcgggaagacgctcgtgtccaggacacaggg 32683
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>gb|DQ164221.1| Nicotiana tabacum cyc07 mRNA, complete cds
          Length = 786

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 108/128 (84%)
 Strand = Plus / Plus

                                                                       
Query: 133 gctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggat 192
           |||||||||||||| |||||||| ||  | | |||||||||| |  |  | || || |||
Sbjct: 211 gctgatcttcagaaggatgaggatcaatctttcaggaagatccgcttgagggcagaagat 270

                                                                       
Query: 193 gtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctc 252
           |||||||||| |||||||||||||||||||||||| ||||||||||| || |||||| | 
Sbjct: 271 gtgcaagggaagaatgtcctcacaaacttctggggaatggatttcacaacagacaagttg 330

                   
Query: 253 aggtctct 260
           ||||||||
Sbjct: 331 aggtctct 338
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>ref|NM_119633.2| Arabidopsis thaliana structural constituent of ribosome AT4G34670
           mRNA, complete cds
          Length = 1093

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 155/191 (81%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           |||||||| ||||| |||||||||||||| ||||| ||||| ||| ||| |||||| || 
Sbjct: 223 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 282

                                                                       
Query: 127 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 186
           ||||| |||||||| || || ||||||||  | ||||||||||||||| | ||  | |||
Sbjct: 283 tctcttgctgatctacaaaatgatgaggataatgcctacaggaagatccgtcttagagct 342

                                                                       
Query: 187 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 246
           || ||||| || || | ||||||  | ||  | |||||||| ||||||||||| || |||
Sbjct: 343 gaagatgttcagggaaggaatgtgttgacccagttctggggtatggatttcacaaccgac 402

                      
Query: 247 aagctcaggtc 257
           ||||| |||||
Sbjct: 403 aagctaaggtc 413
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>gb|BT000122.1| Arabidopsis thaliana Putative S-phase-specific ribosomal protein
           (At4g34670) mRNA, complete cds
          Length = 581

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 155/191 (81%)
 Strand = Plus / Minus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           |||||||| ||||| |||||||||||||| ||||| ||||| ||| ||| |||||| || 
Sbjct: 434 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 375

                                                                       
Query: 127 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 186
           ||||| |||||||| || || ||||||||  | ||||||||||||||| | ||  | |||
Sbjct: 374 tctcttgctgatctacaaaatgatgaggataatgcctacaggaagatccgtcttagagct 315

                                                                       
Query: 187 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 246
           || ||||| || || | ||||||  | ||  | |||||||| ||||||||||| || |||
Sbjct: 314 gaagatgttcagggaaggaatgtgttgacccagttctggggtatggatttcacaaccgac 255

                      
Query: 247 aagctcaggtc 257
           ||||| |||||
Sbjct: 254 aagctaaggtc 244
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>gb|AY062500.1| Arabidopsis thaliana Putative S-phase-specific ribosomal protein
           (At4g34670; T4L20.250) mRNA, complete cds
          Length = 1094

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 155/191 (81%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           |||||||| ||||| |||||||||||||| ||||| ||||| ||| ||| |||||| || 
Sbjct: 223 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 282

                                                                       
Query: 127 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 186
           ||||| |||||||| || || ||||||||  | ||||||||||||||| | ||  | |||
Sbjct: 283 tctcttgctgatctacaaaatgatgaggataatgcctacaggaagatccgtcttagagct 342

                                                                       
Query: 187 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 246
           || ||||| || || | ||||||  | ||  | |||||||| ||||||||||| || |||
Sbjct: 343 gaagatgttcagggaaggaatgtgttgacccagttctggggtatggatttcacaaccgac 402

                      
Query: 247 aagctcaggtc 257
           ||||| |||||
Sbjct: 403 aagctaaggtc 413
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>emb|BX826401.1|CNS0A38P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZE07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 836

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 155/191 (81%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           |||||||| ||||| |||||||||||||| ||||| ||||| ||| ||| |||||| || 
Sbjct: 52  tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 111

