Clone Name | bart17f06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK099473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013024D11, full insert sequence Length = 1242 Score = 442 bits (223), Expect = e-121 Identities = 347/387 (89%), Gaps = 1/387 (0%) Strand = Plus / Plus Query: 191 cccgaggatttgttgccaatctatcaactctgctaacatgttgggagcttcctcaacgac 250 ||||||||||| |||||||||||||||||| ||| | | ||||| ||||| |||||||| Sbjct: 233 cccgaggattttttgccaatctatcaactcggctgatgtcttgggtgcttcttcaacgac 292 Query: 251 agctgacgacgcagttccacagccagttgtactgatagaccaagactcagaccgtgatgc 310 | |||| || ||| |||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 293 atctgatgatgcaattccacagccagttgttctgatagatcaagactcagaccgtgatgc 352 Query: 311 gaccattgtgcagctgagttttggagatcgtctgggggcactacttgatacgatgaaggc 370 ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 353 aaccatagtgcagctgagttttggagaccgtctgggggcactacttgacacgatgaaggc 412 Query: 371 actcaaggacctgggccttgatgtgacgaaaggaagtgtggcaactgattcatctgtcac 430 |||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| Sbjct: 413 actcaaggacctgggccttgatgtgacgaaaggaagtgtgtcaactgaatcagctgtcac 472 Query: 431 acaaacaaagttccacatcatgcgattagggcgtaaggttgaggaccctgacatgttgga 490 |||||||||||||||||||||||||| ||||| || |||||||||||||||| ||||| Sbjct: 473 acaaacaaagttccacatcatgcgatcggggcgcaaagttgaggaccctgacacattgga 532 Query: 491 aacaatacggctgaccatcattaacaacctcctgcagtatcatcccgaatcaagcga-aa 549 || |||||||| || | ||||||||||| |||||||||||||| |||||||| || || Sbjct: 533 aaagatacggctaacagttattaacaaccttctgcagtatcatcctgaatcaagtgagaa 592 Query: 550 gctagctatgggtgaattttttggaat 576 |||| |||||||||||||||||||| Sbjct: 593 tttagccatgggtgaattttttggaat 619
>dbj|AK060070.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A05, full insert sequence Length = 1212 Score = 442 bits (223), Expect = e-121 Identities = 347/387 (89%), Gaps = 1/387 (0%) Strand = Plus / Plus Query: 191 cccgaggatttgttgccaatctatcaactctgctaacatgttgggagcttcctcaacgac 250 ||||||||||| |||||||||||||||||| ||| | | ||||| ||||| |||||||| Sbjct: 196 cccgaggattttttgccaatctatcaactcggctgatgtcttgggtgcttcttcaacgac 255 Query: 251 agctgacgacgcagttccacagccagttgtactgatagaccaagactcagaccgtgatgc 310 | |||| || ||| |||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 256 atctgatgatgcaattccacagccagttgttctgatagatcaagactcagaccgtgatgc 315 Query: 311 gaccattgtgcagctgagttttggagatcgtctgggggcactacttgatacgatgaaggc 370 ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 316 aaccatagtgcagctgagttttggagaccgtctgggggcactacttgacacgatgaaggc 375 Query: 371 actcaaggacctgggccttgatgtgacgaaaggaagtgtggcaactgattcatctgtcac 430 |||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| Sbjct: 376 actcaaggacctgggccttgatgtgacgaaaggaagtgtgtcaactgaatcagctgtcac 435 Query: 431 acaaacaaagttccacatcatgcgattagggcgtaaggttgaggaccctgacatgttgga 490 |||||||||||||||||||||||||| ||||| || |||||||||||||||| ||||| Sbjct: 436 acaaacaaagttccacatcatgcgatcggggcgcaaagttgaggaccctgacacattgga 495 Query: 491 aacaatacggctgaccatcattaacaacctcctgcagtatcatcccgaatcaagcga-aa 549 || |||||||| || | ||||||||||| |||||||||||||| |||||||| || || Sbjct: 496 aaagatacggctaacagttattaacaaccttctgcagtatcatcctgaatcaagtgagaa 555 Query: 550 gctagctatgggtgaattttttggaat 576 |||| |||||||||||||||||||| Sbjct: 556 tttagccatgggtgaattttttggaat 582
