ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart17g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CBP3_HORVU (P21529) Serine carboxypeptidase 3 precursor (EC 3.4.... 48 7e-06
2CBP3_WHEAT (P11515) Serine carboxypeptidase 3 precursor (EC 3.4.... 34 0.13
3CBP3_ORYSA (P37891) Serine carboxypeptidase 3 precursor (EC 3.4.... 32 0.51

>CBP3_HORVU (P21529) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine|
           carboxypeptidase III) (CP-MIII)
          Length = 508

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +3

Query: 6   SFPGAQAEWFIRALNLLPKDSSSSSG 83
           SFPGAQAE  IRALNLLPKDSSSSSG
Sbjct: 31  SFPGAQAERLIRALNLLPKDSSSSSG 56



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>CBP3_WHEAT (P11515) Serine carboxypeptidase 3 precursor (EC 3.4.16.5)|
          (Serine carboxypeptidase III) (CP-WIII)
          Length = 500

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +3

Query: 6  SFPGAQAEWFIRALNLLP 59
          SFPGAQAE  IRALNLLP
Sbjct: 31 SFPGAQAERLIRALNLLP 48



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>CBP3_ORYSA (P37891) Serine carboxypeptidase 3 precursor (EC 3.4.16.5)|
          (Serine carboxypeptidase III)
          Length = 500

 Score = 32.0 bits (71), Expect = 0.51
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +3

Query: 9  FPGAQAEWFIRALNLLPKDS 68
          FP AQAE  IR+LNLLPK++
Sbjct: 32 FPAAQAERLIRSLNLLPKEA 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.118    0.275 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,851,651
Number of Sequences: 219361
Number of extensions: 68566
Number of successful extensions: 200
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 80,573,946
effective HSP length: 3
effective length of database: 79,915,863
effective search space used: 1917980712
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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