                                                                       
Query: 127 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 186
           ||||| |||||||| || || ||||||||  | ||||||||||||||| | ||  | |||
Sbjct: 112 tctcttgctgatctacaaaatgatgaggataatgcctacaggaagatccgtcttagagct 171

                                                                       
Query: 187 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 246
           || ||||| || || | ||||||  | ||  | |||||||| ||||||||||| || |||
Sbjct: 172 gaagatgttcagggaaggaatgtgttgacccagttctggggtatggatttcacaaccgac 231

                      
Query: 247 aagctcaggtc 257
           ||||| |||||
Sbjct: 232 aagctaaggtc 242
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>emb|BX828268.1|CNS0A2YE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH6ZD12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1008

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 155/191 (81%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           |||||||| ||||| |||||||||||||| ||||| ||||| ||| ||| |||||| || 
Sbjct: 208 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 267

                                                                       
Query: 127 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 186
           ||||| |||||||| || || ||||||||  | ||||||||||||||| | ||  | |||
Sbjct: 268 tctcttgctgatctacaaaatgatgaggataatgcctacaggaagatccgtcttagagct 327

                                                                       
Query: 187 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 246
           || ||||| || || | ||||||  | ||  | |||||||| ||||||||||| || |||
Sbjct: 328 gaagatgttcagggaaggaatgtgttgacccagttctggggtatggatttcacaaccgac 387

                      
Query: 247 aagctcaggtc 257
           ||||| |||||
Sbjct: 388 aagctaaggtc 398
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>emb|AJ001342.1|ATCYC07 Arabidopsis thaliana mRNA for S-phase-specific ribosomal protein
          Length = 906

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 155/191 (81%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           |||||||| ||||| |||||||||||||| ||||| ||||| ||| ||| |||||| || 
Sbjct: 145 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 204

                                                                       
Query: 127 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 186
           ||||| |||||||| || || ||||||||  | ||||||||||||||| | ||  | |||
Sbjct: 205 tctcttgctgatctacaaaatgatgaggataatgcctacaggaagatccgtcttagagct 264

                                                                       
Query: 187 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 246
           || ||||| || || | ||||||  | ||  | |||||||| ||||||||||| || |||
Sbjct: 265 gaagatgttcagggaaggaatgtgttgacccagttctggggtatggatttcacaaccgac 324

                      
Query: 247 aagctcaggtc 257
           ||||| |||||
Sbjct: 325 aagctaaggtc 335
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>gb|DQ268835.1| Solanum tuberosum clone 115A11 cyc07-like protein mRNA, complete
           cds
          Length = 1020

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 107/128 (83%)
 Strand = Plus / Plus

                                                                       
Query: 133 gctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggat 192
           |||||||||||||| |||||||| ||||| |||||||||||| |  |  | || || |||
Sbjct: 254 gctgatcttcagaaggatgaggatcaggcttacaggaagatccgcttgagagcagaagat 313

                                                                       
Query: 193 gtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctc 252
           |||||||||| |||||||||||||||||||   || ||||| ||||| || |||||| | 
Sbjct: 314 gtgcaagggaggaatgtcctcacaaacttccatggaatggacttcacaacagacaagttg 373

                   
Query: 253 aggtctct 260
           ||||||||
Sbjct: 374 aggtctct 381
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>gb|DQ252490.1| Solanum tuberosum clone 059D09 cyc07-like mRNA, complete cds
          Length = 996

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 107/128 (83%)
 Strand = Plus / Plus

                                                                       
Query: 133 gctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggat 192
           |||||||||||||| |||||||| ||||| |||||||||||| |  |  | || || |||
Sbjct: 232 gctgatcttcagaaggatgaggatcaggcttacaggaagatccgcttgagagcagaagat 291

                                                                       
Query: 193 gtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctc 252
           |||||||||| |||||||||||||||||||   || ||||| ||||| || |||||| | 
Sbjct: 292 gtgcaagggaggaatgtcctcacaaacttccatggaatggacttcacaacagacaagttg 351