>gb|BT016276.1| Zea mays clone Contig109 mRNA sequence Length = 1310 Score = 406 bits (205), Expect = e-110 Identities = 335/377 (88%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 198 atttgttgccaatctatcaactctgctaacatgttgggagcttcctcaacgacagctgac 257 ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||| Sbjct: 294 atttgttgccaatctatcaactcagctaatgtgttgggagcttcttcaacgacatctgat 353 Query: 258 gacgcagttccacagccagttgtactgatagaccaagactcagaccgtgatgcgaccatt 317 || ||||| ||| |||||||| | |||||| || |||||||||||||||||||||||| Sbjct: 354 gaggcagtcccagtcccagttgtccagatagatcaggactcagaccgtgatgcgaccatt 413 Query: 318 gtgcagctgagttttggagatcgtctgggggcactacttgatacgatgaaggcactcaag 377 |||||||| ||||||||||||||| ||||||| |||||||| |||||||| ||||||||| Sbjct: 414 gtgcagctaagttttggagatcgtttgggggcgctacttgacacgatgaaagcactcaag 473 Query: 378 gacctgggccttgatgtgacgaaaggaagtgtggcaactgattcatctgtcacacaaaca 437 ||||| ||||||||||| || |||||||||||| ||||||| ||| |||||||||||||| Sbjct: 474 gaccttggccttgatgtcacaaaaggaagtgtgacaactgactcagctgtcacacaaaca 533 Query: 438 aagttccacatcatgcgattagggcgtaaggttgaggaccctgacatgttggaaacaata 497 |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| || Sbjct: 534 aagttccacatcatgcgatttgggcgcaaggttgaggaccctgacatgttagaaaggatt 593 Query: 498 cggctgaccatcattaacaacctcctgcagtatcatcccgaatcaagcga-aagctagct 556 ||||| |||||||| |||||||| || ||||| ||||| |||||||| || ||| |||| Sbjct: 594 cggctaaccatcatcaacaaccttctccagtaccatcctgaatcaagtgagaagttagcc 653 Query: 557 atgggtgaattttttgg 573 ||||||||||||||||| Sbjct: 654 atgggtgaattttttgg 670
>gb|AY103964.1| Zea mays PCO075775 mRNA sequence Length = 1498 Score = 406 bits (205), Expect = e-110 Identities = 335/377 (88%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 198 atttgttgccaatctatcaactctgctaacatgttgggagcttcctcaacgacagctgac 257 ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||| Sbjct: 339 atttgttgccaatctatcaactcagctaatgtgttgggagcttcttcaacgacatctgat 398 Query: 258 gacgcagttccacagccagttgtactgatagaccaagactcagaccgtgatgcgaccatt 317 || ||||| ||| |||||||| | |||||| || |||||||||||||||||||||||| Sbjct: 399 gaggcagtcccagtcccagttgtccagatagatcaggactcagaccgtgatgcgaccatt 458 Query: 318 gtgcagctgagttttggagatcgtctgggggcactacttgatacgatgaaggcactcaag 377 |||||||| ||||||||||||||| ||||||| |||||||| |||||||| ||||||||| Sbjct: 459 gtgcagctaagttttggagatcgtttgggggcgctacttgacacgatgaaagcactcaag 518 Query: 378 gacctgggccttgatgtgacgaaaggaagtgtggcaactgattcatctgtcacacaaaca 437 ||||| ||||||||||| || |||||||||||| ||||||| ||| |||||||||||||| Sbjct: 519 gaccttggccttgatgtcacaaaaggaagtgtgacaactgactcagctgtcacacaaaca 578 Query: 438 aagttccacatcatgcgattagggcgtaaggttgaggaccctgacatgttggaaacaata 497 |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| || Sbjct: 579 aagttccacatcatgcgatttgggcgcaaggttgaggaccctgacatgttagaaaggatt 638 Query: 498 cggctgaccatcattaacaacctcctgcagtatcatcccgaatcaagcga-aagctagct 556 ||||| |||||||| |||||||| || ||||| ||||| |||||||| || ||| |||| Sbjct: 639 cggctaaccatcatcaacaaccttctccagtaccatcctgaatcaagtgagaagttagcc 698 Query: 557 atgggtgaattttttgg 573 ||||||||||||||||| Sbjct: 699 atgggtgaattttttgg 715
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 362 gatgaaggcactcaaggacctgggccttgatgtgacgaaaggaagtgtggcaactgattc 421 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 2596965 gatgaaggcactcaaggacctgggccttgatgtgacgaaaggaagtgtgtcaactgaatc 2596906 Query: 422 atctgtcacacaaacaaagttccacatcatgcgat 456 | ||||||||||||||||||||||||||||||||| Sbjct: 2596905 agctgtcacacaaacaaagttccacatcatgcgat 2596871 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 248 gacagctgacgacgcagttccacagccagttgtactgatagaccaagactcagaccgtga 307 |||| |||| || ||| |||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2597199 gacatctgatgatgcaattccacagccagttgttctgatagatcaagactcagaccgtga 2597140 Query: 308 tgcgaccattgtgcagctgagttttggagatcgtctgggggcactacttga 358 ||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 2597139 tgcaaccatagtgcagctgagttttggagaccgtctgggggcactacttga 2597089 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 459 gggcgtaaggttgaggaccctgacatgttggaaacaatacggctgaccatcattaacaac 518 ||||| || |||||||||||||||| ||||||| |||||||| || | ||||||||| Sbjct: 2596621 gggcgcaaagttgaggaccctgacacattggaaaagatacggctaacagttattaacaac 2596562 Query: 519 ctcctgcagtatcatcc 535 || |||||||||||||| Sbjct: 2596561 cttctgcagtatcatcc 2596545 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 195 aggatttgttgccaatctatcaactc 220 ||||||| |||||||||||||||||| Sbjct: 2597695 aggattttttgccaatctatcaactc 2597670 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 552 tagctatgggtgaattttttggaat 576 |||| |||||||||||||||||||| Sbjct: 2596399 tagccatgggtgaattttttggaat 2596375 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgccacctcccaccgccacc 120 |||||||||||||||||||| Sbjct: 9798398 cgccacctcccaccgccacc 9798417
