ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart17f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACCO3_LYCES (P10967) 1-aminocyclopropane-1-carboxylate oxidase h... 56 5e-08
2DV4H_CATRO (O04847) Desacetoxyvindoline 4-hydroxylase (EC 1.14.1... 47 2e-05
3LDOX_PERFR (O04274) Leucoanthocyanidin dioxygenase (EC 1.14.11.1... 37 0.024
4FLS_MALDO (Q9XHG2) Flavonol synthase/flavanone 3-hydroxylase (EC... 32 1.0
5FLS_MATIN (O04395) Flavonol synthase/flavanone 3-hydroxylase (EC... 31 1.7
6HY6H_HYONI (P24397) Hyoscyamine 6-dioxygenase (EC 1.14.11.11) (H... 30 2.3
7LDOX_MALDO (P51091) Leucoanthocyanidin dioxygenase (EC 1.14.11.1... 30 2.9

>ACCO3_LYCES (P10967) 1-aminocyclopropane-1-carboxylate oxidase homolog (Protein|
           E8)
          Length = 363

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
 Frame = +3

Query: 120 VKAFDESRTGVRGLVESGVSTVPDLFVHPDPYASVPLAPPGVSIPVVDLS------LXXX 281
           +KAFD+++ GV+GLV+SG++ VP +FV P P             PV+DL       +   
Sbjct: 16  LKAFDDTKAGVKGLVDSGITKVPQIFVLP-PKDRAKKCETHFVFPVIDLQGIDEDPIKHK 74

Query: 282 XXXXXXXXXXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAHYGR 443
                       WGFF +VN+   +P+S   R L   R F E     +  +Y R
Sbjct: 75  EIVDKVRDASEKWGFFQVVNHG--IPTSVLDRTLQGTRQFFEQDNEVKKQYYTR 126



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>DV4H_CATRO (O04847) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20)|
          Length = 401

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
 Frame = +3

Query: 120 VKAFDESRTGVRGLVESGVSTVPDLFVHPD---PYASVPLAPPGVSIPVVDL------SL 272
           +KAFDE++ GV+G+V++G++ +P +F+         SV      + IPV++L      S 
Sbjct: 45  LKAFDETKAGVKGIVDTGITKIPRIFIDQPKNLDRISVCRGKSDIKIPVINLNGLSSNSE 104

Query: 273 XXXXXXXXXXXXXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAHYGR 443
                          +GFF +VN+   +P     + +  VR F+E     +  +Y R
Sbjct: 105 IRREIVEKIGEASEKYGFFQIVNHG--IPQDVMDKMVDGVRKFHEQDDQIKRQYYSR 159



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>LDOX_PERFR (O04274) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)|
           (Leucocyanidin oxygenase) (Leucoanthocyanidin
           hydroxylase)
          Length = 362

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 15/110 (13%)
 Frame = +3

Query: 150 VRGLVESGVSTVPDLFVHPDPYASVPL--------APPGVSIPVVDLSLXXXXXXXXXXX 305
           V  L  SG+ T+P  +V P+      +        +  G  +P +DL             
Sbjct: 12  VEELARSGLDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKK 71

Query: 306 -------XXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAH 434
                     DWG  HL+N+   +P     R  AA + F ELP  E+ A+
Sbjct: 72  CHEELKKAATDWGVMHLINHG--IPEELIDRVKAAGKEFFELPVEEKEAY 119



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>FLS_MALDO (Q9XHG2) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)|
           (EC 1.14.11.9) (FLS)
          Length = 337

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
 Frame = +3

Query: 165 ESGVSTVPDLFVHPDPYASVPLAPPG--VSIPVVDLS-LXXXXXXXXXXXXXRDWGFFHL 335
           ES   T+P  F+  +          G  + +P++D S                +WG + +
Sbjct: 11  ESNEGTIPAEFIRSENEQPGITTVHGKVLEVPIIDFSDPDEEKLIVQITEASSNWGMYQI 70

Query: 336 VNYEALVPSSYPARALAAVRAFNELPAPERSAH 434
           VN++  +PS   ++  A  + F ELP  E+ A+
Sbjct: 71  VNHD--IPSEVISKLQAVGKEFFELPQEEKEAY 101



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>FLS_MATIN (O04395) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)|
           (EC 1.14.11.9) (FLS) (Fragment)
          Length = 291

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 249 IPVVDLSL-XXXXXXXXXXXXXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPER 425
           +PVVDLS                DWG F +VN+   +P+    R     R F ELP  E+
Sbjct: 2   VPVVDLSCPDEELVARTVVKASEDWGVFQVVNHG--IPTELIQRLQKVGREFFELPEAEK 59



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>HY6H_HYONI (P24397) Hyoscyamine 6-dioxygenase (EC 1.14.11.11) (Hyoscyamine|
           6-beta-hydroxylase)
          Length = 344

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/82 (21%), Positives = 33/82 (40%)
 Frame = +3

Query: 180 TVPDLFVHPDPYASVPLAPPGVSIPVVDLSLXXXXXXXXXXXXXRDWGFFHLVNYEALVP 359
           +V + F+ P    +    P G  +P++DL               +D+G F ++N+    P
Sbjct: 12  SVSESFIAPLQKRAEKDVPVGNDVPIIDLQQHHHLLVQQITKACQDFGLFQVINHG--FP 69

Query: 360 SSYPARALAAVRAFNELPAPER 425
                  +   + F  LPA E+
Sbjct: 70  EELMLETMEVCKEFFALPAEEK 91



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>LDOX_MALDO (P51091) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)|
           (Leucocyanidin oxygenase) (Leucoanthocyanidin
           hydroxylase) (Anthocyanidin synthase)
          Length = 357

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 14/115 (12%)
 Frame = +3

Query: 132 DESRTGVRGLVESGVSTVPDLFVHP-DPYASV------PLAPPGVSIPVVDLSLXXXXXX 290
           D   + V  L  SG+ST+P  ++ P D   ++           G  +P +DL        
Sbjct: 5   DSVNSRVETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNE 64

Query: 291 XXXX-------XXXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAH 434
                          DWG  HLVN+   +      +   A +AF +LP  ++  +
Sbjct: 65  KVRAKCREKLKKAAVDWGVMHLVNHG--ISDELMDKVRKAGKAFFDLPIEQKEKY 117


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.133    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,287,813
Number of Sequences: 219361
Number of extensions: 495612
Number of successful extensions: 2152
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2150
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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