                   
Query: 253 aggtctct 260
           ||||||||
Sbjct: 352 aggtctct 359
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                            
Query: 136      gatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtg 195
                ||||||||||| || ||||| ||||| ||||||||| | ||||| |||||||||||||| 
Sbjct: 10823735 gatcttcagaatgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgtt 10823676

                                               
Query: 196      caagggatgaatgtcctcacaaacttctggg 226
                || |||| |||||||||||| || |||||||
Sbjct: 10823675 caggggaggaatgtcctcacgaatttctggg 10823645



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 42       ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaag 87
                |||||||  ||||||||||||||| |||||||| ||||||||||||
Sbjct: 10824441 ccgcaacatcggcaagaccctcgtctccaggacccaggggaccaag 10824396
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>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1756_H07
          Length = 217205

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                         
Query: 136   gatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtg 195
             ||||||||||| || ||||| ||||| ||||||||| | ||||| |||||||||||||| 
Sbjct: 29934 gatcttcagaatgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgtt 29875

                                            
Query: 196   caagggatgaatgtcctcacaaacttctggg 226
             || |||| |||||||||||| || |||||||
Sbjct: 29874 caggggaggaatgtcctcacgaatttctggg 29844



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                           
Query: 42    ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaag 87
             |||||||  ||||||||||||||| |||||||| ||||||||||||
Sbjct: 30640 ccgcaacatcggcaagaccctcgtctccaggacccaggggaccaag 30595
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>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1115_D03
          Length = 169378

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                          
Query: 136    gatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtg 195
              ||||||||||| || ||||| ||||| ||||||||| | ||||| |||||||||||||| 
Sbjct: 163216 gatcttcagaatgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgtt 163157

                                             
Query: 196    caagggatgaatgtcctcacaaacttctggg 226
              || |||| |||||||||||| || |||||||
Sbjct: 163156 caggggaggaatgtcctcacgaatttctggg 163126



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 42     ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaag 87
              |||||||  ||||||||||||||| |||||||| ||||||||||||
Sbjct: 163922 ccgcaacatcggcaagaccctcgtctccaggacccaggggaccaag 163877
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>emb|Z25769.1|BRSPSG B.rapa mRNA for S phase specific gene
          Length = 1050

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 154/191 (80%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           ||||| || ||||| ||||||||||| ||||||||  |||| ||| | |  ||||| || 
Sbjct: 250 tccagaactcagggtaccaagattgcatcagagggtttgaaacacagagtctttgaggtg 309

                                                                       
Query: 127 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 186
           ||||| ||||||||| | || |||||||||||||| |||||||||||| | ||| | |||
Sbjct: 310 tctcttgctgatcttaacaaggatgaggaccaggcttacaggaagatccgtctcagagct 369

                                                                       
Query: 187 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 246
           || ||||| || || | ||||||| | ||  | |||||||| ||||| ||||| || |||
Sbjct: 370 gaagatgtccagggcaggaatgtcttgacccagttctggggtatggacttcacaaccgac 429

                      
Query: 247 aagctcaggtc 257
           || ||||||||
Sbjct: 430 aaactcaggtc 440
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>gb|DQ241862.1| Solanum tuberosum clone 027B03 40S ribosomal protein S3a-like mRNA,
           complete cds
          Length = 1118

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 172/215 (80%)
 Strand = Plus / Plus

                                                                       
Query: 46  aacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctg 105
           |||| |||||| ||||| ||  ||||||| ||||| ||||||||||| ||||||||||| 
Sbjct: 210 aacgtcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagagggccta 269

                                                                       
Query: 106 aagcaccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctac 165
           || ||| | |  ||||||||    || |||||||||||||| |||||||| ||||| | |
Sbjct: 270 aaacacagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttc 329