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 362 gatgaaggcactcaaggacctgggccttgatgtgacgaaaggaagtgtggcaactgattc 421 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 2596909 gatgaaggcactcaaggacctgggccttgatgtgacgaaaggaagtgtgtcaactgaatc 2596850 Query: 422 atctgtcacacaaacaaagttccacatcatgcgat 456 | ||||||||||||||||||||||||||||||||| Sbjct: 2596849 agctgtcacacaaacaaagttccacatcatgcgat 2596815 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 248 gacagctgacgacgcagttccacagccagttgtactgatagaccaagactcagaccgtga 307 |||| |||| || ||| |||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2597143 gacatctgatgatgcaattccacagccagttgttctgatagatcaagactcagaccgtga 2597084 Query: 308 tgcgaccattgtgcagctgagttttggagatcgtctgggggcactacttga 358 ||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 2597083 tgcaaccatagtgcagctgagttttggagaccgtctgggggcactacttga 2597033 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 459 gggcgtaaggttgaggaccctgacatgttggaaacaatacggctgaccatcattaacaac 518 ||||| || |||||||||||||||| ||||||| |||||||| || | ||||||||| Sbjct: 2596565 gggcgcaaagttgaggaccctgacacattggaaaagatacggctaacagttattaacaac 2596506 Query: 519 ctcctgcagtatcatcc 535 || |||||||||||||| Sbjct: 2596505 cttctgcagtatcatcc 2596489 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 195 aggatttgttgccaatctatcaactc 220 ||||||| |||||||||||||||||| Sbjct: 2597639 aggattttttgccaatctatcaactc 2597614 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 552 tagctatgggtgaattttttggaat 576 |||| |||||||||||||||||||| Sbjct: 2596343 tagccatgggtgaattttttggaat 2596319 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgccacctcccaccgccacc 120 |||||||||||||||||||| Sbjct: 9798283 cgccacctcccaccgccacc 9798302
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Plus Query: 362 gatgaaggcactcaaggacctgggccttgatgtgacgaaaggaagtgtggcaactgattc 421 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 71044 gatgaaggcactcaaggacctgggccttgatgtgacgaaaggaagtgtgtcaactgaatc 71103 Query: 422 atctgtcacacaaacaaagttccacatcatgcgat 456 | ||||||||||||||||||||||||||||||||| Sbjct: 71104 agctgtcacacaaacaaagttccacatcatgcgat 71138 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 248 gacagctgacgacgcagttccacagccagttgtactgatagaccaagactcagaccgtga 307 |||| |||| || ||| |||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 70810 gacatctgatgatgcaattccacagccagttgttctgatagatcaagactcagaccgtga 70869 Query: 308 tgcgaccattgtgcagctgagttttggagatcgtctgggggcactacttga 358 ||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 70870 tgcaaccatagtgcagctgagttttggagaccgtctgggggcactacttga 70920 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 459 gggcgtaaggttgaggaccctgacatgttggaaacaatacggctgaccatcattaacaac 518 ||||| || |||||||||||||||| ||||||| |||||||| || | ||||||||| Sbjct: 71388 gggcgcaaagttgaggaccctgacacattggaaaagatacggctaacagttattaacaac 71447 Query: 519 ctcctgcagtatcatcc 535 || |||||||||||||| Sbjct: 71448 cttctgcagtatcatcc 71464 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 195 aggatttgttgccaatctatcaactc 220 ||||||| |||||||||||||||||| Sbjct: 70314 aggattttttgccaatctatcaactc 70339 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 tagctatgggtgaattttttggaat 576 |||| |||||||||||||||||||| Sbjct: 71610 tagccatgggtgaattttttggaat 71634
