ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart17f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACCO3_LYCES (P10967) 1-aminocyclopropane-1-carboxylate oxidase h... 82 1e-15
2DV4H_CATRO (O04847) Desacetoxyvindoline 4-hydroxylase (EC 1.14.1... 60 3e-09
3LDOX_PERFR (O04274) Leucoanthocyanidin dioxygenase (EC 1.14.11.1... 43 7e-04
4LDOX_MALDO (P51091) Leucoanthocyanidin dioxygenase (EC 1.14.11.1... 35 0.18
5FLS_MALDO (Q9XHG2) Flavonol synthase/flavanone 3-hydroxylase (EC... 32 1.5
6LDOX_ARATH (Q96323) Leucoanthocyanidin dioxygenase (EC 1.14.11.1... 31 2.6
7HY6H_HYONI (P24397) Hyoscyamine 6-dioxygenase (EC 1.14.11.11) (H... 31 2.6
8LDOX_PETHY (P51092) Leucoanthocyanidin dioxygenase (EC 1.14.11.1... 30 4.4
9FL3H_VITVI (P41090) Naringenin,2-oxoglutarate 3-dioxygenase (EC ... 30 4.4

>ACCO3_LYCES (P10967) 1-aminocyclopropane-1-carboxylate oxidase homolog (Protein|
           E8)
          Length = 363

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
 Frame = +3

Query: 120 VKAFDESRTGVRGLVESGVSTVPDLFVHPDPYASVPLAPPGVSIPVVDLS------LXXX 281
           +KAFD+++ GV+GLV+SG++ VP +FV P P             PV+DL       +   
Sbjct: 16  LKAFDDTKAGVKGLVDSGITKVPQIFVLP-PKDRAKKCETHFVFPVIDLQGIDEDPIKHK 74

Query: 282 XXXXXXXXXXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAHYGRAMGGGV 461
                       WGFF +VN+   +P+S   R L   R F E     +  +Y R     V
Sbjct: 75  EIVDKVRDASEKWGFFQVVNHG--IPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKV 132

Query: 462 SYSSNVDLYRSA--AASWRDTI 521
            Y+SN+DLY+S+  AASWRDTI
Sbjct: 133 VYTSNLDLYKSSVPAASWRDTI 154



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>DV4H_CATRO (O04847) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20)|
          Length = 401

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
 Frame = +3

Query: 120 VKAFDESRTGVRGLVESGVSTVPDLFVHPD---PYASVPLAPPGVSIPVVDL------SL 272
           +KAFDE++ GV+G+V++G++ +P +F+         SV      + IPV++L      S 
Sbjct: 45  LKAFDETKAGVKGIVDTGITKIPRIFIDQPKNLDRISVCRGKSDIKIPVINLNGLSSNSE 104

Query: 273 XXXXXXXXXXXXXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAHYGR-AM 449
                          +GFF +VN+   +P     + +  VR F+E     +  +Y R   
Sbjct: 105 IRREIVEKIGEASEKYGFFQIVNHG--IPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRF 162

Query: 450 GGGVSYSSNVDLYRSAAASWRDTIQ 524
                YSSN  L    A +WRDT++
Sbjct: 163 NKNFLYSSNYVLIPGIACNWRDTME 187



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>LDOX_PERFR (O04274) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)|
           (Leucocyanidin oxygenase) (Leucoanthocyanidin
           hydroxylase)
          Length = 362

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 35/138 (25%), Positives = 50/138 (36%), Gaps = 16/138 (11%)
 Frame = +3

Query: 150 VRGLVESGVSTVPDLFVHPDPYASVPL--------APPGVSIPVVDLSLXXXXXXXXXXX 305
           V  L  SG+ T+P  +V P+      +        +  G  +P +DL             
Sbjct: 12  VEELARSGLDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKK 71

Query: 306 -------XXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAHYGRAMGGGV- 461
                     DWG  HL+N+   +P     R  AA + F ELP  E+ A+      G V 
Sbjct: 72  CHEELKKAATDWGVMHLINHG--IPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQ 129

Query: 462 SYSSNVDLYRSAAASWRD 515
            Y S +    S    W D
Sbjct: 130 GYGSKLANNASGQLEWED 147



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>LDOX_MALDO (P51091) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)|
           (Leucocyanidin oxygenase) (Leucoanthocyanidin
           hydroxylase) (Anthocyanidin synthase)
          Length = 357

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 15/143 (10%)
 Frame = +3

Query: 132 DESRTGVRGLVESGVSTVPDLFVHP-DPYASV------PLAPPGVSIPVVDLSLXXXXXX 290
           D   + V  L  SG+ST+P  ++ P D   ++           G  +P +DL        
Sbjct: 5   DSVNSRVETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNE 64

Query: 291 XXXX-------XXXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAHYGRAM 449
                          DWG  HLVN+   +      +   A +AF +LP  ++  +     
Sbjct: 65  KVRAKCREKLKKAAVDWGVMHLVNHG--ISDELMDKVRKAGKAFFDLPIEQKEKYANDQA 122