                                                                       
Query: 166 aggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctgg 225
           ||||| ||| |  |  | || || ||||||||||||| |||||| ||||||||||||   
Sbjct: 330 aggaaaatccgtttgagagcagaagatgtgcaagggaggaatgttctcacaaacttccat 389

                                              
Query: 226 ggcatggatttcaccactgacaagctcaggtctct 260
           || ||||||||||| || || ||| | ||||||||
Sbjct: 390 ggaatggatttcacaacagataagttgaggtctct 424
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>gb|L23553.1|BRRSPSK Brassica rapa S-phase-specific (BIS289) mRNA, complete cds
          Length = 1050

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 154/191 (80%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           ||||| || ||||| ||||||||||| ||||||||  |||| ||| | |  ||||| || 
Sbjct: 250 tccagaactcagggtaccaagattgcatcagagggtttgaaacacagagtctttgaggtg 309

                                                                       
Query: 127 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 186
           ||||| ||||||||| | || |||||||||||||| |||||||||||| | ||| | |||
Sbjct: 310 tctcttgctgatcttaacaaggatgaggaccaggcttacaggaagatccgtctcagagct 369

                                                                       
Query: 187 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 246
           || ||||| || || | ||||||| | ||  | |||||||| ||||| ||||| || |||
Sbjct: 370 gaagatgtccagggcaggaatgtcttgacccagttctggggtatggacttcacaaccgac 429

                      
Query: 247 aagctcaggtc 257
           || ||||||||
Sbjct: 430 aaactcaggtc 440
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>gb|DQ445133.1| Striga asiatica isolate St513 S phase protein mRNA, partial cds
          Length = 571

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 148 gatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaat 207
           |||||||||||  ||| |||||||||| |  |  | ||||| ||||| || || | ||||
Sbjct: 67  gatgaggaccactccttcaggaagatccgtttgagagctgaagatgttcagggaaagaat 126

                                                                
Query: 208 gtcctcacaaacttctggggcatggatttcaccactgacaagctcaggtctct 260
           || |||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 127 gttctcacaaacttctggggcatggatttcaccaccgacaagctgagatctct 179
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>gb|AF093109.1| Tortula ruralis ribosomal protein S3 (rps3) mRNA, complete cds
          Length = 899

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 99/119 (83%)
 Strand = Plus / Plus

                                                                       
Query: 142 cagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaaggg 201
           |||||||||||||||||||| | | | |||||||  ||  | || ||||||||||| || 
Sbjct: 238 cagaacgatgaggaccaggctttccgcaagatcaagctgagggcggaggatgtgcagggc 297

                                                                      
Query: 202 atgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctcaggtctct 260
           | ||| || ||||| ||||||||||||||||| |||||||| ||||||||  |||||||
Sbjct: 298 aagaacgtgctcaccaacttctggggcatggacttcaccacggacaagctgcggtctct 356
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>dbj|AB029635.1| Daucus carota mRNA for cyc07, complete cds
          Length = 1050

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                       
Query: 148 gatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaat 207
           |||||||||||||| || ||||||||  | ||  | || |||||||||||||||| ||||
Sbjct: 247 gatgaggaccaggcttataggaagattcgcctgagagcagaggatgtgcaagggaagaat 306

                                                                
Query: 208 gtcctcacaaacttctggggcatggatttcaccactgacaagctcaggtctct 260
           || || ||||||||||  || ||||| ||||| ||||||||| | ||||||||
Sbjct: 307 gtgcttacaaacttctatggaatggacttcacaactgacaagttgaggtctct 359
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>gb|AY109383.1| Zea mays CL7224_1 mRNA sequence
          Length = 1236

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 178 ctccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttc 237
           ||||||||||| ||||||||||| | |||||| ||||||||||| ||||| ||| |||| 
Sbjct: 866 ctccgtgctgaagatgtgcaaggcaggaatgtgctcacaaacttttggggtatgaatttt 807