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 397 cgaaaggaagtgtggcaactgattcatctgtcacacaaacaaagttccacatcatgcgat 456 |||||||||||||||||||||||||| |||||||||| || |||||| |||||||| ||| Sbjct: 93851 cgaaaggaagtgtggcaactgattcagctgtcacacagac-aagttcgacatcatgagat 93793 Query: 457 t 457 | Sbjct: 93792 t 93792 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 305 tgatgcgaccattgtgcagctgagttttggagatcgtctgggggcactacttg 357 |||||| |||||||||||||| ||||||||||| |||||| ||||||| |||| Sbjct: 94088 tgatgcaaccattgtgcagctaagttttggagaccgtctgagggcactccttg 94036
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 397 cgaaaggaagtgtggcaactgattcatctgtcacacaaacaaagttccacatcatgcgat 456 |||||||||||||||||||||||||| |||||||||| || |||||| |||||||| ||| Sbjct: 2441754 cgaaaggaagtgtggcaactgattcagctgtcacacagac-aagttcgacatcatgagat 2441696 Query: 457 t 457 | Sbjct: 2441695 t 2441695 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 305 tgatgcgaccattgtgcagctgagttttggagatcgtctgggggcactacttg 357 |||||| |||||||||||||| ||||||||||| |||||| ||||||| |||| Sbjct: 2441991 tgatgcaaccattgtgcagctaagttttggagaccgtctgagggcactccttg 2441939
>dbj|AK066868.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013083L04, full insert sequence Length = 1118 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 397 cgaaaggaagtgtggcaactgattcatctgtcacacaaacaaagttccacatcatgcgat 456 |||||||||||||||||||||||||| |||||||||| || |||||| |||||||| ||| Sbjct: 361 cgaaaggaagtgtggcaactgattcagctgtcacacagac-aagttcgacatcatgagat 419 Query: 457 t 457 | Sbjct: 420 t 420 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 305 tgatgcgaccattgtgcagctgagttttggagatcgtctgggggcactacttg 357 |||||| |||||||||||||| ||||||||||| |||||| ||||||| |||| Sbjct: 124 tgatgcaaccattgtgcagctaagttttggagaccgtctgagggcactccttg 176
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 397 cgaaaggaagtgtggcaactgattcatctgtcacacaaacaaagttccacatcatgcgat 456 |||||||||||||||||||||||||| |||||||||| || |||||| |||||||| ||| Sbjct: 2449490 cgaaaggaagtgtggcaactgattcagctgtcacacagac-aagttcgacatcatgagat 2449432 Query: 457 t 457 | Sbjct: 2449431 t 2449431 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 305 tgatgcgaccattgtgcagctgagttttggagatcgtctgggggcactacttg 357 |||||| |||||||||||||| ||||||||||| |||||| ||||||| |||| Sbjct: 2449727 tgatgcaaccattgtgcagctaagttttggagaccgtctgagggcactccttg 2449675
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 120 ctcgtccgccccgccgccgcgg 141 |||||||||||||||||||||| Sbjct: 434985 ctcgtccgccccgccgccgcgg 434964
>ref|XM_483569.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1487 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 cccctcccaccccgcaactgc 22 ||||||||||||||||||||| Sbjct: 152 cccctcccaccccgcaactgc 132
>ref|NM_183759.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1644 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cacctcgtccgccccgccgcc 137 ||||||||||||||||||||| Sbjct: 1551 cacctcgtccgccccgccgcc 1571
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 cctcgtccgccccgccgccgcggcc 143 ||||| ||||||||||||||||||| Sbjct: 3172093 cctcgcccgccccgccgccgcggcc 3172117
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gacgccatggcgctcgccacc 107 ||||||||||||||||||||| Sbjct: 702821 gacgccatggcgctcgccacc 702801
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gacgccatggcgctcgccacc 107 ||||||||||||||||||||| Sbjct: 846458 gacgccatggcgctcgccacc 846438
>emb|AL035460.15|HS860F19 Human DNA sequence from clone RP5-860F19 on chromosome 20p12.3-13 Contains the gene for a novel protein (KIAA1442), the RPL19P1 gene for ribosomal protein L19 pseudogene 1, the CPX-1 gene for metallocarboxypeptidase, the C20orf141 gene, a novel gene and four CpG islands, complete sequence Length = 135005 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gtccgccccgccgccgcggcc 143 ||||||||||||||||||||| Sbjct: 8213 gtccgccccgccgccgcggcc 8233