Query: 450 GGGV-SYSSNVDLYRSAAASWRD 515
            G +  Y S +    S    W D
Sbjct: 123 SGKIQGYGSKLANNASGQLEWED 145



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>FLS_MALDO (Q9XHG2) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)|
           (EC 1.14.11.9) (FLS)
          Length = 337

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
 Frame = +3

Query: 165 ESGVSTVPDLFVHPDPYASVPLAPPG--VSIPVVDLS-LXXXXXXXXXXXXXRDWGFFHL 335
           ES   T+P  F+  +          G  + +P++D S                +WG + +
Sbjct: 11  ESNEGTIPAEFIRSENEQPGITTVHGKVLEVPIIDFSDPDEEKLIVQITEASSNWGMYQI 70

Query: 336 VNYEALVPSSYPARALAAVRAFNELPAPERSAH 434
           VN++  +PS   ++  A  + F ELP  E+ A+
Sbjct: 71  VNHD--IPSEVISKLQAVGKEFFELPQEEKEAY 101



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>LDOX_ARATH (Q96323) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)|
           (Leucocyanidin oxygenase) (Leucoanthocyanidin
           hydroxylase) (Anthocyanidin synthase) (ANS)
          Length = 356

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 15/137 (10%)
 Frame = +3

Query: 150 VRGLVESGVSTVPDLFVHP-DPYASV------PLAPPGVSIPVVDLSLXXXXXXXXXXX- 305
           V  L +SG+ ++P  ++ P +   S+           G  +P +DL              
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 306 ------XXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAHYG-RAMGGGVS 464
                    DWG  HL+N+   +P+    R   A   F  L   E+  +   +A G    
Sbjct: 67  IEELKKASLDWGVMHLINHG--IPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124

Query: 465 YSSNVDLYRSAAASWRD 515
           Y S +    S    W D
Sbjct: 125 YGSKLANNASGQLEWED 141



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>HY6H_HYONI (P24397) Hyoscyamine 6-dioxygenase (EC 1.14.11.11) (Hyoscyamine|
           6-beta-hydroxylase)
          Length = 344

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 25/129 (19%), Positives = 43/129 (33%), Gaps = 9/129 (6%)
 Frame = +3

Query: 180 TVPDLFVHPDPYASVPLAPPGVSIPVVDLSLXXXXXXXXXXXXXRDWGFFHLVNYEALVP 359
           +V + F+ P    +    P G  +P++DL               +D+G F ++N+    P
Sbjct: 12  SVSESFIAPLQKRAEKDVPVGNDVPIIDLQQHHHLLVQQITKACQDFGLFQVINHG--FP 69

Query: 360 SSYPARALAAVRAFNELPAPERSAHYGRAMGGGVS---------YSSNVDLYRSAAASWR 512
                  +   + F  LPA E+     +                Y     L       W+
Sbjct: 70  EELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWK 129

Query: 513 DTIQVGFGP 539
           DT+  G  P
Sbjct: 130 DTLAHGCHP 138



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>LDOX_PETHY (P51092) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)|
           (Leucocyanidin oxygenase) (Leucoanthocyanidin
           hydroxylase)
          Length = 430

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 30/147 (20%), Positives = 47/147 (31%), Gaps = 14/147 (9%)
 Frame = +3

Query: 117 LVKAFDESRTGVRGLVESGVSTVPDLFVHPDPYAS-------VPLAPPGVSIPVVDLSLX 275
           +V A   + + V  L +SG+  +P  +V P    +             G  +P +DL   
Sbjct: 1   MVNAVVTTPSRVESLAKSGIQAIPKEYVRPQEELNGIGNIFEEEKKDEGPQVPTIDLKEI 60

Query: 276 XXXXXXXXXX------XXRDWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAHY 437
                              +WG  HLVN+   +      R   A   F + P  E+  + 
Sbjct: 61  DSEDKEIREKCHQLKKAAMEWGVMHLVNHG--ISDELINRVKVAGETFFDQPVEEKEKYA 118

Query: 438 GRAMGGGV-SYSSNVDLYRSAAASWRD 515
                G V  Y S +         W D
Sbjct: 119 NDQANGNVQGYGSKLANSACGQLEWED 145



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>FL3H_VITVI (P41090) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)|
           (Flavonone-3-hydroxylase) (F3H) (FHT)
          Length = 364

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = +3

Query: 315 DWGFFHLVNYEALVPSSYPARALAAVRAFNELPAPERSAHYGRAMG--GGVSYSSNVDLY 488
           DWG F +VN+   V S+  +      R F  LP PE +  +  + G  GG   SS+  L 
Sbjct: 67  DWGIFQVVNHG--VDSNLISEMTRLAREFFALP-PEENVRFDMSGGKKGGFIVSSH--LQ 121

Query: 489 RSAAASWRDTI 521
             A   WR+ +
Sbjct: 122 GEAVQDWREIV 132


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.131    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,510,475
Number of Sequences: 219361
Number of extensions: 730887
Number of successful extensions: 2474
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2469
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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