                   
Query: 238 accactga 245
           ||||||||
Sbjct: 806 accactga 799



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                    
Query: 55  aagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctgaagcac 111
           ||||| ||||| |||||||||||||| |||| |||||| || ||||| |||||||||
Sbjct: 989 aagactctcgtatccaggacacagggtaccaggattgcttctgagggtctgaagcac 933
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>emb|AJ515028.1|CAR515028 Cicer arietinum mRNA for ribosomal protein S3a (rs3a gene)
          Length = 1026

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 204 gaatgtcctcacaaacttctggggcatggatttcaccactgacaagctcaggtct 258
           |||||||||||| ||||| |  || ||||||||||||||||||||||||||||||
Sbjct: 332 gaatgtcctcaccaacttttatggtatggatttcaccactgacaagctcaggtct 386
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>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82
          Length = 195165

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                        
Query: 86   agattgcctcagagggcctgaagcaccgggagtttgaagtatctctagctgatcttcaga 145
            |||||||||| ||||| ||||| ||| ||| |||||| || ||||| |||||||| || |
Sbjct: 4117 agattgcctctgagggactgaaacacagggtgtttgaggtttctcttgctgatctacaaa 4176

                                         
Query: 146  acgatgaggaccaggcctacaggaagatc 174
            | ||||||||  | |||||||||||||||
Sbjct: 4177 atgatgaggataatgcctacaggaagatc 4205
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>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81
          Length = 195921

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                          
Query: 86     agattgcctcagagggcctgaagcaccgggagtttgaagtatctctagctgatcttcaga 145
              |||||||||| ||||| ||||| ||| ||| |||||| || ||||| |||||||| || |
Sbjct: 195038 agattgcctctgagggactgaaacacagggtgtttgaggtttctcttgctgatctacaaa 195097

                                           
Query: 146    acgatgaggaccaggcctacaggaagatc 174
              | ||||||||  | |||||||||||||||
Sbjct: 195098 atgatgaggataatgcctacaggaagatc 195126
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>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project)
          Length = 125502

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                         
Query: 86    agattgcctcagagggcctgaagcaccgggagtttgaagtatctctagctgatcttcaga 145
             |||||||||| ||||| ||||| ||| ||| |||||| || ||||| |||||||| || |
Sbjct: 85349 agattgcctctgagggactgaaacacagggtgtttgaggtttctcttgctgatctacaaa 85408

                                          
Query: 146   acgatgaggaccaggcctacaggaagatc 174
             | ||||||||  | |||||||||||||||
Sbjct: 85409 atgatgaggataatgcctacaggaagatc 85437
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>gb|DQ268856.1| Solanum tuberosum clone 174A02 cyc07-like protein mRNA, complete
           cds
          Length = 1045

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 169/215 (78%)
 Strand = Plus / Plus

                                                                       
Query: 46  aacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctg 105
           |||| |||||| ||||| ||  ||||||| ||||| ||||||||||| ||||| ||||| 
Sbjct: 197 aacgtcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagatggccta 256

                                                                       
Query: 106 aagcaccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctac 165
           || ||| | |  ||||||||    || |||||||||||||| |||||||| ||||| | |
Sbjct: 257 aaacacagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttc 316

                                                                       
Query: 166 aggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctgg 225
           ||||| ||| |  |  | || || |||||||||||||  ||||| |||||||| |||   
Sbjct: 317 aggaaaatccgtttgagagcagaagatgtgcaagggagaaatgttctcacaaatttccat 376

                                              
Query: 226 ggcatggatttcaccactgacaagctcaggtctct 260
           || ||||||||||| || || ||| | ||||||||
Sbjct: 377 ggaatggatttcacaacagataagttgaggtctct 411
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>gb|DQ268849.1| Solanum tuberosum clone 155F06 cyc07-like protein mRNA, complete
           cds
          Length = 1038

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 169/215 (78%)
 Strand = Plus / Plus

                                                                       
Query: 46  aacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctg 105
           |||| |||||| ||||| ||  ||||||| ||||| ||||||||||| ||||| ||||| 
Sbjct: 181 aacgtcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagatggccta 240