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ccgccccgccgccgcggcctc 145 ||||||||||||||||||||| Sbjct: 163562 ccgccccgccgccgcggcctc 163542
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cctcgtccgccccgccgccgcggcc 143 ||||| ||||||||||||||||||| Sbjct: 1515973 cctcgcccgccccgccgccgcggcc 1515949
>dbj|AB110194.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, partial cds, clone: 22C4AG010 Length = 819 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cacctcgtccgccccgccgcc 137 ||||||||||||||||||||| Sbjct: 401 cacctcgtccgccccgccgcc 421
>tpg|BK000941.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M333, complete sequence Length = 14620 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cacctcgtccgccccgccgcc 137 ||||||||||||||||||||| Sbjct: 11140 cacctcgtccgccccgccgcc 11160
>emb|BX936285.5| Mouse DNA sequence from clone RP23-162H12 on chromosome 2, complete sequence Length = 19797 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gtccgccccgccgccgcggcc 143 ||||||||||||||||||||| Sbjct: 6738 gtccgccccgccgccgcggcc 6758
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 cccctcccaccccgcaactgc 22 ||||||||||||||||||||| Sbjct: 27024762 cccctcccaccccgcaactgc 27024782
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cacctcgtccgccccgccgcc 137 ||||||||||||||||||||| Sbjct: 12076062 cacctcgtccgccccgccgcc 12076082 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 ccacctcgtccgccccgccgccgc 139 ||||||||||| |||||||||||| Sbjct: 41893993 ccacctcgtcctccccgccgccgc 41893970 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ccaccgccacctcgtccgcc 129 |||||||||||||||||||| Sbjct: 32991317 ccaccgccacctcgtccgcc 32991336
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 cagcgccaccgcgaccgcgcc 67 ||||||||||||||||||||| Sbjct: 2421111 cagcgccaccgcgaccgcgcc 2421131
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 cccctcccaccccgcaactgc 22 ||||||||||||||||||||| Sbjct: 126162 cccctcccaccccgcaactgc 126182
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1153F04 Length = 158174 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cacctcgtccgccccgccgcc 137 ||||||||||||||||||||| Sbjct: 43002 cacctcgtccgccccgccgcc 43022
>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028G04 Length = 159761 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cacctcgtccgccccgccgcc 137 ||||||||||||||||||||| Sbjct: 121726 cacctcgtccgccccgccgcc 121746
>dbj|AK070813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073C13, full insert sequence Length = 1487 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 cccctcccaccccgcaactgc 22 ||||||||||||||||||||| Sbjct: 152 cccctcccaccccgcaactgc 132
>gb|DQ222453.1| Bos taurus 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence Length = 8675 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 106 cctcccaccgccacctcgtccgccccgccgccg 138 |||||| ||||| ||||||||||||| |||||| Sbjct: 2413 cctccccccgcctcctcgtccgcccccccgccg 2445
>emb|AJ875005.1| Rytigynia xanthotricha chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Borhidi et al. 87353 (UPS) Length = 637 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 450 gcgtcgccaccccccgatctc 470
>emb|AJ875003.1| Rytigynia uhligii chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Borhidi et al. 84458 (UPS) Length = 673 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 464 gcgtcgccaccccccgatctc 484
>emb|AJ875002.1| Rytigynia sp. Luke 9039 chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Luke 9039 (UPS) Length = 671 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 463 gcgtcgccaccccccgatctc 483
>emb|AJ875001.1| Rytigynia seyrigii chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Gereau et al. 5731 (MO) Length = 674 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 465 gcgtcgccaccccccgatctc 485
