ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart17e09 |
|---|---|
| Clone Library Name | barley_pub |
>IAG2_RAT (O35777) Implantation-associated protein| Length = 335 Score = 37.7 bits (86), Expect = 0.022 Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%) Frame = +2 Query: 140 VVHLTDTSVTRFLSSASRPYSVLVFFDATSLHSKTDLHLPQLRREFALLSASFHANNPDS 319 V+ + + + R YSV+V F A LH + + Q EF +L+ + ++ + Sbjct: 53 VIRMNGDKFRPLVKAPPRNYSVIVMFTALQLHRQC-VVCKQADEEFQILANFWRYSSAFT 111 Query: 320 SDLFFADIXXXXXXXXXXXXGVNSLPHVRLIRPE-HSRLADSEQMDQSHFSRLADSMVEF 496 + +FFA + +NS P P+ + AD+ ++ FS A+ + + Sbjct: 112 NRIFFAMVDFDEGSDVFQMLNMNSAPTFINFPPKGKPKRADTYELQVRGFS--AEQIARW 169 Query: 497 VEARTGLEVGPIVRPP 544 + RT + + ++RPP Sbjct: 170 IADRTDVNI-RVIRPP 184
>CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9| Length = 531 Score = 32.0 bits (71), Expect = 1.2 Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 23/94 (24%) Frame = -2 Query: 444 SESARRECSGRMRRTWGRELTPNWEKECCDSEN-----------------SMSAKKRSEE 316 SE RRE S R R WG P++E+ C E+ SM+ ++RSE Sbjct: 208 SERDRREESRRHGRNWG---GPDFERVRCGLEHERQGRRAGLGSAGDMTLSMTGRERSE- 263 Query: 315 SGLLAWK------EAERSANSRRSWGRWRSVLEW 232 L WK + ER R+ G+WR EW Sbjct: 264 --YLRWKQEREKIDQERLQRHRKPTGQWRR--EW 293
>K1949_MOUSE (Q8BQ30) Protein KIAA1949 homolog| Length = 594 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 3/91 (3%) Frame = -2 Query: 525 PTSRPVRASTNSTMESARR---EKWDWSICSESARRECSGRMRRTWGRELTPNWEKECCD 355 P ++ V+ T+S +E+A + E W W++ S AR R TW + + + Sbjct: 289 PVTKEVQDITSSEVETAEQRPTESWKWTLNSGKARE------RTTW------DIDTQTQK 336 Query: 354 SENSMSAKKRSEESGLLAWKEAERSANSRRS 262 + S++K SG+ A +EAE+ +S Sbjct: 337 PDPPASSEKHPGPSGMEAEEEAEKEEAEAQS 367
>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 30.8 bits (68), Expect = 2.7 Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 3/92 (3%) Frame = -2 Query: 357 DSENSMSAKKRSEESGLLAWKEAERSANSRRSWGRWR---SVLEWSEVASKKTRTE*GRE 187 D++ S +R E W ER + R W R R S +W + + RE Sbjct: 2104 DAQGRASEDRRRERERGRNWSR-ERDWDRPREWDRHRDKDSSRDWDRNRERSANRDRERE 2162 Query: 186 ADERKRVTEVSVRWTTPEGERERRDWSSPTRS 91 AD K R E ER+RR +RS Sbjct: 2163 ADRGKEWDRSRERSRNRERERDRRRDRDRSRS 2194
>YO13_CAEEL (P34669) Hypothetical protein ZK686.3 in chromosome III| Length = 331 Score = 30.8 bits (68), Expect = 2.7 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%) Frame = +2 Query: 191 RPYSVLVFFDATSLHSKTDLHLPQLRREFALLSAS--FHANNPDSSDLFFADIXXXXXXX 364 R YS++V F A S + + P EF +++ S + ++ D +FF + Sbjct: 47 RNYSMIVMFTALSPGVQCPICKPAYD-EFMIVANSHRYTSSEGDRRKVFFGIVDYEDAPQ 105 Query: 365 XXXXXGVNSLPHVRLIRPEHSRLADSEQMDQSHFSRLADSMVEFVEARTGLEVGPIVRPP 544 +N+ P + P+ EQMD AD++ FV +T + V ++RPP Sbjct: 106 IFQQMNLNTAPILYHFGPKLGAKKRPEQMDFQRQGFDADAIGRFVADQTEVHV-RVIRPP 164
>MOG1_CAEEL (P34498) Probable pre-mRNA-splicing factor ATP-dependent RNA| helicase mog-1 (EC 3.6.1.-) (Sex determination protein mog-1) (Masculinization of germ line protein 1) Length = 1131 Score = 30.4 bits (67), Expect = 3.5 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 4/99 (4%) Frame = -2 Query: 372 EKECCDSENSMSAKKRSEESGLLAWKEAERSANSRRSW----GRWRSVLEWSEVASKKTR 205 EK + M K R ++ + R +SRR W G + + S+ + Sbjct: 80 EKHRDRDDRGMKYKSRDDDRRRDRDRSERREPSSRRGWKDRSGDQTPRFKVPDTPSRMSW 139 Query: 204 TE*GREADERKRVTEVSVRWTTPEGERERRDWSSPTRSL 88 + RE RKR S TP GER+R+ + RS+ Sbjct: 140 DQDDREGSSRKRN---SWDMPTPRGERDRKRYMDSERSI 175
>TINY_ARATH (Q39127) Transcriptional factor TINY| Length = 218 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = -2 Query: 390 ELTPNWEKECCDSENSMSAKKRSEESGLLAWKEAERSANSRRSWGRWRS 244 E T +WE EN KK ++SG K +R+WG+W S Sbjct: 5 ESTKSWEASAVRQENEEEKKKPVKDSG----KHPVYRGVRKRNWGKWVS 49