                                                                       
Query: 106 aagcaccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctac 165
           || ||| | |  ||||||||    || |||||||||||||| |||||||| ||||| | |
Sbjct: 241 aaacacagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttc 300

                                                                       
Query: 166 aggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctgg 225
           ||||| ||| |  |  | || || |||||||||||||  ||||| |||||||| |||   
Sbjct: 301 aggaaaatccgtttgagagcagaagatgtgcaagggagaaatgttctcacaaatttccat 360

                                              
Query: 226 ggcatggatttcaccactgacaagctcaggtctct 260
           || ||||||||||| || || ||| | ||||||||
Sbjct: 361 ggaatggatttcacaacagataagttgaggtctct 395
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>gb|DQ252485.1| Solanum tuberosum clone 048H05 cyc07-like mRNA, complete cds
          Length = 998

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 169/215 (78%)
 Strand = Plus / Plus

                                                                       
Query: 46  aacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagagggcctg 105
           |||| |||||| ||||| ||  ||||||| ||||| ||||||||||| ||||| ||||| 
Sbjct: 157 aacgtcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagatggccta 216

                                                                       
Query: 106 aagcaccgggagtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctac 165
           || ||| | |  ||||||||    || |||||||||||||| |||||||| ||||| | |
Sbjct: 217 aaacacagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttc 276

                                                                       
Query: 166 aggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctgg 225
           ||||| ||| |  |  | || || |||||||||||||  ||||| |||||||| |||   
Sbjct: 277 aggaaaatccgtttgagagcagaagatgtgcaagggagaaatgttctcacaaatttccat 336

                                              
Query: 226 ggcatggatttcaccactgacaagctcaggtctct 260
           || ||||||||||| || || ||| | ||||||||
Sbjct: 337 ggaatggatttcacaacagataagttgaggtctct 371
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>gb|DQ268842.1| Solanum tuberosum clone 135C12 40S ribosomal protein S3a-like
           protein mRNA, complete cds
          Length = 1059

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 73  acacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagtatctcta 132
           |||||||| || |||||||| ||||| ||||||||||| || | ||||||||| ||  | 
Sbjct: 182 acacagggtacaaagattgcttcagaaggcctgaagcatcgtgtgtttgaagtgtcattg 241

                         
Query: 133 gctgatcttcagaa 146
           ||||||||||||||
Sbjct: 242 gctgatcttcagaa 255
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>ref|XM_774945.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal
           protein S3a, transcript variant 1 (LOC575056), mRNA
          Length = 1003

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 92/113 (81%)
 Strand = Plus / Plus

                                                                       
Query: 42  ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagaggg 101
           |||||||  ||||||||| |||||  ||||||||||||| || || || ||||| || ||
Sbjct: 130 ccgcaacatcggcaagactctcgtaaccaggacacagggaacaaaaatcgcctctgacgg 189

                                                                
Query: 102 cctgaagcaccgggagtttgaagtatctctagctgatcttcagaacgatgagg 154
            ||||||   || | |||||| || ||||| |||||||| |||||||||||||
Sbjct: 190 tctgaagggacgtgtgtttgaggtctctctggctgatctgcagaacgatgagg 242
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>ref|XM_796644.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal
           protein S3a, transcript variant 2 (LOC575056), mRNA
          Length = 749

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 92/113 (81%)
 Strand = Plus / Plus

                                                                       
Query: 42  ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagaggg 101
           |||||||  ||||||||| |||||  ||||||||||||| || || || ||||| || ||
Sbjct: 130 ccgcaacatcggcaagactctcgtaaccaggacacagggaacaaaaatcgcctctgacgg 189

                                                                
Query: 102 cctgaagcaccgggagtttgaagtatctctagctgatcttcagaacgatgagg 154
            ||||||   || | |||||| || ||||| |||||||| |||||||||||||
Sbjct: 190 tctgaagggacgtgtgtttgaggtctctctggctgatctgcagaacgatgagg 242
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>ref|XM_785062.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal
           protein S3a (V-fos transformation effector protein)
           (LOC585229), partial mRNA
          Length = 327