>emb|AJ875000.1| Rytigynia sambavensis chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Davis 2157 (K) Length = 668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 460 gcgtcgccaccccccgatctc 480
>emb|AJ874999.1| Rytigynia pseudolongicaudata chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Kayombo 1953 (UPS) Length = 639 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 441 gcgtcgccaccccccgatctc 461
>emb|AJ874998.1| Rytigynia parvifolia chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Luke 8345 (UPS) Length = 675 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 467 gcgtcgccaccccccgatctc 487
>emb|AJ874997.1| Rytigynia lichenoxenos chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Luke et al. 9104 (UPS) Length = 647 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 464 gcgtcgccaccccccgatctc 484
>emb|AJ874991.1| Rytigynia beniensis chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Festo 1151 (UPS) Length = 671 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 463 gcgtcgccaccccccgatctc 483
>emb|AJ874990.1| Rytigynia adenodonta chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Lantz 108 (UPS) Length = 672 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 464 gcgtcgccaccccccgatctc 484
>emb|AJ874981.1| Fadogia arenicola chloroplast ITS1, 5.8S rRNA gene and ITS2, specimen voucher Gereau et al. 6011 (UPS) Length = 670 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 462 gcgtcgccaccccccgatctc 482
>emb|AJ315101.1|RBA315101 Rytigynia bagshawei internal transcribed spacer 1 (ITS1), 5.8S rRNA gene and internal transcribed spacer 2 (ITS2) Length = 658 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 450 gcgtcgccaccccccgatctc 470
>emb|AJ315118.1|FEL315118 Fadogia elskensii internal transcribed spacer 1 (ITS1), 5.8S rRNA gene and internal transcribed spacer 2 (ITS2) Length = 653 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 458 gcgtcgccaccccccgatctc 478
>emb|AJ315100.1|FST315100 Fadogiella stigmatoloba internal transcribed spacer 1 (ITS1), 5.8S rRNA gene and internal transcribed spacer 2 (ITS2) Length = 671 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 463 gcgtcgccaccccccgatctc 483
>emb|AJ315099.1|FTE315099 Fadogia tetraquetra internal transcribed spacer 1 (ITS1), 5.8S rRNA gene and internal transcribed spacer 2 (ITS2) Length = 666 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcgtcgccaccccccgatctc 189 ||||||||||||||||||||| Sbjct: 458 gcgtcgccaccccccgatctc 478
>gb|DQ214014.1| Taeniopygia guttata clone 0058P0038E08 cytochrome b5 outer mitochondrial membrane precursor variant 1-like mRNA, complete sequence Length = 1037 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ccccgccgccgcggcctctc 147 |||||||||||||||||||| Sbjct: 56 ccccgccgccgcggcctctc 37
>ref|XM_463461.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2091 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ccaccgccacctcgtccgcc 129 |||||||||||||||||||| Sbjct: 1212 ccaccgccacctcgtccgcc 1231
>ref|XM_463749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1650 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ccacctcgtccgccccgccgccgc 139 ||||||||||| |||||||||||| Sbjct: 18 ccacctcgtcctccccgccgccgc 41
>ref|NM_003878.1| Homo sapiens gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) (GGH), mRNA Length = 1280 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 gccatggcgctcgccacctcccaccgcc 117 ||||||||||||||| |||||| ||||| Sbjct: 64 gccatggcgctcgccgcctcccgccgcc 37
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ccccgatctcacccgaggat 199 |||||||||||||||||||| Sbjct: 2878397 ccccgatctcacccgaggat 2878416
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cagcgccaccgcgaccgcgc 66 |||||||||||||||||||| Sbjct: 1671000 cagcgccaccgcgaccgcgc 1670981