>MYRIP_HUMAN (Q8NFW9) Rab effector MyRIP (Myosin-VIIa- and Rab-interacting| protein) (Exophilin-8) (Slp homolog lacking C2 domains c) Length = 859 Score = 30.0 bits (66), Expect = 4.6 Identities = 40/164 (24%), Positives = 61/164 (37%), Gaps = 25/164 (15%) Frame = -2 Query: 504 ASTNSTMESARREKWDWS-----ICSES-------------ARRECSGRMRRTWGRELTP 379 AS M S E +DWS +C S A+ G + + L+P Sbjct: 387 ASAYDEMGSDSEEDFDWSEALSKLCPRSRALPRNPQPQPTQAQSSDQGPIAASPSSALSP 446 Query: 378 NWEKECCDSENSMSAKKRS-EESGLLAWKEAERSANSRRSWGRWRSVLEWS---EVASKK 211 N E C DSE S + R L+W + + N R L+ + ++AS++ Sbjct: 447 NPEAMCSDSETSSAGSSREVGHQARLSWLQRKAPRNPAAEKMRLHGELDVNFNPQLASRE 506 Query: 210 TRTE*GREADERKRVTEVSV-RWTTPE--GERERRDWSSPTRSL 88 T E +E T+ RW E ++ SSP+ L Sbjct: 507 TSD--SSEPEEAPHTTDRRARRWRRARLGSEEPSKEPSSPSAQL 548
>UROL1_HUMAN (Q5DID0) Uromodulin-like 1 precursor (Olfactorin)| Length = 1318 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -2 Query: 543 GGRTMGPTSRPVRASTNSTMESARREKWDWSICSESARRECS 418 G T+ P +P+ AST ++ DW C +SA +CS Sbjct: 479 GISTLAPILQPLLASTVFQIDRQGTRVQDWDECVDSAEHDCS 520
>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 6.0 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = -2 Query: 354 SENSMSAKKRS-EESGLLAWKEAERSANS--RRSWGRWRSVLEWSEVASKKTRTE*GREA 184 S + M A++R+ EE+ + +E R+ RR+ R E E A ++ E +A Sbjct: 152 SRSEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEHEESARRQAEEEARLKA 211 Query: 183 D---ERKRVTEVSVRWTTPEGERERRDWSSP 100 + RK E + R PE ERRD + P Sbjct: 212 EAEARRKAEEEAAKRMPQPEARSERRDDARP 242
>PININ_MOUSE (O35691) Pinin| Length = 725 Score = 29.3 bits (64), Expect = 7.9 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 7/98 (7%) Frame = -2 Query: 534 TMGPTSRPVRASTNSTMESARREKWDWSICSESARRECSGRMRRTWGRELT-------PN 376 T G +SR +ST+S+ ES R + RR + R T G E + + Sbjct: 621 TSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSMDRKRRDTSGLERSHKSSKGGSS 680 Query: 375 WEKECCDSENSMSAKKRSEESGLLAWKEAERSANSRRS 262 +++ ++S +KRS + K + RS R+S Sbjct: 681 RDRKGSKDKSSRPDRKRSISESSRSGKRSSRSERDRKS 718
>TBC14_HUMAN (Q9P2M4) TBC1 domain family member 14| Length = 678 Score = 29.3 bits (64), Expect = 7.9 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = -2 Query: 510 VRASTNSTMESARREKWDWSICSESARRECSGRMRRTWGRELTPNWEKECC 358 V+A E+ RR+K C E G TW E+ PNWE C Sbjct: 328 VQAKKRELKEAQRRKKQLEERCRVE---ESIGNAVLTWNNEILPNWETMWC 375
>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 7.9 Identities = 27/79 (34%), Positives = 34/79 (43%) Frame = -2 Query: 336 AKKRSEESGLLAWKEAERSANSRRSWGRWRSVLEWSEVASKKTRTE*GREADERKRVTEV 157 AK+R+EE A KE E SA + E A K E R+A+E E Sbjct: 181 AKRRAEEDARRA-KEREESARRQAE-----------EEARLKAEAEARRKAEE-----EA 223 Query: 156 SVRWTTPEGERERRDWSSP 100 + R PE ERRD + P Sbjct: 224 AKRMPQPEARSERRDDARP 242
>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 7.9 Identities = 27/79 (34%), Positives = 34/79 (43%) Frame = -2 Query: 336 AKKRSEESGLLAWKEAERSANSRRSWGRWRSVLEWSEVASKKTRTE*GREADERKRVTEV 157 AK+R+EE A KE E SA + E A K E R+A+E E Sbjct: 181 AKRRAEEDARRA-KEREESARRQAE-----------EEARLKAEAEARRKAEE-----EA 223 Query: 156 SVRWTTPEGERERRDWSSP 100 + R PE ERRD + P Sbjct: 224 AKRMPQPEARSERRDDARP 242
>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 7.9 Identities = 27/79 (34%), Positives = 34/79 (43%) Frame = -2 Query: 336 AKKRSEESGLLAWKEAERSANSRRSWGRWRSVLEWSEVASKKTRTE*GREADERKRVTEV 157 AK+R+EE A KE E SA + E A K E R+A+E E Sbjct: 181 AKRRAEEDARRA-KEREESARRQAE-----------EEARLKAEAEARRKAEE-----EA 223 Query: 156 SVRWTTPEGERERRDWSSP 100 + R PE ERRD + P Sbjct: 224 AKRMPQPEARSERRDDARP 242 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.141 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,148,271 Number of Sequences: 219361 Number of extensions: 494498 Number of successful extensions: 1664 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1624 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1663 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