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 92/113 (81%)
 Strand = Plus / Plus

                                                                       
Query: 42  ccgcaacgacggcaagaccctcgtgtccaggacacaggggaccaagattgcctcagaggg 101
           |||||||  ||||||||| |||||  ||||||||||||| || || || ||||| || ||
Sbjct: 96  ccgcaacatcggcaagactctcgtaaccaggacacagggaacaaaaatcgcctctgacgg 155

                                                                
Query: 102 cctgaagcaccgggagtttgaagtatctctagctgatcttcagaacgatgagg 154
            ||||||   || | |||||| || ||||| |||||||| |||||||||||||
Sbjct: 156 tctgaagggacgtgtgtttgaggtctctctggctgatctgcagaacgatgagg 208
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>gb|BT012853.1| Lycopersicon esculentum clone 113933F, mRNA sequence
          Length = 1053

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 73  acacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagtatctcta 132
           |||||||| || |||||||| ||||| ||||||||||| || | ||| ||||| ||  | 
Sbjct: 222 acacagggtacaaagattgcttcagaaggcctgaagcatcgtgtgttcgaagtgtcattg 281

                         
Query: 133 gctgatcttcagaa 146
           ||||||||||||||
Sbjct: 282 gctgatcttcagaa 295
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>emb|X68555.1|ACKRPA A.californica KRP-A gene
          Length = 849

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 133 gctgatcttcagaacgatgagg 154
           ||||||||||||||||||||||
Sbjct: 223 gctgatcttcagaacgatgagg 244
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>gb|L31645.1|HNNSPSP Helianthus annuus ribosomal protein S3a mRNA, complete cds
          Length = 982

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 142/182 (78%)
 Strand = Plus / Plus

                                                                       
Query: 76  caggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagtatctctagct 135
           ||||| || |||||||| || |||||  |||| || |||| |||||| || ||| | |||
Sbjct: 223 cagggtactaagattgcttccgagggattgaaacatcgggtgtttgaggtgtctttggct 282

                                                                       
Query: 136 gatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtg 195
           ||||| ||||| ||||| || ||  ||||||| |||||| |  |  | ||||| || || 
Sbjct: 283 gatctccagaatgatgaagatcattcctacagaaagatccggttgagagctgaagacgtt 342

                                                                       
Query: 196 caagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctcagg 255
           ||||||| ||||||  | || || |||||||| |||||| | ||||| || |||||||||
Sbjct: 343 caagggaagaatgttttgaccaatttctggggtatggatgttaccacagataagctcagg 402

             
Query: 256 tc 257
           ||
Sbjct: 403 tc 404
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>ref|NM_111356.3| Arabidopsis thaliana structural constituent of ribosome AT3G04840
           mRNA, complete cds
          Length = 1004

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           ||||| || ||||| ||||| ||||||||||| ||| |||| ||| | |  ||||| || 
Sbjct: 203 tccagaactcagggtaccaaaattgcctcagaaggcttgaaacacagagtttttgaggtt 262

                            
Query: 127 tctctagctgatcttca 143
           ||||| |||||||||||
Sbjct: 263 tctcttgctgatcttca 279
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>gb|AY596294.1| Haloarcula marismortui ATCC 43049 plasmid pNG500, complete sequence
          Length = 132678

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    gaccctcgtgtccaggacaca 77
             |||||||||||||||||||||
Sbjct: 26758 gaccctcgtgtccaggacaca 26738
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>gb|AY081585.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase
           specific) (At3g04840) mRNA, complete cds
          Length = 870

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           ||||| || ||||| ||||| ||||||||||| ||| |||| ||| | |  ||||| || 
Sbjct: 145 tccagaactcagggtaccaaaattgcctcagaaggcttgaaacacagagtttttgaggtt 204