>gb|BC025025.1| Homo sapiens gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase), mRNA (cDNA clone MGC:9649 IMAGE:3924620), complete cds Length = 1306 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 gccatggcgctcgccacctcccaccgcc 117 ||||||||||||||| |||||| ||||| Sbjct: 89 gccatggcgctcgccgcctcccgccgcc 62
>emb|CR376836.6| Zebrafish DNA sequence from clone CH211-190O6 in linkage group 25, complete sequence Length = 132156 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 caatctatcaactctgctaacatg 230 ||||||||||||||||||| |||| Sbjct: 102240 caatctatcaactctgctagcatg 102263
>emb|AL109976.23|HSDJ794I6 Human DNA sequence from clone RP4-794I6 on chromosome 20 Contains the 3'end of the ITPA gene for inosine triphosphatase (nucleoside triphosphate pyrophosphatase), the 3' end of the C20orf194 gene for chromosome 20 open reading frame 194, the SLC4A11 gene for solute carrier family 4, sodium bicarbonate transporter-like 1, member 11 (bicarbonate transporter related protein 1, BTR1) and two CpG islands, complete sequence Length = 119071 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 catcattaacaacctcctgc 525 |||||||||||||||||||| Sbjct: 91104 catcattaacaacctcctgc 91085
>emb|CR848688.1| Pseudomonas aeruginosa strain MA genomic island Length = 15455 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 acgatgaaggcactcaaggacctg 383 ||||||||||||| |||||||||| Sbjct: 3449 acgatgaaggcacccaaggacctg 3426
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cagcgccaccgcgaccgcgc 66 |||||||||||||||||||| Sbjct: 186511 cagcgccaccgcgaccgcgc 186530
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cagcgccaccgcgaccgcgc 66 |||||||||||||||||||| Sbjct: 189958 cagcgccaccgcgaccgcgc 189977
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cagcgccaccgcgaccgcgc 66 |||||||||||||||||||| Sbjct: 157891 cagcgccaccgcgaccgcgc 157872
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gcggcctctcgcgtgccgctgcgc 161 ||||||||| |||||||||||||| Sbjct: 333740 gcggcctctggcgtgccgctgcgc 333763
>gb|AC120042.3| Homo sapiens chromosome 8, clone RP11-659E9, complete sequence Length = 170940 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 90 gccatggcgctcgccacctcccaccgcc 117 ||||||||||||||| |||||| ||||| Sbjct: 101481 gccatggcgctcgccgcctcccgccgcc 101508
>gb|AC019357.7| Homo sapiens chromosome 8, clone RP11-687A13, complete sequence Length = 181694 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 90 gccatggcgctcgccacctcccaccgcc 117 ||||||||||||||| |||||| ||||| Sbjct: 154696 gccatggcgctcgccgcctcccgccgcc 154723
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cctcgtccgccccgccgccgcggc 142 |||||||||||| ||||||||||| Sbjct: 86469 cctcgtccgcccggccgccgcggc 86492
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gccatggcgctcgccacctc 109 |||||||||||||||||||| Sbjct: 11471027 gccatggcgctcgccacctc 11471046
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 atagaccaagactcagaccg 304 |||||||||||||||||||| Sbjct: 2610340 atagaccaagactcagaccg 2610321
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cgccatggcgctcgccacct 108 |||||||||||||||||||| Sbjct: 23544617 cgccatggcgctcgccacct 23544636
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cctcgtccgccccgccgccgcggc 142 |||||||||||| ||||||||||| Sbjct: 29276161 cctcgtccgcccggccgccgcggc 29276138
>emb|BX815638.1|CNS0ABCM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS79ZG04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1364 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 tagaccaagactcagaccgtgatg 309 ||||||||||||||||| |||||| Sbjct: 1363 tagaccaagactcagacagtgatg 1340
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 ccacctcgtccgccccgccgccgc 139 ||||||||||| |||||||||||| Sbjct: 137369 ccacctcgtcctccccgccgccgc 137346
>gb|AC093732.3| Homo sapiens BAC clone RP11-15I20 from 2, complete sequence Length = 133209 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gttgtactgatagaccaaga 295 |||||||||||||||||||| Sbjct: 29250 gttgtactgatagaccaaga 29269
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 atagaccaagactcagaccg 304 |||||||||||||||||||| Sbjct: 65681 atagaccaagactcagaccg 65662
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 atagaccaagactcagaccg 304 |||||||||||||||||||| Sbjct: 22087 atagaccaagactcagaccg 22068
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ccaccgccacctcgtccgcc 129 |||||||||||||||||||| Sbjct: 57545 ccaccgccacctcgtccgcc 57564
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1120F06 Length = 186712 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gccatggcgctcgccacctc 109 |||||||||||||||||||| Sbjct: 34685 gccatggcgctcgccacctc 34704
>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446G09 Length = 146898 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gccatggcgctcgccacctc 109 |||||||||||||||||||| Sbjct: 80547 gccatggcgctcgccacctc 80566
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cctcgtccgccccgccgccgcggc 142 |||||||||||| ||||||||||| Sbjct: 73506 cctcgtccgcccggccgccgcggc 73483
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cctcgtccgccccgccgccgcggc 142 |||||||||||| ||||||||||| Sbjct: 166129 cctcgtccgcccggccgccgcggc 166106
>dbj|AK121676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068N04, full insert sequence Length = 2415 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ccaccgccacctcgtccgcc 129 |||||||||||||||||||| Sbjct: 1299 ccaccgccacctcgtccgcc 1318
>gb|AF147081.1|HSGGH1 Homo sapiens gamma-glutamyl hydrolase gene, exons 1 and 2 Length = 8936 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 gccatggcgctcgccacctcccaccgcc 117 ||||||||||||||| |||||| ||||| Sbjct: 2142 gccatggcgctcgccgcctcccgccgcc 2115
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 cccaccgccacctcgtccgccccg 132 |||||||||||||||| ||||||| Sbjct: 370706 cccaccgccacctcgtgcgccccg 370683
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ccaccgccacctcgtccgcc 129 |||||||||||||||||||| Sbjct: 1523867 ccaccgccacctcgtccgcc 1523886
>emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa0054I14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148089 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgccacctcccaccgccacc 120 |||||||||||||||||||| Sbjct: 124355 cgccacctcccaccgccacc 124374
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgccacctcccaccgccacc 120 |||||||||||||||||||| Sbjct: 134072 cgccacctcccaccgccacc 134053
>gb|U55206.1|HSU55206 Homo sapiens human gamma-glutamyl hydrolase (hGH) mRNA, complete cds Length = 1280 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 gccatggcgctcgccacctcccaccgcc 117 ||||||||||||||| |||||| ||||| Sbjct: 64 gccatggcgctcgccgcctcccgccgcc 37
>gb|AC126451.3| Mus musculus BAC clone RP23-194O23 from 8, complete sequence Length = 222274 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cccaccccgcaactgcctac 26 |||||||||||||||||||| Sbjct: 160648 cccaccccgcaactgcctac 160629
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cgccatggcgctcgccacct 108 |||||||||||||||||||| Sbjct: 81789 cgccatggcgctcgccacct 81808
>emb|AL807801.3| Mouse DNA sequence from clone RP23-235A15 on chromosome 2, complete sequence Length = 158498 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ccccctcccaccccgcaact 20 |||||||||||||||||||| Sbjct: 9836 ccccctcccaccccgcaact 9855 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,085,402 Number of Sequences: 3902068 Number of extensions: 4085402 Number of successful extensions: 83189 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81327 Number of HSP's gapped (non-prelim): 1858 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)