                            
Query: 127 tctctagctgatcttca 143
           ||||| |||||||||||
Sbjct: 205 tctcttgctgatcttca 221
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>gb|AY062796.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase
           specific) (At3g04840; T9J14.21) mRNA, complete cds
          Length = 1000

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           ||||| || ||||| ||||| ||||||||||| ||| |||| ||| | |  ||||| || 
Sbjct: 202 tccagaactcagggtaccaaaattgcctcagaaggcttgaaacacagagtttttgaggtt 261

                            
Query: 127 tctctagctgatcttca 143
           ||||| |||||||||||
Sbjct: 262 tctcttgctgatcttca 278
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>gb|AF379639.1|AF379639 Heliothis virescens ribosomal protein S3a mRNA, partial cds
          Length = 794

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 226 ggcatggatttcaccactgacaagctcag 254
           ||||||||  |||||||||||||||||||
Sbjct: 271 ggcatggacctcaccactgacaagctcag 299
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>emb|BX824488.1|CNS0A5KP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH51ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 927

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           ||||| || ||||| ||||| ||||||||||| ||| |||| ||| | |  ||||| || 
Sbjct: 135 tccagaactcagggtaccaaaattgcctcagaaggcttgaaacacagagtttttgaggtt 194

                            
Query: 127 tctctagctgatcttca 143
           ||||| |||||||||||
Sbjct: 195 tctcttgctgatcttca 211
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>gb|AF429977.1| Spodoptera frugiperda ribosomal protein S3A mRNA, complete cds
          Length = 873

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 226 ggcatggatttcaccactgacaagctcag 254
           ||||||||  |||||||||||||||||||
Sbjct: 337 ggcatggacctcaccactgacaagctcag 365
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>gb|AY085787.1| Arabidopsis thaliana clone 18185 mRNA, complete sequence
          Length = 1001

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 67  tccaggacacaggggaccaagattgcctcagagggcctgaagcaccgggagtttgaagta 126
           ||||| || ||||| ||||| ||||||||||| ||| |||| ||| | |  ||||| || 
Sbjct: 203 tccagaactcagggtaccaaaattgcctcagaaggcttgaaacacagagtttttgaggtt 262

                            
Query: 127 tctctagctgatcttca 143
           ||||| |||||||||||
Sbjct: 263 tctcttgctgatcttca 279
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>gb|AC119954.12| Mus musculus chromosome 1, clone RP24-450P2, complete sequence
          Length = 179212

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    atttcaccactgacaagctc 252
              ||||||||||||||||||||
Sbjct: 143375 atttcaccactgacaagctc 143356
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>gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, complete sequence
          Length = 167687

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   atttcaccactgacaagctc 252
             ||||||||||||||||||||
Sbjct: 89646 atttcaccactgacaagctc 89665
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>ref|XM_754891.1| Ustilago maydis 521 hypothetical protein (UM03837.1) partial mRNA
          Length = 4251

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   ccagccgcaacgacggcaag 57
            ||||||||||||||||||||
Sbjct: 1673 ccagccgcaacgacggcaag 1692
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>gb|AC104783.3| Homo sapiens BAC clone RP11-36G9 from 4, complete sequence
          Length = 28480

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  atgaatgtcctcacaaactt 221
            ||||||||||||||||||||
Sbjct: 4827 atgaatgtcctcacaaactt 4846
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>dbj|AB092486.1| Gallus gallus gene for iron-responsive element-binding protein, exon
            sequence
          Length = 6946

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 204  gaatgtcctcacaaacttctgggg 227
            ||||||||||| ||||||||||||
Sbjct: 3631 gaatgtcctcataaacttctgggg 3654


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,959,639
Number of Sequences: 3902068
Number of extensions: 1959639
Number of successful extensions: 35251
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 35093
Number of HSP's gapped (non-prelim): 147
length of query: 260
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 238
effective length of database: 17,147,199,772
effective search space: 4081033545736
effective search space used: 4081033545736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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